ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf157l10 |
|---|---|
| Clone Library Name | barley_pub |
>AK105134:Os10g0471300 | Length = 168 Score = 278 bits (712), Expect = 2e-75 Identities = 138/163 (84%), Positives = 148/163 (90%) Frame = +2 Query: 104 GASAAAVVPRLLAAKAESGKSFSDIAAETGLTNVYVAQLLRRQAQLKPDMAPKLRAAVPA 283 G AA VV RL+AAKAES KSFS+I E GLTNVYVAQLLRRQAQLKP+ AP LRAAVP Sbjct: 6 GERAAGVVRRLMAAKAESRKSFSEIGEEAGLTNVYVAQLLRRQAQLKPETAPALRAAVPG 65 Query: 284 LTDELLELMMRPPFRSYHPDIVHEPAIYRLNEAVMHFGESIKEIINEDFGDGIMSAIDFY 463 LTD+L+ LMM PPFRSYHPDIVHEPAIYRLNEAVMHFGESIKEIINE+FGDGIMSAIDFY Sbjct: 66 LTDDLVALMMEPPFRSYHPDIVHEPAIYRLNEAVMHFGESIKEIINEEFGDGIMSAIDFY 125 Query: 464 CSVDKIQGADGKERVVVTFDGKYLPYTEQRSEHMMSRLTRNAS 592 CSVDK+QGADGK+RVVVTFDGKYLPY+EQRS+HMMSRLTR S Sbjct: 126 CSVDKVQGADGKDRVVVTFDGKYLPYSEQRSDHMMSRLTRKTS 168
>AK071747:Os12g0609500 | Length = 323 Score = 33.5 bits (75), Expect = 0.17 Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 7/79 (8%) Frame = +2 Query: 14 PCLTIP-----PPRFRRAPRGQNRQPATGQIMEESGA-SAAAVVPRLLAAKAESGKSFSD 175 P +T P PP R P +NR A G M + +AAA R + A SG S Sbjct: 14 PAITAPVRLASPPNRREHPEEENRIEARGGAMATARTLAAAAAAARAFSLTATSGGGVSM 73 Query: 176 I-AAETGLTNVYVAQLLRR 229 + A G+ +V QLL+R Sbjct: 74 VQGASRGIGLEFVRQLLKR 92
>AK104861:Os04g0379400 | Length = 163 Score = 31.6 bits (70), Expect = 0.63 Identities = 19/48 (39%), Positives = 22/48 (45%) Frame = +2 Query: 29 PPPRFRRAPRGQNRQPATGQIMEESGASAAAVVPRLLAAKAESGKSFS 172 PPPR RRAP R + G A AAA P + A AE + S Sbjct: 18 PPPRPRRAPPSAARLASNGIAFVTVAAVAAASPPAIAALAAEPANALS 65
>AK065013:Os04g0379400 | Length = 163 Score = 31.6 bits (70), Expect = 0.63 Identities = 19/48 (39%), Positives = 22/48 (45%) Frame = +2 Query: 29 PPPRFRRAPRGQNRQPATGQIMEESGASAAAVVPRLLAAKAESGKSFS 172 PPPR RRAP R + G A AAA P + A AE + S Sbjct: 18 PPPRPRRAPPSAARLASNGIAFVTVAAVAAASPPAIAALAAEPANALS 65
>AK110707:Os02g0774500 | Length = 286 Score = 30.0 bits (66), Expect = 1.8 Identities = 18/45 (40%), Positives = 26/45 (57%) Frame = +2 Query: 32 PPRFRRAPRGQNRQPATGQIMEESGASAAAVVPRLLAAKAESGKS 166 PPRF+R+P + RQP T ++ +G + AA P A A S +S Sbjct: 44 PPRFKRSPHRKKRQPRTRRV--AAGETIAAGKPPHPACTAVSLQS 86
>AK108344:Os01g0862600 | Length = 219 Score = 30.0 bits (66), Expect = 1.8 Identities = 25/89 (28%), Positives = 35/89 (39%), Gaps = 6/89 (6%) Frame = +2 Query: 8 PLPCLTIPPPRF------RRAPRGQNRQPATGQIMEESGASAAAVVPRLLAAKAESGKSF 169 PLP L PP RR+P ++ S A+AAA PRL+ + Sbjct: 71 PLPRLRRPPEGILDALPERRSPFSPPPSSSSNSSTTASPAAAAAAPPRLIPTIPRPAAAL 130 Query: 170 SDIAAETGLTNVYVAQLLRRQAQLKPDMA 256 + ++ NV VAQ R + D A Sbjct: 131 APHIPQSAPVNVPVAQFRRLSVEALMDKA 159
