| Clone Name | FLbaf161k12 |
|---|---|
| Clone Library Name | barley_pub |
>P09854:DPOL_HHV1S DNA polymerase - Human herpesvirus 1 (strain SC16) (HHV-1) (Human| herpes simplex virus 1) Length = 1235 Score = 33.1 bits (74), Expect = 1.2 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +2 Query: 68 QPAATEPFPSPAKRKTDTDSEISPVDPPAKAARP 169 +PA PSPAKR +T SP DPP A++P Sbjct: 1104 EPAPPAALPSPAKRPRETP---SPADPPGGASKP 1134
>P04293:DPOL_HHV11 DNA polymerase - Human herpesvirus 1 (strain 17) (HHV-1) (Human| herpes simplex virus 1) Length = 1235 Score = 33.1 bits (74), Expect = 1.2 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +2 Query: 68 QPAATEPFPSPAKRKTDTDSEISPVDPPAKAARP 169 +PA PSPAKR +T SP DPP A++P Sbjct: 1104 EPAPPAALPSPAKRPRETP---SPADPPGGASKP 1134
>Q8CDC7:ZBTB9_MOUSE Zinc finger and BTB domain-containing protein 9 - Mus musculus| (Mouse) Length = 459 Score = 31.6 bits (70), Expect = 3.5 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +2 Query: 59 GQSQPAATEPFPSPAKRKTDTDSEISPVDPPA 154 G SQ + P P+PA ++ E S VDPPA Sbjct: 235 GVSQACGSHPLPTPALPSKPSEDESSTVDPPA 266
>Q99PU7:BAP1_MOUSE Ubiquitin carboxyl-terminal hydrolase BAP1 - Mus musculus (Mouse)| Length = 728 Score = 31.2 bits (69), Expect = 4.6 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 5/38 (13%) Frame = +2 Query: 71 PAATEPFPSPAKRKTDTDSEI-----SPVDPPAKAARP 169 P ++P P+P+ TDT SEI SP+ P ++A P Sbjct: 478 PTHSQPSPTPSNESTDTASEIGSAFNSPLRSPIRSANP 515
>Q92560:BAP1_HUMAN Ubiquitin carboxyl-terminal hydrolase BAP1 - Homo sapiens (Human)| Length = 729 Score = 31.2 bits (69), Expect = 4.6 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 5/38 (13%) Frame = +2 Query: 71 PAATEPFPSPAKRKTDTDSEI-----SPVDPPAKAARP 169 P ++P P+P+ TDT SEI SP+ P ++A P Sbjct: 479 PTHSQPSPTPSNESTDTASEIGSAFNSPLRSPIRSANP 516
>P07918:DPOL_HHV21 DNA polymerase - Human herpesvirus 2 (strain 186) (HHV-2) (Human| herpes simplex virus 2) Length = 1240 Score = 30.4 bits (67), Expect = 7.8 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +2 Query: 68 QPAATEPFPSPAKRKTDTDSEISPVDPPAKAARP 169 +PA PSPAKR +T S DPP A++P Sbjct: 1109 EPAPPAALPSPAKRPRETPSH---ADPPGGASKP 1139
>P04292:DPOL_HHV1K DNA polymerase - Human herpesvirus 1 (strain KOS) (HHV-1) (Human| herpes simplex virus 1) Length = 1235 Score = 30.4 bits (67), Expect = 7.8 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +2 Query: 68 QPAATEPFPSPAKRKTDTDSEISPVDPPAKAARP 169 +PA PSPAKR +T S DPP A++P Sbjct: 1104 EPAPPAALPSPAKRPRETPSH---ADPPGGASKP 1134 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 79,304,951 Number of extensions: 1201056 Number of successful extensions: 4169 Number of sequences better than 10.0: 7 Number of HSP's gapped: 4163 Number of HSP's successfully gapped: 7 Length of query: 254 Length of database: 100,686,439 Length adjustment: 111 Effective length of query: 143 Effective length of database: 70,239,694 Effective search space: 10044276242 Effective search space used: 10044276242 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)