ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf155a18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK241007.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 92 3e-15
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 92 3e-15
3emb|AL606649.4|OSJN00094 Oryza sativa genomic DNA, chromosome 4,... 92 3e-15
4dbj|AK121265.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 3e-15
5gb|AY107986.1| Zea mays PCO107237 mRNA sequence 80 1e-11
6emb|CT829088.1| Oryza sativa (indica cultivar-group) cDNA clone:... 74 6e-10
7ref|NM_001060566.1| Oryza sativa (japonica cultivar-group) Os04g... 74 6e-10
8dbj|AK063036.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 6e-10
9gb|AY106843.1| Zea mays PCO102445 mRNA sequence 66 2e-07
10gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 44 0.57
11emb|AL606590.3|OSJN00031 Oryza sativa genomic DNA, chromosome 4,... 44 0.57
12gb|AC188105.1| Pongo pygmaeus abelii chromosome UNK clone CH276-... 42 2.2
13gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 42 2.2
14gb|AC146447.3| Pan troglodytes BAC clone RP43-4N6 from 7, comple... 42 2.2
15gb|AC131110.3| Mus musculus BAC clone RP23-387J23 from chromosom... 42 2.2
16gb|AC006358.6| Homo sapiens PAC clone RP5-1127D14 from 7, comple... 42 2.2
17gb|AC153634.3| Mus musculus 6 BAC RP23-368O2 (Roswell Park Cance... 42 2.2
18gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 42 2.2
19emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete ... 42 2.2
20emb|BX640432.1| Bordetella parapertussis strain 12822, complete ... 42 2.2
21ref|NM_210301.1| Eremothecium gossypii AER087Cp (AER087C), mRNA 42 2.2
22dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complet... 42 2.2
23gb|AC134912.5| Mus musculus BAC clone RP23-162E15 from chromosom... 40 8.8
24dbj|AK243687.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 40 8.8
25ref|NM_001073408.1| Oryza sativa (japonica cultivar-group) Os12g... 40 8.8
26ref|XM_509493.2| PREDICTED: Pan troglodytes similar to KIAA1545 ... 40 8.8
27ref|XM_936428.2| PREDICTED: Homo sapiens KIAA1545 protein (KIAA1... 40 8.8
28ref|XM_495939.3| PREDICTED: Homo sapiens KIAA1545 protein (KIAA1... 40 8.8
29gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 8.8
30gb|AC159286.3| Mus musculus BAC clone RP23-314E22 from chromosom... 40 8.8
31gb|AC113041.9| Mus musculus chromosome 8, clone RP23-240K12, com... 40 8.8
32gb|AC146600.4| Mus musculus BAC clone RP23-386G7 from chromosome... 40 8.8
33gb|AY430049.1| Saccharopolyspora erythraea putative acyl carrier... 40 8.8
34gb|AC122377.4| Mus musculus BAC clone RP23-473B13 from chromosom... 40 8.8
35gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequ... 40 8.8
36gb|AC163161.4| Mus musculus BAC clone RP23-103A23 from chromosom... 40 8.8
37gb|AC159300.3| Mus musculus BAC clone RP23-242D23 from chromosom... 40 8.8
38emb|CT025632.2| Pan troglodytes chromosome X clone PTB-029A18 ma... 40 8.8
39gb|DQ267106.1| Triticum urartu clone BAC 210J24 chromosome 4A, c... 40 8.8
40dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
41emb|AL353148.8| Human DNA sequence from clone RP11-298H24 on chr... 40 8.8
42emb|AL109976.23|HSDJ794I6 Human DNA sequence from clone RP4-794I... 40 8.8
43gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 255... 40 8.8
44emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete ... 40 8.8
45emb|AL669842.11| Mouse DNA sequence from clone RP23-25D18 on chr... 40 8.8
46gb|AF490258.1| Homo sapiens XTP9 (XTP9) mRNA, complete cds 40 8.8
47gb|AC131212.6| Homo sapiens 12 BAC RP13-554M15 (Rowsell Park Can... 40 8.8
48gb|AC128689.3| Homo sapiens 3 BAC RP11-657O9 (Roswell Park Cance... 40 8.8
49dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 8.8
50dbj|AB180960.2| Streptomyces kasugaensis gene for two-component ... 40 8.8
51gb|AC087061.22| Mus musculus strain C57BL/6J chromosome 1 clone ... 40 8.8
52gb|AF274573.4| Homo sapiens chromosome X clone RP11-316K19, RP11... 40 8.8
53emb|AL954684.9| Mouse DNA sequence from clone RP24-352O9 on chro... 40 8.8
54gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 8.8
55gb|AC074311.28| Mus musculus strain C57BL/6J chromosome 1 clone ... 40 8.8
56emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118... 40 8.8
57emb|AJ576060.1|TDE576060 Triatoma delpontei ITS1, 5.8S rRNA gene... 40 8.8
58emb|AJ576059.1|TDE576059 Triatoma delpontei ITS1, 5.8S rRNA gene... 40 8.8
59emb|AJ576058.1|TDE576058 Triatoma delpontei ITS1, 5.8S rRNA gene... 40 8.8
60emb|AJ576057.1|TDE576057 Triatoma delpontei ITS1, 5.8S rRNA gene... 40 8.8
61gb|AC136640.2| Mus musculus BAC clone RP23-2E24 from 12, complet... 40 8.8
62emb|AL671874.17| Mouse DNA sequence from clone RP23-169I24 on ch... 40 8.8
63emb|AL844530.7| Mouse DNA sequence from clone RP23-248L2 on chro... 40 8.8
64emb|AL645547.14| Mouse DNA sequence from clone RP23-158M12 on ch... 40 8.8
65emb|AL833797.6| Mouse DNA sequence from clone RP23-89B11 on chro... 40 8.8 
>dbj|AK241007.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065053G21, full
            insert sequence
          Length = 2389
 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 73/82 (89%)
 Strand = Plus / Minus