>AK069152:Os10g0409500 | Length = 192 Score = 30.0 bits (66), Expect = 1.8 Identities = 21/73 (28%), Positives = 31/73 (42%) Frame = -3 Query: 222 NSCAT*TLVSPVSAAMSEKLFPDSAFAANSRGTTAAALAPLSSMICPVAGCLFCPRGARR 43 N AT L+S SA ++ R T AA +A ++++ CP G Sbjct: 82 NIAATDVLLSFTSAC-------NTLLLKELRITNAAKVAAATALVASATSGSSCPLGGNA 134 Query: 42 NRGGGMVRHGSGS 4 + GGG + G GS Sbjct: 135 SSGGGGLSRGGGS 147
>AK066654:Os10g0409500 | Length = 227 Score = 30.0 bits (66), Expect = 1.8 Identities = 21/73 (28%), Positives = 31/73 (42%) Frame = -3 Query: 222 NSCAT*TLVSPVSAAMSEKLFPDSAFAANSRGTTAAALAPLSSMICPVAGCLFCPRGARR 43 N AT L+S SA ++ R T AA +A ++++ CP G Sbjct: 71 NIAATDVLLSFTSAC-------NTLLLKELRITNAAKVAAATALVASATSGSSCPLGGNA 123 Query: 42 NRGGGMVRHGSGS 4 + GGG + G GS Sbjct: 124 SSGGGGLSRGGGS 136
>Os08g0422700:Os08g0422700 | Length = 108 Score = 28.9 bits (63), Expect = 4.1 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = +3 Query: 129 LGCWRRRRNPGKASQTSRPRRGLPTSTLRSCCAARRSL 242 + C RRR + G S RR LP + R AARR L Sbjct: 7 MACSRRRGDRGSRRMASSRRRRLPAARPRQLPAARRRL 44
>AY323478:Os03g0182800 | Length = 326 Score = 28.9 bits (63), Expect = 4.1 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 7/56 (12%) Frame = +2 Query: 38 RFRRAPRGQNRQPATGQIMEESGASAAAVVPRLLAAK-------AESGKSFSDIAA 184 + ++ PR + AT ++MEE +S+ +VP +A + AE + +IAA Sbjct: 243 KIKQCPRDEQMASATPELMEEDASSSRNMVPLSMALQLQYAAMIAECDREMEEIAA 298
>AK109594:Os01g0881800 | Length = 368 Score = 28.9 bits (63), Expect = 4.1 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = +3 Query: 135 CWRRRRNPGKASQTSRPRRGLPTSTLRSCCAARR 236 C RR + G A+ T R R P+S + CA+RR Sbjct: 61 CERRDGDAGVAAATCRSSRARPSSPYPAACASRR 94
>AK107106:Os03g0383100 | Length = 478 Score = 28.9 bits (63), Expect = 4.1 Identities = 20/54 (37%), Positives = 26/54 (48%) Frame = -2 Query: 343 VRVVGPERRPHHELQELVGERRDGRPELGRHVGLKLRLAAQQLRNVDVGKPRLG 182 V V GPE RP EL RDG E G H+ ++ L + L V+ R+G Sbjct: 340 VDVAGPEPRPGEEL-------RDGAVEAGVHLVDRIPLGGELLAAVEEVPRRVG 386
>AK100276:Os01g0885200 | Length = 397 Score = 28.9 bits (63), Expect = 4.1 Identities = 18/49 (36%), Positives = 26/49 (53%) Frame = -1 Query: 704 HARKAIIHFFFKSKVESGNTTICYHMNIHPLRSTSHLKMHCGSILTSYV 558 H RK I +F ++ + G+T IC +PL T L + +IL SYV Sbjct: 170 HGRKKIAKYFIRTSMPVGDTNIC----TYPLFGTIFLGL-IDAILMSYV 213
>AK100169:Os06g0486000 | Length = 748 Score = 28.9 bits (63), Expect = 4.1 Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 2/87 (2%) Frame = -3 Query: 258 GAMSGLSCAWRRNSCAT*TLVSPVSAAMSEKLFPDSAFAANSRGTTAAALA--PLSSMIC 85 GA+S + RNS A S S + + S A+S G AAA+A ++ ++C Sbjct: 257 GAISSTNFPGGRNSTAG---SSNTSLSQQQHTTVSSTAQASSSGHIAAAIAGAAVTGLLC 313 Query: 84 PVAGCLFCPRGARRNRGGGMVRHGSGS 4 + R+ + G+V H G+ Sbjct: 314 AIVAIYLIVSSRRKKKMDGLVYHYDGN 340
