ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf157e15 |
|---|---|
| Clone Library Name | barley_pub |
>Q43125:CRY1_ARATH Cryptochrome-1 - Arabidopsis thaliana (Mouse-ear cress)| Length = 681 Score = 706 bits (1822), Expect = 0.0 Identities = 351/548 (64%), Positives = 420/548 (76%), Gaps = 6/548 (1%) Frame = +3 Query: 3 EVLDDHGSPFTMFTSFWNKCLCM-VDPPAPMLPPKRINSGDLTRCSSDDLIFEDDSERGS 179 EV D+ G PF+MF +FW +CL M DP +P+LPPK+I SGD+++C +D L+FEDDSE+GS Sbjct: 146 EVTDELGRPFSMFAAFWERCLSMPYDPESPLLPPKKIISGDVSKCVADPLVFEDDSEKGS 205 Query: 180 NALLARAWSPGWQNADKAFTAFINGPLIDYSVNRKKADSANTSLLSPYLHFGELSVRKVF 359 NALLARAWSPGW N DKA T FINGPL++YS NR+KADSA TS LSP+LHFGE+SVRKVF Sbjct: 206 NALLARAWSPGWSNGDKALTTFINGPLLEYSKNRRKADSATTSFLSPHLHFGEVSVRKVF 265 Query: 360 HQVRMKQLTWSNESNRDGEEGCSLFLRSIGLREYSRYLAFNHPCSHEKPLLAHLRFFPWV 539 H VR+KQ+ W+NE N GEE +LFL+SIGLREYSRY++FNHP SHE+PLL HL+FFPW Sbjct: 266 HLVRIKQVAWANEGNEAGEESVNLFLKSIGLREYSRYISFNHPYSHERPLLGHLKFFPWA 325 Query: 540 VNEVYFKVWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFW 719 V+E YFK WRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFW Sbjct: 326 VDENYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFW 385 Query: 720 DTLLDADLESDALGWQYISGSLPDGRELDRIDNPQFEGYKFDPYGEYVRRWLPELARLPT 899 DTLLDADLESDALGWQYI+G+LPD RE DRIDNPQFEGYKFDP GEYVRRWLPEL+RLPT Sbjct: 386 DTLLDADLESDALGWQYITGTLPDSREFDRIDNPQFEGYKFDPNGEYVRRWLPELSRLPT 445 Query: 900 EWIHHPWDAPESVLQAAGIELGSNYPLPIVELDEAKSRLQDALSEMWELEAASRAEIENG 1079 +WIHHPW+APESVLQAAGIELGSNYPLPIV LDEAK+RL +ALS+MW+LEAASRA IENG Sbjct: 446 DWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDEAKARLHEALSQMWQLEAASRAAIENG 505 Query: 1080 MEEGLGDSS--DEPPIAFPQELQHMEVDRATSHXXXXXXXXXXXXDQMVPSITSSLVRAE 1253 EEGLGDS+ +E PI FP+++ E + + DQMVPSITSSL+R E Sbjct: 506 SEEGLGDSAEVEEAPIEFPRDITMEETEPTRLN------PNRRYEDQMVPSITSSLIRPE 559 Query: 1254 TETELSAVFESEV--SRPEVPSQVHFQAQPRMESREQVASDGTAARYNQQYTLHRVQGGG 1427 + E S + V SR EVP + Q + E ++ TA ++ + R+ Sbjct: 560 EDEESSLNLRNSVGDSRAEVPRNMVNTNQAQQRRAEPASNQVTA--MIPEFNI-RIVAES 616 Query: 1428 IAPSTSEASSSW-TGREGGVVPVWSPPAASGHSDPYAADETDISSRSYLDRNPQSHNRLM 1604 ST+E+SSS R GG+VP WSP G+S+ + ++E I S Q+H+ ++ Sbjct: 617 TEDSTAESSSSGRRERSGGIVPEWSP----GYSEQFPSEENRIGGGSTTSSYLQNHHEIL 672 Query: 1605 NWNQLSQS 1628 NW +LSQ+ Sbjct: 673 NWRRLSQT 680
