ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf161h21 |
|---|---|
| Clone Library Name | barley_pub |
>Q689G4:PRR73_ORYSA Two-component response regulator-like PRR73 - Oryza sativa (Rice)| Length = 767 Score = 866 bits (2238), Expect = 0.0 Identities = 479/776 (61%), Positives = 545/776 (70%), Gaps = 17/776 (2%) Frame = +2 Query: 302 MVSAGQAGADGPSSSDIRGIGNGAVENQNGHALKPNEDKEWRGGSKEEDWPSTHSAPPG- 478 M SA +AG D PS D++G GNG +EN GH+ KP E++EWR G E D P+ HS PP Sbjct: 1 MGSACEAGTDEPSRDDVKGTGNGILEN--GHSHKP-EEEEWRNGMGE-DLPNGHSTPPEP 56 Query: 479 --LDEHKQQQQDRVIRWEKFLPVKTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLD 652 DE K+ Q +++RWE+FLPVKTLRVLLVENDD TR VV ALLRKC YEVI AENGL Sbjct: 57 QQTDEQKEHQV-QIVRWERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLH 115 Query: 653 AWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCL 832 AWQ LED+QN IDLVLTEV MP LSGIGLLSKITSH ICK IPVIMMS NDSM TVFKCL Sbjct: 116 AWQCLEDLQNHIDLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCL 175 Query: 833 SKGAVDFLVKPIRKNELKTLWQHIWRRCXXXXXXXXXXXX--QKCSKPKTGDEYAKNSGG 1006 SKGAVDFLVKPIRKNELK LWQH+WRRC QKC+KPK DEY NSG Sbjct: 176 SKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGIRTQKCTKPKVDDEYENNSGS 235 Query: 1007 SHXXXXXXXXXXX---FSVGPNARDGSDNGSGTQSSWTKRAVEIDSPQLVSSDHLSDSPD 1177 ++ SVG NARDGSDNGSGTQSSWTKRAVEIDSPQ +S D SD PD Sbjct: 236 NNDNEDDDDNDEDDDDLSVGHNARDGSDNGSGTQSSWTKRAVEIDSPQQMSPDQPSDLPD 295 Query: 1178 STCAQVIHPRSEIGSNRWLPTANKRNINNQKEKNDDSMGKYLEIGAPRNSSLAYQSSPNE 1357 STCAQVIHP SEI SNRWLPTANKR+ KE NDDSMGKYLEIGAPRNSS+ YQSSP E Sbjct: 296 STCAQVIHPTSEICSNRWLPTANKRSGKKHKENNDDSMGKYLEIGAPRNSSMEYQSSPRE 355 Query: 1358 MSVNPTEKQHENLISKNKSV----DKIVIDKPTSETADLISSIARNTESKQAARITDAPD 1525 MSVNPTEKQHE L+ ++K+ + ++PT++T DLISSIAR+T+ KQ RI +APD Sbjct: 356 MSVNPTEKQHETLMPQSKTTRETDSRNTQNEPTTQTVDLISSIARSTDDKQVVRINNAPD 415 Query: 1526 CSSKMPHGNEMNNDSPINMPSKELGLKISETTRRGTEIHDERSILKRSNLSAFTRYHTPM 1705 CSSK+P GN+ N DS I+M S+ELGLK +TT TEIHDER+ILKRS+LSAFTRYHT + Sbjct: 416 CSSKVPDGNDKNRDSLIDMTSEELGLKRLKTTGSATEIHDERNILKRSDLSAFTRYHTTV 475 Query: 1706 ASDQGGATFRGSCSPQDNSSEAVKTNSTCKMESNSDAAQIKQXXXXXXXXXXXXXXTKNA 1885 AS+QGGA F GSCSPQDNSSEA+KT+S CK++SNSDAA+IKQ TKNA Sbjct: 476 ASNQGGAGFGGSCSPQDNSSEALKTDSNCKVKSNSDAAEIKQGSNGSSNNNDMGSSTKNA 535 Query: 1886 NTKPCTDRERVMPPSLVKSNQQTSAFHPVQHQVSPADAVGKDKAAEEIANAVKVDXXXXX 2065 TKP ++R +V+ PS VK+ Q TSAFHPVQ Q SPA+ VGKDK E IAN V V Sbjct: 536 ITKPSSNRGKVISPSAVKATQHTSAFHPVQRQTSPANVVGKDKVDEGIANGVNVGHPVDV 595 Query: 2066 XXXXXXXXXXXXYYRHVMV--QQQTLIDR-ASNARCGSSNASDSPMEGHAAXXXXXXXXX 2236 YY HVM QQQ I+R +S+A+CGSSN D P+EGHAA Sbjct: 596 QNSFMQHHHHVHYYVHVMTQQQQQPSIERGSSDAQCGSSNVFDPPIEGHAANYSVNGSFS 655 Query: 2237 XXXXXXXXXXXXXFAPNIARPNME--SGTMDKTEAXXXXXXXXXXXXXXTDLVCQNQLSQ 2410 APN+ RPNME +G +D+ A DL QN + Sbjct: 656 GGHNGNNGQRGPSTAPNVGRPNMETVNGIVDENGA---GGGNGSGSGSGNDLY-QNGVCY 711 Query: 2411 REAAVNKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQSGQEDEAGQAADR 2578 REAA+NKFRQKRK RNFGKKVRYQSRKRLAEQRPR+RGQFVRQSGQED+AGQ DR Sbjct: 712 REAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQSGQEDQAGQDEDR 767
>Q689G8:PRR37_ORYSA Two-component response regulator-like PRR37 - Oryza sativa (Rice)| Length = 742 Score = 651 bits (1679), Expect = 0.0 Identities = 367/697 (52%), Positives = 447/697 (64%), Gaps = 11/697 (1%) Frame = +2 Query: 500 QQDRVIRWEKFLPVKTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQ 679 Q+ + WE+F+ KT++VLLV++DD TR VV ALLR C YEVI AENG AW YLED+Q Sbjct: 46 QRPPQVCWERFIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQ 105 Query: 680 NRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLV 859 N IDLVLTEV MP +SGI LLS+I +H+ICK IPVIMMS ND+M TVFKCLSKGAVDFLV Sbjct: 106 NSIDLVLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLV 165 Query: 860 KPIRKNELKTLWQHIWRRC--XXXXXXXXXXXXQKCSKPKTGDEYAKNSGGSHXXXXXXX 1033 KPIRKNELK LWQH+WRRC QKC+K K+GDE N+G + Sbjct: 166 KPIRKNELKNLWQHVWRRCHSSSGSGSESGIQTQKCAKSKSGDESNNNNGSNDDDDDDGV 225 Query: 1034 XXXXFSVGPNARDGSDNGSGT--QSSWTKRAVEIDSPQLVSSDHLSDSPDSTCAQVIHPR 1207 +G NARDGSDNGSGT QSSWTKRAVEIDSPQ +S D L+D PDSTCAQVIH + Sbjct: 226 I-----MGLNARDGSDNGSGTQAQSSWTKRAVEIDSPQAMSPDQLADPPDSTCAQVIHLK 280 Query: 1208 SEIGSNRWLPTANKRNINNQKEKNDDSMGKYLEIGAPRNSSLAYQSSPNEMSVNPTEKQH 1387 S+I SNRWLP + +N QKE NDD GK LEIG+PRN + AYQSSPNE S+ PT++++ Sbjct: 281 SDICSNRWLPCTSNKNSKKQKETNDDFKGKDLEIGSPRNLNTAYQSSPNERSIKPTDRRN 340 Query: 1388 ENLISKN-KSVDKIVIDKPTSETADLISSIARNTESKQAARITDAPDCSSKMPHGNEMNN 1564 E + N K +++ + ADLI S+A+N +++QAAR +AP+CSSK+P G + N Sbjct: 341 EYPLQNNSKEAAMENLEESSVRAADLIGSMAKNMDAQQAARAANAPNCSSKVPEGKDKNR 400 Query: 1565 DSPINMPSKELGLKISETTRRGTEI--HDERSILKRSNLSAFTRYHTPMASDQGGATFRG 1738 D+ MPS EL LK S +T G ++R++L+RS+LSAFTRYHTP+AS+QGG F G Sbjct: 401 DN--IMPSLELSLKRSRSTGDGANAIQEEQRNVLRRSDLSAFTRYHTPVASNQGGTGFMG 458 Query: 1739 SCSPQDNSSEAVKTNSTCKMESNSDAAQIKQXXXXXXXXXXXXXXTKNANTKPCTDRERV 1918 SCS DNSSEA+KT+S M+SNSDAA IKQ TKN TKP T++ERV Sbjct: 459 SCSLHDNSSEAMKTDSAYNMKSNSDAAPIKQGSNGSSNNNDMGSTTKNVVTKPSTNKERV 518 Query: 1919 MPPSLVKSNQQTSAFHPVQHQVSPADAVGKDKAAEEIANAVKVDXXXXXXXXXXXXXXXX 2098 M PS VK+N TSAFHP QH SPA+ GK+K E NA K Sbjct: 519 MSPSAVKANGHTSAFHPAQHWTSPANTTGKEKTDEVANNAAKRAQPGEVQSNLVQHPRPI 578 Query: 2099 XYYRHVMVQQQTLIDRASNARCGSSNASDSPMEGHAAXXXXXXXXXXXXXXXXXXXXXXF 2278 +Y H V ++ + +CGSSN D P+EGHAA Sbjct: 579 LHYVHFDVSREN--GGSGAPQCGSSNVFDPPVEGHAANYGVNGSNSGSNNGSNGQNGSTT 636 Query: 2279 APNIARPNME--SGTMDKTEAXXXXXXXXXXXXXXTDLVCQ--NQLSQREAAVNKFRQKR 2446 A N RPNME +GT++K+ D+ + Q R AAV KFRQKR Sbjct: 637 AVNAERPNMEIANGTINKS---GPGGGNGSGSGSGNDMYLKRFTQREHRVAAVIKFRQKR 693 Query: 2447 KERNFGKKVRYQSRKRLAEQRPRVRGQFVRQSGQEDE 2557 KERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ+ Q+ + Sbjct: 694 KERNFGKKVRYQSRKRLAEQRPRVRGQFVRQAVQDQQ 730
>Q93WK5:APRR7_ARATH Two-component response regulator-like APRR7 - Arabidopsis thaliana| (Mouse-ear cress) Length = 727 Score = 311 bits (797), Expect = 9e-84 Identities = 199/467 (42%), Positives = 265/467 (56%), Gaps = 23/467 (4%) Frame = +2 Query: 476 GLDEHKQQQQDRVIRWEKFLPVKTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDA 655 GL QQ + WE+FL V+T+RVLLVENDDCTR++V ALLR C YEV+ A NG+ A Sbjct: 54 GLQIPLSQQTAATVCWERFLHVRTIRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQA 113 Query: 656 WQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLS 835 W+ LED+ N ID+VLTEV MP LSGIGLL KI +H + IPVIMMS +DSM VFKCLS Sbjct: 114 WKVLEDLNNHIDIVLTEVIMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLS 173 Query: 836 KGAVDFLVKPIRKNELKTLWQHIWRRC---XXXXXXXXXXXXQKCSKPKTGDEYAKNSGG 1006 KGAVDFLVKPIRKNELK LWQH+WRRC QK K K+ + ++SG Sbjct: 174 KGAVDFLVKPIRKNELKILWQHVWRRCQSSSGSGSESGTHQTQKSVKSKSIKKSDQDSGS 233 Query: 1007 SHXXXXXXXXXXXFSVGPNARDGSDNGSGTQSSWTKRAVEI-DSPQLVSSDHLSDSPDST 1183 S S+G NA DGS +GSG QSSWTK+AV++ DSP+ VS L D DST Sbjct: 234 SDENENG-------SIGLNASDGSSDGSGAQSSWTKKAVDVDDSPRAVS---LWDRVDST 283 Query: 1184 CAQVIHPRSEIGSNRWL-PTANKRNINNQKEKNDDSMGKYLEIGAPRNSSLAYQSSPNEM 1360 CAQV+H E SN+ + P A K + + D +MG+ LEI RN LA + + Sbjct: 284 CAQVVHSNPEFPSNQLVAPPAEKETQEHDDKFEDVTMGRDLEISIRRNCDLALEPKDEPL 343 Query: 1361 SVNPTEKQHENLISKNKSVDKIVIDK---------PTSET--ADLISSIARNTESKQAAR 1507 S + +N K+ S K+ + K P+S+ D SS + Q R Sbjct: 344 SKTTGIMRQDNSFEKSSSKWKMKVGKGPLDLSSESPSSKQMHEDGGSSFKAMSSHLQDNR 403 Query: 1508 ITDAPDCSSKMPHGNEMNNDSPINMPSKELGLKISETTRRGTE-----IHDERSILKRSN 1672 +AP+ K NE + + + + + ++ S RGT+ + D+R++L+RS Sbjct: 404 EPEAPNTHLKTLDTNE----ASVKISEELMHVEHSSKRHRGTKDDGTLVRDDRNVLRRSE 459 Query: 1673 LSAFTRYHTPMASDQGGATFRGSCSPQDNSSEAV--KTNSTCKMESN 1807 SAF+RY+ +++ GS S QDN+S+ + KT + SN Sbjct: 460 GSAFSRYNPASNANKISGGNLGSTSLQDNNSQDLIKKTEAAYDCHSN 506 Score = 84.3 bits (207), Expect = 2e-15 Identities = 41/54 (75%), Positives = 49/54 (90%) Frame = +2 Query: 2381 DLVCQNQLSQREAAVNKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQS 2542 +L +N++SQREAA+ KFRQKRKER F KKVRYQSRK+LAEQRPRVRGQFVR++ Sbjct: 659 NLADENKISQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKT 712
>Q9LVG4:APRR3_ARATH Two-component response regulator-like APRR3 - Arabidopsis thaliana| (Mouse-ear cress) Length = 495 Score = 233 bits (594), Expect = 3e-60 Identities = 166/474 (35%), Positives = 225/474 (47%), Gaps = 29/474 (6%) Frame = +2 Query: 479 LDEHKQQQQDRVIRWEKFLPVKTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAW 658 + + +QQ V++WE++LPV++L+VLLVENDD TRH+V ALL+ C YEV + + L+AW Sbjct: 41 ISQQQQQPLAHVVKWERYLPVRSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAW 100 Query: 659 QYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSK 838 + LED ++ IDLVLTEV MP SG GLLSKI SH K IPVIMMS +DSM VFKCLS Sbjct: 101 RILEDEKSCIDLVLTEVDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSN 160 Query: 839 GAVDFLVKPIRKNELKTLWQHIWRRC--XXXXXXXXXXXXQKCSKPKT----------GD 982 GAVDFLVKPIRKNELK LWQH+WRRC +K KP++ D Sbjct: 161 GAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGIHDKKSVKPESTQGSENDASISD 220 Query: 983 EYAKNSGGSHXXXXXXXXXXXFSVGPNARDGSDNGSGTQSSWTKRAVEIDSPQLVSSDHL 1162 E+ SG S N GSDNGSGTQSSWTKRA D+ S+ Sbjct: 221 EHRNESGSSGGL-------------SNQDGGSDNGSGTQSSWTKRA--SDTKSTSPSNQF 265 Query: 1163 SDSP------DSTCAQVIHPRSEIGSNRWLPTANKRNINNQKEKNDDSMGKYLEIGAPRN 1324 D+P ++ CA V NR +++ + SM K E Sbjct: 266 PDAPNKKGTYENGCAHV---------NRLKEAEDQKEQIGTGSQTGMSMSKKAEEPGDLE 316 Query: 1325 SSLAYQSSPNEMSVNPTEKQHENLISKNKSVDKIVIDKPTSETADLISSIARNTESKQAA 1504 + Y SV E+ +++ ++++ ++ P+S DL S Sbjct: 317 KNAKY-------SVQALERNNDDTLNRSSGNSQVESKAPSSNREDLQS------------ 357 Query: 1505 RITDAPDCSSKMPHGNEMNNDSPINMPSKELGLKISETTRRGTEIHD----ERSILKRSN 1672 + +T ++ E D +RS+L+ SN Sbjct: 358 ----------------------------------LEQTLKKTREDRDYKVGDRSVLRHSN 383 Query: 1673 LSAFTRYHTPMASDQGGATFR-GSCSPQDN------SSEAVKTNSTCKMESNSD 1813 LSAF++Y+ S + SCSP D+ S + N + S SD Sbjct: 384 LSAFSKYNNGATSAKKAPEENVESCSPHDSPIAKLLGSSSSSDNPLKQQSSGSD 437 Score = 70.9 bits (172), Expect = 3e-11 Identities = 37/55 (67%), Positives = 43/55 (78%), Gaps = 5/55 (9%) Frame = +2 Query: 2405 SQREAAVNKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVR-----QSGQED 2554 +QREAA+ KFR KRKER F KKVRY SRK+LAEQRP V+GQF+R +SG ED Sbjct: 440 AQREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFIRKRDDHKSGSED 494
>Q689G6:PRR95_ORYSJ Two-component response regulator-like PRR95 - Oryza sativa subsp.| japonica (Rice) Length = 623 Score = 180 bits (456), Expect = 3e-44 Identities = 134/444 (30%), Positives = 201/444 (45%), Gaps = 8/444 (1%) Frame = +2 Query: 518 RWEKFLPVKTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLV 697 R + LP +RVLL E DD TRH++ ALLRKCGY V +A +G+ AW L++ IDLV Sbjct: 33 RETRMLPRMPVRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEKSFNIDLV 92 Query: 698 LTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKN 877 LTEV +P +SG LLS I H CK IPVIMMS NDS+S VFKC+ KGA DFLVKPIRKN Sbjct: 93 LTEVELPLMSGFLLLSTIMEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRKN 152 Query: 878 ELKTLWQHIWRRCXXXXXXXXXXXXQKCSKPKTGDEYAKNSGGSHXXXXXXXXXXXFSVG 1057 EL+ LWQH+WR+ Q+ + + ++ + H +V Sbjct: 153 ELRNLWQHVWRKQLSSGVLDVQHTQQEDNLTERHEQKTGVTKAEHVTE---------NVV 203 Query: 1058 PNARDGSDNGSGTQSSWTKRAVEIDSPQLVSSDHLSDSPDSTCAQVIHPRSEIGSNRWLP 1237 + S+ S QSS T+ +E DS Q + ++ H +E + Sbjct: 204 HKNMECSEQESDAQSSCTRSELEADSRQTNNLLEYKQPMGRHFSKPDHKNTEKNGGTKIH 263 Query: 1238 TANKRNINNQKEKNDDSMGKYLEIGAPRNSSLAYQSSPNEMSVNPTEKQHENLISKNKSV 1417 +N N+ ++E+ ++SL + N+++ + E + Sbjct: 264 ASNDGNLIPRREE---------------DASLRRMTCSNDINCEKASRDMELV------- 301 Query: 1418 DKIVIDKPTSETADLISSIARNTESKQAARITDAPDCSSKMPHGNEMNNDSPINMPSK-- 1591 +ID + +AR + N+D ++P+ Sbjct: 302 --HIIDNQQKNNTHMEMDVAR---------------------ANSRGNDDKCFSIPAHQL 338 Query: 1592 ELGLKISETTRRGTEIHDERSILKRSNLSAFTRYHTPMASDQGGATFRGSCSPQ------ 1753 EL L+ S+ +R ++ +ER L S S F+ Y+ AS A +CS Sbjct: 339 ELSLRRSDYSRLESQEKNERRTLNHSTSSPFSLYNCRTASSTINAGDAQACSTSATHIDL 398 Query: 1754 DNSSEAVKTNSTCKMESNSDAAQI 1825 +N + KT S K E+N ++ Sbjct: 399 ENKNGDSKTPSQDKRETNQPPIRV 422 Score = 77.8 bits (190), Expect = 2e-13 Identities = 39/46 (84%), Positives = 42/46 (91%) Frame = +2 Query: 2402 LSQREAAVNKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 2539 LSQREAA+NKFR KRK+R F KKVRYQSRK LAEQRPRV+GQFVRQ Sbjct: 571 LSQREAALNKFRLKRKDRCFEKKVRYQSRKLLAEQRPRVKGQFVRQ 616
>Q6LA42:APRR5_ARATH Two-component response regulator-like APRR5 - Arabidopsis thaliana| (Mouse-ear cress) Length = 558 Score = 176 bits (445), Expect = 6e-43 Identities = 108/303 (35%), Positives = 158/303 (52%), Gaps = 13/303 (4%) Frame = +2 Query: 506 DRVIRWEKFLPVKTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNR 685 D +++WE+FLP LRVLLVE DD TR ++ ALLRKC Y V + +GL AW+ L+ Sbjct: 36 DGLVKWERFLPKIALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPES 95 Query: 686 IDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKP 865 +DL+LTEV +P +SG LL+ I H ICK IPVIMMS DS++TV+KC+ KGA D+LVKP Sbjct: 96 VDLILTEVDLPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKP 155 Query: 866 IRKNELKTLWQHIWRRCXXXXXXXXXXXXQKCSKPKTGDEYAKNSGGSHXXXXXXXXXXX 1045 +R+NEL+ LWQH+WRR + + K A NS G Sbjct: 156 LRRNELRNLWQHVWRR-QTSLAPDSFPWNESVGQQKAEGASANNSNGKRDDHVV------ 208 Query: 1046 FSVGPNARDGSDNGSGTQSSWTKRAVEIDSPQLVSSDHLSDSPDSTCAQVIHPRSEIGSN 1225 S NG QSS T+ +E +S + S D+ CA+ + + +N Sbjct: 209 ----------SGNGGDAQSSCTRPEMEGESADVEVS--ARDAVQMECAKSQFNETRLLAN 256 Query: 1226 RWLPTANKRNIN--------NQKEKNDDSMGKY-----LEIGAPRNSSLAYQSSPNEMSV 1366 L + I+ + ++S+ +Y L++ R ++ QSS + S+ Sbjct: 257 E-LQSKQAEAIDFMGASFRRTGRRNREESVAQYESRIELDLSLRRPNASENQSSGDRPSL 315 Query: 1367 NPT 1375 +P+ Sbjct: 316 HPS 318 Score = 72.4 bits (176), Expect = 9e-12 Identities = 34/47 (72%), Positives = 41/47 (87%) Frame = +2 Query: 2399 QLSQREAAVNKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 2539 Q QREAA+ KFR KRK+R + KKVRY+SRK+LAEQRPR++GQFVRQ Sbjct: 505 QSLQREAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQFVRQ 551
>Q8L500:APRR9_ARATH Two-component response regulator-like APRR9 - Arabidopsis thaliana| (Mouse-ear cress) Length = 468 Score = 170 bits (431), Expect = 3e-41 Identities = 77/151 (50%), Positives = 109/151 (72%), Gaps = 1/151 (0%) Frame = +2 Query: 464 SAPPGLDEHKQQ-QQDRVIRWEKFLPVKTLRVLLVENDDCTRHVVRALLRKCGYEVISAE 640 S+ G++ K + + V++WEK+LP LRVLLVE+D TR ++ ALLRKC Y+V++ Sbjct: 8 SSDDGMETIKNRVKSSEVVQWEKYLPKTVLRVLLVESDYSTRQIITALLRKCCYKVVAVS 67 Query: 641 NGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTV 820 +GL AW+ L++ + IDL+LTE+ +P +SG LL+ + H CK IPVIMMS DS+ V Sbjct: 68 DGLAAWEVLKEKSHNIDLILTELDLPSISGFALLALVMEHEACKNIPVIMMSSQDSIKMV 127 Query: 821 FKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 913 KC+ +GA D+L+KP+RKNELK LWQH+WRR Sbjct: 128 LKCMLRGAADYLIKPMRKNELKNLWQHVWRR 158 Score = 73.2 bits (178), Expect = 6e-12 Identities = 36/44 (81%), Positives = 40/44 (90%) Frame = +2 Query: 2405 SQREAAVNKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVR 2536 SQREAA+ KFR KRK+R F KKVRYQSRK+LAEQRPRV+GQFVR Sbjct: 415 SQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVR 458
>Q9LKL2:APRR1_ARATH Two-component response regulator-like APRR1 - Arabidopsis thaliana| (Mouse-ear cress) Length = 618 Score = 101 bits (252), Expect = 1e-20 Identities = 51/128 (39%), Positives = 73/128 (57%) Frame = +2 Query: 530 FLPVKTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEV 709 F+ +R+LL +ND + V LL +C Y+V + ++ L ID++L E+ Sbjct: 13 FIDRSRVRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDIILAEI 72 Query: 710 AMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKT 889 +P G+ +L IT + IPVIMMS+ D + V KCL GA D+LVKP+R NEL Sbjct: 73 DLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLN 132 Query: 890 LWQHIWRR 913 LW H+WRR Sbjct: 133 LWTHMWRR 140 Score = 67.8 bits (164), Expect = 2e-10 Identities = 35/63 (55%), Positives = 46/63 (73%), Gaps = 8/63 (12%) Frame = +2 Query: 2396 NQLSQREAAVNKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ--------SGQE 2551 N+L +RE A+ KFR+KR +R F KK+RY +RKRLAE+RPRV+GQFVR+ +GQ Sbjct: 528 NKLDRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKMNGVNVDLNGQP 587 Query: 2552 DEA 2560 D A Sbjct: 588 DSA 590
>Q689G9:PRR1_ORYSJ Two-component response regulator-like PRR1 - Oryza sativa subsp.| japonica (Rice) Length = 518 Score = 97.1 bits (240), Expect = 4e-19 Identities = 49/130 (37%), Positives = 72/130 (55%) Frame = +2 Query: 524 EKFLPVKTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLT 703 ++F+ +R+LL ++D + V LL C Y+V A++ L ID++L Sbjct: 20 QQFVDRSKVRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILA 79 Query: 704 EVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 EV +P +L I + + IP+IMMS D +S V KCL GA ++LVKP+R NEL Sbjct: 80 EVDLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNEL 139 Query: 884 KTLWQHIWRR 913 LW H+WRR Sbjct: 140 LNLWTHVWRR 149 Score = 67.8 bits (164), Expect = 2e-10 Identities = 34/49 (69%), Positives = 39/49 (79%) Frame = +2 Query: 2408 QREAAVNKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQSGQED 2554 +R AA+ KFR KRKER F KKVRY +RK+LAE RPRVRGQFVRQ+ D Sbjct: 442 RRAAALAKFRLKRKERCFDKKVRYVNRKKLAETRPRVRGQFVRQANYTD 490
>Q23917:REGA_DICDI 3',5'-cyclic-nucleotide phosphodiesterase regA - Dictyostelium| discoideum (Slime mold) Length = 793 Score = 93.6 bits (231), Expect = 4e-18 Identities = 61/197 (30%), Positives = 93/197 (47%), Gaps = 5/197 (2%) Frame = +2 Query: 338 SSSDIRGIGNGAVENQNGHALKPNEDKEWRGGSKEEDWPSTHSAPPGLDEHKQQQQDRVI 517 S+++ I N + N N L + + ++ PS+H DE+ + Sbjct: 105 SNNNNNNINNNNINNNNYEPLVNGHNNGFGDKLNDQPSPSSHRVSDFSDEYSPSK----- 159 Query: 518 RWEKFLPVKTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLV 697 +R+L+ ++DD R ++ LL+K Y V NG AW+Y+ Q + DLV Sbjct: 160 ----------VRILVADDDDVQRKILNNLLKKFHYNVTLVPNGEIAWEYINKGQQKYDLV 209 Query: 698 LTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKND-SMSTVFKCLSKGAVDFLVKPIRK 874 LT+V MP ++G LL +I H + + IPVI+MS + G DFL KPI K Sbjct: 210 LTDVMMPHITGFDLLQRINDHPVHRHIPVILMSGTAVDYKYANDTIKIGGQDFLTKPIAK 269 Query: 875 NELK----TLWQHIWRR 913 LK T+ Q IW+R Sbjct: 270 ELLKKKIDTVLQSIWQR 286
>Q940D0:ARR1_ARATH Two-component response regulator ARR1 - Arabidopsis thaliana| (Mouse-ear cress) Length = 690 Score = 89.0 bits (219), Expect = 1e-16 Identities = 47/122 (38%), Positives = 72/122 (59%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 LRVL+V++D ++ +LR C YEV A L ++ D+V+++V MP + Sbjct: 37 LRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPDMD 96 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIW 907 G LL + + +PVIMMS +DS S V K ++ GAVD+L+KP+R LK +WQH+ Sbjct: 97 GFKLLEHV---GLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHVV 153 Query: 908 RR 913 R+ Sbjct: 154 RK 155
>Q9FXD6:ARR11_ARATH Two-component response regulator ARR11 - Arabidopsis thaliana| (Mouse-ear cress) Length = 521 Score = 88.2 bits (217), Expect = 2e-16 Identities = 49/128 (38%), Positives = 77/128 (60%) Frame = +2 Query: 530 FLPVKTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEV 709 F PV LRVL+V++D ++ +L+KC YEV + +A + L + ++ D+V+++V Sbjct: 6 FSPVG-LRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDV 64 Query: 710 AMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKT 889 MP + G LL + + +PVIMMS + S V K + GA D+L+KPIR ELK Sbjct: 65 NMPDMDGFKLLEHV---GLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKI 121 Query: 890 LWQHIWRR 913 +WQH+ R+ Sbjct: 122 IWQHVLRK 129
>Q9ZWJ9:ARR2_ARATH Two-component response regulator ARR2 - Arabidopsis thaliana| (Mouse-ear cress) Length = 664 Score = 87.0 bits (214), Expect = 4e-16 Identities = 46/122 (37%), Positives = 70/122 (57%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 LRVL+V++D ++ +L C Y V A L +N D+V+++V MP + Sbjct: 28 LRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKNKNGFDIVISDVHMPDMD 87 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIW 907 G LL + + +PVIMMS +DS S V K ++ GAVD+L+KP+R LK +WQH+ Sbjct: 88 GFKLLEHV---GLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHVV 144 Query: 908 RR 913 R+ Sbjct: 145 RK 146
>O49397:ARR10_ARATH Two-component response regulator ARR10 - Arabidopsis thaliana| (Mouse-ear cress) Length = 552 Score = 86.7 bits (213), Expect = 5e-16 Identities = 43/122 (35%), Positives = 72/122 (59%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 +RVL V++D +++ LL++C Y V + A + L + +N+ DLV+++V MP + Sbjct: 17 MRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKNKFDLVISDVDMPDMD 76 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIW 907 G LL + + +PVIM+S + V K + GA D+L+KP+R ELK +WQH+ Sbjct: 77 GFKLLELV---GLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQHVV 133 Query: 908 RR 913 R+ Sbjct: 134 RK 135