                                                                        
Query: 108  cccatggccaacttcgcagcccagctcaaggagaggttcctcggcctcgtcgaccgcgtc 167
            ||||||||||| ||||| || ||||||||||| ||||| |||||||||||||| ||||||
Sbjct: 1702 cccatggccaagttcgctgctcagctcaaggacaggtttctcggcctcgtcgagcgcgtc 1643

                                  
Query: 168  accggctgcggtcgcggtgccg 189
             |||||||||| ||||| ||||
Sbjct: 1642 gccggctgcggccgcggcgccg 1621
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 73/82 (89%)
 Strand = Plus / Plus

                                                                            
Query: 108      cccatggccaacttcgcagcccagctcaaggagaggttcctcggcctcgtcgaccgcgtc 167
                ||||||||||| ||||| || ||||||||||| ||||| |||||||||||||| ||||||
Sbjct: 32510518 cccatggccaagttcgctgctcagctcaaggacaggtttctcggcctcgtcgagcgcgtc 32510577

                                      
Query: 168      accggctgcggtcgcggtgccg 189
                 |||||||||| ||||| ||||
Sbjct: 32510578 gccggctgcggccgcggcgccg 32510599



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                            
Query: 108      cccatggccaacttcgcagcccagctcaaggagaggttcctcggcctcgtcgaccgcgtc 167
                |||||||||| || ||| || ||||||||||| | |||| ||||||||||||| ||||||
Sbjct: 32512738 cccatggccagctacgcggcgcagctcaaggacatgttcttcggcctcgtcgagcgcgtc 32512797

                                 
Query: 168      accggctgcggtcgcgg 184
                ||||||| ||| |||||
Sbjct: 32512798 accggctacggacgcgg 32512814



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 12      agaagcaacagctgcagcttgaactt 37
               |||||||||||| |||||||||||||
Sbjct: 7068465 agaagcaacagcagcagcttgaactt 7068490
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>emb|AL606649.4|OSJN00094 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0003B01,
             complete sequence
          Length = 153643

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 73/82 (89%)
 Strand = Plus / Plus

                                                                         
Query: 108   cccatggccaacttcgcagcccagctcaaggagaggttcctcggcctcgtcgaccgcgtc 167
             ||||||||||| ||||| || ||||||||||| ||||| |||||||||||||| ||||||
Sbjct: 29252 cccatggccaagttcgctgctcagctcaaggacaggtttctcggcctcgtcgagcgcgtc 29311