>Q96524:CRY2_ARATH Cryptochrome-2 - Arabidopsis thaliana (Mouse-ear cress)| Length = 612 Score = 473 bits (1218), Expect = e-133 Identities = 228/380 (60%), Positives = 276/380 (72%), Gaps = 8/380 (2%) Frame = +3 Query: 3 EVLDDHGSPFTMFTSFWNKCLCM-----VDPPAPMLPPKRINSGDLTRCSSDDLIFEDDS 167 E+ + G PFT F S+W KCL M + PP L P + + CS ++L E+++ Sbjct: 139 EIYCEKGKPFTSFNSYWKKCLDMSIESVMLPPPWRLMPITAAAEAIWACSIEELGLENEA 198 Query: 168 ERGSNALLARAWSPGWQNADKAFTAFINGPLIDYSVNRKKADSANTSLLSPYLHFGELSV 347 E+ SNALL RAWSPGW NADK FI LIDY+ N KK +TSLLSPYLHFGE+SV Sbjct: 199 EKPSNALLTRAWSPGWSNADKLLNEFIEKQLIDYAKNSKKVVGNSTSLLSPYLHFGEISV 258 Query: 348 RKVFHQVRMKQLTWSNESNRDGEEGCSLFLRSIGLREYSRYLAFNHPCSHEKPLLAHLRF 527 R VF RMKQ+ W+ + N +GEE LFLR IGLREYSRY+ FN P +HE+ LL+HLRF Sbjct: 259 RHVFQCARMKQIIWARDKNSEGEESADLFLRGIGLREYSRYICFNFPFTHEQSLLSHLRF 318 Query: 528 FPWVVNEVYFKVWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGM 707 FPW + FK WRQGRTGYPLVDAGMRELWATGW+H+RIRV+VSSF VK L LPW+WGM Sbjct: 319 FPWDADVDKFKAWRQGRTGYPLVDAGMRELWATGWMHNRIRVIVSSFAVKFLLLPWKWGM 378 Query: 708 KYFWDTLLDADLESDALGWQYISGSLPDGRELDRIDNPQFEGYKFDPYGEYVRRWLPELA 887 KYFWDTLLDADLE D LGWQYISGS+PDG ELDR+DNP +G K+DP GEY+R+WLPELA Sbjct: 379 KYFWDTLLDADLECDILGWQYISGSIPDGHELDRLDNPALQGAKYDPEGEYIRQWLPELA 438 Query: 888 RLPTEWIHHPWDAPESVLQAAGIELGSNYPLPIVELDEAKSRLQDALSEMWELE---AAS 1058 RLPTEWIHHPWDAP +VL+A+G+ELG+NY PIV++D A+ L A+S E + A+ Sbjct: 439 RLPTEWIHHPWDAPLTVLKASGVELGTNYAKPIVDIDTARELLAKAISRTREAQIMIGAA 498 Query: 1059 RAEIENGMEEGLGDSSDEPP 1118 EI E LG ++ + P Sbjct: 499 PDEIVADSFEALGANTIKEP 518
>P40115:PHR1_SINAL Deoxyribodipyrimidine photo-lyase - Sinapis alba (White mustard)| (Brassica hirta) Length = 501 Score = 446 bits (1147), Expect = e-124 Identities = 210/335 (62%), Positives = 253/335 (75%), Gaps = 4/335 (1%) Frame = +3 Query: 57 KCLCMVDPPAPMLPPKRIN----SGDLTRCSSDDLIFEDDSERGSNALLARAWSPGWQNA 224 KCL M + PP R+ + + CS ++L E+++E+ SNALL RAWSPGW NA Sbjct: 157 KCLDMSVESVVLPPPWRLMPLSAAETVWACSVEELGLENEAEKPSNALLTRAWSPGWSNA 216 Query: 225 DKAFTAFINGPLIDYSVNRKKADSANTSLLSPYLHFGELSVRKVFHQVRMKQLTWSNESN 404 DK FI LIDY+ N KK +TSLLSPYLHFGE+SVR+VF RMKQ+ W+ + N Sbjct: 217 DKILNEFIEKQLIDYAKNSKKVVGNSTSLLSPYLHFGEISVRRVFQCARMKQIIWARDKN 276 Query: 405 RDGEEGCSLFLRSIGLREYSRYLAFNHPCSHEKPLLAHLRFFPWVVNEVYFKVWRQGRTG 