>P62598:ARR12_ARATH Two-component response regulator ARR12 - Arabidopsis thaliana| (Mouse-ear cress) Length = 596 Score = 86.3 bits (212), Expect = 6e-16 Identities = 44/121 (36%), Positives = 71/121 (58%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 +RVL V++D ++ +LLR C Y V + A + L + +N+ DLV+++V MP + Sbjct: 17 MRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVISDVDMPDMD 76 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIW 907 G LL + + +PVIM+S + V K ++ GA D+L+KP+R ELK +WQH+ Sbjct: 77 GFKLLELV---GLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQHVV 133 Query: 908 R 910 R Sbjct: 134 R 134
>Q8L9Y3:ARR14_ARATH Two-component response regulator ARR14 - Arabidopsis thaliana| (Mouse-ear cress) Length = 382 Score = 80.9 bits (198), Expect = 3e-14 Identities = 44/122 (36%), Positives = 72/122 (59%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 LR+L+V++D ++ +L + Y+V A L + ++ DLVL++V MP ++ Sbjct: 11 LRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDVHMPGMN 70 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIW 907 G LL ++ + +PVIMMS + +TV ++ GA D+L+KPIR ELK +WQH+ Sbjct: 71 GYNLLQQVGLLEM--DLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQHVV 128 Query: 908 RR 913 RR Sbjct: 129 RR 130
>Q9ZWS7:ARR7_ARATH Two-component response regulator ARR7 - Arabidopsis thaliana| (Mouse-ear cress) Length = 206 Score = 76.3 bits (186), Expect = 7e-13 Identities = 45/130 (34%), Positives = 75/130 (57%), Gaps = 9/130 (6%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYL-----EDVQN----RIDLVL 700 L VL V++ R V+ LLR +V + E+G A QYL + N +++L++ Sbjct: 24 LHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGLDGGKGASNLKDLKVNLIV 83 Query: 701 TEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNE 880 T+ +MP LSG LL KI S + +PV++MS + + + +CL +GA +FL+KP++ + Sbjct: 84 TDYSMPGLSGYDLLKKIKESSAFREVPVVIMSSENILPRIQECLKEGAEEFLLKPVKLAD 143 Query: 881 LKTLWQHIWR 910 +K + Q I R Sbjct: 144 VKRIKQLIMR 153
>Q9LZJ8:ARR20_ARATH Putative two-component response regulator ARR20 - Arabidopsis| thaliana (Mouse-ear cress) Length = 426 Score = 74.7 bits (182), Expect = 2e-12 Identities = 45/130 (34%), Positives = 75/130 (57%) Frame = +2 Query: 524 EKFLPVKTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLT 703 E+FL K+ RVLLV D + ++ L+ + Y+V E+G +A +L ++ IDLV+ Sbjct: 34 EEFL-TKSNRVLLVGAD--SNSSLKNLMTQYSYQVTKYESGEEAMAFLMKNKHEIDLVIW 90 Query: 704 EVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 + MP ++G+ L+ I +PV++MS TV + + GA DFLVKP+ K + Sbjct: 91 DFHMPDINGLDALNIIGKQM---DLPVVIMSHEYKKETVMESIKYGACDFLVKPVSKEVI 147 Query: 884 KTLWQHIWRR 913 LW+H++R+ Sbjct: 148 AVLWRHVYRK 157
>O82798:ARR4_ARATH Two-component response regulator ARR4 - Arabidopsis thaliana| (Mouse-ear cress) Length = 259 Score = 73.6 bits (179), Expect = 4e-12 Identities = 41/133 (30%), Positives = 76/133 (57%), Gaps = 9/133 (6%) Frame = +2 Query: 533 LPVKTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYL---------EDVQNR 685 L + + VL V++ R V+ LLR +V + ++G A ++L E + + Sbjct: 29 LDLDEVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEKASAEFDRLK 88 Query: 686 IDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKP 865 +DL++T+ MP ++G LL KI S + +PV++MS + ++ + +CL +GA DFL+KP Sbjct: 89 VDLIITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFLLKP 148 Query: 866 IRKNELKTLWQHI 904 ++ ++K L H+ Sbjct: 149 VKLADVKRLRSHL 161
>Q9ZWS9:ARR3_ARATH Two-component response regulator ARR3 - Arabidopsis thaliana| (Mouse-ear cress) Length = 231 Score = 73.2 bits (178), Expect = 6e-12 Identities = 41/130 (31%), Positives = 75/130 (57%), Gaps = 9/130 (6%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYL---------EDVQNRIDLVL 700 + VL V++ R V+ LLR +V + ++G A ++L E + ++DL++ Sbjct: 33 VHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKAAVEFDRLKVDLII 92 Query: 701 TEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNE 880 T+ MP ++G LL KI + K +PV++MS + M+ + +CL +GA DFL+KP++ + Sbjct: 93 TDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAEDFLLKPVKLAD 152 Query: 881 LKTLWQHIWR 910 +K L ++ R Sbjct: 153 VKRLRSYLTR 162
>Q9ZWS6:ARR6_ARATH Two-component response regulator ARR6 - Arabidopsis thaliana| (Mouse-ear cress) Length = 186 Score = 72.4 bits (176), Expect = 9e-12 Identities = 42/131 (32%), Positives = 73/131 (55%), Gaps = 9/131 (6%) Frame = +2 Query: 527 KFLPVKTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLE-DVQNR------ 685 KF L VL V++ R + LLR +V ++ A QYL DV+ + Sbjct: 18 KFGSPDPLHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDVEEKSVGFED 77 Query: 686 --IDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLV 859 ++L++T+ +MP ++G LL KI S + +PV++MS + + + +CL +GA DFL+ Sbjct: 78 LKVNLIMTDYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGAEDFLL 137 Query: 860 KPIRKNELKTL 892 KP++ +++K L Sbjct: 138 KPVKLSDVKRL 148
>Q7G8V2:ARR15_ARATH Two-component response regulator ARR15 - Arabidopsis thaliana| (Mouse-ear cress) Length = 206 Score = 72.0 bits (175), Expect = 1e-11 Identities = 44/130 (33%), Positives = 74/130 (56%), Gaps = 9/130 (6%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLE-DVQN--------RIDLVL 700 L VL V++ R V+ LL+ +V + E+G A QYL D N +++L++ Sbjct: 18 LHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDNGSSGLKDLKVNLIV 77 Query: 701 TEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNE 880 T+ +MP L+G LL KI S + IPV++MS + + +C+ +GA +FL+KP++ + Sbjct: 78 TDYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCMIEGAEEFLLKPVKLAD 137 Query: 881 LKTLWQHIWR 910 +K L + I R Sbjct: 138 VKRLKELIMR 147
>Q9SB04:ARR5_ARATH Two-component response regulator ARR5 - Arabidopsis thaliana| (Mouse-ear cress) Length = 184 Score = 71.2 bits (173), Expect = 2e-11 Identities = 43/127 (33%), Positives = 71/127 (55%), Gaps = 10/127 (7%) Frame = +2 Query: 542 KTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLE-DVQN---------RID 691 K L VL V++ R + LLR +V ++ A QYL D +N +I+ Sbjct: 23 KLLHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENNSSVGFEDLKIN 82 Query: 692 LVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIR 871 L++T+ +MP ++G LL KI S + IPV++MS + + + +CL +GA DFL+KP++ Sbjct: 83 LIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPVK 142 Query: 872 KNELKTL 892 ++K L Sbjct: 143 LADVKRL 149
>Q9FPR6:ARR17_ARATH Two-component response regulator ARR17 - Arabidopsis thaliana| (Mouse-ear cress) Length = 153 Score = 71.2 bits (173), Expect = 2e-11 Identities = 40/129 (31%), Positives = 76/129 (58%), Gaps = 10/129 (7%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYL--------EDVQN--RIDLV 697 L VL V+++ R +V +L+ +V +AENGL A +YL + + N +++L+ Sbjct: 20 LHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGLGDPQQTDSLTNVMKVNLI 79 Query: 698 LTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKN 877 +T+ MP ++G LL K+ S K +PV+++S + + + KCL+ GA F+ KP++ + Sbjct: 80 ITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRINKCLASGAQMFMQKPLKLS 139 Query: 878 ELKTLWQHI 904 +++ L H+ Sbjct: 140 DVEKLKCHL 148
>Q9FGT7:ARR18_ARATH Two-component response regulator ARR18 - Arabidopsis thaliana| (Mouse-ear cress) Length = 635 Score = 70.9 bits (172), Expect = 3e-11 Identities = 44/132 (33%), Positives = 69/132 (52%) Frame = +2 Query: 518 RWEKFLPVKTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLV 697 R +KF PV +RVL V+++ + LL +C Y V A + L + N DLV Sbjct: 10 RHDKF-PVG-MRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLV 67 Query: 698 LTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKN 877 +++V MP G LL + +PVIM+S + +V K + GA D+LVKP+ Sbjct: 68 ISDVEMPDTDGFKLLEI----GLEMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLK 123 Query: 878 ELKTLWQHIWRR 913 EL+ +W H+ ++ Sbjct: 124 ELQNIWHHVVKK 135
>P71403:CHEY_HELPY Chemotaxis protein cheY homolog - Helicobacter pylori| (Campylobacter pylori) Length = 124 Score = 68.6 bits (166), Expect = 1e-10 Identities = 36/114 (31%), Positives = 67/114 (58%), Gaps = 1/114 (0%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYE-VISAENGLDAWQYLEDVQNRIDLVLTEVAMPCL 724 +++L+V++ R +++ L + GYE V+ AE+G++AW+ L D +++T+ MP + Sbjct: 1 MKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKL-DANADTKVLITDWNMPEM 59 Query: 725 SGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 886 +G+ L+ K+ S S K IP+IM++ + V L G +++VKP LK Sbjct: 60 NGLDLVKKVRSDSRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKPFTPQVLK 113
>O23100:APRR8_ARATH Putative two-component response regulator-like APRR8 - Arabidopsis| thaliana (Mouse-ear cress) Length = 367 Score = 67.0 bits (162), Expect = 4e-10 Identities = 75/327 (22%), Positives = 133/327 (40%), Gaps = 25/327 (7%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGI 733 VLL+++D + ++RKCGY+V++ D + + +IDLVL E + ++ Sbjct: 16 VLLLDSDATCLANLSEMIRKCGYKVVATTRADDLPLIINNKDKKIDLVLAEFRLIEMNKY 75 Query: 734 GLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 913 LL KI SIC+ IPV+ +S + +CL +GA L KP+ +N+ K LWQ R Sbjct: 76 ELLEKI--RSICE-IPVV-VSGAHVKDAIVECLCRGAKLCLEKPLMENDFKILWQFTVSR 131 Query: 914 CXXXXXXXXXXXXQK----CSKPKTGDEYAKNSGGSHXXXXXXXXXXXFSVGPNARD--- 1072 +K G E KN+ S N R Sbjct: 132 QRNFRSQIDINPPEKNHSITHTQSLGAELKKNNNNSEVETEDLDKYKDELGQGNKRKERA 191 Query: 1073 GSDNGSGTQSSWTKRAVEIDSPQLVSSDHLSDSPDSTCAQVIHPRSEIGSNRWLPTANKR 1252 +D G T+ + + P+L+ +D L + + + E + R PT K+ Sbjct: 192 DTDTGEHTEKNNGSDLGDQKKPKLLFADDLQNE----TLEAVPNIEEANNERKAPTEIKK 247 Query: 1253 NINNQKEKNDD-----------SMGKYLEIGAPRNS-------SLAYQSSPNEMSVNPTE 1378 N + ++K+ + S ++++ A + S+ P+E+ ++P E Sbjct: 248 NGESSEKKSPELVCMEEELQKWSAESFIDLTASVENESQDPLESVGDSVGPHEIPLSPPE 307 Query: 1379 KQHENLISKNKSVDKIVIDKPTSETAD 1459 + N+ ++ + PT E D Sbjct: 308 SSNNNVAAQ--------LQMPTHEALD 326
>Q9APD9:ZRAR_KLEOX Transcriptional regulatory protein zraR - Klebsiella oxytoca| Length = 443 Score = 66.6 bits (161), Expect = 5e-10 Identities = 41/112 (36%), Positives = 69/112 (61%), Gaps = 1/112 (0%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRI-DLVLTEVAMPCLSG 730 +L+V++D +++ALLR GY V A NGL A LE V+ ++ DLVL ++ M + G Sbjct: 8 ILVVDDDISHCTILQALLRGWGYRVALANNGLQA---LEKVREKVFDLVLCDIRMAEMDG 64 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 886 I L +I + + IPV++M+ S+ T + L GA+D+L+KP+ ++L+ Sbjct: 65 IETLKEIKTFN--PSIPVLIMTAYSSVDTAVEALKSGALDYLIKPLDFDKLQ 114
>Q9ZM64:CHEY_HELPJ Chemotaxis protein cheY homolog - Helicobacter pylori J99| (Campylobacter pylori J99) Length = 124 Score = 66.2 bits (160), Expect = 7e-10 Identities = 34/114 (29%), Positives = 67/114 (58%), Gaps = 1/114 (0%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYE-VISAENGLDAWQYLEDVQNRIDLVLTEVAMPCL 724 +++L+V++ R +++ L + GYE V+ AE+G++AW+ L D +++T+ MP + Sbjct: 1 MKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKL-DANADTKVLITDWNMPEM 59 Query: 725 SGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 886 +G+ L+ K+ + + K IP+IM++ + V L G +++VKP LK Sbjct: 60 NGLDLVKKVRADNRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKPFTPQVLK 113
>Q9SHC2:ARR16_ARATH Two-component response regulator ARR16 - Arabidopsis thaliana| (Mouse-ear cress) Length = 164 Score = 65.9 bits (159), Expect = 9e-10 Identities = 42/131 (32%), Positives = 71/131 (54%), Gaps = 12/131 (9%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLE--DVQNRID---------- 691 L VL V+++ R +V LL+ +V +AEN L A +YL D ID Sbjct: 29 LHVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGDQNQHIDALTCNVMKVS 88 Query: 692 LVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIR 871 L++T+ MP ++G LL K+ S + +PV++MS + + + KCL+ GA F+ KP++ Sbjct: 89 LIITDYCMPGMTGFELLKKVKESSNLREVPVVIMSSENIPTRINKCLASGAQMFMQKPLK 148 Query: 872 KNELKTLWQHI 904 +++ L H+ Sbjct: 149 LADVEKLKCHL 159
>Q9M9B9:ARR19_ARATH Putative two-component response regulator ARR19 - Arabidopsis| thaliana (Mouse-ear cress) Length = 407 Score = 65.5 bits (158), Expect = 1e-09 Identities = 34/120 (28%), Positives = 68/120 (56%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGI 733 VL+V+ + T ++ ++++ Y+V + A +L ++ I++V+ + MP + G+ Sbjct: 36 VLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFHMPGIDGL 95 Query: 734 GLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 913 L ITS +PV++MS ++ +V K GA D++VKP+++ + +WQHI R+ Sbjct: 96 QALKSITSKL---DLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQHIVRK 152
>O80366:ARR9_ARATH Two-component response regulator ARR9 - Arabidopsis thaliana| (Mouse-ear cress) Length = 234 Score = 64.7 bits (156), Expect = 2e-09 Identities = 37/138 (26%), Positives = 71/138 (51%), Gaps = 19/138 (13%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQN----------------- 682 VL V++ R ++ LL+K +V + ++G A ++L Q+ Sbjct: 11 VLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSNDPNAFSKAPVNHQ 70 Query: 683 --RIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFL 856 ++L++T+ MP ++G LL K+ S + IPV++MS + + + +CL +GA +F Sbjct: 71 VVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLEEGAEEFF 130 Query: 857 VKPIRKNELKTLWQHIWR 910 +KP+R +L L H+ + Sbjct: 131 LKPVRLADLNKLKPHMMK 148
>Q8X613:ZRAR_ECO57 Transcriptional regulatory protein zraR - Escherichia coli O157:H7| Length = 441 Score = 63.9 bits (154), Expect = 3e-09 Identities = 41/112 (36%), Positives = 67/112 (59%), Gaps = 1/112 (0%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRI-DLVLTEVAMPCLSG 730 +L+V++D +++ALLR GY V A +G A LE V+ R+ DLVL +V M + G Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQA---LEQVRERVFDLVLCDVRMAEMDG 64 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 886 I L +I + + IPV++M+ S+ T + L GA+D+L+KP+ + L+ Sbjct: 65 IATLKEIKA--LNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQ 114
>O80365:ARR8_ARATH Two-component response regulator ARR8 - Arabidopsis thaliana| (Mouse-ear cress) Length = 225 Score = 62.8 bits (151), Expect = 8e-09 Identities = 36/138 (26%), Positives = 73/138 (52%), Gaps = 19/138 (13%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYL-------------------EDV 676 VL V++ R ++ LL+K +V + ++G A ++L ++V Sbjct: 11 VLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALSTSPQIHQEV 70 Query: 677 QNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFL 856 + I+L++T+ MP ++G LL K+ + + IPV++MS + + + +CL +GA +F Sbjct: 71 E--INLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLEEGAEEFF 128 Query: 857 VKPIRKNELKTLWQHIWR 910 +KP++ +L L H+ + Sbjct: 129 LKPVKLADLTKLKPHMMK 146
>P14375:ZRAR_ECOLI Transcriptional regulatory protein zraR - Escherichia coli| Length = 441 Score = 62.4 bits (150), Expect = 1e-08 Identities = 40/112 (35%), Positives = 67/112 (59%), Gaps = 1/112 (0%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRI-DLVLTEVAMPCLSG 730 +L+V++D +++ALLR GY V A +G A LE V+ ++ DLVL +V M + G Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQA---LEQVREQVFDLVLCDVRMAEMDG 64 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 886 I L +I + + IPV++M+ S+ T + L GA+D+L+KP+ + L+ Sbjct: 65 IATLKEIKA--LNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQ 114
>P46384:PILG_PSEAE Protein pilG - Pseudomonas aeruginosa| Length = 135 Score = 61.6 bits (148), Expect = 2e-08 Identities = 36/112 (32%), Positives = 57/112 (50%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 L+V+++++ R LL+K G +VI+A +G DA + D I + ++ MP L Sbjct: 8 LKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNI--IFVDIMMPRLD 65 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 G + I ++S K PVIM+S D + K G+ +L KP K EL Sbjct: 66 GYQTCALIKNNSAFKSTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEEL 117
>P25852:ZRAR_SALTY Transcriptional regulatory protein zraR - Salmonella typhimurium| Length = 441 Score = 60.8 bits (146), Expect = 3e-08 Identities = 39/112 (34%), Positives = 67/112 (59%), Gaps = 1/112 (0%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRI-DLVLTEVAMPCLSG 730 +L+V++D +++ALLR GY V A +G DA L V+ ++ DLVL +V M + G Sbjct: 8 ILVVDDDVSHCTILQALLRGWGYNVALAYSGHDA---LAQVREKVFDLVLCDVRMAEMDG 64 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 886 I L +I + + IP+++M+ S+ T + L GA+D+L+KP+ + L+ Sbjct: 65 IATLKEIKA--LNPAIPILIMTAFSSVETAVEALKAGALDYLIKPLDFDRLQ 114
>Q8Z333:ZRAR_SALTI Transcriptional regulatory protein zraR - Salmonella typhi| Length = 441 Score = 60.8 bits (146), Expect = 3e-08 Identities = 39/112 (34%), Positives = 67/112 (59%), Gaps = 1/112 (0%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRI-DLVLTEVAMPCLSG 730 +L+V++D +++ALLR GY V A +G DA L V+ ++ DLVL +V M + G Sbjct: 8 ILVVDDDVSHCTILQALLRGWGYNVALAYSGHDA---LAQVREKVFDLVLCDVRMAEMDG 64 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 886 I L +I + + IP+++M+ S+ T + L GA+D+L+KP+ + L+ Sbjct: 65 IATLKEIKA--LNPAIPILIMTAFSSVETAVEALKAGALDYLIKPLDFDRLQ 114
>P18769:FRZE_MYXXA Gliding motility regulatory protein - Myxococcus xanthus| Length = 777 Score = 60.5 bits (145), Expect = 4e-08 Identities = 40/107 (37%), Positives = 58/107 (54%) Frame = +2 Query: 542 KTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPC 721 K LRVLLV++ R AL++ G+ V A++G +A Y++ N DL+LT+V MP Sbjct: 657 KRLRVLLVDDSPIARATEGALVKALGHSVEEAQDGEEA--YVKVQNNTYDLILTDVQMPK 714 Query: 722 LSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVK 862 L G L ++ S IPVI++S S + L GA +LVK Sbjct: 715 LDGFSLARRLKSTPAVARIPVIILSSLASPEDKRRGLDAGADAYLVK 761
>P10576:NTRC_BRASR Nitrogen assimilation regulatory protein - Bradyrhizobium sp.| (strain RP501 Parasponia) Length = 480 Score = 60.1 bits (144), Expect = 5e-08 Identities = 36/113 (31%), Positives = 59/113 (52%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGI 733 +L+ ++D R V+ L + GYEV N W+++ Q DLV+T+V MP + Sbjct: 6 ILVADDDTAIRTVLNQALSRAGYEVRLTGNAATLWRWVS--QGEGDLVITDVVMPDENAF 63 Query: 734 GLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTL 892 LL +I + +PVI+MS ++ T + +GA ++L KP EL T+ Sbjct: 64 DLLPRIKK--MRPNLPVIVMSAQNTFMTAIRPSERGAYEYLPKPFDLKELITI 114
>P45671:NTRC_AZOBR Nitrogen assimilation regulatory protein - Azospirillum brasilense| Length = 481 Score = 60.1 bits (144), Expect = 5e-08 Identities = 34/110 (30%), Positives = 61/110 (55%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGI 733 +L+ ++D R V+ L + G+EV + N W+++ D Q DL++T+V MP +G+ Sbjct: 6 ILVADDDRAIRTVLTQALARLGHEVRTTGNASTLWRWVADGQG--DLIITDVVMPDENGL 63 Query: 734 GLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 L+ +I I + +I+MS +++ T K +GA ++L KP EL Sbjct: 64 DLIPRIKK--IRPDLRIIVMSAQNTLITAVKAAERGAFEYLPKPFDLKEL 111
>A1W0A5:CHEY_CAMJJ Chemotaxis protein cheY homolog - Campylobacter jejuni subsp.| jejuni serotype O:23/36 (strain 81-176) Length = 130 Score = 60.1 bits (144), Expect = 5e-08 Identities = 29/114 (25%), Positives = 67/114 (58%), Gaps = 1/114 (0%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYE-VISAENGLDAWQYLEDVQNRIDLVLTEVAMPCL 724 +++L+V++ R +++ L + G++ V+ AE+G++AW L ++ + +++T+ MP + Sbjct: 1 MKLLVVDDSSTMRRIIKNTLTRLGHDDVLEAEHGVEAWDLLTKNED-VKVLITDWNMPEM 59 Query: 725 SGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 886 +G+ L+ K+ + + +P+IM++ + V L G +++VKP LK Sbjct: 60 NGLELVKKVRAEKKYEDMPIIMVTTEGGKAEVITALKAGVNNYIVKPFTPQVLK 113
>Q0P9D6:CHEY_CAMJE Chemotaxis protein cheY homolog - Campylobacter jejuni| Length = 130 Score = 60.1 bits (144), Expect = 5e-08 Identities = 29/114 (25%), Positives = 67/114 (58%), Gaps = 1/114 (0%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYE-VISAENGLDAWQYLEDVQNRIDLVLTEVAMPCL 724 +++L+V++ R +++ L + G++ V+ AE+G++AW L ++ + +++T+ MP + Sbjct: 1 MKLLVVDDSSTMRRIIKNTLTRLGHDDVLEAEHGVEAWDLLTKNED-VKVLITDWNMPEM 59 Query: 725 SGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 886 +G+ L+ K+ + + +P+IM++ + V L G +++VKP LK Sbjct: 60 NGLELVKKVRAEKKYEDMPIIMVTTEGGKAEVITALKAGVNNYIVKPFTPQVLK 113
>Q06065:ATOC_ECOLI Acetoacetate metabolism regulatory protein atoC - Escherichia coli| Length = 461 Score = 60.1 bits (144), Expect = 5e-08 Identities = 36/116 (31%), Positives = 60/116 (51%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 R+L+V+++D R ++ G+E A NG A D+ D+VL ++ MP + G Sbjct: 6 RILIVDDEDNVRRMLSTAFALQGFETHCANNGRTALHLFADIHP--DVVLMDIRMPEMDG 63 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQ 898 I L ++ SH PVI+M+ + T + L GA D+++KP +EL + Q Sbjct: 64 IKALKEMRSHET--RTPVILMTAYAEVETAVEALRCGAFDYVIKPFDLDELNLIVQ 117
>Q9FJ16:APRR4_ARATH Putative two-component response regulator-like APRR4 - Arabidopsis| thaliana (Mouse-ear cress) Length = 292 Score = 60.1 bits (144), Expect = 5e-08 Identities = 37/122 (30%), Positives = 67/122 (54%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 LRVL+ + D ++ L+K Y+V A L + +NR DL + +V Sbjct: 42 LRVLVFDEDPSYLLILERHLQKFQYQVTICNEVNKAMHTLRNHRNRFDLAMIQVNNAEGD 101 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIW 907 LS+I S +P+I++S++DS+ +V K + GA D+L+KPIR +L+ +++H+ Sbjct: 102 IFRFLSEIGSEM---DLPIIIISEDDSVKSVKKWMINGAADYLIKPIRPEDLRIVFKHLV 158 Query: 908 RR 913 ++ Sbjct: 159 KK 160