                                   
Query: 168   accggctgcggtcgcggtgccg 189
              |||||||||| ||||| ||||
Sbjct: 29312 gccggctgcggccgcggcgccg 29333



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                         
Query: 108   cccatggccaacttcgcagcccagctcaaggagaggttcctcggcctcgtcgaccgcgtc 167
             |||||||||| || ||| || ||||||||||| | |||| ||||||||||||| ||||||
Sbjct: 31472 cccatggccagctacgcggcgcagctcaaggacatgttcttcggcctcgtcgagcgcgtc 31531

                              
Query: 168   accggctgcggtcgcgg 184
             ||||||| ||| |||||
Sbjct: 31532 accggctacggacgcgg 31548
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>dbj|AK121265.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D11, full
           insert sequence
          Length = 596

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 73/82 (89%)
 Strand = Plus / Plus

                                                                       
Query: 108 cccatggccaacttcgcagcccagctcaaggagaggttcctcggcctcgtcgaccgcgtc 167
           ||||||||||| ||||| || ||||||||||| ||||| |||||||||||||| ||||||
Sbjct: 117 cccatggccaagttcgctgctcagctcaaggacaggtttctcggcctcgtcgagcgcgtc 176

                                 
Query: 168 accggctgcggtcgcggtgccg 189
            |||||||||| ||||| ||||
Sbjct: 177 gccggctgcggccgcggcgccg 198
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>gb|AY107986.1| Zea mays PCO107237 mRNA sequence
          Length = 493

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 46/48 (95%)
 Strand = Plus / Plus

                                                           
Query: 129 cagctcaaggagaggttcctcggcctcgtcgaccgcgtcaccggctgc 176
           ||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 128 cagctcaaggacatgttcctcggcctcgtcgaccgcgtcaccggctgc 175
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>emb|CT829088.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA009G23, full
           insert sequence
          Length = 614

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                       
Query: 108 cccatggccaacttcgcagcccagctcaaggagaggttcctcggcctcgtcgaccgcgtc 167
           |||||||||| || ||| || ||||||||||| | |||| ||||||||||||| ||||||
Sbjct: 143 cccatggccagctacgcggcgcagctcaaggacatgttcttcggcctcgtcgagcgcgtc 202

                            
Query: 168 accggctgcggtcgcgg 184
           ||||||| ||| |||||
Sbjct: 203 accggctacggacgcgg 219
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>ref|NM_001060566.1| Oryza sativa (japonica cultivar-group) Os04g0639100 (Os04g0639100)
           mRNA, complete cds
          Length = 832

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                       
Query: 108 cccatggccaacttcgcagcccagctcaaggagaggttcctcggcctcgtcgaccgcgtc 167
           |||||||||| || ||| || ||||||||||| | |||| ||||||||||||| ||||||
Sbjct: 147 cccatggccagctacgcggcgcagctcaaggacatgttcttcggcctcgtcgagcgcgtc 206

                            
Query: 168 accggctgcggtcgcgg 184
           ||||||| ||| |||||
Sbjct: 207 accggctacggacgcgg 223
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>dbj|AK063036.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-C11, full
           insert sequence
          Length = 832

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                       
Query: 108 cccatggccaacttcgcagcccagctcaaggagaggttcctcggcctcgtcgaccgcgtc 167
           |||||||||| || ||| || ||||||||||| | |||| ||||||||||||| ||||||
Sbjct: 147 cccatggccagctacgcggcgcagctcaaggacatgttcttcggcctcgtcgagcgcgtc 206

                            
Query: 168 accggctgcggtcgcgg 184
           ||||||| ||| |||||
Sbjct: 207 accggctacggacgcgg 223
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>gb|AY106843.1| Zea mays PCO102445 mRNA sequence
          Length = 808

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 63/73 (86%)
 Strand = Plus / Plus

                                                                       
Query: 111 atggccaacttcgcagcccagctcaaggagaggttcctcggcctcgtcgaccgcgtcacc 170
           |||||||||||||| || ||| | ||||| | ||||||||||||||||||||| ||| ||
Sbjct: 354 atggccaacttcgctgctcagattaaggacaagttcctcggcctcgtcgaccgtgtcgcc 413

