ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf155a04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q8XHH1:LGT2_CLOPE Prolipoprotein diacylglyceryl transferase 2 - ... 30 3.6
2Q9V5N8:STAN_DROME Protocadherin-like wing polarity protein stan ... 30 6.1

>Q8XHH1:LGT2_CLOPE Prolipoprotein diacylglyceryl transferase 2 - Clostridium|
           perfringens
          Length = 256
 Score = 30.4 bits (67), Expect = 3.6
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = -1

Query: 289 CLVAGSLAGISCTTSIGLITPCPSSCPA 206
           CL+AG   G   T+SIG+I P  S  PA
Sbjct: 133 CLLAGCCYGAETTSSIGIIFPADSLAPA 160



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>Q9V5N8:STAN_DROME Protocadherin-like wing polarity protein stan precursor - Drosophila|
            melanogaster (Fruit fly)
          Length = 3574

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 295  YSCLVAGSLAGISCTTSIGLITPCPS 218
            Y+C+   +  G +C T +G + PCPS
Sbjct: 1504 YTCVCPSTHTGQNCETGVGHLRPCPS 1529


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 65,172,475
Number of extensions: 1166724
Number of successful extensions: 2765
Number of sequences better than 10.0: 2
Number of HSP's gapped: 2760
Number of HSP's successfully gapped: 2
Length of query: 169
Length of database: 100,686,439
Length adjustment: 105
Effective length of query: 64
Effective length of database: 71,885,464
Effective search space: 4600669696
Effective search space used: 4600669696
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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