>Q9TLQ4:YCF27_CYACA Probable transcriptional regulator ycf27 - Cyanidium caldarium| Length = 249 Score = 59.7 bits (143), Expect = 6e-08 Identities = 38/120 (31%), Positives = 65/120 (54%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGI 733 +L+V++++ R +++ L GY V +A NG +A + + IDL++ +V MP L G Sbjct: 14 LLIVDDENNIRKILQTRLTLLGYSVSTACNGEEALKIF--TTHSIDLIILDVMMPKLDGY 71 Query: 734 GLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 913 G+ +I S IP+IM++ + + L GA D+++KP EL+ Q I RR Sbjct: 72 GVCQEIRKES---DIPIIMLTALEDVLDKVTGLELGADDYVIKPFSPRELEARIQSILRR 128
>P43501:PILH_PSEAE Protein pilH - Pseudomonas aeruginosa| Length = 121 Score = 59.3 bits (142), Expect = 8e-08 Identities = 34/111 (30%), Positives = 60/111 (54%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 R+L+V++ + + A+L K G++V+ AENG D Q + D+VL ++ MP L+G Sbjct: 3 RILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALAR--QEKPDVVLMDIVMPGLNG 60 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 ++T + IPVI+++ D + +GA D+L KP+ + L Sbjct: 61 FQATRQLTKDAETSAIPVIIVTTKDQETDKVWGKRQGARDYLTKPVDEETL 111
>O50055:COL1_ARATH Zinc finger protein CONSTANS-LIKE 1 - Arabidopsis thaliana (Mouse-ear| cress) Length = 355 Score = 59.3 bits (142), Expect = 8e-08 Identities = 26/53 (49%), Positives = 39/53 (73%) Frame = +2 Query: 2411 REAAVNKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQSGQEDEAGQA 2569 REA V ++R+K+K R F K +RY SRK AE+RPR++G+F ++ ++EA QA Sbjct: 286 REARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKDVDEEANQA 338
>Q83RR0:PHOP_SHIFL Virulence transcriptional regulatory protein phoP - Shigella| flexneri Length = 223 Score = 58.9 bits (141), Expect = 1e-07 Identities = 32/122 (26%), Positives = 68/122 (55%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 +RVL+VE++ RH ++ ++ G++V AE+ +A YL ++ D+ + ++ +P Sbjct: 1 MRVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLN--EHLPDIAIVDLGLPDED 58 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIW 907 G+ L+ + S+ + +P+++++ +S + LS GA D++ KP E+ Q + Sbjct: 59 GLSLIRRWRSNDV--SLPILVLTARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALM 116 Query: 908 RR 913 RR Sbjct: 117 RR 118
>Q8CXZ9:PHOP_ECOL6 Transcriptional regulatory protein phoP - Escherichia coli O6| Length = 223 Score = 58.9 bits (141), Expect = 1e-07 Identities = 32/122 (26%), Positives = 68/122 (55%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 +RVL+VE++ RH ++ ++ G++V AE+ +A YL ++ D+ + ++ +P Sbjct: 1 MRVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLN--EHLPDIAIVDLGLPDED 58 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIW 907 G+ L+ + S+ + +P+++++ +S + LS GA D++ KP E+ Q + Sbjct: 59 GLSLIRRWRSNDV--SLPILVLTARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALM 116 Query: 908 RR 913 RR Sbjct: 117 RR 118
>Q8X738:PHOP_ECO57 Transcriptional regulatory protein phoP - Escherichia coli O157:H7| Length = 223 Score = 58.9 bits (141), Expect = 1e-07 Identities = 32/122 (26%), Positives = 68/122 (55%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 +RVL+VE++ RH ++ ++ G++V AE+ +A YL ++ D+ + ++ +P Sbjct: 1 MRVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLN--EHLPDIAIVDLGLPDED 58 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIW 907 G+ L+ + S+ + +P+++++ +S + LS GA D++ KP E+ Q + Sbjct: 59 GLSLICRWRSNDV--SLPILVLTARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALM 116 Query: 908 RR 913 RR Sbjct: 117 RR 118
>Q1XDE4:YCF29_PORYE Probable transcriptional regulator ycf29 - Porphyra yezoensis| Length = 222 Score = 58.5 bits (140), Expect = 1e-07 Identities = 35/121 (28%), Positives = 59/121 (48%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 +++LVEND ++ L G+ V A NGL+A Q DL+++++ MP ++G Sbjct: 4 KLMLVENDIVLSKAIQEYLIDQGFNVYIANNGLEALNLA--YQYNFDLIISDIMMPLVNG 61 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWR 910 LL+K+ + IPVI ++ K G +L KP NEL ++ ++ Sbjct: 62 YELLAKLKKNKALSKIPVIFLTAKGMTKDRIKGYDMGCYGYLSKPFDPNELLSIINNLIA 121 Query: 911 R 913 R Sbjct: 122 R 122
>P23836:PHOP_ECOLI Transcriptional regulatory protein phoP - Escherichia coli| Length = 223 Score = 58.5 bits (140), Expect = 1e-07 Identities = 32/122 (26%), Positives = 68/122 (55%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 +RVL+VE++ RH ++ ++ G++V AE+ +A YL ++ D+ + ++ +P Sbjct: 1 MRVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLN--EHIPDIAIVDLGLPDED 58 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIW 907 G+ L+ + S+ + +P+++++ +S + LS GA D++ KP E+ Q + Sbjct: 59 GLSLIRRWRSNDV--SLPILVLTARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALM 116 Query: 908 RR 913 RR Sbjct: 117 RR 118
>P10577:NTRC_RHIME Nitrogen assimilation regulatory protein - Rhizobium meliloti| (Sinorhizobium meliloti) Length = 484 Score = 58.5 bits (140), Expect = 1e-07 Identities = 35/110 (31%), Positives = 55/110 (50%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGI 733 +L+ ++D R V+ L + GY+V N W+++ DLV+T+V MP + Sbjct: 6 ILVADDDAAIRTVLNQALSRAGYDVRITSNAATLWRWIAAGDG--DLVVTDVVMPDENAF 63 Query: 734 GLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 LL +I +PV++MS ++ T K KGA D+L KP EL Sbjct: 64 DLLPRIKKAR--PDLPVLVMSAQNTFMTAIKASEKGAYDYLPKPFDLTEL 111
>P14146:PHOP_SALTY Virulence transcriptional regulatory protein phoP - Salmonella| typhimurium Length = 224 Score = 58.2 bits (139), Expect = 2e-07 Identities = 33/122 (27%), Positives = 67/122 (54%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 +RVL+VE++ RH ++ L+ G++V +AE+ +A YL ++ D+ + ++ +P Sbjct: 2 MRVLVVEDNALLRHHLKVQLQDSGHQVDAAEDAREADYYLN--EHLPDIAIVDLGLPDED 59 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIW 907 G+ L+ + S + +PV++++ + + LS GA D++ KP E+ Q + Sbjct: 60 GLSLIRRWRSSDV--SLPVLVLTAREGWQDKVEVLSSGADDYVTKPFHIEEVMARMQALM 117 Query: 908 RR 913 RR Sbjct: 118 RR 119
>Q8Z7H2:PHOP_SALTI Virulence transcriptional regulatory protein phoP - Salmonella| typhi Length = 224 Score = 58.2 bits (139), Expect = 2e-07 Identities = 33/122 (27%), Positives = 67/122 (54%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 +RVL+VE++ RH ++ L+ G++V +AE+ +A YL ++ D+ + ++ +P Sbjct: 2 MRVLVVEDNALLRHHLKVQLQDSGHQVDAAEDAREADYYLN--EHLPDIAIVDLGLPDED 59 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIW 907 G+ L+ + S + +PV++++ + + LS GA D++ KP E+ Q + Sbjct: 60 GLSLIRRWRSSDV--SLPVLVLTAREGWQDKVEVLSSGADDYVTKPFHIEEVMARMQALM 117 Query: 908 RR 913 RR Sbjct: 118 RR 119
>Q5PMJ1:PHOP_SALPA Virulence transcriptional regulatory protein phoP - Salmonella| paratyphi-a Length = 224 Score = 58.2 bits (139), Expect = 2e-07 Identities = 33/122 (27%), Positives = 67/122 (54%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 +RVL+VE++ RH ++ L+ G++V +AE+ +A YL ++ D+ + ++ +P Sbjct: 2 MRVLVVEDNALLRHHLKVQLQDSGHQVDAAEDAREADYYLN--EHLPDIAIVDLGLPDED 59 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIW 907 G+ L+ + S + +PV++++ + + LS GA D++ KP E+ Q + Sbjct: 60 GLSLIRRWRSSDV--SLPVLVLTAREGWQDKVEVLSSGADDYVTKPFHIEEVMARMQALM 117 Query: 908 RR 913 RR Sbjct: 118 RR 119
>P54443:YRKP_BACSU Uncharacterized sensory transduction protein yrkP - Bacillus| subtilis Length = 231 Score = 57.4 bits (137), Expect = 3e-07 Identities = 34/111 (30%), Positives = 59/111 (53%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 R+L+VE+D+ ++ L + GYEV+ A++G A Q + D +DLV+ ++ MP +SG Sbjct: 4 RILVVEDDEDIGDLLEESLTRAGYEVLRAKDGKRALQLVND---SLDLVILDIMMPGISG 60 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 I I S +P++ ++ S + L G D++ KP + EL Sbjct: 61 IETCQHIRKSS---NVPILFLTARSSTLDKTEGLLAGGDDYMTKPFSEEEL 108
>P28835:YCF27_PORAE Probable transcriptional regulator ycf27 - Porphyridium aerugineum| Length = 240 Score = 57.4 bits (137), Expect = 3e-07 Identities = 34/121 (28%), Positives = 65/121 (53%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 ++L+++++ R ++ L GY+VISA +G +A + + +LV+ ++ MP L G Sbjct: 5 KILVIDDEASIRRILETRLSIIGYDVISAADGEEALSIFK--REHPNLVVLDLMMPKLDG 62 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWR 910 G+ ++ S +P+IM++ +S L GA D++VKP EL+ + + R Sbjct: 63 YGVCQELRKES---DVPIIMLTALSDVSDRITGLELGADDYIVKPFSPKELEARIRSVLR 119 Query: 911 R 913 R Sbjct: 120 R 120
>P23620:PHOB_PSEAE Phosphate regulon transcriptional regulatory protein phoB -| Pseudomonas aeruginosa Length = 229 Score = 57.4 bits (137), Expect = 3e-07 Identities = 34/120 (28%), Positives = 58/120 (48%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGI 733 +L+V+++ R ++ L GYE + AEN A + D + DL+L + +P SGI Sbjct: 6 ILIVDDEAPIREMIAVALEMAGYECLEAENTQQAHAVIVD--RKPDLILLDWMLPGTSGI 63 Query: 734 GLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 913 L ++ + IP+IM++ + L GA D++ KP EL + + RR Sbjct: 64 ELARRLKRDELTVDIPIIMLTAKGEEDNKIQGLEVGADDYITKPFSPRELVARLKAVLRR 123
>Q57QC3:PHOP_SALCH Virulence transcriptional regulatory protein phoP - Salmonella| choleraesuis Length = 224 Score = 57.0 bits (136), Expect = 4e-07 Identities = 33/122 (27%), Positives = 66/122 (54%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 +RVL+VE++ RH ++ L+ G++V + E+ +A YL ++ D+ + ++ +P Sbjct: 2 MRVLVVEDNALLRHHLKVQLQDSGHQVDATEDAREADYYLN--EHLPDIAIVDLGLPDED 59 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIW 907 G+ L+ + S I +PV++++ + + LS GA D++ KP E+ Q + Sbjct: 60 GLSLIRRWRSSDI--SLPVLVLTAREGWQDKVEVLSSGADDYVTKPFHIEEVMARMQALM 117 Query: 908 RR 913 RR Sbjct: 118 RR 119
>P45189:PHOB_HAEIN Phosphate regulon transcriptional regulatory protein phoB -| Haemophilus influenzae Length = 231 Score = 57.0 bits (136), Expect = 4e-07 Identities = 33/123 (26%), Positives = 59/123 (47%) Frame = +2 Query: 545 TLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCL 724 T ++L+VE++ R ++ L + Y+VI A + A + ++ L+L + +P Sbjct: 2 TRKILIVEDECAIREMIALFLSQKYYDVIEASDFKTA---INKIKENPKLILLDWMLPGR 58 Query: 725 SGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHI 904 SGI + I IP+IM++ + CL+ GA D++ KP L + + Sbjct: 59 SGIQFIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAV 118 Query: 905 WRR 913 WRR Sbjct: 119 WRR 121
>Q45994:CTRA_CAUCR Cell cycle transcriptional regulator ctrA - Caulobacter crescentus| (Caulobacter vibrioides) Length = 231 Score = 57.0 bits (136), Expect = 4e-07 Identities = 33/115 (28%), Positives = 62/115 (53%), Gaps = 3/115 (2%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVIS---AENGLDAWQYLEDVQNRIDLVLTEVAMP 718 +RVLL+E+D T + +L+ G+ V + E G+D + + DL+L ++ +P Sbjct: 1 MRVLLIEDDSATAQTIELMLKSEGFNVYTTDLGEEGVDLGKIYD-----YDLILLDLNLP 55 Query: 719 CLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 +SGI +L + I P++++S + + T K + GA D++ KP K+E+ Sbjct: 56 DMSGIDVLRTLRVAKI--NTPIMILSGSSEIDTKVKTFAGGADDYMTKPFHKDEM 108
>Q9SK53:COL3_ARATH Zinc finger protein CONSTANS-LIKE 3 - Arabidopsis thaliana (Mouse-ear| cress) Length = 294 Score = 57.0 bits (136), Expect = 4e-07 Identities = 24/53 (45%), Positives = 37/53 (69%) Frame = +2 Query: 2405 SQREAAVNKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQSGQEDEAG 2563 ++REA V ++R+KRK R F K +RY SRK AE RPR++G+F +++ + G Sbjct: 227 AEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDSRENDG 279
>O78428:YCF27_GUITH Probable transcriptional regulator ycf27 - Guillardia theta| (Cryptomonas phi) Length = 254 Score = 56.6 bits (135), Expect = 5e-07 Identities = 35/121 (28%), Positives = 63/121 (52%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 +VL+V+++ R ++ L GY V++A +G +A Q D+V+ ++ MP L G Sbjct: 16 KVLIVDDEASIRKILETRLSMIGYFVVTASDGEEALNLFH--QEMPDVVILDIMMPKLDG 73 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWR 910 G+ +I S +P+IM++ ++ L GA D++VKP EL+ + + R Sbjct: 74 YGVCQEIRKDS---DVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRAVLR 130 Query: 911 R 913 R Sbjct: 131 R 131
>P48259:YCF27_CYAPA Probable transcriptional regulator ycf27 - Cyanophora paradoxa| Length = 239 Score = 56.2 bits (134), Expect = 7e-07 Identities = 35/127 (27%), Positives = 66/127 (51%) Frame = +2 Query: 533 LPVKTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVA 712 + + ++L+V+++ R ++ L GYEV++A +G +A + +LV+ +V Sbjct: 1 MEINKKKILVVDDEISIRRILETRLSMIGYEVVTAADGEEALTIFQ--LEHPNLVVLDVM 58 Query: 713 MPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTL 892 MP L G G+ ++ S IP+IM++ ++ L GA D++VKP EL+ Sbjct: 59 MPKLDGYGVCQELRKES---DIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEAR 115 Query: 893 WQHIWRR 913 + + RR Sbjct: 116 IRSLLRR 122
>Q39057:CONS_ARATH Zinc finger protein CONSTANS - Arabidopsis thaliana (Mouse-ear cress)| Length = 373 Score = 56.2 bits (134), Expect = 7e-07 Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 2/64 (3%) Frame = +2 Query: 2378 TDLVCQNQLS--QREAAVNKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQSGQE 2551 + ++ QLS REA V ++R+KRK R F K +RY SRK AE RPRV G+F ++ + Sbjct: 293 SQMITVTQLSPMDREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKREIEA 352 Query: 2552 DEAG 2563 +E G Sbjct: 353 EEQG 356
>Q96502:COL2_ARATH Zinc finger protein CONSTANS-LIKE 2 - Arabidopsis thaliana (Mouse-ear| cress) Length = 347 Score = 56.2 bits (134), Expect = 7e-07 Identities = 28/61 (45%), Positives = 40/61 (65%) Frame = +2 Query: 2378 TDLVCQNQLSQREAAVNKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQSGQEDE 2557 T +V Q +REA V ++R+K+K R F K +RY SRK AE RPR++G+F ++ E E Sbjct: 267 TQVVQQLTPMEREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKRIETEAE 326 Query: 2558 A 2560 A Sbjct: 327 A 327
>Q1XDC9:YCF27_PORYE Probable transcriptional regulator ycf27 - Porphyra yezoensis| Length = 243 Score = 55.8 bits (133), Expect = 9e-07 Identities = 37/121 (30%), Positives = 63/121 (52%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 ++L+V+++ R ++ L GYEVI+A NG +A L + LV+ +V MP L G Sbjct: 7 KILVVDDEASIRRILETRLTIIGYEVITASNGEEA--LLVFRKEYPSLVVLDVMMPKLDG 64 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWR 910 G+ ++ S +P+IM++ + L GA D++VKP EL+ + + R Sbjct: 65 YGVCQELRKES---DVPIIMLTALGEVCDRITGLEIGADDYVVKPFSPKELEARIRSVLR 121 Query: 911 R 913 R Sbjct: 122 R 122
>Q9M9B3:COL8_ARATH Putative zinc finger protein CONSTANS-LIKE 8 - Arabidopsis thaliana| (Mouse-ear cress) Length = 313 Score = 55.8 bits (133), Expect = 9e-07 Identities = 26/46 (56%), Positives = 37/46 (80%) Frame = +2 Query: 2405 SQREAAVNKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQS 2542 S+REA V ++R KRK R F KK+RY+ RK A++RPR++G+FVR+S Sbjct: 263 SEREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRRS 308
>Q8LG76:COL6_ARATH Zinc finger protein CONSTANS-LIKE 6 - Arabidopsis thaliana (Mouse-ear| cress) Length = 406 Score = 55.8 bits (133), Expect = 9e-07 Identities = 24/44 (54%), Positives = 37/44 (84%) Frame = +2 Query: 2411 REAAVNKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQS 2542 REA V+++R+KR+ R F KK+RY+ RK AE+RPR++G+FV++S Sbjct: 357 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRS 400
>Q9FHH8:COL5_ARATH Zinc finger protein CONSTANS-LIKE 5 - Arabidopsis thaliana (Mouse-ear| cress) Length = 355 Score = 55.8 bits (133), Expect = 9e-07 Identities = 24/49 (48%), Positives = 36/49 (73%) Frame = +2 Query: 2411 REAAVNKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQSGQEDE 2557 REA V ++R+KRK R F K +RY SRK AE RPR++G+F +++ E++ Sbjct: 285 REARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTETEND 333
>P51358:YCF27_PORPU Probable transcriptional regulator ycf27 - Porphyra purpurea| Length = 243 Score = 55.5 bits (132), Expect = 1e-06 Identities = 36/121 (29%), Positives = 62/121 (51%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 ++L+V+++ R ++ L GYEVI+A NG +A + LV+ +V MP L G Sbjct: 7 KILVVDDEASIRRILETRLTIIGYEVITASNGEEALIIFR--KEYPSLVVLDVMMPKLDG 64 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWR 910 G+ ++ S +P+IM++ + L GA D++VKP EL+ + + R Sbjct: 65 YGVCQELRKES---DVPIIMLTALGEVCDRITGLEIGADDYVVKPFSPKELEARIRSVLR 121 Query: 911 R 913 R Sbjct: 122 R 122
>Q940T9:COL4_ARATH Zinc finger protein CONSTANS-LIKE 4 - Arabidopsis thaliana (Mouse-ear| cress) Length = 362 Score = 55.5 bits (132), Expect = 1e-06 Identities = 23/46 (50%), Positives = 35/46 (76%) Frame = +2 Query: 2405 SQREAAVNKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQS 2542 ++REA V ++R+KRK R F K +RY SRK AE RPR++G+F +++ Sbjct: 293 AEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRT 338
>Q8D0P1:CHEY_YERPE Chemotaxis protein cheY - Yersinia pestis| Length = 129 Score = 55.5 bits (132), Expect = 1e-06 Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 1/125 (0%) Frame = +2 Query: 542 KTLRVLLVENDDCTRHVVRALLRKCGYE-VISAENGLDAWQYLEDVQNRIDLVLTEVAMP 718 K LR L+V++ R +VR LL++ G+ V AE+G+DA L D V+++ MP Sbjct: 4 KNLRFLVVDDFSTMRRIVRNLLKELGFHNVEEAEDGVDALNKLR--AGGFDFVVSDWNMP 61 Query: 719 CLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQ 898 + G+ LL I + +PV+M++ + GA ++VKP L+ Sbjct: 62 NMDGLDLLKTIRTDGALATLPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLN 121 Query: 899 HIWRR 913 I+ + Sbjct: 122 KIFEK 126
>P0AFU4:YFHA_ECOLI Uncharacterized protein yfhA - Escherichia coli| Length = 444 Score = 55.1 bits (131), Expect = 2e-06 Identities = 32/114 (28%), Positives = 63/114 (55%) Frame = +2 Query: 542 KTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPC 721 K +LLV++D ++ L GY V++AE+G + + L + ++DLV++++ M Sbjct: 4 KPAHLLLVDDDPGLLKLLGLRLTSEGYSVVTAESGAEGLRVLN--REKVDLVISDLRMDE 61 Query: 722 LSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 + G+ L ++I + G+PVI+++ + S+ +G FL KP+ K+ L Sbjct: 62 MDGMQLFAEI--QKVQPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVDKDAL 113
>P0AFU5:YFHA_ECO57 Uncharacterized protein yfhA - Escherichia coli O157:H7| Length = 444 Score = 55.1 bits (131), Expect = 2e-06 Identities = 32/114 (28%), Positives = 63/114 (55%) Frame = +2 Query: 542 KTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPC 721 K +LLV++D ++ L GY V++AE+G + + L + ++DLV++++ M Sbjct: 4 KPAHLLLVDDDPGLLKLLGLRLTSEGYSVVTAESGAEGLRVLN--REKVDLVISDLRMDE 61 Query: 722 LSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 + G+ L ++I + G+PVI+++ + S+ +G FL KP+ K+ L Sbjct: 62 MDGMQLFAEI--QKVQPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVDKDAL 113
>P51343:YCF29_PORPU Probable transcriptional regulator ycf29 - Porphyra purpurea| Length = 209 Score = 55.1 bits (131), Expect = 2e-06 Identities = 34/117 (29%), Positives = 58/117 (49%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGI 733 ++LVEND ++ L G+ V A NGL+A+Q + + DL+++++ MP + G Sbjct: 5 LMLVENDTVLSKAIQEYLIDQGFNVDIALNGLEAFQLAN--KYKFDLIISDIIMPIIDGY 62 Query: 734 GLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHI 904 LL K+ IPVI ++ K + G +L KP EL +L +++ Sbjct: 63 ELLEKLRKIDKLAKIPVIFLTAKGMTKDRIKGYNMGCYGYLSKPFDPEELVSLIKNL 119
>Q44929:GTCR_ANEMI Response regulator gtcR - Aneurinibacillus migulanus| Length = 242 Score = 55.1 bits (131), Expect = 2e-06 Identities = 31/109 (28%), Positives = 57/109 (52%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGI 733 +L+ +++ +++ L + Y +I A +G AW Y+ Q+ +DL + ++ MP L G Sbjct: 5 ILIADDEPEIIELLKLFLERESYRIIEAYDGEQAWNYIR--QHPVDLAIIDIMMPALDGF 62 Query: 734 GLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNE 880 L+ ++T+ +PVI++S + S L GA DF+ KP E Sbjct: 63 QLIKRLTNE---YKLPVIILSAKNRDSDKILGLGLGADDFISKPFNPLE 108
>Q9C9A9:COL7_ARATH Zinc finger protein CONSTANS-LIKE 7 - Arabidopsis thaliana (Mouse-ear| cress) Length = 392 Score = 55.1 bits (131), Expect = 2e-06 Identities = 23/45 (51%), Positives = 37/45 (82%) Frame = +2 Query: 2408 QREAAVNKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQS 2542 +REA V ++++KR+ R F KK+RY+ RK AEQRPR++G+FV+++ Sbjct: 344 EREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKRT 388
>Q93P00:CHEY_YEREN Chemotaxis protein cheY - Yersinia enterocolitica| Length = 129 Score = 55.1 bits (131), Expect = 2e-06 Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 1/125 (0%) Frame = +2 Query: 542 KTLRVLLVENDDCTRHVVRALLRKCGYE-VISAENGLDAWQYLEDVQNRIDLVLTEVAMP 718 K LR L+V++ R +VR LL++ G+ V AE+G+DA L D V+++ MP Sbjct: 4 KNLRFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLRT--GGFDFVVSDWNMP 61 Query: 719 CLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQ 898 + G+ LL I + +PV+M++ + GA ++VKP L+ Sbjct: 62 NMDGLDLLKTIRADGALGTLPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLN 121 Query: 899 HIWRR 913 I+ + Sbjct: 122 KIFEK 126