                        
Query: 171 ggctgcggtcgcg 183
           ||| |||| ||||
Sbjct: 414 ggccgcggccgcg 426
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>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 524  aataaatggtatttttgtggag 545
            ||||||||||||||||||||||
Sbjct: 4698 aataaatggtatttttgtggag 4677
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>emb|AL606590.3|OSJN00031 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0052O21,
             complete sequence
          Length = 166475

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 12    agaagcaacagctgcagcttgaactt 37
             |||||||||||| |||||||||||||
Sbjct: 89656 agaagcaacagcagcagcttgaactt 89681
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>gb|AC188105.1| Pongo pygmaeus abelii chromosome UNK clone CH276-53H12, complete
             sequence
          Length = 191332

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 74    tcaggaagaattccacacagc 94
             |||||||||||||||||||||
Sbjct: 15800 tcaggaagaattccacacagc 15820
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 147     ctcggcctcgtcgaccgcgtc 167
               |||||||||||||||||||||
Sbjct: 3379444 ctcggcctcgtcgaccgcgtc 3379424
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>gb|AC146447.3| Pan troglodytes BAC clone RP43-4N6 from 7, complete sequence
          Length = 200529

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 21     agctgcagcttgaacttcagg 41
              |||||||||||||||||||||
Sbjct: 126393 agctgcagcttgaacttcagg 126373
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>gb|AC131110.3| Mus musculus BAC clone RP23-387J23 from chromosome 6, complete sequence
          Length = 205463

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 407    taagggtgccgctttgttgtgcaat 431
              |||||||||||||||||||| ||||
Sbjct: 104338 taagggtgccgctttgttgtacaat 104362
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>gb|AC006358.6| Homo sapiens PAC clone RP5-1127D14 from 7, complete sequence
          Length = 143216

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 21    agctgcagcttgaacttcagg 41
             |||||||||||||||||||||
Sbjct: 80232 agctgcagcttgaacttcagg 80252
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>gb|AC153634.3| Mus musculus 6 BAC RP23-368O2 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 190237

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 407    taagggtgccgctttgttgtgcaat 431
              |||||||||||||||||||| ||||
Sbjct: 179190 taagggtgccgctttgttgtacaat 179166
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>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V,
              complete sequence
          Length = 1519138

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 221    ggccatgaaggagcatgtgga 241
              |||||||||||||||||||||
Sbjct: 803756 ggccatgaaggagcatgtgga 803736
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>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16
          Length = 348706

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 143    gttcctcggcctcgtcgaccg 163
              |||||||||||||||||||||
Sbjct: 345787 gttcctcggcctcgtcgaccg 345767
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>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14
          Length = 346301

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 143   gttcctcggcctcgtcgaccg 163
             |||||||||||||||||||||
Sbjct: 70571 gttcctcggcctcgtcgaccg 70551
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>ref|NM_210301.1| Eremothecium gossypii AER087Cp (AER087C), mRNA
          Length = 1353

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 221 ggccatgaaggagcatgtgga 241
           |||||||||||||||||||||
Sbjct: 177 ggccatgaaggagcatgtgga 197
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>dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complete sequence
          Length = 210614

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 153   ctcgtcgaccgcgtcaccggc 173
             |||||||||||||||||||||
Sbjct: 25155 ctcgtcgaccgcgtcaccggc 25135
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>gb|AC134912.5| Mus musculus BAC clone RP23-162E15 from chromosome 14, complete sequence
          Length = 204954

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 128    ccagctcaaggagaggttcc 147
              ||||||||||||||||||||
Sbjct: 202348 ccagctcaaggagaggttcc 202367
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>dbj|AK243687.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100090N22,
           full insert sequence
          Length = 1909

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 151 gcctcgtcgaccgcgtcaccggct 174
           |||||||||||||| |||||||||
Sbjct: 833 gcctcgtcgaccgcctcaccggct 856
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>ref|NM_001073408.1| Oryza sativa (japonica cultivar-group) Os12g0512800 (Os12g0512800)
           mRNA, complete cds
          Length = 1569