584 +GEE LFLR IGLR+YSR + FN P +HE+ LL+HLRFFPW + FK WRQGRTG Sbjct: 277 GEGEESADLFLRGIGLRDYSRIICFNFPFTHEQSLLSHLRFFPWDADVDKFKAWRQGRTG 336 Query: 585 YPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGW 764 YPLVDAGMRELWATGW+H+RIRV+VSSF VK L LPW+WGMKYFWDTLLDADLE D +GW Sbjct: 337 YPLVDAGMRELWATGWMHNRIRVIVSSFAVKFLLLPWKWGMKYFWDTLLDADLECDIIGW 396 Query: 765 QYISGSLPDGRELDRIDNPQFEGYKFDPYGEYVRRWLPELARLPTEWIHHPWDAPESVLQ 944 QYISGSLPDG ELDR+DNP +G K+DP GEY+R+WLPELARLPTEWIHHPWDAP +VL+ Sbjct: 397 QYISGSLPDGHELDRLDNPAIQGAKYDPEGEYIRQWLPELARLPTEWIHHPWDAPLTVLK 456 Query: 945 AAGIELGSNYPLPIVELDEAKSRLQDALSEMWELE 1049 A+G+ELG+NY PIV +D A+ L A+S E + Sbjct: 457 ASGVELGTNYAKPIVVIDTARELLTKAISRTREAQ 491
>Q55081:PHR_SYNY3 Deoxyribodipyrimidine photo-lyase - Synechocystis sp. (strain PCC| 6803) Length = 488 Score = 182 bits (462), Expect = 4e-45 Identities = 115/336 (34%), Positives = 171/336 (50%), Gaps = 6/336 (1%) Frame = +3 Query: 3 EVLDDHGSPFTMFTSFWNKCLCMVDPPAPMLPPKRINSGDLTRCSSDDLIFEDDSERGSN 182 EVL GSP+T++T FW K + +P+ PK + LT + L + Sbjct: 151 EVLTQAGSPYTVYTPFW-KNWSQLPKTSPVPTPKDLQG--LTPAEKEKLAPLEPLAIPQL 207 Query: 183 ALLARAW------SPGWQNADKAFTAFINGPLIDYSVNRKKADSANTSLLSPYLHFGELS 344 A L W +PG + A++ F+ L +Y NR TS LS L FG +S Sbjct: 208 ADLGFIWDQPLPLTPGEEAAEQRLDWFVAHGLEEYQQNRNFPALDGTSQLSAALKFGVIS 267 Query: 345 VRKVFHQVRMKQLTWSNESNRDGEEGCSLFLRSIGLREYSRYLAFNHPCSHEKPLLAHLR 524 R ++ Q ++ W + + + + + RE+ ++ ++ P + P + + Sbjct: 268 PRTLW-QTTLE--AWEQSRSEEARASIETWQQELAWREFYQHCLYSFPALAQGPYRSPFQ 324 Query: 525 FFPWVVNEVYFKVWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWG 704 FPW N+ +F+ W +GRTGYP++DA M +L TGW+H+R R++V+SF +K L L W+WG Sbjct: 325 EFPWEENQDHFQAWCEGRTGYPIIDAAMAQLNQTGWMHNRCRMIVASFLIKDLILNWQWG 384 Query: 705 MKYFWDTLLDADLESDALGWQYISGSLPDGRELDRIDNPQFEGYKFDPYGEYVRRWLPEL 884 YF TL D DL ++ GWQ+ + S D + L RI NP + KFDP GEY+R WLP+L Sbjct: 385 ELYFMQTLYDGDLAANNGGWQWSASSGMDPKPL-RIFNPHTQAQKFDPEGEYIRTWLPQL 443 Query: 885 ARLPTEWIHHPWDAPESVLQAAGIELGSNYPLPIVE 992 AR T D L G NYP PIV+ Sbjct: 444 ARFDT------GDLLTGKL-TPGSRRSVNYPEPIVD 472