>Q8RWD0:COL16_ARATH Zinc finger protein CONSTANS-LIKE 16 - Arabidopsis thaliana| (Mouse-ear cress) Length = 417 Score = 54.7 bits (130), Expect = 2e-06 Identities = 23/44 (52%), Positives = 37/44 (84%) Frame = +2 Query: 2411 REAAVNKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQS 2542 REA V+++R+KR+ R F KK+RY+ RK AE+RPR++G+FV+++ Sbjct: 361 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRA 404
>Q7A0U4:SRRA_STAAW Transcriptional regulatory protein srrA - Staphylococcus aureus| (strain MW2) Length = 241 Score = 54.3 bits (129), Expect = 3e-06 Identities = 30/120 (25%), Positives = 64/120 (53%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGI 733 +L+V+++D R +++ L + +E+ A NG +A++ ++N +L ++ +P + GI Sbjct: 5 ILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELA--MENNYACILLDLMLPEMDGI 62 Query: 734 GLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 913 + +K+ H K P+IM++ + + GA D++VKP E+ + + RR Sbjct: 63 QVATKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119
>Q9L524:SRRA_STAAU Transcriptional regulatory protein srrA - Staphylococcus aureus| Length = 241 Score = 54.3 bits (129), Expect = 3e-06 Identities = 30/120 (25%), Positives = 64/120 (53%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGI 733 +L+V+++D R +++ L + +E+ A NG +A++ ++N +L ++ +P + GI Sbjct: 5 ILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELA--MENNYACILLDLMLPEMDGI 62 Query: 734 GLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 913 + +K+ H K P+IM++ + + GA D++VKP E+ + + RR Sbjct: 63 QVATKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119
>Q6G972:SRRA_STAAS Transcriptional regulatory protein srrA - Staphylococcus aureus| (strain MSSA476) Length = 241 Score = 54.3 bits (129), Expect = 3e-06 Identities = 30/120 (25%), Positives = 64/120 (53%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGI 733 +L+V+++D R +++ L + +E+ A NG +A++ ++N +L ++ +P + GI Sbjct: 5 ILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELA--MENNYACILLDLMLPEMDGI 62 Query: 734 GLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 913 + +K+ H K P+IM++ + + GA D++VKP E+ + + RR Sbjct: 63 QVATKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119
>Q6GGK6:SRRA_STAAR Transcriptional regulatory protein srrA - Staphylococcus aureus| (strain MRSA252) Length = 241 Score = 54.3 bits (129), Expect = 3e-06 Identities = 30/120 (25%), Positives = 64/120 (53%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGI 733 +L+V+++D R +++ L + +E+ A NG +A++ ++N +L ++ +P + GI Sbjct: 5 ILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELA--MENNYACILLDLMLPEMDGI 62 Query: 734 GLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 913 + +K+ H K P+IM++ + + GA D++VKP E+ + + RR Sbjct: 63 QVATKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119
>Q7A5H6:SRRA_STAAN Transcriptional regulatory protein srrA - Staphylococcus aureus| (strain N315) Length = 241 Score = 54.3 bits (129), Expect = 3e-06 Identities = 30/120 (25%), Positives = 64/120 (53%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGI 733 +L+V+++D R +++ L + +E+ A NG +A++ ++N +L ++ +P + GI Sbjct: 5 ILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELA--MENNYACILLDLMLPEMDGI 62 Query: 734 GLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 913 + +K+ H K P+IM++ + + GA D++VKP E+ + + RR Sbjct: 63 QVATKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119
>Q7A2R6:SRRA_STAAM Transcriptional regulatory protein srrA - Staphylococcus aureus| (strain Mu50 / ATCC 700699) Length = 241 Score = 54.3 bits (129), Expect = 3e-06 Identities = 30/120 (25%), Positives = 64/120 (53%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGI 733 +L+V+++D R +++ L + +E+ A NG +A++ ++N +L ++ +P + GI Sbjct: 5 ILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELA--MENNYACILLDLMLPEMDGI 62 Query: 734 GLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 913 + +K+ H K P+IM++ + + GA D++VKP E+ + + RR Sbjct: 63 QVATKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119
>Q5HFT0:SRRA_STAAC Transcriptional regulatory protein srrA - Staphylococcus aureus| (strain COL) Length = 241 Score = 54.3 bits (129), Expect = 3e-06 Identities = 30/120 (25%), Positives = 64/120 (53%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGI 733 +L+V+++D R +++ L + +E+ A NG +A++ ++N +L ++ +P + GI Sbjct: 5 ILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELA--MENNYACILLDLMLPEMDGI 62 Query: 734 GLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 913 + +K+ H K P+IM++ + + GA D++VKP E+ + + RR Sbjct: 63 QVATKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119
>Q2FY79:SRRA_STAA8 Transcriptional regulatory protein srrA - Staphylococcus aureus| (strain NCTC 8325) Length = 241 Score = 54.3 bits (129), Expect = 3e-06 Identities = 30/120 (25%), Positives = 64/120 (53%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGI 733 +L+V+++D R +++ L + +E+ A NG +A++ ++N +L ++ +P + GI Sbjct: 5 ILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELA--MENNYACILLDLMLPEMDGI 62 Query: 734 GLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 913 + +K+ H K P+IM++ + + GA D++VKP E+ + + RR Sbjct: 63 QVATKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119
>P0A5Z6:PRRA_MYCTU Transcriptional regulatory protein prrA - Mycobacterium| tuberculosis Length = 233 Score = 54.3 bits (129), Expect = 3e-06 Identities = 37/125 (29%), Positives = 66/125 (52%) Frame = +2 Query: 539 VKTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMP 718 V + RVL+V++D + LR G+EV +A +G +A + +NR D ++ ++ MP Sbjct: 5 VTSPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALR--SATENRPDAIVLDINMP 62 Query: 719 CLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQ 898 L G+ +++ + ++ +PV ++S S+ L GA D+LVKP EL + Sbjct: 63 VLDGVSVVTAL--RAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVK 120 Query: 899 HIWRR 913 + RR Sbjct: 121 ALLRR 125
>P0A5Z7:PRRA_MYCBO Transcriptional regulatory protein prrA - Mycobacterium bovis| Length = 233 Score = 54.3 bits (129), Expect = 3e-06 Identities = 37/125 (29%), Positives = 66/125 (52%) Frame = +2 Query: 539 VKTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMP 718 V + RVL+V++D + LR G+EV +A +G +A + +NR D ++ ++ MP Sbjct: 5 VTSPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALR--SATENRPDAIVLDINMP 62 Query: 719 CLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQ 898 L G+ +++ + ++ +PV ++S S+ L GA D+LVKP EL + Sbjct: 63 VLDGVSVVTAL--RAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVK 120 Query: 899 HIWRR 913 + RR Sbjct: 121 ALLRR 125
>P0A2D5:CHEY_SALTY Chemotaxis protein cheY - Salmonella typhimurium| Length = 129 Score = 54.3 bits (129), Expect = 3e-06 Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 1/125 (0%) Frame = +2 Query: 542 KTLRVLLVENDDCTRHVVRALLRKCGYE-VISAENGLDAWQYLEDVQNRIDLVLTEVAMP 718 K L+ L+V++ R +VR LL++ G+ V AE+G+DA L+ ++++ MP Sbjct: 4 KELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQ--AGGFGFIISDWNMP 61 Query: 719 CLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQ 898 + G+ LL I + S +PV+M++ + GA ++VKP L+ Sbjct: 62 NMDGLELLKTIRADSAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLN 121 Query: 899 HIWRR 913 I+ + Sbjct: 122 KIFEK 126
>P0A2D6:CHEY_SALTI Chemotaxis protein cheY - Salmonella typhi| Length = 129 Score = 54.3 bits (129), Expect = 3e-06 Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 1/125 (0%) Frame = +2 Query: 542 KTLRVLLVENDDCTRHVVRALLRKCGYE-VISAENGLDAWQYLEDVQNRIDLVLTEVAMP 718 K L+ L+V++ R +VR LL++ G+ V AE+G+DA L+ ++++ MP Sbjct: 4 KELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQ--AGGFGFIISDWNMP 61 Query: 719 CLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQ 898 + G+ LL I + S +PV+M++ + GA ++VKP L+ Sbjct: 62 NMDGLELLKTIRADSAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLN 121 Query: 899 HIWRR 913 I+ + Sbjct: 122 KIFEK 126
>P0A4H5:CHEY_LISMO Chemotaxis protein cheY - Listeria monocytogenes| Length = 119 Score = 53.9 bits (128), Expect = 3e-06 Identities = 33/113 (29%), Positives = 65/113 (57%), Gaps = 1/113 (0%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVIS-AENGLDAWQYLEDVQNRIDLVLTEVAMPCL 724 L++L+V++ R +++ +++ +EV++ AENGL+A + ++V+ D+V ++ MP + Sbjct: 2 LKLLIVDDAMFMRTMIKNIVKDSDFEVVAEAENGLEAVKKYDEVKP--DIVTLDITMPEM 59 Query: 725 SGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 G+ L++I + VIM S V + KGA DF+VKP + + + Sbjct: 60 DGLEALAQIMAKD--PSAKVIMCSAMGQQGMVVDAIKKGAKDFIVKPFQADRV 110
>P0A4H6:CHEY_LISIN Chemotaxis protein cheY - Listeria innocua| Length = 119 Score = 53.9 bits (128), Expect = 3e-06 Identities = 33/113 (29%), Positives = 65/113 (57%), Gaps = 1/113 (0%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVIS-AENGLDAWQYLEDVQNRIDLVLTEVAMPCL 724 L++L+V++ R +++ +++ +EV++ AENGL+A + ++V+ D+V ++ MP + Sbjct: 2 LKLLIVDDAMFMRTMIKNIVKDSDFEVVAEAENGLEAVKKYDEVKP--DIVTLDITMPEM 59 Query: 725 SGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 G+ L++I + VIM S V + KGA DF+VKP + + + Sbjct: 60 DGLEALAQIMAKD--PSAKVIMCSAMGQQGMVVDAIKKGAKDFIVKPFQADRV 110
>Q8FGP6:CHEY_ECOL6 Chemotaxis protein cheY - Escherichia coli O6| Length = 129 Score = 53.9 bits (128), Expect = 3e-06 Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 1/125 (0%) Frame = +2 Query: 542 KTLRVLLVENDDCTRHVVRALLRKCGYE-VISAENGLDAWQYLEDVQNRIDLVLTEVAMP 718 K L+ L+V++ R +VR LL++ G+ V AE+GLDA L+ V+++ MP Sbjct: 4 KELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGLDALNKLQ--AGGYGFVISDWNMP 61 Query: 719 CLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQ 898 + G+ LL I + +PV+M++ + GA ++VKP L+ Sbjct: 62 NMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLN 121 Query: 899 HIWRR 913 I+ + Sbjct: 122 KIFEK 126
>P28257:YCF27_GALSU Probable transcriptional regulator ycf27 - Galdieria sulphuraria| (Red alga) Length = 255 Score = 53.5 bits (127), Expect = 5e-06 Identities = 34/121 (28%), Positives = 62/121 (51%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 ++L+ +++ R ++ L GYEV++A +G A + +LV+ +V MP + G Sbjct: 9 KILIADDESSIRRILETRLSIIGYEVLTAPDGRSALFLFH--KEHPNLVVLDVMMPKIDG 66 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWR 910 G+ +I S IP+IM++ ++ L GA D++VKP EL+ + + R Sbjct: 67 YGVCQEIRKES---DIPIIMLTALGDVTDRITGLELGADDYVVKPFSPKELEARIRCVLR 123 Query: 911 R 913 R Sbjct: 124 R 124
>P0AEV3:HNR_SHIFL Protein hnr - Shigella flexneri| Length = 337 Score = 53.5 bits (127), Expect = 5e-06 Identities = 31/112 (27%), Positives = 62/112 (55%) Frame = +2 Query: 536 PVKTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAM 715 P+ ++L+VE++ R ++ + G + A +G+DA + L DL++ ++AM Sbjct: 4 PLVGKQILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELLGGFTP--DLMICDIAM 61 Query: 716 PCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIR 871 P ++G+ LL I + PV+++S ++M+ + K L G D L+KP++ Sbjct: 62 PRMNGLKLLEHIRNRG--DQTPVLVISATENMADIAKALRLGVEDVLLKPVK 111
>P0AEV1:HNR_ECOLI Protein hnr - Escherichia coli| Length = 337 Score = 53.5 bits (127), Expect = 5e-06 Identities = 31/112 (27%), Positives = 62/112 (55%) Frame = +2 Query: 536 PVKTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAM 715 P+ ++L+VE++ R ++ + G + A +G+DA + L DL++ ++AM Sbjct: 4 PLVGKQILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELLGGFTP--DLMICDIAM 61 Query: 716 PCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIR 871 P ++G+ LL I + PV+++S ++M+ + K L G D L+KP++ Sbjct: 62 PRMNGLKLLEHIRNRG--DQTPVLVISATENMADIAKALRLGVEDVLLKPVK 111
>P0AEV2:HNR_ECO57 Protein hnr - Escherichia coli O157:H7| Length = 337 Score = 53.5 bits (127), Expect = 5e-06 Identities = 31/112 (27%), Positives = 62/112 (55%) Frame = +2 Query: 536 PVKTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAM 715 P+ ++L+VE++ R ++ + G + A +G+DA + L DL++ ++AM Sbjct: 4 PLVGKQILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELLGGFTP--DLMICDIAM 61 Query: 716 PCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIR 871 P ++G+ LL I + PV+++S ++M+ + K L G D L+KP++ Sbjct: 62 PRMNGLKLLEHIRNRG--DQTPVLVISATENMADIAKALRLGVEDVLLKPVK 111
>Q8H1G0:GAT25_ARATH GATA transcription factor 25 - Arabidopsis thaliana (Mouse-ear cress)| Length = 302 Score = 53.1 bits (126), Expect = 6e-06 Identities = 26/56 (46%), Positives = 35/56 (62%) Frame = +2 Query: 2402 LSQREAAVNKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQSGQEDEAGQA 2569 + QR A++ +FR+KRK RNF KK+RY RK +A + R +GQF DEA A Sbjct: 144 IPQRLASLVRFREKRKGRNFDKKIRYTVRKEVALRMQRNKGQFTSAKSNNDEAASA 199
>P39486:DCTR_BACME Probable C4-dicarboxylate response regulator dctR - Bacillus| megaterium Length = 228 Score = 53.1 bits (126), Expect = 6e-06 Identities = 37/117 (31%), Positives = 64/117 (54%), Gaps = 2/117 (1%) Frame = +2 Query: 542 KTLRVLLVENDDCTRHVVRALLRKC-GYEVISA-ENGLDAWQYLEDVQNRIDLVLTEVAM 715 K VLL+E+D + V R + + G+ VI+A NGL+ Q ++ Q++ DL + ++ M Sbjct: 4 KAWTVLLIEDDPMVQEVNRQFIEQVEGFTVIAAASNGLEGVQLIK--QHQPDLTIIDMYM 61 Query: 716 PCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 886 P G+ L +I ++ VI ++ + TV K L GAVD+++KP + +K Sbjct: 62 PSQDGLTTLQQIRANGY--KTDVIAVTAASDIETVRKVLQYGAVDYIMKPFKFERMK 116
>P44918:ARCA_HAEIN Aerobic respiration control protein arcA homolog - Haemophilus| influenzae Length = 236 Score = 53.1 bits (126), Expect = 6e-06 Identities = 32/113 (28%), Positives = 60/113 (53%) Frame = +2 Query: 545 TLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCL 724 T ++L+VE++ TR+ ++ + GY+V AENG++ L + I+LV+ ++ +P Sbjct: 3 TPKILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHIL--ANHNINLVVMDINLPGK 60 Query: 725 SGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 +G+ L ++ +P+I ++ D+ L GA D+L KP EL Sbjct: 61 NGLLLARELREE---LSLPLIFLTGRDNEVDKILGLEIGADDYLTKPFNPREL 110
>Q87GU5:LUXQ_VIBPA Autoinducer 2 sensor kinase/phosphatase luxQ - Vibrio| parahaemolyticus Length = 858 Score = 52.8 bits (125), Expect = 8e-06 Identities = 34/114 (29%), Positives = 64/114 (56%) Frame = +2 Query: 542 KTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPC 721 ++L+VLLVE++ +++A K +V A++GL+A ++L+D + DL+L + +P Sbjct: 732 ESLKVLLVEDNHTNAFILKAFCTKYKMQVDWAKDGLEAMEFLKD--HSYDLILMDNQLPH 789 Query: 722 LSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 L GI +I ++ G P+ + + + T + GA L+KPI++N L Sbjct: 790 LGGIETTKEI-RQNLKLGTPIYACTADTAQETSDAFMEAGANYVLLKPIKENAL 842
>P0AE69:CHEY_SHIFL Chemotaxis protein cheY - Shigella flexneri| Length = 129 Score = 52.8 bits (125), Expect = 8e-06 Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 1/125 (0%) Frame = +2 Query: 542 KTLRVLLVENDDCTRHVVRALLRKCGYE-VISAENGLDAWQYLEDVQNRIDLVLTEVAMP 718 K L+ L+V++ R +VR LL++ G+ V AE+G+DA L+ V+++ MP Sbjct: 4 KELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQ--AGGYGFVISDWNMP 61 Query: 719 CLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQ 898 + G+ LL I + +PV+M++ + GA ++VKP L+ Sbjct: 62 NMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLN 121 Query: 899 HIWRR 913 I+ + Sbjct: 122 KIFEK 126
>P0AE67:CHEY_ECOLI Chemotaxis protein cheY - Escherichia coli| Length = 129 Score = 52.8 bits (125), Expect = 8e-06 Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 1/125 (0%) Frame = +2 Query: 542 KTLRVLLVENDDCTRHVVRALLRKCGYE-VISAENGLDAWQYLEDVQNRIDLVLTEVAMP 718 K L+ L+V++ R +VR LL++ G+ V AE+G+DA L+ V+++ MP Sbjct: 4 KELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQ--AGGYGFVISDWNMP 61 Query: 719 CLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQ 898 + G+ LL I + +PV+M++ + GA ++VKP L+ Sbjct: 62 NMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLN 121 Query: 899 HIWRR 913 I+ + Sbjct: 122 KIFEK 126
>P0AE68:CHEY_ECO57 Chemotaxis protein cheY - Escherichia coli O157:H7| Length = 129 Score = 52.8 bits (125), Expect = 8e-06 Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 1/125 (0%) Frame = +2 Query: 542 KTLRVLLVENDDCTRHVVRALLRKCGYE-VISAENGLDAWQYLEDVQNRIDLVLTEVAMP 718 K L+ L+V++ R +VR LL++ G+ V AE+G+DA L+ V+++ MP Sbjct: 4 KELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQ--AGGYGFVISDWNMP 61 Query: 719 CLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQ 898 + G+ LL I + +PV+M++ + GA ++VKP L+ Sbjct: 62 NMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLN 121 Query: 899 HIWRR 913 I+ + Sbjct: 122 KIFEK 126
>P24072:CHEY_BACSU Chemotaxis protein cheY homolog - Bacillus subtilis| Length = 120 Score = 52.8 bits (125), Expect = 8e-06 Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 1/112 (0%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVIS-AENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 R+L+V++ R +++ +L K G+EV++ AENG A + ++ + DLV ++ MP + Sbjct: 4 RILIVDDAAFMRMMIKDILVKNGFEVVAEAENGAQAVEKYKE--HSPDLVTMDITMPEMD 61 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 GI L +I I +IM S S V + GA DF+VKP + + + Sbjct: 62 GITALKEIKQ--IDAQARIIMCSAMGQQSMVIDAIQAGAKDFIVKPFQADRV 111
>P38889:SKN7_YEAST Transcription factor SKN7 - Saccharomyces cerevisiae (Baker's| yeast) Length = 622 Score = 52.4 bits (124), Expect = 1e-05 Identities = 39/117 (33%), Positives = 55/117 (47%) Frame = +2 Query: 542 KTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPC 721 K VLLVE+D + + LRK G V +GL A LE + R DLVL ++ MP Sbjct: 375 KGFHVLLVEDDAVSIQLCSKFLRKYGCTVQVVSDGLSAISTLE--KYRYDLVLMDIVMPN 432 Query: 722 LSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTL 892 L G S + S P+I M+ N + L G D L KP +++L ++ Sbjct: 433 LDGATATSIVRSFD--NETPIIAMTGNIMNQDLITYLQHGMNDILAKPFTRDDLHSI 487
>Q9ZHD3:SILR_SALTY Probable transcriptional regulatory protein silR - Salmonella| typhimurium Length = 228 Score = 52.4 bits (124), Expect = 1e-05 Identities = 35/122 (28%), Positives = 65/122 (53%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 +++L+VE+D T + L + G+ V A+NGL + + DLV+ ++ +P ++ Sbjct: 1 MKILIVEDDIKTGEYLSKGLTEAGFVVDHADNGLTGYHLAMTAE--YDLVILDIMLPDVN 58 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIW 907 G ++ + S KG+PV++++ ++ K L GA D+LVKP EL + + Sbjct: 59 GWDIIRMLRSAG--KGMPVLLLTALGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLL 116 Query: 908 RR 913 RR Sbjct: 117 RR 118
>P0A4I0:DLTR_STRA5 Transcriptional regulatory protein dltR - Streptococcus agalactiae| serotype V Length = 224 Score = 52.4 bits (124), Expect = 1e-05 Identities = 32/112 (28%), Positives = 57/112 (50%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 +R+L+VE++ ++ALL GY V A +G D +Y+ + DLVL ++ +P S Sbjct: 1 MRLLVVEDEKSIAEAIQALLADKGYSVDLAFDGDDGLEYI--LTGLYDLVLLDIMLPKRS 58 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 G+ +L ++ + P+I ++ L GA D++ KP +EL Sbjct: 59 GLSVLKRVREAGL--ETPIIFLTAKSQTYDKVNGLDLGADDYITKPFEADEL 108
>P0A4H9:DLTR_STRA3 Transcriptional regulatory protein dltR - Streptococcus agalactiae| serotype III Length = 224 Score = 52.4 bits (124), Expect = 1e-05 Identities = 32/112 (28%), Positives = 57/112 (50%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 +R+L+VE++ ++ALL GY V A +G D +Y+ + DLVL ++ +P S Sbjct: 1 MRLLVVEDEKSIAEAIQALLADKGYSVDLAFDGDDGLEYI--LTGLYDLVLLDIMLPKRS 58 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 G+ +L ++ + P+I ++ L GA D++ KP +EL Sbjct: 59 GLSVLKRVREAGL--ETPIIFLTAKSQTYDKVNGLDLGADDYITKPFEADEL 108
>Q51455:CHEY_PSEAE Chemotaxis protein cheY - Pseudomonas aeruginosa| Length = 124 Score = 52.4 bits (124), Expect = 1e-05 Identities = 31/123 (25%), Positives = 60/123 (48%), Gaps = 1/123 (0%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGY-EVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCL 724 +++L+V++ R +++ LLR G+ A++G A L D ++T+ MP + Sbjct: 1 MKILIVDDFSTMRRIIKNLLRDLGFTNTAEADDGTTALPMLHS--GNFDFLVTDWNMPGM 58 Query: 725 SGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHI 904 +GI LL + + K +PV+M++ + + G ++VKP LK + I Sbjct: 59 TGIDLLRAVRADERLKHLPVLMVTAEAKRDQIIEAAQAGVNGYVVKPFTAQVLKEKIEKI 118 Query: 905 WRR 913 + R Sbjct: 119 FER 121
>Q6AJV3:CHEB_DESPS Chemotaxis response regulator protein-glutamate methylesterase -| Desulfotalea psychrophila Length = 364 Score = 52.4 bits (124), Expect = 1e-05 Identities = 38/114 (33%), Positives = 58/114 (50%), Gaps = 2/114 (1%) Frame = +2 Query: 539 VKTLRVLLVENDDCTRHVVRALLRKC-GYEVIS-AENGLDAWQYLEDVQNRIDLVLTEVA 712 +K LRVL+V++ R +V LLR+ G EVI A NG A + ++ DL+ ++ Sbjct: 1 MKNLRVLVVDDTILYRKIVSDLLREIPGIEVIGVAHNGKIALDKIR--LSKPDLITLDIE 58 Query: 713 MPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRK 874 MP ++GI LL + G ++ +D K L GA DF++KP K Sbjct: 59 MPVMNGIELLEHLKDIPDAPGAVMLSTLTSDGSRMTMKALELGAFDFILKPQEK 112
>Q6LA43:APRR2_ARATH Two-component response regulator-like APRR2 - Arabidopsis thaliana| (Mouse-ear cress) Length = 535 Score = 52.4 bits (124), Expect = 1e-05 Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 6/135 (4%) Frame = +2 Query: 518 RWEKFLPVKTLRVLLVEN------DDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQ 679 +WE F K L+VLL+ N D + R+ L Y V + + +A + Sbjct: 10 KWENF--PKGLKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEALSAVVKNP 67 Query: 680 NRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLV 859 + + EV M S + + P IM+S + ++T KC++ GAV+FL Sbjct: 68 ESFHIAIVEVNMSAESESFKFLEAAKDVL----PTIMISTDHCITTTMKCIALGAVEFLQ 123 Query: 860 KPIRKNELKTLWQHI 904 KP+ +LK +WQH+ Sbjct: 124 KPLSPEKLKNIWQHV 138