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 151 gcctcgtcgaccgcgtcaccggct 174
           |||||||||||||| |||||||||
Sbjct: 725 gcctcgtcgaccgcctcaccggct 748
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>ref|XM_509493.2| PREDICTED: Pan troglodytes similar to KIAA1545 protein (LOC452383),
            mRNA
          Length = 4547

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 192  gccaaggaggaggccgccaa 211
            ||||||||||||||||||||
Sbjct: 2494 gccaaggaggaggccgccaa 2513
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>ref|XM_936428.2| PREDICTED: Homo sapiens KIAA1545 protein (KIAA1545), mRNA
          Length = 4325

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 192  gccaaggaggaggccgccaa 211
            ||||||||||||||||||||
Sbjct: 2275 gccaaggaggaggccgccaa 2294
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>ref|XM_495939.3| PREDICTED: Homo sapiens KIAA1545 protein (KIAA1545), mRNA
          Length = 4471

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 192  gccaaggaggaggccgccaa 211
            ||||||||||||||||||||
Sbjct: 2416 gccaaggaggaggccgccaa 2435
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 186     gccgccgccaaggaggaggccgcc 209
               |||||||||||||| |||||||||
Sbjct: 3700217 gccgccgccaaggaagaggccgcc 3700240
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>gb|AC159286.3| Mus musculus BAC clone RP23-314E22 from chromosome 14, complete
             sequence
          Length = 210984

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   ccagctcaaggagaggttcc 147
             ||||||||||||||||||||
Sbjct: 26888 ccagctcaaggagaggttcc 26907
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>gb|AC113041.9| Mus musculus chromosome 8, clone RP23-240K12, complete sequence
          Length = 175827

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   ccagctcaaggagaggttcc 147
             ||||||||||||||||||||
Sbjct: 82361 ccagctcaaggagaggttcc 82342
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>gb|AC146600.4| Mus musculus BAC clone RP23-386G7 from chromosome 17, complete sequence
          Length = 198403

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 128    ccagctcaaggagaggttcc 147
              ||||||||||||||||||||
Sbjct: 112801 ccagctcaaggagaggttcc 112820
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>gb|AY430049.1| Saccharopolyspora erythraea putative acyl carrier protein synthase
           (acps) gene, complete cds
          Length = 369

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 188 cgccgccaaggaggaggccgccaa 211
           |||||||||||||| |||||||||
Sbjct: 156 cgccgccaaggaggcggccgccaa 179
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>gb|AC122377.4| Mus musculus BAC clone RP23-473B13 from chromosome 17, complete sequence
          Length = 174143

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 128    ccagctcaaggagaggttcc 147
              ||||||||||||||||||||
Sbjct: 128527 ccagctcaaggagaggttcc 128508
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>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence
          Length = 642517

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 175    gcggtcgcggtgccgccgcc 194
              ||||||||||||||||||||
Sbjct: 190070 gcggtcgcggtgccgccgcc 190089
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>gb|AC163161.4| Mus musculus BAC clone RP23-103A23 from chromosome 6, complete sequence
          Length = 224416

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 128    ccagctcaaggagaggttcc 147
              ||||||||||||||||||||
Sbjct: 127570 ccagctcaaggagaggttcc 127551
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>gb|AC159300.3| Mus musculus BAC clone RP23-242D23 from chromosome 6, complete sequence
          Length = 200738

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 128    ccagctcaaggagaggttcc 147
              ||||||||||||||||||||
Sbjct: 190185 ccagctcaaggagaggttcc 190204
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>emb|CT025632.2| Pan troglodytes chromosome X clone PTB-029A18 map Xq28, complete
             sequence
          Length = 144091

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 431   tctccctctgttaatttcta 450
             ||||||||||||||||||||
Sbjct: 96249 tctccctctgttaatttcta 96268
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>gb|DQ267106.1| Triticum urartu clone BAC 210J24 chromosome 4A, complete sequence
          Length = 111912