>P12768:PHR_STRGR Deoxyribodipyrimidine photo-lyase - Streptomyces griseus| Length = 455 Score = 171 bits (434), Expect = 8e-42 Identities = 98/276 (35%), Positives = 149/276 (53%), Gaps = 4/276 (1%) Frame = +3 Query: 210 GWQNADKAFTAFINGPLIDYSVNRKKADSANTSLLSPYLHFGELSVRKVFHQVRMKQLTW 389 G + K T+++NGP+ DY TS LSP+LHFG +S ++ H+ R K Sbjct: 200 GEEAGRKLVTSWLNGPMADYEDGHDDLAGDATSRLSPHLHFGTVSAAELVHRAREK---- 255 Query: 390 SNESNRDGEEGCSLFLRSIGLREYSRYLAFNHPCSHEKPLLAHLRFFP----WVVNEVYF 557 G G F+R + R+ F+H ++P + + P W + Sbjct: 256 -------GGLGGEAFVRQLAWRD------FHHQVLADRPDASWSDYRPRHDRWRSDADEM 302 Query: 558 KVWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDA 737 W+ G TGYPLVDA MR+L GW+H+R R++ +SF K L + WR G ++F D L+D Sbjct: 303 HAWKSGLTGYPLVDAAMRQLAHEGWMHNRARMLAASFLTKTLYVDWREGARHFLDLLVDG 362 Query: 738 DLESDALGWQYISGSLPDGRELDRIDNPQFEGYKFDPYGEYVRRWLPELARLPTEWIHHP 917 D+ ++ L WQ+++G+ D R +R+ NP +G +FD G+YVR W+PELA + IH P Sbjct: 363 DVANNQLNWQWVAGTGTDTRP-NRVLNPVIQGKRFDARGDYVRGWVPELAEVEGSAIHEP 421 Query: 918 WDAPESVLQAAGIELGSNYPLPIVELDEAKSRLQDA 1025 W L AG++ YP P+V+L EA++R + A Sbjct: 422 WKL--QGLDRAGLD----YPDPVVDLAEARARFERA 451
>P00914:PHR_ECOLI Deoxyribodipyrimidine photo-lyase - Escherichia coli| Length = 472 Score = 171 bits (433), Expect = 1e-41 Identities = 98/250 (39%), Positives = 142/250 (56%), Gaps = 2/250 (0%) Frame = +3 Query: 264 DYSVNRKKADSANTSLLSPYLHFGELSVRKVFHQVRMKQLTWSNESNRDGEEGCSLFLRS 443 +Y R TS LS L G LS R+ H++ +Q DG G S++L Sbjct: 222 EYEQQRDFPAVEGTSRLSASLATGGLSPRQCLHRLLAEQ-----PQALDGGAG-SVWLNE 275 Query: 444 IGLREYSRYLAFNHP--CSHEKPLLAHLRFFPWVVNEVYFKVWRQGRTGYPLVDAGMREL 617 + RE+ R+L HP C H +P +A W N + + W++G+TGYP+VDA MR+L Sbjct: 276 LIWREFYRHLITYHPSLCKH-RPFIAWTDRVQWQSNPAHLQAWQEGKTGYPIVDAAMRQL 334 Query: 618 WATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGSLPDGR 797 +TGW+H+R+R++ +SF VK L + WR G +YF L+D DL ++ GWQ+ + + D Sbjct: 335 NSTGWMHNRLRMITASFLVKDLLIDWREGERYFMSQLIDGDLAANNGGWQWAASTGTDAA 394 Query: 798 ELDRIDNPQFEGYKFDPYGEYVRRWLPELARLPTEWIHHPWDAPESVLQAAGIELGSNYP 977 RI NP +G KFD GE++R+WLPEL +P + +H PW Q AG+ L +YP Sbjct: 395 PYFRIFNPTTQGEKFDHEGEFIRQWLPELRDVPGKVVHEPW----KWAQKAGVTL--DYP 448 Query: 978 LPIVELDEAK 1007 PIVE EA+ Sbjct: 449 QPIVEHKEAR 458