>Q56128:RCSC_SALTI Sensor protein rcsC - Salmonella typhi| Length = 948 Score = 52.0 bits (123), Expect = 1e-05 Identities = 33/113 (29%), Positives = 58/113 (51%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 + +L+V++ R ++ L GY+ +A +G+DA L +N ID+VL++V MP + Sbjct: 825 MMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLS--KNAIDIVLSDVNMPNMD 882 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 886 G L +I + +PV+ ++ N +CL G L KP+ + LK Sbjct: 883 GYRLTQRIRQLGLT--LPVVGVTANALAEEKQRCLESGMDSCLSKPVTLDALK 933
>Q01473:RCAC_FREDI Protein rcaC - Fremyella diplosiphon (Calothrix PCC 7601)| Length = 651 Score = 52.0 bits (123), Expect = 1e-05 Identities = 33/122 (27%), Positives = 62/122 (50%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 +++LLVE+DD V+ L Y V ++G W Y + DL++ ++ +P L Sbjct: 1 MKILLVEDDDVLIKVLTKNLTTHHYIVDVVKDGEMGWTYGSTFE--YDLIILDIMLPNLD 58 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIW 907 GI L + + +P+++++ D+++ + L GA D++VKP EL + + Sbjct: 59 GISLCKRFRAQGYT--VPILLLTAQDNITAKVQGLDAGADDYVVKPFDPIELIARIRALL 116 Query: 908 RR 913 RR Sbjct: 117 RR 118 Score = 43.5 bits (101), Expect = 0.005 Identities = 27/111 (24%), Positives = 56/111 (50%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 +V+++++D + LL+ G++V + + W L+ V D ++ +V MP ++G Sbjct: 527 KVMILDDDQDWLRTLPTLLKPWGFKVTTLADPQQFWTVLQAVTP--DALVLDVNMPQING 584 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 L + S + +PV+ +S +T + + G D+L KP++ EL Sbjct: 585 FELCQLLRSDPHWQRLPVLFLSVLTDPTTQNQAFAVGGDDYLCKPVKGVEL 635
>P45607:PHOB_SHIFL Phosphate regulon transcriptional regulatory protein phoB -| Shigella flexneri Length = 229 Score = 52.0 bits (123), Expect = 1e-05 Identities = 34/121 (28%), Positives = 61/121 (50%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 R+L+VE++ R +V +L + G++ + AE+ A L + DL+L + +P SG Sbjct: 4 RILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWP--DLILLDWMLPGGSG 61 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWR 910 I + + S+ + IPV+M++ + L GA D++ KP EL + + R Sbjct: 62 IQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMR 121 Query: 911 R 913 R Sbjct: 122 R 122
>P45606:PHOB_SHIDY Phosphate regulon transcriptional regulatory protein phoB -| Shigella dysenteriae Length = 229 Score = 52.0 bits (123), Expect = 1e-05 Identities = 34/121 (28%), Positives = 61/121 (50%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 R+L+VE++ R +V +L + G++ + AE+ A L + DL+L + +P SG Sbjct: 4 RILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWP--DLILLDWMLPGGSG 61 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWR 910 I + + S+ + IPV+M++ + L GA D++ KP EL + + R Sbjct: 62 IQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMR 121 Query: 911 R 913 R Sbjct: 122 R 122
>P0AFJ5:PHOB_ECOLI Phosphate regulon transcriptional regulatory protein phoB -| Escherichia coli Length = 229 Score = 52.0 bits (123), Expect = 1e-05 Identities = 34/121 (28%), Positives = 61/121 (50%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 R+L+VE++ R +V +L + G++ + AE+ A L + DL+L + +P SG Sbjct: 4 RILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWP--DLILLDWMLPGGSG 61 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWR 910 I + + S+ + IPV+M++ + L GA D++ KP EL + + R Sbjct: 62 IQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMR 121 Query: 911 R 913 R Sbjct: 122 R 122
>P0AFJ6:PHOB_ECO57 Phosphate regulon transcriptional regulatory protein phoB -| Escherichia coli O157:H7 Length = 229 Score = 52.0 bits (123), Expect = 1e-05 Identities = 34/121 (28%), Positives = 61/121 (50%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 R+L+VE++ R +V +L + G++ + AE+ A L + DL+L + +P SG Sbjct: 4 RILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWP--DLILLDWMLPGGSG 61 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWR 910 I + + S+ + IPV+M++ + L GA D++ KP EL + + R Sbjct: 62 IQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMR 121 Query: 911 R 913 R Sbjct: 122 R 122
>P0AE90:CPXR_SHIFL Transcriptional regulatory protein cpxR - Shigella flexneri| Length = 232 Score = 52.0 bits (123), Expect = 1e-05 Identities = 41/121 (33%), Positives = 59/121 (48%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 ++LLV++D +++ LL G+ VI A +G A L+D IDL+L +V MP +G Sbjct: 3 KILLVDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLLDD---SIDLLLLDVMMPKKNG 59 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWR 910 I L + PVIM++ S L GA D+L KP EL + I R Sbjct: 60 IDTLKALRQ---THQTPVIMLTARGSELDRVLGLELGADDYLPKPFNDRELVARIRAILR 116 Query: 911 R 913 R Sbjct: 117 R 117
>P44895:CPXR_HAEIN Transcriptional regulatory protein cpxR homolog - Haemophilus| influenzae Length = 227 Score = 52.0 bits (123), Expect = 1e-05 Identities = 42/121 (34%), Positives = 61/121 (50%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 ++LLV++D ++ LL G++V +A NGL+A Q L + LVL +V MP L+G Sbjct: 3 KLLLVDDDIELTELLSTLLELEGFDVETANNGLEALQKLNE---SYKLVLLDVMMPKLNG 59 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWR 910 I L +I S +PV+M++ L GA D L KP EL + I R Sbjct: 60 IETLKEIRKVS---NVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILR 116 Query: 911 R 913 R Sbjct: 117 R 117
>P0AE88:CPXR_ECOLI Transcriptional regulatory protein cpxR - Escherichia coli| Length = 232 Score = 52.0 bits (123), Expect = 1e-05 Identities = 41/121 (33%), Positives = 59/121 (48%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 ++LLV++D +++ LL G+ VI A +G A L+D IDL+L +V MP +G Sbjct: 3 KILLVDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLLDD---SIDLLLLDVMMPKKNG 59 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWR 910 I L + PVIM++ S L GA D+L KP EL + I R Sbjct: 60 IDTLKALRQ---THQTPVIMLTARGSELDRVLGLELGADDYLPKPFNDRELVARIRAILR 116 Query: 911 R 913 R Sbjct: 117 R 117
>P0AE89:CPXR_ECO57 Transcriptional regulatory protein cpxR - Escherichia coli O157:H7| Length = 232 Score = 52.0 bits (123), Expect = 1e-05 Identities = 41/121 (33%), Positives = 59/121 (48%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 ++LLV++D +++ LL G+ VI A +G A L+D IDL+L +V MP +G Sbjct: 3 KILLVDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLLDD---SIDLLLLDVMMPKKNG 59 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWR 910 I L + PVIM++ S L GA D+L KP EL + I R Sbjct: 60 IDTLKALRQ---THQTPVIMLTARGSELDRVLGLELGADDYLPKPFNDRELVARIRAILR 116 Query: 911 R 913 R Sbjct: 117 R 117
>Q04942:AFSQ1_STRCO Transcriptional regulatory protein afsQ1 - Streptomyces coelicolor| Length = 225 Score = 52.0 bits (123), Expect = 1e-05 Identities = 33/120 (27%), Positives = 62/120 (51%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGI 733 +LL+E+DD R + L + G+ V +A +G D + L + R DL++ +V +P + G Sbjct: 4 LLLIEDDDAIRTALELSLTRQGHRVATAASGEDGLKLLR--EQRPDLIVLDVMLPGIDGF 61 Query: 734 GLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 913 + +I +P+I+++ + V L GA D++VKP++ L + + RR Sbjct: 62 EVCRRIRR---TDQLPIILLTARNDDIDVVVGLESGADDYVVKPVQGRVLDARIRAVLRR 118
>P0C0F6:RPFC_XANCP Sensory/regulatory protein rpfC - Xanthomonas campestris pv.| campestris Length = 677 Score = 51.6 bits (122), Expect = 2e-05 Identities = 32/115 (27%), Positives = 63/115 (54%), Gaps = 5/115 (4%) Frame = +2 Query: 539 VKTLRVLLVENDDCTRHVVRALLRKCGYEVI---SAENGLDAWQYLEDVQNRIDLVLTEV 709 V+++R+L+ ++ + R V++ LL K G++V+ AE LDA + D V+ ++ Sbjct: 410 VRSMRMLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAM-----AEEDYDAVIVDL 464 Query: 710 AMPCLSGIGLLS--KITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPI 868 MP ++G+ +L ++ S + PV+++S + + + C GA FL KP+ Sbjct: 465 HMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARAFLAKPV 519
>P0C0F7:RPFC_XANC8 Sensory/regulatory protein rpfC - Xanthomonas campestris pv.| campestris (strain 8004) Length = 677 Score = 51.6 bits (122), Expect = 2e-05 Identities = 32/115 (27%), Positives = 63/115 (54%), Gaps = 5/115 (4%) Frame = +2 Query: 539 VKTLRVLLVENDDCTRHVVRALLRKCGYEVI---SAENGLDAWQYLEDVQNRIDLVLTEV 709 V+++R+L+ ++ + R V++ LL K G++V+ AE LDA + D V+ ++ Sbjct: 410 VRSMRMLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAM-----AEEDYDAVIVDL 464 Query: 710 AMPCLSGIGLLS--KITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPI 868 MP ++G+ +L ++ S + PV+++S + + + C GA FL KP+ Sbjct: 465 HMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARAFLAKPV 519
>P58662:RCSC_SALTY Sensor protein rcsC - Salmonella typhimurium| Length = 948 Score = 51.6 bits (122), Expect = 2e-05 Identities = 33/113 (29%), Positives = 58/113 (51%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 + +L+V++ R ++ L GY+ +A +G+DA L +N ID+VL++V MP + Sbjct: 825 MMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLS--KNAIDIVLSDVNMPNMD 882 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 886 G L +I + +PV+ ++ N +CL G L KP+ + LK Sbjct: 883 GYRLTQRIRQLGLT--LPVVGVTANALAEEKQRCLESGMDSCLSKPVTLDVLK 933
>P14376:RCSC_ECOLI Sensor kinase protein rcsC - Escherichia coli| Length = 949 Score = 51.6 bits (122), Expect = 2e-05 Identities = 33/113 (29%), Positives = 58/113 (51%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 + +L+V++ R ++ L GY+ +A +G+DA L +N ID+VL++V MP + Sbjct: 825 MMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLS--KNHIDIVLSDVNMPNMD 882 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 886 G L +I + +PVI ++ N +CL G L KP+ + +K Sbjct: 883 GYRLTQRIRQLGLT--LPVIGVTANALAEEKQRCLESGMDSCLSKPVTLDVIK 933
>Q50136:PRRA_MYCLE Transcriptional regulatory protein prrA - Mycobacterium leprae| Length = 233 Score = 51.6 bits (122), Expect = 2e-05 Identities = 36/125 (28%), Positives = 65/125 (52%) Frame = +2 Query: 539 VKTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMP 718 V + RVL+V++D + LR G+EV +A +G +A + + R D ++ ++ MP Sbjct: 5 VSSPRVLVVDDDSDVLASLERGLRLSGFEVSTAIDGAEALR--NATETRPDAIVLDINMP 62 Query: 719 CLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQ 898 L G+ +++ + ++ +PV ++S S+ L GA D+LVKP EL + Sbjct: 63 VLDGVSVVTAL--RAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVK 120 Query: 899 HIWRR 913 + RR Sbjct: 121 ALLRR 125
>P54302:LUXQ_VIBHA Autoinducer 2 sensor kinase/phosphatase luxQ - Vibrio harveyi| Length = 859 Score = 51.6 bits (122), Expect = 2e-05 Identities = 34/114 (29%), Positives = 63/114 (55%) Frame = +2 Query: 542 KTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPC 721 ++L+VLLVE++ +++A +K +V A++GLDA + L D DL+L + +P Sbjct: 733 ESLKVLLVEDNHTNAFILQAFCKKYKMQVDWAKDGLDAMELLSD--TTYDLILMDNQLPH 790 Query: 722 LSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 L GI +I ++ G P+ + + + T ++ GA ++KPI++N L Sbjct: 791 LGGIETTHEI-RQNLRLGTPIYACTADTAKETSDAFMAAGANYVMLKPIKENAL 843
>Q9C9F6:APRR6_ARATH Putative two-component response regulator-like APRR6 - Arabidopsis| thaliana (Mouse-ear cress) Length = 663 Score = 51.6 bits (122), Expect = 2e-05 Identities = 28/122 (22%), Positives = 62/122 (50%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 + +LL+++D + + ++L++ V+S + A +E + I L++ + MP + Sbjct: 13 ISILLIDHDTASIASLTSMLQQFSKRVMSVDVASKALSMIEKQKKEIGLIIANIEMPHID 72 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIW 907 L+ + + K IP+I+++ L+K A L KPI +++K +WQH++ Sbjct: 73 SHSFLNAL----LLKDIPLILINPEIKTKEPSDLLTKRACFSLDKPISNDDIKNMWQHVF 128 Query: 908 RR 913 + Sbjct: 129 SK 130
>P13792:PHOP_BACSU Alkaline phosphatase synthesis transcriptional regulatory protein| phoP - Bacillus subtilis Length = 240 Score = 51.2 bits (121), Expect = 2e-05 Identities = 31/121 (25%), Positives = 64/121 (52%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 ++L+V++++ +++ L + GY+VI+A +G +A + E + DL++ +V +P L G Sbjct: 4 KILVVDDEESIVTLLQYNLERSGYDVITASDGEEALKKAET--EKPDLIVLDVMLPKLDG 61 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWR 910 I + ++ + P++M++ D L GA D++ KP E+ + I R Sbjct: 62 IEVCKQLRQQKLM--FPILMLTAKDEEFDKVLGLELGADDYMTKPFSPREVNARVKAILR 119 Query: 911 R 913 R Sbjct: 120 R 120
>Q9LUA9:COL10_ARATH Zinc finger protein CONSTANS-LIKE 10 - Arabidopsis thaliana| (Mouse-ear cress) Length = 373 Score = 51.2 bits (121), Expect = 2e-05 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +2 Query: 2381 DLVCQNQLSQREAAVNKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQSGQED 2554 D++ + + R AV ++++K+K R F K+VRY SRK A+ R RV+G+FV+ D Sbjct: 306 DIIASSHATTRNNAVMRYKEKKKARKFDKRVRYVSRKERADVRRRVKGRFVKSGEAYD 363
>Q9FAD7:CHEY_ENTCL Chemotaxis protein cheY - Enterobacter cloacae| Length = 129 Score = 51.2 bits (121), Expect = 2e-05 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 1/109 (0%) Frame = +2 Query: 542 KTLRVLLVENDDCTRHVVRALLRKCGYE-VISAENGLDAWQYLEDVQNRIDLVLTEVAMP 718 K L+ L+V++ R +VR LL++ G+ V AE+G+DA L+ V+++ MP Sbjct: 4 KELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQ--AGGFGFVISDWNMP 61 Query: 719 CLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKP 865 + G+ LL I + + +PV+M++ + GA ++VKP Sbjct: 62 NMDGLELLKTIRADAGMASMPVLMVTAEAKKENIIAAAQAGASGYVVKP 110
>P37478:YYCF_BACSU Transcriptional regulatory protein yycF - Bacillus subtilis| Length = 235 Score = 50.8 bits (120), Expect = 3e-05 Identities = 32/111 (28%), Positives = 60/111 (54%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 ++L+V+++ ++ LRK GYEV A +G +A + +E++Q DL+L ++ +P G Sbjct: 4 KILVVDDEKPIADILEFNLRKEGYEVHCAHDGNEAVEMVEELQP--DLILLDIMLPNKDG 61 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 + + ++ +P+IM++ DS L GA D++ KP EL Sbjct: 62 VEVCREVRKK---YDMPIIMLTAKDSEIDKVIGLEIGADDYVTKPFSTREL 109
>Q47744:VANR_ENTFA Regulatory protein vanRB - Enterococcus faecalis (Streptococcus| faecalis) Length = 220 Score = 50.8 bits (120), Expect = 3e-05 Identities = 33/123 (26%), Positives = 63/123 (51%) Frame = +2 Query: 545 TLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCL 724 ++R+LLVE+DD + VRA L + YEV + +G +A + + +N LV+ ++ +P + Sbjct: 2 SIRILLVEDDDHICNTVRAFLAEARYEVDACTDGNEA--HTKFYENTYQLVILDIMLPGM 59 Query: 725 SGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHI 904 +G LL + + + P++MM+ + A D++ KP + L + + Sbjct: 60 NGHELLREFRAQN---DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEAL 116 Query: 905 WRR 913 RR Sbjct: 117 LRR 119
>P0A5Z4:MTRA_MYCTU DNA-binding response regulator mtrA - Mycobacterium tuberculosis| Length = 225 Score = 50.8 bits (120), Expect = 3e-05 Identities = 30/111 (27%), Positives = 60/111 (54%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 R+L+V++D ++ +LR G++ +G A + ++ R DLVL ++ +P ++G Sbjct: 4 RILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVREL--RPDLVLLDLMLPGMNG 61 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 I + + + S G+P++M++ V L GA D+++KP + EL Sbjct: 62 IDVCRVLRADS---GVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKEL 109
>Q93CB8:MTRA_MYCPA DNA-binding response regulator mtrA - Mycobacterium| paratuberculosis Length = 225 Score = 50.8 bits (120), Expect = 3e-05 Identities = 30/111 (27%), Positives = 60/111 (54%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 R+L+V++D ++ +LR G++ +G A + ++ R DLVL ++ +P ++G Sbjct: 4 RILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVREL--RPDLVLLDLMLPGMNG 61 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 I + + + S G+P++M++ V L GA D+++KP + EL Sbjct: 62 IDVCRVLRADS---GVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKEL 109
>Q9CCJ2:MTRA_MYCLE DNA-binding response regulator mtrA - Mycobacterium leprae| Length = 225 Score = 50.8 bits (120), Expect = 3e-05 Identities = 30/111 (27%), Positives = 60/111 (54%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 R+L+V++D ++ +LR G++ +G A + ++ R DLVL ++ +P ++G Sbjct: 4 RILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVREL--RPDLVLLDLMLPGMNG 61 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 I + + + S G+P++M++ V L GA D+++KP + EL Sbjct: 62 IDVCRVLRADS---GVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKEL 109
>P0A5Z5:MTRA_MYCBO DNA-binding response regulator mtrA - Mycobacterium bovis| Length = 225 Score = 50.8 bits (120), Expect = 3e-05 Identities = 30/111 (27%), Positives = 60/111 (54%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 R+L+V++D ++ +LR G++ +G A + ++ R DLVL ++ +P ++G Sbjct: 4 RILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVREL--RPDLVLLDLMLPGMNG 61 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 I + + + S G+P++M++ V L GA D+++KP + EL Sbjct: 62 IDVCRVLRADS---GVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKEL 109
>Q56312:CHEY_THEMA Chemotaxis protein cheY - Thermotoga maritima| Length = 120 Score = 50.8 bits (120), Expect = 3e-05 Identities = 32/112 (28%), Positives = 62/112 (55%), Gaps = 1/112 (0%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVIS-AENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 RVL+V++ R +++ ++ K GYEV A NG +A + ++++ D+V ++ MP ++ Sbjct: 4 RVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYKELKP--DIVTMDITMPEMN 61 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 GI + +I I +I+ S + V + + GA DF+VKP + + + Sbjct: 62 GIDAIKEIMK--IDPNAKIIVCSAMGQQAMVIEAIKAGAKDFIVKPFQPSRV 111
>Q9F868:REGX3_MYCS2 Sensory transduction protein regX3 - Mycobacterium smegmatis| (strain ATCC 700084 / mc(2)155) Length = 228 Score = 50.4 bits (119), Expect = 4e-05 Identities = 36/120 (30%), Positives = 61/120 (50%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGI 733 VL+VE+++ + LLRK G+E +G A E ++ D+VL ++ +P +SG Sbjct: 4 VLIVEDEESLADPLAFLLRKEGFEATVVGDGPSALAEFE--RSGADIVLLDLMLPGMSGT 61 Query: 734 GLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 913 + ++ + S +PVIM++ DS L GA D++ KP EL + + RR Sbjct: 62 DVCKQLRARS---SVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRR 118
>P39663:SPHR_SYNP7 Alkaline phosphatase synthesis transcriptional regulatory protein| sphR - Synechococcus sp. (strain PCC 7942) (Anacystis nidulans R2) Length = 257 Score = 50.1 bits (118), Expect = 5e-05 Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 7/128 (5%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLED-------VQNRIDLVLTEV 709 R+L+VE++ R +V +L++ G+ V A +G A Y V DLV+ ++ Sbjct: 25 RILVVEDEAVIRDMVALVLQQEGFTVDVAADGRTALNYFRSDSPEAGSVTENPDLVVLDL 84 Query: 710 AMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKT 889 +P ++G+ + + +P++M+S D+ + L GA D+L KP EL Sbjct: 85 MLPAVNGLDFCRLLRRQGVT--VPILMLSAKDTETDRVVGLEIGADDYLTKPFGTRELVA 142 Query: 890 LWQHIWRR 913 + + RR Sbjct: 143 RCRALLRR 150
>P0ACZ8:CUSR_ECOLI Transcriptional regulatory protein cusR - Escherichia coli| Length = 227 Score = 50.1 bits (118), Expect = 5e-05 Identities = 32/122 (26%), Positives = 67/122 (54%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 +++L+VE++ T + L + G+ V A+NGL+ + + DL++ ++ +P ++ Sbjct: 1 MKLLIVEDEKKTGEYLTKGLTEAGFVVDLADNGLNGYHLA--MTGDYDLIILDIMLPDVN 58 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIW 907 G ++ + S + KG+P+++++ ++ K L GA D+LVKP EL + + Sbjct: 59 GWDIVRMLRSAN--KGMPILLLTALGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLL 116 Query: 908 RR 913 RR Sbjct: 117 RR 118
>P0ACZ9:CUSR_ECOL6 Transcriptional regulatory protein cusR - Escherichia coli O6| Length = 227 Score = 50.1 bits (118), Expect = 5e-05 Identities = 32/122 (26%), Positives = 67/122 (54%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 +++L+VE++ T + L + G+ V A+NGL+ + + DL++ ++ +P ++ Sbjct: 1 MKLLIVEDEKKTGEYLTKGLTEAGFVVDLADNGLNGYHLA--MTGDYDLIILDIMLPDVN 58 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIW 907 G ++ + S + KG+P+++++ ++ K L GA D+LVKP EL + + Sbjct: 59 GWDIVRMLRSAN--KGMPILLLTALGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLL 116 Query: 908 RR 913 RR Sbjct: 117 RR 118
>P0AD00:CUSR_ECO57 Transcriptional regulatory protein cusR - Escherichia coli O157:H7| Length = 227 Score = 50.1 bits (118), Expect = 5e-05 Identities = 32/122 (26%), Positives = 67/122 (54%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 +++L+VE++ T + L + G+ V A+NGL+ + + DL++ ++ +P ++ Sbjct: 1 MKLLIVEDEKKTGEYLTKGLTEAGFVVDLADNGLNGYHLA--MTGDYDLIILDIMLPDVN 58 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIW 907 G ++ + S + KG+P+++++ ++ K L GA D+LVKP EL + + Sbjct: 59 GWDIVRMLRSAN--KGMPILLLTALGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLL 116 Query: 908 RR 913 RR Sbjct: 117 RR 118