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 185   tgccgccgccaaggaggaggccgc 208
             ||||| ||||||||||||||||||
Sbjct: 72191 tgccgacgccaaggaggaggccgc 72168
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 151      gcctcgtcgaccgcgtcaccggct 174
                |||||||||||||| |||||||||
Sbjct: 19891178 gcctcgtcgaccgcctcaccggct 19891155
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>emb|AL353148.8| Human DNA sequence from clone RP11-298H24 on chromosome 10 Contains a
             novel gene, complete sequence
          Length = 181308

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 344   tgtgtgtctggttctttcag 363
             ||||||||||||||||||||
Sbjct: 39398 tgtgtgtctggttctttcag 39379
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>emb|AL109976.23|HSDJ794I6 Human DNA sequence from clone RP4-794I6 on chromosome 20 Contains the
             3'end of the ITPA gene for inosine triphosphatase
             (nucleoside triphosphate pyrophosphatase), the 3' end of
             the C20orf194 gene for chromosome 20 open reading frame
             194, the SLC4A11 gene for solute carrier family 4, sodium
             bicarbonate transporter-like 1, member 11 (bicarbonate
             transporter related protein 1, BTR1) and two CpG islands,
             complete sequence
          Length = 119071

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   agcccagctcaaggagaggt 144
             ||||||||||||||||||||
Sbjct: 67731 agcccagctcaaggagaggt 67750
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>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome
          Length = 2174500

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 527     aaatggtatttttgtggaga 546
               ||||||||||||||||||||
Sbjct: 1686379 aaatggtatttttgtggaga 1686360
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>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29
          Length = 300100

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 186    gccgccgccaaggaggaggccgcc 209
              ||||||||| ||||||||||||||
Sbjct: 186733 gccgccgcccaggaggaggccgcc 186710
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>emb|AL669842.11| Mouse DNA sequence from clone RP23-25D18 on chromosome 11 Contains
             three novel genes, the 3' end of the Ntn1 gene for netrin
             1 and the 3' end of the Stx8 gene for syntaxin 8, complete
             sequence
          Length = 121134

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    aacttcaggcttcagagcat 52
             ||||||||||||||||||||
Sbjct: 89778 aacttcaggcttcagagcat 89797
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>gb|AF490258.1| Homo sapiens XTP9 (XTP9) mRNA, complete cds
          Length = 2004

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 192  gccaaggaggaggccgccaa 211
            ||||||||||||||||||||
Sbjct: 1360 gccaaggaggaggccgccaa 1379
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>gb|AC131212.6| Homo sapiens 12 BAC RP13-554M15 (Rowsell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 160039

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   gccaaggaggaggccgccaa 211
             ||||||||||||||||||||
Sbjct: 67135 gccaaggaggaggccgccaa 67154
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>gb|AC128689.3| Homo sapiens 3 BAC RP11-657O9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 126318

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 260   caacgtgtcaggtggatcag 279
             ||||||||||||||||||||
Sbjct: 49720 caacgtgtcaggtggatcag 49701
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 122    cgcagcccagctcaaggaga 141
              ||||||||||||||||||||
Sbjct: 123476 cgcagcccagctcaaggaga 123457



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 146    cctcggcctcgtcgaccgcg 165
              ||||||||||||||||||||
Sbjct: 648488 cctcggcctcgtcgaccgcg 648469
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>dbj|AB180960.2| Streptomyces kasugaensis gene for two-component system sensor kinase,
            aminoglycoside 2'-N-acetyltransferase, ABC transporter
            ATP-binding protein, partial and complete cds
          Length = 1669

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 145  tcctcggcctcgtcgaccgcgtca 168
            |||||||||||| |||||||||||
Sbjct: 1570 tcctcggcctcgccgaccgcgtca 1547
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>gb|AC087061.22| Mus musculus strain C57BL/6J chromosome 1 clone rp23-140e19, complete
             sequence
          Length = 202764

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 75    caggaagaattccacacagc 94
             ||||||||||||||||||||
Sbjct: 60562 caggaagaattccacacagc 60581
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>gb|AF274573.4| Homo sapiens chromosome X clone RP11-316K19, RP11-316M19, RP4-687A5 map
              q28, complete sequence
          Length = 189436