>P25078:PHR_SALTY Deoxyribodipyrimidine photo-lyase - Salmonella typhimurium| Length = 473 Score = 171 bits (432), Expect = 1e-41 Identities = 115/334 (34%), Positives = 171/334 (51%), Gaps = 8/334 (2%) Frame = +3 Query: 30 FTMFTSFWNKCLCMVDPPAPMLPPKRINSGDLTRCSSDDLIFEDDSERGS------NALL 191 FT F + W K L PP P R++ T + L + + + NA++ Sbjct: 151 FTPFKNAWLKRLKEDIPPCVPAPKIRVSGALSTPLTPVSLNYPQQAFDAALFPVEENAVI 210 Query: 192 ARAWSPGWQNADKAFTAFINGPLIDYSVNRKKADSANTSLLSPYLHFGELSVRKVFHQVR 371 A+ Q AD +Y++ R TS LS L G LS R+ H++ Sbjct: 211 AQLRQFCAQGAD------------EYALRRDFPAVDGTSRLSASLATGGLSPRQCLHRLL 258 Query: 372 MKQLTWSNESNRDGEEGCSLFLRSIGLREYSRYLAFNHP--CSHEKPLLAHLRFFPWVVN 545 +Q DG G S++L + RE+ R+L +P C H+ P + + W N Sbjct: 259 AEQ-----PQALDGGPG-SVWLNELIWREFYRHLMTWYPALCKHQ-PFIRWTKRVAWQEN 311 Query: 546 EVYFKVWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDT 725 YF+ W++G TGYP+VDA MR+L ATGW+H+R+R++ +SF VK L + WR G +YF Sbjct: 312 PHYFQAWQKGETGYPIVDAAMRQLNATGWMHNRLRMITASFLVKDLLIDWRLGERYFMSQ 371 Query: 726 LLDADLESDALGWQYISGSLPDGRELDRIDNPQFEGYKFDPYGEYVRRWLPELARLPTEW 905 L+D DL ++ GWQ+ + + D RI NP +G +FD GE++R+WLP L +P + Sbjct: 372 LIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDRDGEFIRQWLPALRDIPGKA 431 Query: 906 IHHPWDAPESVLQAAGIELGSNYPLPIVELDEAK 1007 IH PW E AG+ L +YP PIVE +A+ Sbjct: 432 IHEPWRWAEK----AGVVL--DYPRPIVEHKQAR 459
>Q9KNA8:PHR_VIBCH Deoxyribodipyrimidine photo-lyase - Vibrio cholerae| Length = 469 Score = 167 bits (423), Expect = 1e-40 Identities = 101/317 (31%), Positives = 161/317 (50%), Gaps = 7/317 (2%) Frame = +3 Query: 21 GSPFTMFTSFWNKCLCMVDPPAPMLPPKRINSGDLTRCSSDDLIFEDDSERGSNALLARA 200 G F +FT F L + PP ++ R + + +L++ + + + Sbjct: 144 GEFFKVFTPFKRAWLTLFQPP--VIGKNRPVALWNVPSALAELVWHPEQAFDYPRIDSTP 201 Query: 201 WSPGWQNADKAFTAFINGPLIDYSVNRKKADSANTSLLSPYLHFGELSVR----KVFHQV 368 W+ ++ F + DY R TS LSPYL G LS R +++H+ Sbjct: 202 WAADFETVRAQLRDFCRERVQDYHQARDFPAREGTSSLSPYLAIGVLSARQCVARLYHES 261 Query: 369 RMKQLTWSNESNRDGEEGCSLFLRSIGLREYSRYLAFNHP-CSHEKPLLAHLRFFPWVVN 545 M +L+ EG ++L + RE+ ++L P S + + W + Sbjct: 262 SMGELS----------EGAQVWLSELIWREFYQHLVAIEPNLSKSRDFVEWGARLEWWND 311 Query: 546 EVYFKVWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDT 725 F++W +G+TGYP+VDA MR+L TGW+H+R+R++V+SF K L + WRWG +YF Sbjct: 312 NEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASFLTKDLHIDWRWGERYFMSR 371 Query: 726 LLDADLESDALGWQYISGSLPDGRELDRIDNPQFEGYKFDPYGEYVRRWLPELARLPTEW 905 L+D D ++ GWQ+ + + DG+ RI NP +G KFDP G+++RRW+PEL + + + Sbjct: 372 LIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFDPNGDFIRRWVPELRSVSSAY 431 Query: 906 IHHPWDAP--ESVLQAA 950 IH PW P SVL A Sbjct: 432 IHQPWTYPAVNSVLYPA 448