>Q5V0B3:CHEB_HALMA Chemotaxis response regulator protein-glutamate methylesterase -| Haloarcula marismortui (Halobacterium marismortui) Length = 369 Score = 50.1 bits (118), Expect = 5e-05 Identities = 33/109 (30%), Positives = 61/109 (55%), Gaps = 3/109 (2%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVIS-AENGLDAWQYLEDVQNRIDLVLTEVAMPCL 724 +R ++ ++ R V+ +L G +V++ A +G +A + +++R D+V +V MP + Sbjct: 5 VRAVVADDSHFMRSVISDILSDGGIDVVAQARDGEEAVSAV--IEHRPDVVTMDVEMPVM 62 Query: 725 SGIGLLSKITSHSICKGIPVIMMSKN--DSMSTVFKCLSKGAVDFLVKP 865 +GI +I + S PV+M+S + ++ F+ L KGAVDF KP Sbjct: 63 NGIEATERIMAES---PTPVLMLSAHTDENADVTFEALDKGAVDFFTKP 108
>P45605:PHOB_KLEPN Phosphate regulon transcriptional regulatory protein phoB -| Klebsiella pneumoniae Length = 229 Score = 49.7 bits (117), Expect = 7e-05 Identities = 32/121 (26%), Positives = 61/121 (50%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 R+L+VE++ R +V +L + G++ + AE+ A L + DL+L + +P SG Sbjct: 4 RILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWP--DLILLDWMLPGGSG 61 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWR 910 + + + ++ + IPV+M++ + L GA D++ KP EL + + R Sbjct: 62 LQFIKLLKREAMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMR 121 Query: 911 R 913 R Sbjct: 122 R 122
>Q9RC52:CITT_BACHD Transcriptional regulatory protein citT - Bacillus halodurans| Length = 230 Score = 49.7 bits (117), Expect = 7e-05 Identities = 33/116 (28%), Positives = 61/116 (52%), Gaps = 2/116 (1%) Frame = +2 Query: 542 KTLRVLLVENDDCTRHVVRALLRKCGY-EVISA-ENGLDAWQYLEDVQNRIDLVLTEVAM 715 K +VL++E+D + ++ Y VIS G +A YL + +DL+L +V + Sbjct: 3 KLYKVLIIEDDFRVAQIQEQMVNDHPYFHVISTCRTGGEALDYLSEKAAALDLILLDVYI 62 Query: 716 PCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 P + G+ LL I + + ++M++ + TV + L G +D+L+KP++K L Sbjct: 63 PDVKGLELLWAIREKF--RDVDIMMVTAAKEVDTVQEALRGGIIDYLLKPVQKEVL 116
>Q8GXL7:GAT27_ARATH GATA transcription factor 27 - Arabidopsis thaliana (Mouse-ear cress)| Length = 297 Score = 49.3 bits (116), Expect = 9e-05 Identities = 23/52 (44%), Positives = 33/52 (63%) Frame = +2 Query: 2408 QREAAVNKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQSGQEDEAG 2563 QR A++ +FR+KRK RNF K +RY RK +A + R +GQF D++G Sbjct: 142 QRLASLLRFREKRKGRNFDKTIRYTVRKEVALRMQRKKGQFTSAKSSNDDSG 193
>P76340:YEDW_ECOLI Probable transcriptional regulatory protein yedW - Escherichia coli| Length = 223 Score = 48.9 bits (115), Expect = 1e-04 Identities = 32/112 (28%), Positives = 61/112 (54%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 +++LL+E++ T+ V L + GY + + +G D YL +++ L++ ++ +P + Sbjct: 1 MKILLIEDNQRTQEWVTQGLSEAGYVIDAVSDGRDGL-YLA-LKDDYALIILDIMLPGMD 58 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 G +L + + K PVI ++ DS+ + L GA D+LVKP +EL Sbjct: 59 GWQILQTLRT---AKQTPVICLTARDSVDDRVRGLDSGANDYLVKPFSFSEL 107
>P39928:SLN1_YEAST Osmosensing histidine protein kinase SLN1 - Saccharomyces cerevisiae| (Baker's yeast) Length = 1220 Score = 48.9 bits (115), Expect = 1e-04 Identities = 30/120 (25%), Positives = 69/120 (57%), Gaps = 4/120 (3%) Frame = +2 Query: 545 TLRVLLVENDDCTRHVVRALLRKCGYEVIS-AENGLDAWQYLEDVQNR---IDLVLTEVA 712 ++++L+VE++ + V++ +L G E I A +G +A+ ++++ ++ +++ +V Sbjct: 1087 SVKILVVEDNHVNQEVIKRMLNLEGIENIELACDGQEAFDKVKELTSKGENYNMIFMDVQ 1146 Query: 713 MPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTL 892 MP + G+ L +K+ + P++ ++ S + +CL G FL KPI++ +LKT+ Sbjct: 1147 MPKVDGL-LSTKMIRRDLGYTSPIVALTAFADDSNIKECLESGMNGFLSKPIKRPKLKTI 1205
>Q87MX7:LUXO_VIBPA Regulatory protein luxO - Vibrio parahaemolyticus| Length = 453 Score = 48.9 bits (115), Expect = 1e-04 Identities = 31/111 (27%), Positives = 60/111 (54%), Gaps = 2/111 (1%) Frame = +2 Query: 560 LVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRI-DLVLTEVAMPCLSGIG 736 +VE+ + R+ L G ++ G DA +E + +RI DL+L ++ +P ++G+ Sbjct: 1 MVEDTASVAALYRSYLTPLGIDINIVGTGRDA---IESLNHRIPDLILLDLRLPDMTGMD 57 Query: 737 LLSKIT-SHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 886 +L + SH +P+I M+ + S+ T + + G+ DFL+KP + L+ Sbjct: 58 VLHAVKKSHP---DVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLR 105
>P54299:LUXO_VIBHA Luminescence regulatory protein luxO - Vibrio harveyi| Length = 453 Score = 48.9 bits (115), Expect = 1e-04 Identities = 31/111 (27%), Positives = 60/111 (54%), Gaps = 2/111 (1%) Frame = +2 Query: 560 LVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRI-DLVLTEVAMPCLSGIG 736 +VE+ + R+ L G ++ G DA +E + +RI DL+L ++ +P ++G+ Sbjct: 1 MVEDTASVAALYRSYLTPLGIDINIVGTGRDA---IESLNHRIPDLILLDLRLPDMTGMD 57 Query: 737 LLSKIT-SHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 886 +L + SH +P+I M+ + S+ T + + G+ DFL+KP + L+ Sbjct: 58 VLHAVKKSHP---DVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLR 105
>Q02540:COPR_PSESM Transcriptional activator protein copR - Pseudomonas syringae pv.| tomato Length = 227 Score = 48.9 bits (115), Expect = 1e-04 Identities = 33/122 (27%), Positives = 63/122 (51%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 +++L+ E++ T ++ LR+ G+ V G DA + + DL++ +V MP L Sbjct: 1 MKLLVAEDEPKTGIYLQQGLREAGFNVDRVVTGTDAVD--QALNEAYDLLILDVMMPGLD 58 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIW 907 G ++ ++ + + +PV+ ++ D + K L GA D+LVKP +EL + + Sbjct: 59 GWEVIRRLRTAG--QPVPVLFLTARDGVDDRVKGLELGADDYLVKPFALSELLARVRTLL 116 Query: 908 RR 913 RR Sbjct: 117 RR 118
>P96126:CHEY_TREPA Chemotaxis protein cheY - Treponema pallidum| Length = 144 Score = 48.9 bits (115), Expect = 1e-04 Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 1/112 (0%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVI-SAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 RVL+V++ + +L GYEV +A +G+D + + + +DLV ++ MP + Sbjct: 26 RVLVVDDSMFVSKQIGQILTSEGYEVADTAVDGVDGVEKYKAMSPGVDLVTMDITMPKMD 85 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 GI L KI K V+++S V K L GA +++VKP+ + ++ Sbjct: 86 GITALEKILEFD--KNAKVVIISALGKEELVKKALLLGAKNYIVKPLDRKKV 135
>Q9A5I5:PLED_CAUCR Response regulator pleD - Caulobacter crescentus (Caulobacter| vibrioides) Length = 454 Score = 48.5 bits (114), Expect = 1e-04 Identities = 31/106 (29%), Positives = 54/106 (50%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 R+L+V++ + ++ A L YEV +A +G A ++ D++L +V MP + G Sbjct: 4 RILVVDDIEANVRLLEAKLTAEYYEVSTAMDGPTALAMA--ARDLPDIILLDVMMPGMDG 61 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPI 868 + K+ + IPV++++ D + L GA DFL KPI Sbjct: 62 FTVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESGASDFLTKPI 107 Score = 34.7 bits (78), Expect = 2.2 Identities = 19/66 (28%), Positives = 29/66 (43%) Frame = +2 Query: 686 IDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKP 865 +DLV+ A G+ + + S + +PV+ M D + K L G D L +P Sbjct: 196 VDLVIVNAAAKNFDGLRFTAALRSEERTRQLPVLAMVDPDDRGRMVKALEIGVNDILSRP 255 Query: 866 IRKNEL 883 I EL Sbjct: 256 IDPQEL 261
>P0AFB8:NTRC_ECOLI Nitrogen regulation protein NR(I) - Escherichia coli| Length = 469 Score = 48.5 bits (114), Expect = 1e-04 Identities = 31/113 (27%), Positives = 54/113 (47%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGI 733 V +V++D R V+ L G + ENG + + L D++L+++ MP + G+ Sbjct: 6 VWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEAL--ASKTPDVLLSDIRMPGMDGL 63 Query: 734 GLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTL 892 LL +I +PVI+M+ + + +GA D+L KP +E L Sbjct: 64 ALLKQIKQRHPM--LPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVAL 114
>P0AFB9:NTRC_ECO57 Nitrogen regulation protein NR(I) - Escherichia coli O157:H7| Length = 469 Score = 48.5 bits (114), Expect = 1e-04 Identities = 31/113 (27%), Positives = 54/113 (47%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGI 733 V +V++D R V+ L G + ENG + + L D++L+++ MP + G+ Sbjct: 6 VWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEAL--ASKTPDVLLSDIRMPGMDGL 63 Query: 734 GLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTL 892 LL +I +PVI+M+ + + +GA D+L KP +E L Sbjct: 64 ALLKQIKQRHPM--LPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVAL 114
>Q7MM78:LUXO_VIBVY Regulatory protein luxO - Vibrio vulnificus (strain YJ016)| Length = 453 Score = 48.5 bits (114), Expect = 1e-04 Identities = 30/111 (27%), Positives = 61/111 (54%), Gaps = 2/111 (1%) Frame = +2 Query: 560 LVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRI-DLVLTEVAMPCLSGIG 736 +VE+ + R+ L G ++ G DA ++ +++RI DL+L ++ +P ++G+ Sbjct: 1 MVEDTASVAALYRSYLMPLGIDINIVGTGRDA---IDSLKHRIPDLILLDLRLPDMTGMD 57 Query: 737 LLSKI-TSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 886 +L + SH +P+I M+ + S+ T + + G+ DFL+KP + L+ Sbjct: 58 VLHAVKASHP---DVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLR 105
>Q8CWJ5:LUXO_VIBVU Regulatory protein luxO - Vibrio vulnificus| Length = 453 Score = 48.5 bits (114), Expect = 1e-04 Identities = 30/111 (27%), Positives = 61/111 (54%), Gaps = 2/111 (1%) Frame = +2 Query: 560 LVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRI-DLVLTEVAMPCLSGIG 736 +VE+ + R+ L G ++ G DA ++ +++RI DL+L ++ +P ++G+ Sbjct: 1 MVEDTASVAALYRSYLMPLGIDINIVGTGRDA---IDSLKHRIPDLILLDLRLPDMTGMD 57 Query: 737 LLSKI-TSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 886 +L + SH +P+I M+ + S+ T + + G+ DFL+KP + L+ Sbjct: 58 VLHAVKASHP---DVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLR 105
>O23379:COL11_ARATH Putative zinc finger protein CONSTANS-LIKE 11 - Arabidopsis thaliana| (Mouse-ear cress) Length = 330 Score = 48.5 bits (114), Expect = 1e-04 Identities = 23/49 (46%), Positives = 36/49 (73%) Frame = +2 Query: 2411 REAAVNKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQSGQEDE 2557 R+ A +++QK+ +R FGK++RY SRK A+ R RV+G+FV+ SG+ E Sbjct: 276 RDEAKKRYKQKKSKRMFGKQIRYASRKARADTRKRVKGRFVK-SGETFE 323
>P42244:YCBL_BACSU Uncharacterized sensory transduction protein ycbL - Bacillus| subtilis Length = 226 Score = 48.1 bits (113), Expect = 2e-04 Identities = 35/109 (32%), Positives = 54/109 (49%) Frame = +2 Query: 557 LLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIG 736 +LVE+D +V L K G+ ++ A +G + + + Q DLVL ++ +P L+G+ Sbjct: 1 MLVEDDHSISEMVDHYLTKEGFGIVHAFDGEEGIRLFQ--QGSYDLVLLDIMLPKLNGMD 58 Query: 737 LLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 L I S IPV+M+S D L GA D++ KP EL Sbjct: 59 FLKIIREKS---NIPVLMISAKDGDVDKALGLGFGADDYIAKPFSMIEL 104
>Q00934:PILR_PSEAE Type 4 fimbriae expression regulatory protein pilR - Pseudomonas| aeruginosa Length = 445 Score = 48.1 bits (113), Expect = 2e-04 Identities = 33/114 (28%), Positives = 56/114 (49%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 + L+V+++ R ++ L + + SA N +A + L + DL LT++ +P SG Sbjct: 5 KALIVDDEPDIRELLEITLGRMKLDTRSARNVKEARELL--AREPFDLCLTDMRLPDGSG 62 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTL 892 + L+ I PV M++ S+ T + L GA DFL KP+ L+ L Sbjct: 63 LDLVQYIQQRH--PQTPVAMITAYGSLDTAIQALKAGAFDFLTKPVDLGRLREL 114
>Q4UU85:RPFG_XANC8 Response regulator rpfG - Xanthomonas campestris pv. campestris| (strain 8004) Length = 378 Score = 47.8 bits (112), Expect = 3e-04 Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 2/115 (1%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENG--LDAWQYLEDVQNRIDLVLTEVAMPC 721 L +++V++ R ++R ++ E+ + G LDA + E R+DL+L + MP Sbjct: 28 LNIVIVDDQMSARTMLRHVIEDIAPELKVYDFGDPLDALSWCE--AGRVDLLLLDYRMPG 85 Query: 722 LSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 886 + G+ ++ + IP+I+++ L G +DFLVKPIR EL+ Sbjct: 86 MDGLEFARRLRRLPSHRDIPIILITIVGDEPIRQAALEAGVIDFLVKPIRPRELR 140
>P35163:RESD_BACSU Transcriptional regulatory protein resD - Bacillus subtilis| Length = 240 Score = 47.8 bits (112), Expect = 3e-04 Identities = 31/121 (25%), Positives = 60/121 (49%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 ++L+V+++ R ++R L + Y + AENG +A + ++ DL+L ++ MP G Sbjct: 8 KILVVDDEARIRRLLRMYLERENYAIDEAENGDEA--IAKGLEANYDLILLDLMMPGTDG 65 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWR 910 I + +I K P+IM++ + + G D++VKP E+ + + R Sbjct: 66 IEVCRQIREK---KATPIIMLTAKGEEANRVQGFEAGTDDYIVKPFSPREVVLRVKALLR 122 Query: 911 R 913 R Sbjct: 123 R 123
>Q11156:REGX3_MYCTU Sensory transduction protein regX3 - Mycobacterium tuberculosis| Length = 227 Score = 47.8 bits (112), Expect = 3e-04 Identities = 35/120 (29%), Positives = 60/120 (50%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGI 733 VL+VE+++ + LLRK G+E +G A + + D+VL ++ +P +SG Sbjct: 4 VLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFD--RAGADIVLLDLMLPGMSGT 61 Query: 734 GLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 913 + ++ + S +PVIM++ DS L GA D++ KP EL + + RR Sbjct: 62 DVCKQLRARS---SVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRR 118
>O07130:REGX3_MYCBO Sensory transduction protein regX3 - Mycobacterium bovis| Length = 227 Score = 47.8 bits (112), Expect = 3e-04 Identities = 35/120 (29%), Positives = 60/120 (50%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGI 733 VL+VE+++ + LLRK G+E +G A + + D+VL ++ +P +SG Sbjct: 4 VLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFD--RAGADIVLLDLMLPGMSGT 61 Query: 734 GLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 913 + ++ + S +PVIM++ DS L GA D++ KP EL + + RR Sbjct: 62 DVCKQLRARS---SVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRR 118
>P45337:QSEB_HAEIN Transcriptional regulatory protein qseB - Haemophilus influenzae| Length = 221 Score = 47.8 bits (112), Expect = 3e-04 Identities = 33/122 (27%), Positives = 62/122 (50%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 +R+LL+E+D+ + ++ L K G+ V +G L D V+ ++ +P L Sbjct: 1 MRILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAP--YDAVVLDLTLPKLD 58 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIW 907 G+ +L + S+ + +PV++++ D++ K L GA D+L KP E+ Q + Sbjct: 59 GLEVLQQWRSNH--QDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALI 116 Query: 908 RR 913 RR Sbjct: 117 RR 118
>Q44006:CZCR_RALME Transcriptional activator protein czcR - Ralstonia metallidurans| (strain CH34 / ATCC 43123 / DSM 2839) Length = 225 Score = 47.8 bits (112), Expect = 3e-04 Identities = 33/112 (29%), Positives = 57/112 (50%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 +RVL+VE++ T ++ L + G+ V A NG D E+ D+++ +V +P + Sbjct: 1 MRVLVVEDEPRTAEYLQKGLSESGFVVDIANNGGDGLHMAEETD--YDVIILDVMLPGMD 58 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 G ++ I S S PV+ ++ D ++ + GA D+LVKP EL Sbjct: 59 GWTVIKSIRSKS---ETPVLFLTALDDVADRVRGFELGADDYLVKPFAFAEL 107
>O82256:COL13_ARATH Zinc finger protein CONSTANS-LIKE 13 - Arabidopsis thaliana| (Mouse-ear cress) Length = 332 Score = 47.8 bits (112), Expect = 3e-04 Identities = 18/43 (41%), Positives = 33/43 (76%) Frame = +2 Query: 2408 QREAAVNKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVR 2536 +R +A++++++K+K R + K +RY+SRK AE R R+RG+F + Sbjct: 286 ERNSALSRYKEKKKSRRYEKHIRYESRKVRAESRTRIRGRFAK 328
>Q1CWZ9:CHEB5_MYXXD Chemotaxis response regulator protein-glutamate methylesterase 5 -| Myxococcus xanthus (strain DK 1622) Length = 348 Score = 47.8 bits (112), Expect = 3e-04 Identities = 33/111 (29%), Positives = 59/111 (53%), Gaps = 2/111 (1%) Frame = +2 Query: 539 VKTLRVLLVENDDCTRHVVRALLRKC-GYEVIS-AENGLDAWQYLEDVQNRIDLVLTEVA 712 V +RVL+V++ R V+R +L G EV+ A +GLDA + + ++ D++ ++ Sbjct: 4 VSPIRVLVVDDSAFARKVLRQVLSSAEGLEVVGVARDGLDALEKVAELSP--DVLTLDLV 61 Query: 713 MPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKP 865 MP L G+G+L + S + + V++ S + L GAV+ + KP Sbjct: 62 MPGLDGLGVLRALASSAAAPRV-VVVSSAGEESELAVAALQAGAVELVNKP 111
>Q2RRX2:CHEB3_RHORT Chemotaxis response regulator protein-glutamate methylesterase 3 -| Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) Length = 370 Score = 47.8 bits (112), Expect = 3e-04 Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 3/108 (2%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLR-KCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 +VL+V++ R ++ +L G+EV+ A NG++A LE D++ ++ MP + Sbjct: 3 KVLIVDDSALMRRHLKEILEVHGGFEVMVARNGIEALAGLESFDP--DVITLDINMPEMD 60 Query: 728 GIGLLSKITSHSICKGIPVIMMSK--NDSMSTVFKCLSKGAVDFLVKP 865 G+ LS+I + K PV+M+S + L+ GAVDF+ KP Sbjct: 61 GLTCLSRIMA---TKPKPVVMVSSLTETGAEVTLEALALGAVDFIHKP 105
>O05251:MALR_BACSU Transcriptional regulatory protein malR - Bacillus subtilis| Length = 235 Score = 47.4 bits (111), Expect = 3e-04 Identities = 29/115 (25%), Positives = 63/115 (54%), Gaps = 1/115 (0%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKC-GYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCL 724 + VL+VE+D + + L + G+++ + + ++ ++ IDL+L ++ MP Sbjct: 2 INVLIVEDDPMVGELNKRYLSQIDGFQLKGIASSFQSALHILG-EHHIDLILLDIYMPGK 60 Query: 725 SGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKT 889 +G+ LL+++ + + + + VI++S + + K L GAVD+L+KP +T Sbjct: 61 NGLELLTELRAQN--EAVDVIVISAASELDVIKKTLRYGAVDYLIKPFEFERFQT 113
>Q7MD16:LUXQ_VIBVY Autoinducer 2 sensor kinase/phosphatase luxQ - Vibrio vulnificus| (strain YJ016) Length = 857 Score = 47.4 bits (111), Expect = 3e-04 Identities = 33/112 (29%), Positives = 60/112 (53%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 L+VLLVE++ +++A +K V ++G A + L++ + DL+L + +P + Sbjct: 734 LKVLLVEDNHTNAFILKAFCQKYQMSVEWVQDGTQALEKLKE--HAFDLILMDNQLPKMG 791 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 GI +I ++ G P+ + + ST + LS GA +VKPI++ EL Sbjct: 792 GIEATREIRE-TLKLGTPIYACTADAQESTKQEFLSAGANRVIVKPIKEQEL 842
>Q8D5Z6:LUXQ_VIBVU Autoinducer 2 sensor kinase/phosphatase luxQ - Vibrio vulnificus| Length = 857 Score = 47.4 bits (111), Expect = 3e-04 Identities = 33/112 (29%), Positives = 60/112 (53%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 L+VLLVE++ +++A +K V ++G A + L++ + DL+L + +P + Sbjct: 734 LKVLLVEDNHTNAFILKAFCQKYQMSVEWVQDGTQALEKLKE--HAFDLILMDNQLPKMG 791 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 GI +I ++ G P+ + + ST + LS GA +VKPI++ EL Sbjct: 792 GIEATREIRE-TLKLGTPIYACTADAQESTKQEFLSAGANRVIVKPIKEQEL 842
>Q9SSE5:COL9_ARATH Zinc finger protein CONSTANS-LIKE 9 - Arabidopsis thaliana (Mouse-ear| cress) Length = 372 Score = 47.4 bits (111), Expect = 3e-04 Identities = 25/55 (45%), Positives = 36/55 (65%) Frame = +2 Query: 2411 REAAVNKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQSGQEDEAGQAAD 2575 R AV ++++K+K R F K+VRY SRK A+ R RV+G+FV+ AG+A D Sbjct: 315 RNNAVMRYKEKKKARKFDKRVRYASRKARADVRRRVKGRFVK-------AGEAYD 362
>Q9C7E8:COL15_ARATH Zinc finger protein CONSTANS-LIKE 15 - Arabidopsis thaliana| (Mouse-ear cress) Length = 433 Score = 47.4 bits (111), Expect = 3e-04 Identities = 21/44 (47%), Positives = 32/44 (72%) Frame = +2 Query: 2411 REAAVNKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQS 2542 R A+ ++++KRK R + K +RY+SRK A+ R RVRG+FV+ S Sbjct: 385 RGDAMQRYKEKRKTRRYDKTIRYESRKARADTRLRVRGRFVKAS 428
>Q2ILG8:CHEB6_ANADE Chemotaxis response regulator protein-glutamate methylesterase 6 -| Anaeromyxobacter dehalogenans (strain 2CP-C) Length = 350 Score = 47.4 bits (111), Expect = 3e-04 Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 1/111 (0%) Frame = +2 Query: 542 KTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYL-EDVQNRIDLVLTEVAMP 718 +TLRVL+V++ +R + LL G ++ A D Q L E ++ D+V+ ++ MP Sbjct: 8 RTLRVLVVDDSAASRDELVRLLHG-GDGLVVAGTAADGEQGLAEALRLEPDVVVLDLQMP 66 Query: 719 CLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIR 871 + G L + + + PV+++S + VFK L GA+DF+ +P R Sbjct: 67 RMDGFTFLRLLMAR---RPTPVVVLSSRSRRADVFKALELGALDFVARPER 114
>P09432:NTRC_RHOCA Nitrogen regulation protein ntrC - Rhodobacter capsulatus| (Rhodopseudomonas capsulata) Length = 457 Score = 47.0 bits (110), Expect = 4e-04 Identities = 29/104 (27%), Positives = 58/104 (55%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGI 733 VL+ ++D R V+ L + G +V + + + +++E+ + DLV+++V MP +G+ Sbjct: 5 VLVADDDRTIRTVLTQALTRAGCKVHATASLMTLMRWVEEGKG--DLVISDVVMPDGNGL 62 Query: 734 GLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKP 865 L++I G+PVI++S +++ T + A D+L KP Sbjct: 63 EALARIARER--PGLPVIVISAQNTIMTAIQAAEADAYDYLPKP 104
>Q8RAZ3:CHEB_THETN Chemotaxis response regulator protein-glutamate methylesterase -| Thermoanaerobacter tengcongensis Length = 367 Score = 47.0 bits (110), Expect = 4e-04 Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 8/116 (6%) Frame = +2 Query: 542 KTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLED--------VQNRIDLV 697 K +RVL+V++ A +R+C +++ E ++ D V+ R D++ Sbjct: 3 KKIRVLVVDDS--------AFMRRCLKDILENEEDMEVIDTARDGNEAVKKAVELRPDVI 54 Query: 698 LTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKP 865 ++ MP + G+ L I S + C + + +S +++T F+ L GAVDF+ KP Sbjct: 55 TLDINMPVMDGLTALQYIMSLAPCPVVIISSLSTEGALTT-FEALELGAVDFVAKP 109