>AK073133:Os03g0182800 | Length = 326 Score = 28.9 bits (63), Expect = 4.1 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 7/56 (12%) Frame = +2 Query: 38 RFRRAPRGQNRQPATGQIMEESGASAAAVVPRLLAAK-------AESGKSFSDIAA 184 + ++ PR + AT ++MEE +S+ +VP +A + AE + +IAA Sbjct: 243 KIKQCPRDEQMASATPELMEEDASSSRNMVPLSMALQLQYAAMIAECDREMEEIAA 298
>AK059113:Os01g0885200 | Length = 296 Score = 28.9 bits (63), Expect = 4.1 Identities = 18/49 (36%), Positives = 26/49 (53%) Frame = -1 Query: 704 HARKAIIHFFFKSKVESGNTTICYHMNIHPLRSTSHLKMHCGSILTSYV 558 H RK I +F ++ + G+T IC +PL T L + +IL SYV Sbjct: 69 HGRKKIAKYFIRTSMPVGDTNIC----TYPLFGTIFLGL-IDAILMSYV 112
>AJ304840:Os03g0182800 | Length = 326 Score = 28.9 bits (63), Expect = 4.1 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 7/56 (12%) Frame = +2 Query: 38 RFRRAPRGQNRQPATGQIMEESGASAAAVVPRLLAAK-------AESGKSFSDIAA 184 + ++ PR + AT ++MEE +S+ +VP +A + AE + +IAA Sbjct: 243 KIKQCPRDEQMASATPELMEEDASSSRNMVPLSMALQLQYAAMIAECDREMEEIAA 298
>Os12g0429800:Os12g0429800 | Length = 288 Score = 28.5 bits (62), Expect = 5.4 Identities = 19/61 (31%), Positives = 27/61 (44%) Frame = +2 Query: 2 RDPLPCLTIPPPRFRRAPRGQNRQPATGQIMEESGASAAAVVPRLLAAKAESGKSFSDIA 181 R PL L PPP P ++ P ES A+AAAV+ A+ E +++ Sbjct: 38 RPPLASLQPPPPPLPPLPGKRSSDPVEAN--RESAAAAAAVLEEETGAREEEEGYVANVG 95 Query: 182 A 184 A Sbjct: 96 A 96
>Os07g0431000:Os07g0431000 | Length = 1869 Score = 28.5 bits (62), Expect = 5.4 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = +2 Query: 38 RFRRAPRGQNRQPATGQIMEESGASAAAVVPRLLAAK 148 R R PR QN P T Q++ E AS PR + + Sbjct: 992 RSSRNPRSQNIWPTTVQVIREVDASGRPTAPRTVIGR 1028
>AK100674:Os09g0474800 | Length = 660 Score = 28.5 bits (62), Expect = 5.4 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 2/54 (3%) Frame = -2 Query: 544 GVRQILPIKCDHHTFFSISPLNLVNRTVEVYSRHDSVA--KILIDDFLDALSKM 389 G+R++ DH F ++ P LV T V++ +D+V+ + + L A+SK+ Sbjct: 223 GLREVAAYLLDHDNFANVPPTMLVKITHSVFNVNDTVSCKSKVFHNKLQAVSKL 276
>AK067883:Os08g0103500 | Length = 411 Score = 28.5 bits (62), Expect = 5.4 Identities = 16/36 (44%), Positives = 19/36 (52%) Frame = +2 Query: 29 PPPRFRRAPRGQNRQPATGQIMEESGASAAAVVPRL 136 PPP R+AP G A G SGA A V+P+L Sbjct: 361 PPPSPRKAPSGGKGTSAGGS-SSSSGAMARVVLPKL 395
>AK066715:Os09g0474800 | Length = 660 Score = 28.5 bits (62), Expect = 5.4 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 2/54 (3%) Frame = -2 Query: 544 GVRQILPIKCDHHTFFSISPLNLVNRTVEVYSRHDSVA--KILIDDFLDALSKM 389 G+R++ DH F ++ P LV T V++ +D+V+ + + L A+SK+ Sbjct: 223 GLREVAAYLLDHDNFANVPPTMLVKITHSVFNVNDTVSCKSKVFHNKLQAVSKL 276
