ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf155a18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os08g0171700:Os08g0171700 50 9e-07
2AK073223:Os05g0117500 27 7.9

>Os08g0171700:Os08g0171700 |
          Length = 65
 Score = 50.4 bits (119), Expect = 9e-07
 Identities = 28/51 (54%), Positives = 34/51 (66%), Gaps = 3/51 (5%)
 Frame = +3

Query: 111 MANFAAQLKERFLGLVDRVTGCGRGAAAKEEAANTK---PAMKEHVEIRSR 254
           MA  AAQLK++F GL+ R+T CGR AA K+ AA  K    A  +H EIRSR
Sbjct: 1   MAKLAAQLKDKFCGLIGRITSCGR-AAHKDAAAGVKETHSASSQHTEIRSR 50



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>AK073223:Os05g0117500 |
          Length = 299

 Score = 27.3 bits (59), Expect = 7.9
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 135 KERFLGLVDRVTGCGRGAAAKEEAANT 215
           +E  LG+ DR+ GC RG  A  E   T
Sbjct: 268 EEELLGMTDRMPGCHRGGFALYEMMKT 294


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 13,999,744
Number of extensions: 259857
Number of successful extensions: 666
Number of sequences better than 10.0: 2
Number of HSP's gapped: 666
Number of HSP's successfully gapped: 2
Length of query: 200
Length of database: 15,399,855
Length adjustment: 96
Effective length of query: 104
Effective length of database: 11,555,919
Effective search space: 1201815576
Effective search space used: 1201815576
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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