>O29221:CHEB_ARCFU Chemotaxis response regulator protein-glutamate methylesterase -| Archaeoglobus fulgidus Length = 349 Score = 47.0 bits (110), Expect = 4e-04 Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 3/109 (2%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVI-SAENGLDAWQYLEDVQNRIDLVLTEVAMPCL 724 +RVL+V++ R V +L K G EV+ +A+NG +A + + ++ + D++ ++ MP + Sbjct: 1 MRVLVVDDSALVRMAVTDILTKAGIEVVDTAKNGREAVE--KALKLKPDVITLDINMPEM 58 Query: 725 SGIGLLSKITSHSICKGIPVIMMSK--NDSMSTVFKCLSKGAVDFLVKP 865 G+ L I + PV+M+S + + L GAVDF+ KP Sbjct: 59 DGLTALKLIMEK---QPTPVVMLSSLTKEGARETLEALKIGAVDFVTKP 104
>P24086:Y2151_LEPIN Uncharacterized protein LA_2151 - Leptospira interrogans| Length = 135 Score = 46.6 bits (109), Expect = 6e-04 Identities = 28/112 (25%), Positives = 60/112 (53%), Gaps = 1/112 (0%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVIS-AENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 +VL+ EN + +L GY+VI AENG + + L D +DL+ ++ +P + Sbjct: 13 QVLIAENSRFQAKQLAQILESEGYQVIGFAENGKELVK-LYDEHRLVDLITLDLNLPVMD 71 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 G +I + I +++S+ ++ + + + +GA+D++ KPI++ ++ Sbjct: 72 GYATFFEIKGKGVLPRI--VIVSEENTPAVLKNLIDEGAMDYIPKPIKREKI 121
>Q72RH6:Y1769_LEPIC Uncharacterized protein LIC_11769 - Leptospira interrogans| serogroup Icterohaemorrhagiae serovar copenhageni Length = 135 Score = 46.6 bits (109), Expect = 6e-04 Identities = 28/112 (25%), Positives = 60/112 (53%), Gaps = 1/112 (0%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVIS-AENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 +VL+ EN + +L GY+VI AENG + + L D +DL+ ++ +P + Sbjct: 13 QVLIAENSRFQAKQLAQILESEGYQVIGFAENGKELVK-LYDEHRLVDLITLDLNLPVMD 71 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 G +I + I +++S+ ++ + + + +GA+D++ KPI++ ++ Sbjct: 72 GYATFFEIKGKGVLPRI--VIVSEENTPAVLKNLIDEGAMDYIPKPIKREKI 121
>Q04803:PFER_PSEAE Transcriptional activator protein pfeR - Pseudomonas aeruginosa| Length = 305 Score = 46.6 bits (109), Expect = 6e-04 Identities = 35/127 (27%), Positives = 59/127 (46%) Frame = +2 Query: 533 LPVKTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVA 712 + + + R+LLVE+D R + A R+ G+ V +G + + DLVL ++ Sbjct: 73 ISIPSPRLLLVEDDPRLREDLDAHFRRRGFRVTVCGDGSHGLEAAG--REAFDLVLLDIM 130 Query: 713 MPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTL 892 +P L G+ LL + + PV++MS + ++GA D+L KP EL Sbjct: 131 LPGLDGLALLESLRRE---QATPVMLMSALGAEQDRISGFTRGADDYLPKPFSLAELDAR 187 Query: 893 WQHIWRR 913 + RR Sbjct: 188 TDALLRR 194
>P41789:NTRC_SALTY Nitrogen regulation protein NR(I) - Salmonella typhimurium| Length = 469 Score = 46.6 bits (109), Expect = 6e-04 Identities = 31/113 (27%), Positives = 53/113 (46%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGI 733 V +V++D R V+ L G + ENG + L D++L+++ MP + G+ Sbjct: 6 VWVVDDDSSIRWVLERALAGAGLTCTTFENGNEVLAAL--ASKTPDVLLSDIRMPGMDGL 63 Query: 734 GLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTL 892 LL +I +PVI+M+ + + +GA D+L KP +E L Sbjct: 64 ALLKQIKQRHPM--LPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVAL 114
>P15940:NODW_BRAJA Nodulation protein W - Bradyrhizobium japonicum| Length = 227 Score = 46.6 bits (109), Expect = 6e-04 Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 1/111 (0%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQY-LEDVQNRIDLVLTEVAMPCLSG 730 V +VE+D R + L R G EV++ + + Q + DV + + L +V +P LSG Sbjct: 22 VFVVEDDISMRRSLTNLFRSVGLEVVAFGSAREMLQSTMPDVTSCLVL---DVRLPGLSG 78 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 + +++ +I IP+I ++ + + + + GAVDFL KP R EL Sbjct: 79 LDYQTELARLNI--HIPIIFITGHGDIPMTVRAMKGGAVDFLSKPFRDQEL 127
>P21866:KDPE_ECOLI KDP operon transcriptional regulatory protein kdpE - Escherichia| coli Length = 225 Score = 46.6 bits (109), Expect = 6e-04 Identities = 37/123 (30%), Positives = 55/123 (44%), Gaps = 3/123 (2%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAEN---GLDAWQYLEDVQNRIDLVLTEVAMPCL 724 VL+VE++ R +R L G V AE GL LE + DL++ ++ +P Sbjct: 4 VLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGL-----LEAATRKPDLIILDLGLPDG 58 Query: 725 SGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHI 904 GI + + S +PVI++S S L GA D+L KP EL+ + Sbjct: 59 DGIEFIRDLRQWS---AVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVA 115 Query: 905 WRR 913 RR Sbjct: 116 LRR 118
>P45365:YPH5_THIVI Uncharacterized 76.5 kDa protein in phbC 3'region - Thiocystis| violacea Length = 692 Score = 46.2 bits (108), Expect = 7e-04 Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 1/126 (0%) Frame = +2 Query: 509 RVIRWEKFLPVKTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQN-R 685 RV+R + R+L++E D + +LL G E + + D + L +Q R Sbjct: 125 RVLRMCGIVETVRYRILILEQDASHAKKIASLLATIGMETLVVD---DPMKILARMQAFR 181 Query: 686 IDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKP 865 +LVL ++ +P +G L + I H GIP++ +S+ + L G F+ KP Sbjct: 182 PNLVLMDLYLPGATGSELTTIIRDHDDFYGIPILFLSQEADLDKQLAALKAGGDGFIKKP 241 Query: 866 IRKNEL 883 + + L Sbjct: 242 VSREAL 247
>P48027:GACS_PSESY Sensor protein gacS - Pseudomonas syringae pv. syringae| Length = 907 Score = 46.2 bits (108), Expect = 7e-04 Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 3/114 (2%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 RVL V+++ +V+ LL G EV++ E G A ++ Q DLVL +V MP + G Sbjct: 658 RVLCVDDNPANLLLVQTLLEDMGAEVVAVEGGYAAVNAVQ--QEAFDLVLMDVQMPGMDG 715 Query: 731 IGLLSKITSHSICK---GIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 I + + +P++ ++ + + L G D+L KPI + +L Sbjct: 716 RQATEAIRAWEAERNQSSLPIVALTAHAMANEKRSLLQSGMDDYLTKPISERQL 769
>Q9K998:DCTR_BACHD Probable C4-dicarboxylate response regulator dctR - Bacillus| halodurans Length = 230 Score = 46.2 bits (108), Expect = 7e-04 Identities = 34/130 (26%), Positives = 65/130 (50%), Gaps = 8/130 (6%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKC-GYEVI----SAENGLDAWQYLEDVQNRIDLVLTEVA 712 +RVLL+E+D + V R + K G+ ++ + E G+ + L+ DL+L ++ Sbjct: 7 IRVLLIEDDPMVQEVNRMFVEKLSGFTIVGTTATGEEGMVKTRELQP-----DLILLDIF 61 Query: 713 MPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK-- 886 MP G+ + +I I + +I ++ + T+ L G +D+LVKP LK Sbjct: 62 MPKQDGLSFIKQIREQYI--DVDIIAVTAANDTKTIKTLLRYGVMDYLVKPFTFERLKAA 119 Query: 887 -TLWQHIWRR 913 T ++ ++R+ Sbjct: 120 LTQYEEMFRK 129
>O22800:COL14_ARATH Zinc finger protein CONSTANS-LIKE 14 - Arabidopsis thaliana| (Mouse-ear cress) Length = 402 Score = 46.2 bits (108), Expect = 7e-04 Identities = 19/53 (35%), Positives = 35/53 (66%) Frame = +2 Query: 2378 TDLVCQNQLSQREAAVNKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVR 2536 T+ + R+ A+ ++++K+K R + K +RY++RK AE R RV+G+FV+ Sbjct: 346 TNADLEQMAQNRDNAMQRYKEKKKTRRYDKTIRYETRKARAETRLRVKGRFVK 398
>Q9LJ44:COL12_ARATH Putative zinc finger protein CONSTANS-LIKE 12 - Arabidopsis thaliana| (Mouse-ear cress) Length = 337 Score = 46.2 bits (108), Expect = 7e-04 Identities = 20/48 (41%), Positives = 33/48 (68%) Frame = +2 Query: 2411 REAAVNKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQSGQED 2554 R A ++++K+ +R+FGK++RY SRK A+ R RV+G+FV+ D Sbjct: 280 RNEAKLRYKEKKLKRSFGKQIRYASRKARADTRKRVKGRFVKAGDSYD 327
>Q30RX5:CHEB_THIDN Chemotaxis response regulator protein-glutamate methylesterase -| Thiomicrospira denitrificans (strain ATCC 33889 / DSM 1351) Length = 352 Score = 46.2 bits (108), Expect = 7e-04 Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 3/109 (2%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLED-VQNRIDLVLTEVAMPCL 724 +RVL+V++ R V++ +L K E+ DA+ + VQ + D++ +V MP + Sbjct: 3 IRVLIVDDSATARTVLKDVLSKDS-EIEVIATAPDAYVARDKIVQLKPDVICLDVEMPRM 61 Query: 725 SGIGLLSKITSHSICKGIPVIMMSK--NDSMSTVFKCLSKGAVDFLVKP 865 GI L KI + PV+M+S D F L GA+D++ KP Sbjct: 62 DGISFLKKIMKYF---PTPVLMVSSLTQDGAQVTFDALEAGAIDYVAKP 107
>Q65JK6:CHEB_BACLD Chemotaxis response regulator protein-glutamate methylesterase -| Bacillus licheniformis (strain DSM 13 / ATCC 14580) Length = 357 Score = 46.2 bits (108), Expect = 7e-04 Identities = 31/111 (27%), Positives = 60/111 (54%), Gaps = 5/111 (4%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVI---SAENGLDAWQYLEDVQNRIDLVLTEVAMP 718 +RVL+V++ R+++ L +E+ +A NG +A Q ++++ R D++ ++ MP Sbjct: 2 IRVLVVDDSAFMRNMITKFLTS-NHEIAVAGTARNGEEALQKIKEL--RPDVITLDIEMP 58 Query: 719 CLSGIGLLSKITSHSICKGIPVIMMSK--NDSMSTVFKCLSKGAVDFLVKP 865 ++G L +I + +PV+M+S +CL GA+DF+ KP Sbjct: 59 VMNGKETLKRIMASD---PLPVVMVSSLTQQGADITIECLELGAIDFVAKP 106
>Q0AYL3:CHEB1_SYNWW Chemotaxis response regulator protein-glutamate methylesterase 1 -| Syntrophomonas wolfei subsp. wolfei (strain Goettingen) Length = 352 Score = 46.2 bits (108), Expect = 7e-04 Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 4/118 (3%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCG-YEVIS-AENGLDAWQYLEDVQNRIDLVLTEVAMPCL 724 +VL+V++ R ++ ++ E++ A NG +A + + ++Q D+V+ ++ MP L Sbjct: 5 KVLVVDDSAFMRKMIGDMINSDDELEIVGKAGNGQEALEKIRELQP--DVVVMDIEMPVL 62 Query: 725 SGIGLLSKITSHSICKGIPVIMMSKNDSMST--VFKCLSKGAVDFLVKPIRKNELKTL 892 G+ LS+I + +PVI+ S T K L GAVDF+ KP + L L Sbjct: 63 DGLSTLSRIMES---QALPVIIFSSLSQKGTEQTLKALQLGAVDFIAKPSGQISLDVL 117
>Q8F6P9:CHEB1_LEPIN Chemotaxis response regulator protein-glutamate methylesterase of| group 1 operon - Leptospira interrogans Length = 357 Score = 46.2 bits (108), Expect = 7e-04 Identities = 28/110 (25%), Positives = 58/110 (52%), Gaps = 4/110 (3%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCG--YEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPC 721 +R +++++ R+++ ++K + V + + G+D + + D+++ +V MP Sbjct: 6 VRAVIIDDSLLVRNIISDQIQKDSKIHVVATGKTGMDCIDLAQKMNP--DVIILDVEMPV 63 Query: 722 LSGIGLLSKITSHSICKGIPVIMMS--KNDSMSTVFKCLSKGAVDFLVKP 865 + G+ L ++ + GIPVIM+S + FK L GA+DF+ KP Sbjct: 64 MDGLTALHELQKKKL--GIPVIMLSVLTQNGAEATFKALEYGAIDFVPKP 111
>P62641:CHEB1_LEPIC Chemotaxis response regulator protein-glutamate methylesterase of| group 1 operon - Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni Length = 357 Score = 46.2 bits (108), Expect = 7e-04 Identities = 28/110 (25%), Positives = 58/110 (52%), Gaps = 4/110 (3%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCG--YEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPC 721 +R +++++ R+++ ++K + V + + G+D + + D+++ +V MP Sbjct: 6 VRAVIIDDSLLVRNIISDQIQKDSKIHVVATGKTGMDCIDLAQKMNP--DVIILDVEMPV 63 Query: 722 LSGIGLLSKITSHSICKGIPVIMMS--KNDSMSTVFKCLSKGAVDFLVKP 865 + G+ L ++ + GIPVIM+S + FK L GA+DF+ KP Sbjct: 64 MDGLTALHELQKKKL--GIPVIMLSVLTQNGAEATFKALEYGAIDFVPKP 111
>O34903:YKOG_BACSU Uncharacterized sensory transduction protein ykoG - Bacillus| subtilis Length = 228 Score = 45.8 bits (107), Expect = 0.001 Identities = 32/110 (29%), Positives = 53/110 (48%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGI 733 +L+VE+++ V++ L GY V NG + + LVL +V +P LSG+ Sbjct: 6 ILIVEDEEKIARVLQLELEYEGYSVTIKHNGTEGLDAA--AEGGYSLVLLDVMLPGLSGL 63 Query: 734 GLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 +L ++ PVI+++ DS+ L GA D++ KP EL Sbjct: 64 EVLRRLRKTD--SQTPVILLTARDSIPDKVTGLDIGANDYVTKPFEIEEL 111
>P06628:SP0F_BACSU Sporulation initiation phosphotransferase F - Bacillus subtilis| Length = 124 Score = 45.8 bits (107), Expect = 0.001 Identities = 30/112 (26%), Positives = 58/112 (51%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 ++L+V++ R ++ + K GY+ A NGL A + + R DLVL ++ +P + G Sbjct: 5 KILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIV--TKERPDLVLLDMKIPGMDG 62 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 886 I +L ++ I + I VI+M+ + + + GA+ KP +E++ Sbjct: 63 IEILKRM--KVIDENIRVIIMTAYGELDMIQESKELGALTHFAKPFDIDEIR 112
>Q52990:PHOB_RHIME Phosphate regulon transcriptional regulatory protein phoB -| Rhizobium meliloti (Sinorhizobium meliloti) Length = 227 Score = 45.8 bits (107), Expect = 0.001 Identities = 32/121 (26%), Positives = 63/121 (52%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 ++ +VE+++ ++R L G+EV + G +A L++ DL++ + +P +SG Sbjct: 4 KIAVVEDEEALSVLLRYNLEAEGFEVDTILRGDEAEIRLQE--RLPDLLILDWMLPGVSG 61 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWR 910 I L ++ + +P+IM++ S + L+ GA D++VKP EL + + R Sbjct: 62 IELCRRLRQRPETERLPIIMLTARGEESERVRGLATGADDYVVKPFSTPELMARVKAMLR 121 Query: 911 R 913 R Sbjct: 122 R 122
>Q47456:PCOR_ECOLI Transcriptional regulatory protein pcoR - Escherichia coli| Length = 226 Score = 45.8 bits (107), Expect = 0.001 Identities = 33/121 (27%), Positives = 60/121 (49%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 R+L+VE++ T ++ L + GY+ NG D + + DL++ +V +P L G Sbjct: 3 RILIVEDEQKTGRYLQQGLVEEGYQADLFNNGRDGLGAAS--KGQYDLIILDVMLPFLDG 60 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWR 910 ++S + + PV+ ++ D++ K L GA D+L+KP EL + + R Sbjct: 61 WQIISALRESGHEE--PVLFLTAKDNVRDKVKGLELGADDYLIKPFDFTELVARVRTLLR 118 Query: 911 R 913 R Sbjct: 119 R 119
>P96602:DCTR_BACSU Probable C4-dicarboxylate response regulator dctR - Bacillus| subtilis Length = 226 Score = 45.8 bits (107), Expect = 0.001 Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 2/117 (1%) Frame = +2 Query: 542 KTLRVLLVENDDCTRHVVRALLRKCGYEVI--SAENGLDAWQYLEDVQNRIDLVLTEVAM 715 K +VLL+E+D + V + + + +A NG + + +++ Q DLV+ +V M Sbjct: 4 KEWKVLLIEDDPMVQEVNKDFITTVKGVTVCATAGNGEEGMKLIKEEQP--DLVILDVYM 61 Query: 716 PCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 886 P GI L +I + + VI++S T+ L GAVD+++KP + ++ Sbjct: 62 PKKDGIKTLQEIRKQKL--EVDVIVVSAAKDKETISLMLQNGAVDYILKPFKLERMR 116
>P94413:YCLJ_BACSU Uncharacterized sensory transduction protein yclJ - Bacillus| subtilis Length = 227 Score = 45.4 bits (106), Expect = 0.001 Identities = 25/106 (23%), Positives = 53/106 (50%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 +++L++E++ + K G+E +GL+ +Q + DL++ ++ +P + Sbjct: 1 MKILMIEDNVSVCTMTEMFFFKEGFEAEFVHDGLEGYQRF--TEENWDLIILDIMLPSMD 58 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKP 865 G+ + KI S +P+IM++ D+ S GA D++ KP Sbjct: 59 GVTICRKIRETST---VPIIMLTAKDTESDQVIGFEMGADDYVTKP 101
>O14283:PRR1_SCHPO Transcription factor prr1 - Schizosaccharomyces pombe (Fission| yeast) Length = 539 Score = 45.4 bits (106), Expect = 0.001 Identities = 32/114 (28%), Positives = 52/114 (45%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 R+LLVE+D+ +R + L +V A +G+ A DL+L + +P L G Sbjct: 369 RILLVEDDELSRRMTIKFLTSFDCQVDVAVDGIGAVNKAN--AGGFDLILMDFILPNLDG 426 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTL 892 + + I + P++ ++ N SM+ + G D LVKP K L L Sbjct: 427 LSVTCLIRQYD--HNTPILAITSNISMNDAVTYFNHGVTDLLVKPFTKLTLLQL 478
>P40138:CYAB_STIAU Adenylate cyclase 2 - Stigmatella aurantiaca| Length = 352 Score = 45.4 bits (106), Expect = 0.001 Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 2/123 (1%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCG--YEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCL 724 RV++V++ V+ L G YEV+ ++ +A + + VQ I VL+++ MP + Sbjct: 7 RVMVVDDSPLACDFVKEGLEALGLGYEVMCFQDPYEALEQVGKVQPAI--VLSDLDMPGI 64 Query: 725 SGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHI 904 G+ L ++ S + +PVI+++ NDS + K L GA D++ K EL + + Sbjct: 65 DGLELCWRL-KESPSRQVPVIILTANDSEAERVKGLRAGADDYVNKSASMAELSARIESV 123 Query: 905 WRR 913 RR Sbjct: 124 MRR 126
>Q39T95:CHEB2_GEOMG Chemotaxis response regulator protein-glutamate methylesterase 2 -| Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) Length = 360 Score = 45.4 bits (106), Expect = 0.001 Identities = 36/129 (27%), Positives = 65/129 (50%), Gaps = 4/129 (3%) Frame = +2 Query: 539 VKTLRVLLVENDDCTRHVVRALLRKCGYEVIS--AENGLDAWQYLEDVQNRIDLVLTEVA 712 ++ +RV+++++ R + +L V++ A +G + + + D++ DLV ++ Sbjct: 1 MRKIRVVVIDDSAFNRRAIIKMLESMPEVVVAGYANDGEEGIRKVIDLKP--DLVTLDLE 58 Query: 713 MPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIR--KNELK 886 MP + G LL I + PVI++S VFK L GAVDF+ KP + EL Sbjct: 59 MPKMDGFTLLRIIMGYC---PTPVIVISAKSDDEKVFKALELGAVDFVAKPSQGISEELL 115 Query: 887 TLWQHIWRR 913 T+ I ++ Sbjct: 116 TITDDIQQK 124
>P06184:PGTA_SALTY Phosphoglycerate transport system transcriptional regulatory| protein pgtA - Salmonella typhimurium Length = 415 Score = 45.1 bits (105), Expect = 0.002 Identities = 31/120 (25%), Positives = 60/120 (50%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGI 733 +LL+++D +L + GY V + +A ++++ I VL++V MP SGI Sbjct: 8 ILLIDDDVDVLDAYTQMLEQAGYRVRGFTHPFEAKEWVKADWEGI--VLSDVCMPGCSGI 65 Query: 734 GLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 913 L++ H +P+++++ + + + KGA DFL KP+ +L L + R+ Sbjct: 66 DLMTLF--HQDDDQLPILLITGHGDVPMAVDAVKKGAWDFLQKPVDPGKLLILIEDALRQ 123
>Q9KT84:LUXO1_VIBCH Regulatory protein luxO - Vibrio cholerae| Length = 455 Score = 45.1 bits (105), Expect = 0.002 Identities = 28/110 (25%), Positives = 56/110 (50%), Gaps = 1/110 (0%) Frame = +2 Query: 560 LVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRI-DLVLTEVAMPCLSGIG 736 +VE+ + R+ L ++ G DA +E + R DL+L ++ +P ++G+ Sbjct: 1 MVEDTASVAALYRSYLTPLDIDINIVGTGRDA---IESIGRREPDLILLDLRLPDMTGMD 57 Query: 737 LLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 886 +L + S +P++ M+ + S+ T + + GA DFL+KP + L+ Sbjct: 58 VLYAVKEKS--PDVPIVFMTAHGSIDTAVEAMRHGAQDFLIKPCEADRLR 105
>Q9K621:BCER_BACHD Sensory transduction protein bceR - Bacillus halodurans| Length = 231 Score = 45.1 bits (105), Expect = 0.002 Identities = 31/121 (25%), Positives = 54/121 (44%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 +++L+E+D ++ L + Y+V N + E + DLV+ ++ +P G Sbjct: 3 KIMLIEDDHTLFSEIKERLSQWSYDVFGVSNFEKVIE--EFTSLKPDLVIIDIQLPKFDG 60 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWR 910 I HS +P+I +S D + + + GA DF+ KP + L Q I R Sbjct: 61 FHWCRMIRQHS---NVPIIFLSSRDHPTDMVMSMQLGADDFIQKPFHFDVLVAKIQAILR 117 Query: 911 R 913 R Sbjct: 118 R 118
>P03029:NTRC_KLEPN Nitrogen assimilation regulatory protein - Klebsiella pneumoniae| Length = 469 Score = 44.7 bits (104), Expect = 0.002 Identities = 29/111 (26%), Positives = 52/111 (46%) Frame = +2 Query: 560 LVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGL 739 +V++D R V+ L G + E+G + L D++L+++ MP + G+ L Sbjct: 8 IVDDDSSIRWVLERALTGAGLSCTTFESGNEVLDAL--TTKTPDVLLSDIRMPGMDGLAL 65 Query: 740 LSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTL 892 L +I +PVI+M+ + + +GA D+L KP +E L Sbjct: 66 LKQIKQRHPM--LPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVAL 114
>P62646:CHEB_TREDE Chemotaxis response regulator protein-glutamate methylesterase -| Treponema denticola Length = 372 Score = 44.7 bits (104), Expect = 0.002 Identities = 33/113 (29%), Positives = 61/113 (53%), Gaps = 4/113 (3%) Frame = +2 Query: 539 VKTLRVLLVENDDCTRHVVRALLRKC-GYEVIS-AENGLDAWQYLEDVQNRIDLVLTEVA 712 ++ +RVL+V++ R+++ ++ G ++ A NG A Q LE V D+++ ++ Sbjct: 1 MEDIRVLIVDDSALMRNLIGKIVDATPGLKIADKAMNGRFALQKLERVAP--DVIVLDLE 58 Query: 713 MPCLSGIGLLSKITSHSICKGIPVIMMSK--NDSMSTVFKCLSKGAVDFLVKP 865 MP ++GI L ++ +I IPV+++S + CL GA DF+ KP Sbjct: 59 MPEMNGIEFLRELKKQNI--KIPVVILSSIAKEGAKVTMDCLELGACDFITKP 109
>Q67P67:CHEB_SYMTH Chemotaxis response regulator protein-glutamate methylesterase -| Symbiobacterium thermophilum Length = 362 Score = 44.7 bits (104), Expect = 0.002 Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 4/112 (3%) Frame = +2 Query: 542 KTLRVLLVENDDCTRHVVRALLRKCGYEVI--SAENGLDAWQYLEDVQNRIDLVLTEVAM 715 + +RVL+V++ R V+ LL + +A +G D + + +Q D+V ++ M Sbjct: 7 RPIRVLVVDDSAFMRKVLTELLESDPLITVVGTARDGQDGLEKVLQLQP--DVVTLDIEM 64 Query: 716 PCLSGIGLLSKITSHSICKGIPVIMMSKN--DSMSTVFKCLSKGAVDFLVKP 865 P L G G L +I + + PV+M+S + + + L+ GAVDF+ KP Sbjct: 65 PRLDGYGTLREIMAR---RPTPVVMVSSHTREGAEATIRALALGAVDFVAKP 113
>P62647:CHEB_METMP Chemotaxis response regulator protein-glutamate methylesterase -| Methanococcus maripaludis Length = 365 Score = 44.7 bits (104), Expect = 0.002 Identities = 33/111 (29%), Positives = 66/111 (59%), Gaps = 5/111 (4%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCG-YEVIS-AENGLDAWQYLEDVQNRIDLVLTEVAMPC 721 ++VL+V++ R V+ +L+ EV++ A++G +A++ ++ ++ + + +V MP Sbjct: 4 IKVLIVDDSAFMRKVLEDILKSDDEIEVVATAKDGKEAFELVKKLEPNV--ITMDVEMPI 61 Query: 722 LSGIGLLSKITSHSICKGIPVIMMS---KNDSMSTVFKCLSKGAVDFLVKP 865 ++GI +I ++ K P++M+S K S +T+ K L GAVDF+ KP Sbjct: 62 MNGIDATKQIMAY---KPTPILMLSAVTKQGSEATL-KALDNGAVDFIEKP 108
>O31395:IRLR_BURPS Transcriptional activator protein irlR - Burkholderia pseudomallei| (Pseudomonas pseudomallei) Length = 229 Score = 44.3 bits (103), Expect = 0.003 Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 1/123 (0%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 +R+L+VE++ T +R L + G+ E+G+ E + DL++ +V +P Sbjct: 1 MRILIVEDEPKTGMYLRKGLTEAGFIADWVEDGVTGLHQAETEE--YDLIILDVMLPGHD 58 Query: 728 GIGLLSKIT-SHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHI 904 G +L ++ +HS PV+ ++ D + K L GA D++VKP EL + I Sbjct: 59 GWTVLERLRRAHST----PVLFLTARDDVGDRVKGLELGADDYVVKPFDFVELVARVRSI 114 Query: 905 WRR 913 RR Sbjct: 115 LRR 117