>Q04449:PHR_BACPF Deoxyribodipyrimidine photo-lyase - Bacillus pseudofirmus| Length = 339 Score = 166 bits (419), Expect = 4e-40 Identities = 104/342 (30%), Positives = 170/342 (49%), Gaps = 5/342 (1%) Frame = +3 Query: 3 EVLDDHGSPFTMFTSFWNKCLCMVDPPAPMLPPKRINSGDLTRCSSDDLIFEDDSERGSN 182 +VL G+P+ +FT ++ K P + + + G + + ++ D ++E N Sbjct: 2 QVLKKDGTPYKVFTPYY-KAWAKERKRTPAVIKRDVLLGSVHKGTAPDR----EAETLFN 56 Query: 183 ALLARA---WSP-GWQNADKAFTAFINGPLIDYSVNRKKADSANTSLLSPYLHFGELSVR 350 L+ + WS G ++A K F L Y NR TS LSPY+ G +S R Sbjct: 57 NLIKKCSYDWSAIGEEHAIKRLQMFTKKRLSGYKANRDFPSITGTSRLSPYIKTGAVSSR 116 Query: 351 KVFHQVRMKQL-TWSNESNRDGEEGCSLFLRSIGLREYSRYLAFNHPCSHEKPLLAHLRF 527 +++ + + ++S E+ FL+ + R++ R + F P ++ ++ R Sbjct: 117 SIYYHILNAEADSYSAET----------FLKELAWRDFYRMVHFYEPDCKDREIMEGYRE 166 Query: 528 FPWVVNEVYFKVWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGM 707 W ++ W++G TG+P+VDAGMR+L GW+H+R+R++ +SF K L + WR G Sbjct: 167 LNWSHDQDDLTSWKRGETGFPIVDAGMRQLLNEGWMHNRLRMITASFLTKDLLIDWRLGE 226 Query: 708 KYFWDTLLDADLESDALGWQYISGSLPDGRELDRIDNPQFEGYKFDPYGEYVRRWLPELA 887 +YF L+D D S+ GWQ+ + D RI NP + +FD G Y+R ++PEL Sbjct: 227 RYFERMLIDYDPSSNIGGWQWAASVGTDAVPYFRIFNPVTQSKRFDENGTYIRTYIPELN 286 Query: 888 RLPTEWIHHPWDAPESVLQAAGIELGSNYPLPIVELDEAKSR 1013 +P +IH PW E L +YPLPIV D +K R Sbjct: 287 HVPDHYIHEPWKMSEEEQVKYKCRLDEDYPLPIV--DHSKQR 326
>P27526:PHR_NEUCR Deoxyribodipyrimidine photo-lyase - Neurospora crassa| Length = 642 Score = 154 bits (388), Expect = 2e-36 Identities = 100/331 (30%), Positives = 154/331 (46%), Gaps = 8/331 (2%) Frame = +3 Query: 57 KCLCMVDPPAPMLPPKRINSGDLTRCSSDDLIFEDDSERGSNALLARAWSPGWQNADKAF 236 +CL + + P P P + +L CS + A W G A K Sbjct: 309 ECLEIYEKPGPNPPGTKEKHENLFACSIPEAPEGKRLRDDEKARYHSLWPAGEHEALKRL 368 Query: 237 TAFINGPLIDYSVNRKKADSANTSLLSPYLHFGELSVRKVFHQVRMKQLTWSNESNRDGE 416 F + + Y+ R TS LS + G LS R R + T + G Sbjct: 369 EKFCDEAIGKYAERRNIPAMQGTSNLSVHFASGTLSARTAIRTARDRNNT---KKLNGGN 425 Query: 417 EGCSLFLRSIGLREYSRYLAFNHP--CSHEKPLLAHLRFFPWVVNEVYFKVWRQGRTGYP 590 EG ++ + R++ +++ + P C + KP W N +F W QGRTG+P Sbjct: 426 EGIQRWISEVAWRDFYKHVLVHWPYVCMN-KPFKPTYSNIEWSYNVDHFHAWTQGRTGFP 484 Query: 591 LVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQY 770 ++DA MR++ +TG++H+R+R++V+SF K L + WR G +YF + L+D D S+ GW + Sbjct: 485 IIDAAMRQVLSTGYMHNRLRMIVASFLAKDLLVDWRMGERYFMEHLIDGDFASNNGGWGF 544 Query: 771 ISGSLPDGRELDRIDNPQFEGYKFDPYGEYVRRWLPELARLPT------EWIHHPWDAPE 932 + D + R+ NP + KFDP G+Y+R+W+ EL LP IH P+ Sbjct: 545 AASVGVDPQPYFRVFNPLLQSEKFDPDGDYIRKWVEELRDLPELKGGKGGEIHDPYGRGS 604 Query: 933 SVLQAAGIELGSNYPLPIVELDEAKSRLQDA 1025 ++ E G YP PIVE A+ R DA Sbjct: 605 EKVKKKLEEKG--YPRPIVEHSGARDRALDA 633
>P05327:PHR_SYNP6 Deoxyribodipyrimidine photo-lyase - Synechococcus sp. (strain ATCC| 27144 / PCC 6301 / SAUG 1402/1) (Anacystis nidulans) Length = 484 Score = 152 bits (383), Expect = 6e-36 Identities = 101/361 (27%), Positives = 164/361 (45%), Gaps = 6/361 (1%) Frame = +3 Query: 3 EVLDDHGSPFTMFTSFWNKCLCMVDPPAPMLPPKRINSGDLTRCSSDDLIFEDDSERGSN 182 ++L G+P++++ FW P P + ++ + L+ SE + Sbjct: 137 QILSGSGNPYSVYGPFWKNWQAQPKPTPVATPTELVDLSPEQLTAIAPLLL---SELPTL 193 Query: 183 ALLARAWS------PGWQNADKAFTAFINGPLIDYSVNRKKADSANTSLLSPYLHFGELS 344 L W PG A F + + DY R A TS LSP L FG + Sbjct: 194 KQLGFDWDGGFPVEPGETAAIARLQEFCDRAIADYDPQRNFPAEAGTSGLSPALKFGAIG 253 Query: 345 VRKVFHQVRMKQLTWSNESNRDGEEGCSLFLRSIGLREYSRYLAFNHPCSHEKPLLAHLR 524 +R+ + R + + + ++ + + RE+ ++ ++ P + P + + Sbjct: 254 IRQAW---RAASAAHALSRSDEARNSIRVWQQELAWREFYQHALYHFPSLADGPYRSLWQ 310 Query: 525 FFPWVVNEVYFKVWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWG 704 FPW E F W Q +TGYP+VDA MR+L TGW+H+R ++V+SF K L + WR G Sbjct: 311 QFPWENREALFTAWTQAQTGYPIVDAAMRQLTETGWMHNRCWMIVASFLTKDLIIDWRRG 370 Query: 705 MKYFWDTLLDADLESDALGWQYISGSLPDGRELDRIDNPQFEGYKFDPYGEYVRRWLPEL 884 ++F L+D DL ++ GWQ+ + S D + L RI NP + KFD Y++RWLPEL Sbjct: 371 EQFFMQHLVDGDLAANNGGWQWSASSGMDPKPL-RIFNPASQAKKFDATATYIKRWLPEL 429 Query: 885 ARLPTEWIHHPWDAPESVLQAAGIELGSNYPLPIVELDEAKSRLQDALSEMWELEAASRA 1064 + HP D + G YP PIV + + + + +++ A A Sbjct: 430 RHV------HPKDLISGEITPIG---RRGYPAPIVNHNLRQKQFKALYNQLKAAIAEPEA 480 Query: 1065 E 1067 E Sbjct: 481 E 481