>AK060348:Os08g0103500 | Length = 411 Score = 28.5 bits (62), Expect = 5.4 Identities = 16/36 (44%), Positives = 19/36 (52%) Frame = +2 Query: 29 PPPRFRRAPRGQNRQPATGQIMEESGASAAAVVPRL 136 PPP R+AP G A G SGA A V+P+L Sbjct: 361 PPPSPRKAPSGGKGTSAGGS-SSSSGAMARVVLPKL 395
>AK121620:Os03g0793500 | Length = 707 Score = 28.1 bits (61), Expect = 7.0 Identities = 25/85 (29%), Positives = 34/85 (40%), Gaps = 1/85 (1%) Frame = -2 Query: 328 PERRPHHELQELVGERRDGRPELGR-HVGLKLRLAAQQLRNVDVGKPRLGRDV*EAFPGF 152 PER E + +R+ G+ G+ +VG R V G R G D E F Sbjct: 136 PERVQVGNSPEYITDRKLGKGGFGQVYVG----------RRVSGGGSRTGPDAQEVALKF 185 Query: 151 RLRRQQPRNYGRRARAALLHDLSGC 77 R + NYG + H L+GC Sbjct: 186 EHRSSKGCNYGPPYEWQVYHTLNGC 210
>AK120126:Os03g0629900 | Length = 248 Score = 28.1 bits (61), Expect = 7.0 Identities = 17/43 (39%), Positives = 20/43 (46%) Frame = -3 Query: 210 T*TLVSPVSAAMSEKLFPDSAFAANSRGTTAAALAPLSSMICP 82 T T+V P SA + PD A SR T AP S +CP Sbjct: 116 TGTMVVPSSAGPVPGIAPDGAEVIPSRCRTLPQPAPTSHEVCP 158
>AK103407:Os03g0793500 | Length = 707 Score = 28.1 bits (61), Expect = 7.0 Identities = 25/85 (29%), Positives = 34/85 (40%), Gaps = 1/85 (1%) Frame = -2 Query: 328 PERRPHHELQELVGERRDGRPELGR-HVGLKLRLAAQQLRNVDVGKPRLGRDV*EAFPGF 152 PER E + +R+ G+ G+ +VG R V G R G D E F Sbjct: 136 PERVQVGNSPEYITDRKLGKGGFGQVYVG----------RRVSGGGSRTGPDAQEVALKF 185 Query: 151 RLRRQQPRNYGRRARAALLHDLSGC 77 R + NYG + H L+GC Sbjct: 186 EHRSSKGCNYGPPYEWQVYHTLNGC 210
>AK102709:Os10g0572300 | Length = 543 Score = 28.1 bits (61), Expect = 7.0 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Frame = -1 Query: 731 RCFVYLSVIHARKAIIHFFFKSKVESGNTTICYHMN-IHPLRSTSHLKMHCGSILTSYVQ 555 RC L V HA + + F + V+ G + +MN ++ R T+ K GS T Sbjct: 469 RCLSRLRVFHADETPLEFPPREVVKLGAQAVVKYMNDLNAARGTNQKKTDRGSFWTWLFS 528 Query: 554 ISARCK 537 + CK Sbjct: 529 LFGCCK 534
>AK071766:Os02g0678400 | Length = 203 Score = 28.1 bits (61), Expect = 7.0 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = +2 Query: 14 PCLTIPPPRFRRAPRGQNRQPATGQI-MEESGASAAAVVPR 133 P PPPR RR PR + R ++ SGA +A+ PR Sbjct: 43 PTAPPPPPRSRRRPRSRRRTSSSSTAGPGGSGACSASSAPR 83
>AK065479:Os10g0572300 | Length = 409 Score = 28.1 bits (61), Expect = 7.0 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Frame = -1 Query: 731 RCFVYLSVIHARKAIIHFFFKSKVESGNTTICYHMN-IHPLRSTSHLKMHCGSILTSYVQ 555 RC L V HA + + F + V+ G + +MN ++ R T+ K GS T Sbjct: 335 RCLSRLRVFHADETPLEFPPREVVKLGAQAVVKYMNDLNAARGTNQKKTDRGSFWTWLFS 394 Query: 554 ISARCK 537 + CK Sbjct: 395 LFGCCK 400