>P62640:CHEB3_GEOSL Chemotaxis response regulator protein-glutamate methylesterase of| group 3 operon - Geobacter sulfurreducens Length = 371 Score = 44.3 bits (103), Expect = 0.003 Identities = 35/129 (27%), Positives = 67/129 (51%), Gaps = 4/129 (3%) Frame = +2 Query: 539 VKTLRVLLVENDDCTRHVVRALLRKCG-YEVIS-AENGLDAWQYLEDVQNRIDLVLTEVA 712 ++ +RV+++++ +R + +L EVI A +G + + + D++ DLV ++ Sbjct: 1 MRKIRVVVIDDSAYSRRAITKMLESMPEVEVIGYATDGEEGIRKIIDLKP--DLVTLDLE 58 Query: 713 MPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIR--KNELK 886 MP + G LL + +S VI++S VF+ L GAVDF+ KP + E+ Sbjct: 59 MPRMDGFTLLRIVMEYS---PTAVIVISSRSEDEKVFRALELGAVDFVAKPTKGVSEEIL 115 Query: 887 TLWQHIWRR 913 T+ + + R+ Sbjct: 116 TIREDLHRK 124
>Q9P896:TCSA_EMENI Two-component system protein A - Emericella nidulans (Aspergillus| nidulans) Length = 719 Score = 43.9 bits (102), Expect = 0.004 Identities = 34/123 (27%), Positives = 62/123 (50%), Gaps = 4/123 (3%) Frame = +2 Query: 554 VLLVENDDCTRHV--VRALLRKCGYEVIS-AENGLDAWQYLEDVQNRIDLVLTEVAMPCL 724 VLLVE D+ H V A + G++ I A NG +A + + D++L +V+MP L Sbjct: 561 VLLVE-DNIVNHTRYVEAPTYQFGFQRIDGAWNGAEAVRMVRQKPLSYDIILMDVSMPVL 619 Query: 725 SGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNE-LKTLWQH 901 G+ +I + +P+I ++ N +++G D + KP+ +++ L+ LW+ Sbjct: 620 DGLAATEQIRDMGLT--MPIIAITGNAMKGDAETYIAQGMDDCICKPVHRDQLLRVLWKW 677 Query: 902 IWR 910 R Sbjct: 678 FGR 680
>Q9AE24:RPRY_BACFR Transcriptional regulatory protein rprY - Bacteroides fragilis| Length = 236 Score = 43.9 bits (102), Expect = 0.004 Identities = 32/122 (26%), Positives = 58/122 (47%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 LR+LL E+D+ ++R L+ GY +G ++ ++N+ DL + +V MP Sbjct: 8 LRILLCEDDENLGMLLREYLQAKGYSAELYPDGEAGFKAF--LKNKYDLCVFDVMMPKKD 65 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIW 907 G L ++ + + IP+I ++ + + GA D++ KP EL + I Sbjct: 66 GFTLAQEVRAANA--EIPIIFLTAKTLKEDILEGFKIGADDYITKPFSMEELTFRIEAIL 123 Query: 908 RR 913 RR Sbjct: 124 RR 125
>Q9KLK7:LUXQ_VIBCH Autoinducer 2 sensor kinase/phosphatase luxQ - Vibrio cholerae| Length = 857 Score = 43.9 bits (102), Expect = 0.004 Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 4/124 (3%) Frame = +2 Query: 542 KTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPC 721 KTLRVLLVE++ + +A RK G +V +GL A + L+ + DLVL + +P Sbjct: 728 KTLRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELK--IHDYDLVLMDNQLPY 785 Query: 722 LSGIGLLSKITSHSICK--GIPVIM--MSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKT 889 L G+ T+ +I K +PV++ + + T GA LVKP+++ L Sbjct: 786 LDGVE-----TTRTIKKVLHLPVVVYACTADGLEETRQAFFHAGAEYVLVKPLKEQTLHK 840 Query: 890 LWQH 901 +H Sbjct: 841 ALEH 844
>Q97GZ3:CHEB_CLOAB Chemotaxis response regulator protein-glutamate methylesterase -| Clostridium acetobutylicum Length = 345 Score = 43.9 bits (102), Expect = 0.004 Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 4/129 (3%) Frame = +2 Query: 539 VKTLRVLLVENDDCTRHVVRALLRKC-GYEVI-SAENGLDAWQYLEDVQNRIDLVLTEVA 712 ++ ++V++V++ R ++ +L EVI +A NG D L+ ++ D++ ++ Sbjct: 1 MEKIKVIVVDDSVLMRRLICDMLESNDNIEVIGTAINGQDLLNKLKVMKP--DVITLDIE 58 Query: 713 MPCLSGIGLLSKITSHSICKGIPVIMMSK--NDSMSTVFKCLSKGAVDFLVKPIRKNELK 886 MP ++GI L + S I IP+I+ S M +CL GA DF+ KP + EL Sbjct: 59 MPVMNGIETLKAVKSLKI--DIPIIVFSSISQKGMKYTMECLYLGAFDFIPKPEKPFELS 116 Query: 887 TLWQHIWRR 913 + + +R Sbjct: 117 KMKDDLIKR 125
>Q39QJ2:CHEB5_GEOMG Chemotaxis response regulator protein-glutamate methylesterase 5 -| Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) Length = 357 Score = 43.9 bits (102), Expect = 0.004 Identities = 33/111 (29%), Positives = 63/111 (56%), Gaps = 2/111 (1%) Frame = +2 Query: 542 KTLRVLLVENDDCTRHVVRALLRK-CGYEVIS-AENGLDAWQYLEDVQNRIDLVLTEVAM 715 + LRVL+V++ R V+R++L K EVI+ A +G++ + + + R DL+ ++ M Sbjct: 7 RKLRVLVVDDSSFMRMVIRSVLEKDPAIEVIAVAMDGVEGVE--KALALRPDLITMDIEM 64 Query: 716 PCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPI 868 P L GI L +I + + + + V ++ + +T F L GA+D++ K + Sbjct: 65 PRLDGISALKEIMAKAPTRVLMVSTLTCEGAKAT-FDALDAGAIDYIPKNV 114
>Q1IQS9:CHEB2_ACIBL Chemotaxis response regulator protein-glutamate methylesterase 2 -| Acidobacteria bacterium (strain Ellin345) Length = 363 Score = 43.9 bits (102), Expect = 0.004 Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 4/110 (3%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKC-GYEVI-SAENGLDAWQYLEDVQNRIDLVLTEVAMPC 721 +RVL+V++ R ++ +L+K EVI +A +G + +E++ R D+V ++ MP Sbjct: 6 IRVLVVDDSALMRKMITQMLQKDPAIEVIGTAMDGAFGLKKIEEL--RPDVVTLDLEMPN 63 Query: 722 LSGIGLLSKITSHSICKGIPVIMMSKNDSMST--VFKCLSKGAVDFLVKP 865 + G+ +L IT PVI++S + + FK L GA DF+ KP Sbjct: 64 MDGMEMLRHITKRG---QTPVIVVSAHTTQGARETFKALQLGAFDFVAKP 110
>Q06239:VANR_ENTFC Regulatory protein vanR - Enterococcus faecium (Streptococcus| faecium) Length = 231 Score = 43.5 bits (101), Expect = 0.005 Identities = 28/111 (25%), Positives = 55/111 (49%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 ++L+V+++ +V L+ Y V +A + ++ ++ IDL + ++ +P SG Sbjct: 4 KILIVDDEHEIADLVELYLKNENYTVFKYYTAKEALECID--KSEIDLAILDIMLPGTSG 61 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 + + KI P+IM++ D+ L+ GA D++ KP R EL Sbjct: 62 LTICQKIRDKHT---YPIIMLTGKDTEVDKITGLTIGADDYITKPFRPLEL 109
>Q8GP20:RSSB_SERMA Swarming motility regulation protein rssB - Serratia marcescens| Length = 219 Score = 43.5 bits (101), Expect = 0.005 Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 6/128 (4%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAW-QYLEDVQNRI-----DLVLTEV 709 + +LLVE+D + L G+ + W + + D +N++ DL+L ++ Sbjct: 1 MNILLVEDDLQLGKALCRALELAGFNL--------CWVRLIADAENKLSSGGFDLMLLDL 52 Query: 710 AMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKT 889 +P G GL I + + IP+I+++ D + ++ L GA DFL KP EL + Sbjct: 53 TLP--DGDGLQKLIAWRAAGQNIPIIILTARDRIESLVNSLDSGANDFLAKPFALPELIS 110 Query: 890 LWQHIWRR 913 + + RR Sbjct: 111 RVKAVNRR 118
>P23221:FIXJ_BRAJA Transcriptional regulatory protein fixJ - Bradyrhizobium japonicum| Length = 205 Score = 43.5 bits (101), Expect = 0.005 Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 1/114 (0%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQN-RIDLVLTEVAMPCLSG 730 + ++++D R + LL G+ V + DA +L+ + V+++V MP L G Sbjct: 7 IYVIDDDAAMRDSLNFLLDSAGFGVTLFD---DAQAFLDALPGLSFGCVVSDVRMPGLDG 63 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTL 892 I LL ++ + P+++M+ + + + + GAVDFL KP + L + Sbjct: 64 IELLKRMKAQQ--SPFPILIMTGHGDVPLAVEAMKLGAVDFLEKPFEDDRLTAM 115
>P37599:CHEV_BACSU Chemotaxis protein cheV - Bacillus subtilis| Length = 303 Score = 43.5 bits (101), Expect = 0.005 Identities = 22/90 (24%), Positives = 50/90 (55%), Gaps = 8/90 (8%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYE-VISAENGLDAWQYL-------EDVQNRIDLVLTE 706 ++++VE+ +++ L++ GY + S ENG +A++Y+ D+ +ID+++T+ Sbjct: 176 KLIIVEDSPLLMRLLQDELKEAGYNNIASFENGKEAYEYIMNLAENETDLSKQIDMIITD 235 Query: 707 VAMPCLSGIGLLSKITSHSICKGIPVIMMS 796 + MP + G L + + +PV++ S Sbjct: 236 IEMPKMDGHRLTKLLKENPKSSDVPVMIFS 265
>O34951:BCER_BACSU Sensory transduction protein bceR - Bacillus subtilis| Length = 231 Score = 43.5 bits (101), Expect = 0.005 Identities = 31/121 (25%), Positives = 55/121 (45%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 ++LL+E+D+ H ++ L Y+V ++ Q V D V+ +V +P G Sbjct: 3 KLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNP--DCVIIDVQLPKFDG 60 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWR 910 I S S +P++ +S D + + + GA DF+ KP + L Q ++R Sbjct: 61 FHWCRLIRSRS---NVPILFLSSRDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFR 117 Query: 911 R 913 R Sbjct: 118 R 118
>Q9P4U6:TCSB_EMENI Two-component system protein B precursor - Emericella nidulans| (Aspergillus nidulans) Length = 1070 Score = 43.1 bits (100), Expect = 0.006 Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 4/120 (3%) Frame = +2 Query: 539 VKTLRVLLVENDDCTRHVV-RALLRKCGYEVISAENGLDAWQYLEDVQNR---IDLVLTE 706 +K +R L+ E++ + VV R L + Y+V ++G +A+ ++ DL+ + Sbjct: 930 LKKIRALVAEDNVVNQEVVLRMLALEDVYDVTVVKDGQEAYDTVKANMEEGKVFDLIFMD 989 Query: 707 VAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 886 + MP L GI +++ C P++ +S S + C++ G F+ KPIR+ LK Sbjct: 990 IQMPNLDGIES-TRLIRQMGCSA-PIVALSAFSEDSNIKDCMNSGMDMFISKPIRRPALK 1047
>Q1RJS1:NTRXL_RICBR Putative response regulator ntrX-like - Rickettsia bellii (strain| RML369-C) Length = 478 Score = 43.1 bits (100), Expect = 0.006 Identities = 28/115 (24%), Positives = 60/115 (52%), Gaps = 2/115 (1%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPC--LS 727 VL+V++++ R+++ A+L+ G+ A N A + L + + V+ ++ + + Sbjct: 6 VLIVDDEEDIRNIIAAILKDEGFNPKVAANSTQALKIL--AEKPVSAVILDIWLQGSEMD 63 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTL 892 G+G+L I +PVI++S + ++ T + GA D++ KP ++L L Sbjct: 64 GLGILEVIKKRYPL--MPVIIISGHGTIETAVNAIKMGAYDYIEKPFNNDKLVIL 116
>Q9UYF3:CHEB_PYRAB Chemotaxis response regulator protein-glutamate methylesterase -| Pyrococcus abyssi Length = 368 Score = 43.1 bits (100), Expect = 0.006 Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 14/129 (10%) Frame = +2 Query: 542 KTLRVLLVENDDCTRHVVRALLRK------CGYEVISAENGLDAWQYLEDVQN-RIDLVL 700 + +RVL+V++ R V++ ++ CG A +G++A +E VQ R D+V Sbjct: 6 RKIRVLVVDDSAFMRKVLKDIINSDPELEVCG----EARDGIEA---IEMVQKCRPDVVT 58 Query: 701 TEVAMPCLSGIGLLSKITSHSICKGIPVIMMSK--NDSMSTVFKCLSKGAVDFLVKP--- 865 +V MP ++G+ L I +PVIM+S + K L GA+DF+ KP Sbjct: 59 LDVEMPRMNGLDALRVIMKKY---PVPVIMISALTQEGAEATIKALEYGAIDFIPKPSSS 115 Query: 866 --IRKNELK 886 I ELK Sbjct: 116 ISINMRELK 124
>P28787:NTRC_PROVU Nitrogen regulation protein NR(I) - Proteus vulgaris| Length = 473 Score = 42.7 bits (99), Expect = 0.008 Identities = 30/113 (26%), Positives = 54/113 (47%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGI 733 V +V++D R V+ + + G + E+ D + L Q D++L+++ MP + G+ Sbjct: 6 VWVVDDDSSIRWVLERAITREGMLCRAFEHANDVLKALNSEQP--DVLLSDIRMPDMDGL 63 Query: 734 GLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTL 892 LL I +PVI+M+ + + +GA D+L KP +E L Sbjct: 64 SLLKIIKEQY--PTLPVIIMTAHSDLDAAVNAYQQGAFDYLPKPFDIDETLAL 114
>P26487:FIXJ_AZOCA Transcriptional regulatory protein fixJ - Azorhizobium caulinodans| Length = 211 Score = 42.7 bits (99), Expect = 0.008 Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 3/111 (2%) Frame = +2 Query: 542 KTLRVLLVENDDCTRHVVRALLRKCGYEVI---SAENGLDAWQYLEDVQNRIDLVLTEVA 712 ++L V ++++DD R + LL G V SA LDA L+ ++T+V Sbjct: 3 ESLPVHVIDDDDAVRESLAFLLESSGLAVTQHTSAAAFLDAGVPLDR-----GCIVTDVR 57 Query: 713 MPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKP 865 MP +SG+ LL ++ + + VI+M+ + + + + GA DFL KP Sbjct: 58 MPGISGLELLKELNARGA--HMAVIVMTGHGDVPLAVEAMKLGAADFLEKP 106
>P13632:DCTD_RHIME C4-dicarboxylate transport transcriptional regulatory protein dctD| - Rhizobium meliloti (Sinorhizobium meliloti) Length = 460 Score = 42.7 bits (99), Expect = 0.008 Identities = 26/110 (23%), Positives = 55/110 (50%) Frame = +2 Query: 554 VLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGI 733 V L+++D R ++ L G+ V S + +A L + +V++++ MP + G+ Sbjct: 7 VFLIDDDRDLRKAMQQTLELAGFTVSSFASATEALAGLS--ADFAGIVISDIRMPGMDGL 64 Query: 734 GLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 883 L KI + + +P+I+++ + + + + GA DF+ KP + L Sbjct: 65 ALFRKILA--LDPDLPMILVTGHGDIPMAVQAIQDGAYDFIAKPFAADRL 112
>O58192:CHEB_PYRHO Chemotaxis response regulator protein-glutamate methylesterase -| Pyrococcus horikoshii Length = 368 Score = 42.4 bits (98), Expect = 0.011 Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 14/129 (10%) Frame = +2 Query: 542 KTLRVLLVENDDCTRHVVRALLRK------CGYEVISAENGLDAWQYLEDVQN-RIDLVL 700 + ++VL+V++ R V++ ++ CG A +G++A +E VQ R D+V Sbjct: 6 RKIKVLVVDDSAFMRKVLKDIINSDPELEVCG----EARDGIEA---IEMVQKCRPDVVT 58 Query: 701 TEVAMPCLSGIGLLSKITSHSICKGIPVIMMSK--NDSMSTVFKCLSKGAVDFLVKP--- 865 +V MP ++G+ L I +PVIM+S + K L GA+DF+ KP Sbjct: 59 LDVEMPRMNGLDALRVIMKRY---PVPVIMISALTQEGADATIKALEYGAIDFIPKPSSS 115 Query: 866 --IRKNELK 886 I ELK Sbjct: 116 ISINMKELK 124
>Q5L0L0:CHEB_GEOKA Chemotaxis response regulator protein-glutamate methylesterase -| Geobacillus kaustophilus Length = 349 Score = 42.4 bits (98), Expect = 0.011 Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 4/113 (3%) Frame = +2 Query: 539 VKTLRVLLVENDDCTRHVVRALLRKCG-YEVI-SAENGLDAWQYLEDVQNRIDLVLTEVA 712 +KT++VL+V++ R + L + EVI +A NG +A + + + R D+V +V Sbjct: 1 MKTIKVLVVDDSAFMRKWISDFLSEHPRLEVIGTARNGREALEKIAAL--RPDVVTLDVE 58 Query: 713 MPCLSGIGLLSKITSHSICKGIPVIMMSKN--DSMSTVFKCLSKGAVDFLVKP 865 MP ++G+ L +I +PV+M+S + + GAVDF+ KP Sbjct: 59 MPVMNGLETLQRIMRDH---PVPVVMVSSTTTEGAENTIAAMQYGAVDFVAKP 108
>P30843:BASR_ECOLI Transcriptional regulatory protein basR/pmrA - Escherichia coli| Length = 222 Score = 42.4 bits (98), Expect = 0.011 Identities = 32/122 (26%), Positives = 57/122 (46%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 +++L+VE+D + + GY S A Q LE LV+ ++ +P Sbjct: 1 MKILIVEDDTLLLQGLILAAQTEGYACDSVTTARMAEQSLE--AGHYSLVVLDLGLPDED 58 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIW 907 G+ L++I +PV++++ D+++ L GA D+LVKP EL + + Sbjct: 59 GLHFLARIRQKKYT--LPVLILTARDTLTDKIAGLDVGADDYLVKPFALEELHARIRALL 116 Query: 908 RR 913 RR Sbjct: 117 RR 118
>P39048:PATA_ANASP Protein patA - Anabaena sp. (strain PCC 7120)| Length = 379 Score = 42.0 bits (97), Expect = 0.014 Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 1/122 (0%) Frame = +2 Query: 542 KTLRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPC 721 K + ++ + + ++ L + VI + L A +E + + D++L V MP Sbjct: 259 KIYTIFCIDENPIVLNNIKNFLDDQIFAVIGVTDSLKA--LMEILCTKPDIILINVDMPD 316 Query: 722 LSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNE-LKTLWQ 898 L G L S + HS K PVIM+++ + + A L KP + + LK +++ Sbjct: 317 LDGYELCSLLRKHSYFKNTPVIMVTEKAGLVDRARAKIVRASGHLTKPFNQGDLLKVIFK 376 Query: 899 HI 904 HI Sbjct: 377 HI 378
>Q4ZYD3:CHEB1_PSEU2 Chemotaxis response regulator protein-glutamate methylesterase 1 -| Pseudomonas syringae pv. syringae (strain B728a) Length = 358 Score = 42.0 bits (97), Expect = 0.014 Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 4/115 (3%) Frame = +2 Query: 533 LPVKTLRVLLVENDDCTRHVVRALLRKCG--YEVISAENGLDAWQYLEDVQNRIDLVLTE 706 +P K + VLLV++ R V+ A+L + + +A + + A L Q D+++ + Sbjct: 1 MPNKKISVLLVDDSAVVRQVLVAILNDTPDIHVMGAASDPIFAMSKL--AQEWPDVIVLD 58 Query: 707 VAMPCLSGIGLLSKITSHSICKGIPVIMMSK--NDSMSTVFKCLSKGAVDFLVKP 865 V MP + GI L KI S + PV++ S T + LS GAV+ + KP Sbjct: 59 VEMPRMDGITFLKKIMSE---RPTPVVICSSLTQKGAETSLQALSAGAVEIITKP 110
>P48359:YCF29_CYAPA Probable transcriptional regulator ycf29 - Cyanophora paradoxa| Length = 210 Score = 41.6 bits (96), Expect = 0.018 Identities = 25/122 (20%), Positives = 57/122 (46%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 + +L+++ D R+ ++ L + G+ V + AW L+ + +IDL++ ++ MP + Sbjct: 2 INILILDTDIGIRNSLKLYLTEIGFHVEESTCVDQAWDILK--RKKIDLIICDIIMPGMG 59 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIW 907 G L ++ ++ +PVI+++ G ++ KP EL + + + Sbjct: 60 GFNFLHQLRLNTDYCTLPVILLTTRGLTQDRIIGYKTGCDSYISKPFNIEELVVIIEGVL 119 Query: 908 RR 913 R Sbjct: 120 NR 121
>P22104:TCTD_SALTY Transcriptional regulatory protein tctD - Salmonella typhimurium| Length = 224 Score = 41.6 bits (96), Expect = 0.018 Identities = 30/122 (24%), Positives = 60/122 (49%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 727 +R+LL E++ H + L + G+ V +GL A L L + ++ MP + Sbjct: 1 MRLLLAEDNRELAHWLEKALVQNGFAVDCVFDGLAADHLLHS--EMYALAVLDINMPGMD 58 Query: 728 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIW 907 G+ ++ ++ + +PV++++ +++ K L+ GA D+L KP EL + + Sbjct: 59 GLEVVQRLRKRG--QTLPVLLLTARSAVADRVKGLNVGADDYLPKPFELEELDARLRALL 116 Query: 908 RR 913 RR Sbjct: 117 RR 118
>P52942:SP0F_BACTK Sporulation initiation phosphotransferase F - Bacillus| thuringiensis subsp. kurstaki Length = 122 Score = 41.6 bits (96), Expect = 0.018 Identities = 27/112 (24%), Positives = 56/112 (50%) Frame = +2 Query: 551 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 730 ++L+V++ R ++ + +K GY+ A NG A ++ ++ DLV+ ++ +P + G Sbjct: 4 KILIVDDQYGIRVLLHEVFQKEGYQTFQAANGFQALDIVK--KDNPDLVVLDMKIPGMDG 61 Query: 731 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 886 I + I + I VI+MS + + + GA+ KP +E++ Sbjct: 62 IEIFK--ACKEIDESIKVILMSAYGELDMIQEAKDLGALMHFAKPFDIDEIR 111
>Q4UL27:NTRXL_RICFE Putative response regulator ntrX-like - Rickettsia felis| (Rickettsia azadi) Length = 475 Score = 41.6 bits (96), Expect = 0.018 Identities = 29/117 (24%), Positives = 60/117 (51%), Gaps = 2/117 (1%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPC-- 721 L VL+V++++ R+++ A L+ G+ A N A + L + + V+ ++ + Sbjct: 4 LDVLIVDDEESIRNLIAANLKDEGFNPKVAANSTQALKILSE--KPVSAVILDIWLQGSE 61 Query: 722 LSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTL 892 + G+G+L I +PVI++S + ++ T + GA D++ KP ++L L Sbjct: 62 IDGLGILEIIKKRYPL--MPVIIISGHGTIETAVNAIKMGAYDYIEKPFNNDKLVIL 116
>Q9WYN9:CHEB_THEMA Chemotaxis response regulator protein-glutamate methylesterase -| Thermotoga maritima Length = 344 Score = 41.6 bits (96), Expect = 0.018 Identities = 30/110 (27%), Positives = 64/110 (58%), Gaps = 2/110 (1%) Frame = +2 Query: 542 KTLRVLLVENDDCTRHVVRALL-RKCGYEVIS-AENGLDAWQYLEDVQNRIDLVLTEVAM 715 + +RVL+V++ R V++ ++ + +V+ A++GL+A + + ++ + D++ ++ M Sbjct: 4 RVIRVLVVDDSAFMRMVLKDIIDSQPDMKVVGFAKDGLEAVE--KAIELKPDVITMDIEM 61 Query: 716 PCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKP 865 P L+GI L I + + I V +++ + T+ + L GAVDF+ KP Sbjct: 62 PNLNGIEALKLIMKKAPTRVIMVSSLTEEGAAITI-EALRNGAVDFITKP 110
>Q167K9:CHEB_ROSDO Chemotaxis response regulator protein-glutamate methylesterase -| Roseobacter denitrificans (strain ATCC 33942 / OCh 114) (Erythrobacter sp. (strain OCh 114)) (Roseobacter denitrificans) Length = 375 Score = 41.6 bits (96), Expect = 0.018 Identities = 31/113 (27%), Positives = 61/113 (53%), Gaps = 4/113 (3%) Frame = +2 Query: 539 VKTLRVLLVENDDCTRHVVRALLRKCG-YEVIS-AENGLDAWQYLEDVQNRIDLVLTEVA 712 V +VL+V++ R +R +L EV+ A + ++A Y+ N D++ ++ Sbjct: 12 VPAKKVLIVDDSRVIRMWLRTVLASDRRLEVVGEASDAVEARDYIR--ANPADVITLDIE 69 Query: 713 MPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMST--VFKCLSKGAVDFLVKP 865 MP +SG+ L+++ + +PV+M+S S + + LS+GA+D ++KP Sbjct: 70 MPGMSGLEFLTRLMR---ARPMPVVMLSSLTSKGSDAAVQALSRGAIDCILKP 119
>Q9KS59:CHEB3_VIBCH Chemotaxis response regulator protein-glutamate methylesterase of| group 3 operon - Vibrio cholerae Length = 358 Score = 41.6 bits (96), Expect = 0.018 Identities = 28/109 (25%), Positives = 60/109 (55%), Gaps = 3/109 (2%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALLRKC-GYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCL 724 +++L+V++ R + +L+ E+ +A +G+DA + Q D++ ++ MP + Sbjct: 1 MKILVVDDSALMRTTISDILQNIPNAEIKTARDGMDAIDKVMKWQP--DVMTLDINMPNM 58 Query: 725 SGIGLLSKITSHSICKGIPVIMMSK--NDSMSTVFKCLSKGAVDFLVKP 865 G+ L++I + + +P++M+S ++ T + L GAVDF+ KP Sbjct: 59 DGLTCLTQIM---VERPLPIVMLSSLTHEGAITTLEALYLGAVDFVAKP 104
>Q5GYV8:CHEB2_XANOR Chemotaxis response regulator protein-glutamate methylesterase 2 -| Xanthomonas oryzae pv. oryzae Length = 358 Score = 41.6 bits (96), Expect = 0.018 Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 4/110 (3%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALL-RKCGYEVI-SAENGLDAWQYLEDVQNRIDLVLTEVAMPC 721 +RVL+V++ R ++ +L R G EV+ SA + L A + ++ + D++ +V MP Sbjct: 7 VRVLIVDDSAVVRQMLTEILSRDAGIEVVGSAADPLLAREKIKRLNP--DVITLDVEMPR 64 Query: 722 LSGIGLLSKITSHSICKGIPVIMMSK--NDSMSTVFKCLSKGAVDFLVKP 865 + G+ L + + PV+M+S T + LS GAVDF+ KP Sbjct: 65 MDGLVFLENLMR---LRPTPVVMISSLTERGADTTLQALSLGAVDFVSKP 111
>Q2P1V8:CHEB2_XANOM Chemotaxis response regulator protein-glutamate methylesterase 2 -| Xanthomonas oryzae pv. oryzae (strain MAFF 311018) Length = 358 Score = 41.6 bits (96), Expect = 0.018 Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 4/110 (3%) Frame = +2 Query: 548 LRVLLVENDDCTRHVVRALL-RKCGYEVI-SAENGLDAWQYLEDVQNRIDLVLTEVAMPC 721 +RVL+V++ R ++ +L R G EV+ SA + L A + ++ + D++ +V MP Sbjct: 7 VRVLIVDDSAVVRQMLTEILSRDAGIEVVGSAADPLLAREKIKRLNP--DVITLDVEMPR 64 Query: 722 LSGIGLLSKITSHSICKGIPVIMMSK--NDSMSTVFKCLSKGAVDFLVKP 865 + G+ L + + PV+M+S T + LS GAVDF+ KP Sbjct: 65 MDGLVFLENLMR---LRPTPVVMISSLTERGADTTLQALSLGAVDFVSKP 111 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 447,031,796 Number of extensions: 9247893 Number of successful extensions: 28532 Number of sequences better than 10.0: 428 Number of HSP's gapped: 28338 Number of HSP's successfully gapped: 440 Length of query: 920 Length of database: 100,686,439 Length adjustment: 123 Effective length of query: 797 Effective length of database: 66,948,154 Effective search space: 53357678738 Effective search space used: 53357678738 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