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 431    tctccctctgttaatttcta 450
              ||||||||||||||||||||
Sbjct: 117179 tctccctctgttaatttcta 117198
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>emb|AL954684.9| Mouse DNA sequence from clone RP24-352O9 on chromosome 2, complete
             sequence
          Length = 170478

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   ccagctcaaggagaggttcc 147
             ||||||||||||||||||||
Sbjct: 87595 ccagctcaaggagaggttcc 87614
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 186     gccgccgccaaggaggaggc 205
               ||||||||||||||||||||
Sbjct: 3267349 gccgccgccaaggaggaggc 3267330
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>gb|AC074311.28| Mus musculus strain C57BL/6J chromosome 1 clone rp23-157j4, complete
             sequence
          Length = 185871

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    caggaagaattccacacagc 94
             ||||||||||||||||||||
Sbjct: 33646 caggaagaattccacacagc 33627
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>emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118_C12 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 165433

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 151    gcctcgtcgaccgcgtcaccggct 174
              |||||||||||||| |||||||||
Sbjct: 136082 gcctcgtcgaccgcctcaccggct 136105
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>emb|AJ576060.1|TDE576060 Triatoma delpontei ITS1, 5.8S rRNA gene and ITS2, haplotype GT3B
          Length = 1273

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 325 gtatttgtctttgcggattt 344
           ||||||||||||||||||||
Sbjct: 194 gtatttgtctttgcggattt 175
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>emb|AJ576059.1|TDE576059 Triatoma delpontei ITS1, 5.8S rRNA gene and ITS2, haplotype GT3A
          Length = 1273

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 325 gtatttgtctttgcggattt 344
           ||||||||||||||||||||
Sbjct: 194 gtatttgtctttgcggattt 175
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>emb|AJ576058.1|TDE576058 Triatoma delpontei ITS1, 5.8S rRNA gene and ITS2, haplotype GT2A
          Length = 1275

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 325 gtatttgtctttgcggattt 344
           ||||||||||||||||||||
Sbjct: 194 gtatttgtctttgcggattt 175
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>emb|AJ576057.1|TDE576057 Triatoma delpontei ITS1, 5.8S rRNA gene and ITS2, haplotype GT1A
          Length = 1273

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 325 gtatttgtctttgcggattt 344
           ||||||||||||||||||||
Sbjct: 194 gtatttgtctttgcggattt 175
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>gb|AC136640.2| Mus musculus BAC clone RP23-2E24 from 12, complete sequence
          Length = 199358

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 128    ccagctcaaggagaggttcc 147
              ||||||||||||||||||||
Sbjct: 104703 ccagctcaaggagaggttcc 104722
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>emb|AL671874.17| Mouse DNA sequence from clone RP23-169I24 on chromosome X, complete
              sequence
          Length = 187669

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 128    ccagctcaaggagaggttcc 147
              ||||||||||||||||||||
Sbjct: 104982 ccagctcaaggagaggttcc 105001
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>emb|AL844530.7| Mouse DNA sequence from clone RP23-248L2 on chromosome 2, complete
              sequence
          Length = 169779

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 128    ccagctcaaggagaggttcc 147
              ||||||||||||||||||||
Sbjct: 155805 ccagctcaaggagaggttcc 155786
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>emb|AL645547.14| Mouse DNA sequence from clone RP23-158M12 on chromosome X, complete
             sequence
          Length = 173477

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    ggaagaattccacacagctc 96
             ||||||||||||||||||||
Sbjct: 39692 ggaagaattccacacagctc 39673
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>emb|AL833797.6| Mouse DNA sequence from clone RP23-89B11 on chromosome 2, complete
             sequence
          Length = 165400

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   ccagctcaaggagaggttcc 147
             ||||||||||||||||||||
Sbjct: 11396 ccagctcaaggagaggttcc 11377


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 100,154,081
Number of extensions: 5552114
Number of successful extensions: 109915
Number of sequences better than 10.0: 65
Number of HSP's gapped: 109915
Number of HSP's successfully gapped: 69
Length of query: 601
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 579
Effective length of database: 18,508,616,841
Effective search space: 10716489150939
Effective search space used: 10716489150939
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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