>Os01g0967400:Os01g0967400 | Length = 144 Score = 27.7 bits (60), Expect = 9.2 Identities = 14/20 (70%), Positives = 16/20 (80%) Frame = +3 Query: 474 TRFKGLMEKNVWWSHLMGSI 533 TR+ LMEK VW SHLMG+I Sbjct: 84 TRYMVLMEKIVW-SHLMGNI 102
>AY434735:Os02g0820900 | Length = 836 Score = 27.7 bits (60), Expect = 9.2 Identities = 24/53 (45%), Positives = 29/53 (54%) Frame = -2 Query: 337 VVGPERRPHHELQELVGERRDGRPELGRHVGLKLRLAAQQLRNVDVGKPRLGR 179 VVG ERR H L +VG GR E G HV L++R A + DV RLG+ Sbjct: 559 VVGDERRIFHVLLHMVG-NLIGRTEPG-HVTLRVRAA-----DDDVLDDRLGQ 604
>AK111581:Os02g0820900 | Length = 549 Score = 27.7 bits (60), Expect = 9.2 Identities = 24/53 (45%), Positives = 29/53 (54%) Frame = -2 Query: 337 VVGPERRPHHELQELVGERRDGRPELGRHVGLKLRLAAQQLRNVDVGKPRLGR 179 VVG ERR H L +VG GR E G HV L++R A + DV RLG+ Sbjct: 436 VVGDERRIFHVLLHMVG-NLIGRTEPG-HVTLRVRAA-----DDDVLDDRLGQ 481
>AK111520:Os02g0820900 | Length = 770 Score = 27.7 bits (60), Expect = 9.2 Identities = 24/53 (45%), Positives = 29/53 (54%) Frame = -2 Query: 337 VVGPERRPHHELQELVGERRDGRPELGRHVGLKLRLAAQQLRNVDVGKPRLGR 179 VVG ERR H L +VG GR E G HV L++R A + DV RLG+ Sbjct: 493 VVGDERRIFHVLLHMVG-NLIGRTEPG-HVTLRVRAA-----DDDVLDDRLGQ 538
>AK110543:Os03g0412400 | Length = 286 Score = 27.7 bits (60), Expect = 9.2 Identities = 12/41 (29%), Positives = 20/41 (48%) Frame = +2 Query: 5 DPLPCLTIPPPRFRRAPRGQNRQPATGQIMEESGASAAAVV 127 +P T+ PP P G+ +Q G + ++ SA A+V Sbjct: 165 EPAMATTMAPPPIALPPAGEEKQSYDGLVDDDDHVSAGAIV 205
>AF420318:Os02g0820900 | Length = 836 Score = 27.7 bits (60), Expect = 9.2 Identities = 24/53 (45%), Positives = 29/53 (54%) Frame = -2 Query: 337 VVGPERRPHHELQELVGERRDGRPELGRHVGLKLRLAAQQLRNVDVGKPRLGR 179 VVG ERR H L +VG GR E G HV L++R A + DV RLG+ Sbjct: 559 VVGDERRIFHVLLHMVG-NLIGRTEPG-HVTLRVRAA-----DDDVLDDRLGQ 604
>AF402798:Os07g0168300 | Length = 227 Score = 27.7 bits (60), Expect = 9.2 Identities = 18/50 (36%), Positives = 21/50 (42%) Frame = -2 Query: 349 HDVRVVGPERRPHHELQELVGERRDGRPELGRHVGLKLRLAAQQLRNVDV 200 H R G RR H + G RR R GRH + R A LR +V Sbjct: 124 HGGRRGGARRRAHPAAGGVGGARRGARRRQGRHPRRRTRRRALALREEEV 173 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 23,087,009 Number of extensions: 553912 Number of successful extensions: 2171 Number of sequences better than 10.0: 36 Number of HSP's gapped: 2168 Number of HSP's successfully gapped: 36 Length of query: 257 Length of database: 15,399,855 Length adjustment: 98 Effective length of query: 159 Effective length of database: 11,475,837 Effective search space: 1824658083 Effective search space used: 1824658083 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