>P77967:CRYD_SYNY3 Cryptochrome DASH - Synechocystis sp. (strain PCC 6803)| Length = 489 Score = 147 bits (371), Expect = 2e-34 Identities = 88/252 (34%), Positives = 137/252 (54%), Gaps = 3/252 (1%) Frame = +3 Query: 258 LIDYSVNRKKADSAN-TSLLSPYLHFGELSVRKVFHQVRMKQLTWSNESNRDGEEGCSLF 434 L DY R A+ +S SP+L G LS R ++ +V+ E R + Sbjct: 233 LKDYKETRNGMVGADYSSKFSPWLALGCLSPRFIYQEVKRY------EQERVSNDSTHWL 286 Query: 435 LRSIGLREYSRYLA--FNHPCSHEKPLLAHLRFFPWVVNEVYFKVWRQGRTGYPLVDAGM 608 + + R++ R++A + + + LL + FPW ++V F++WR G+TGYPLVDA M Sbjct: 287 IFELLWRDFFRFVAQKYGNKLFNRGGLLN--KNFPWQEDQVRFELWRSGQTGYPLVDANM 344 Query: 609 RELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGSLP 788 REL TG++ +R R V+SF K L + WRWG ++F L+D D+ S+ W Y +G Sbjct: 345 RELNLTGFMSNRGRQNVASFLCKNLGIDWRWGAEWFESCLIDYDVCSNWGNWNYTAGIGN 404 Query: 789 DGRELDRIDNPQFEGYKFDPYGEYVRRWLPELARLPTEWIHHPWDAPESVLQAAGIELGS 968 D R+ + P+ + ++DP G Y+R WLPEL LP + IH PW + + G++LG Sbjct: 405 DARDFRYFNIPK-QSQQYDPQGTYLRHWLPELKNLPGDKIHQPWLLSATEQKQWGVQLGV 463 Query: 969 NYPLPIVELDEA 1004 +YP P V ++ Sbjct: 464 DYPRPCVNFHQS 475
>Q9HQ46:PHR_HALSA Deoxyribodipyrimidine photo-lyase - Halobacterium salinarium| (Halobacterium halobium) Length = 481 Score = 146 bits (369), Expect = 3e-34 Identities = 105/348 (30%), Positives = 165/348 (47%), Gaps = 5/348 (1%) Frame = +3 Query: 3 EVLDDHGSPFTMFTSFWNKCLCMV-DPPAPMLPPKRINSGDLTRCSSDDLIFEDDSERGS 179 E+ + G P++++T FW K +PPAP P + + D + L E G Sbjct: 141 EIRTNAGDPYSVYTYFWRKWQDREKNPPAPEPEPADL-AADTALADTSPL--PSVQELGF 197 Query: 180 NALLARAWSPGWQNADKAFTAFI-NGPLIDYSVNRKKADSANTSLLSPYLHFGELSVRKV 356 A G A AF +G + Y R TS LSP+L FG + +R V Sbjct: 198 AEPEAAVPDAGTAAARSLLDAFRESGDIYRYEDRRDYPHEEPTSRLSPHLKFGTIGIRTV 257 Query: 357 FHQVRMKQLTWSNESNRDGEEGCSLFLRSIGLRE-YSRYLAFNHPCSHEKPLLAHLRFFP 533 + R + S+ D E + F+ + RE Y++ L FN E A+ Sbjct: 258 YEAARAAK---SDADTDDERENVAAFIGQLAWREFYAQVLYFNQNVVSEN-FKAYEHPIE 313 Query: 534 WVVNEVYFKVWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKY 713 W + + W+ G TGYP+VDAGMR+L A ++H+R+R++V++F K L + WR G + Sbjct: 314 WRDDPAALQAWKDGETGYPIVDAGMRQLRAEAYMHNRVRMIVAAFLTKDLLVDWRAGYDW 373 Query: 714 FWDTLLDADLESDALGWQYISGSLPDGRELDRIDNPQFEGYKFDPYGEYVRRWLPELARL 893 F + L D D +D GWQ+ + + D + R+ NP +G ++DP +Y+ ++PEL + Sbjct: 374 FREKLADHDTANDNGGWQWAASTGTDAQPYFRVFNPMTQGERYDPDADYITEFVPELRDV 433 Query: 894 PTEWIH--HPWDAPESVLQAAGIELGSNYPLPIVELDEAKSRLQDALS 1031 P + IH H E A YP PIV+ + R +DA++ Sbjct: 434 PADAIHSWHELSLSERRRHA------PEYPDPIVDHSQ---RREDAIA 472
>P61496:PHR_THET2 Deoxyribodipyrimidine photo-lyase - Thermus thermophilus (strain HB27| / ATCC BAA-163 / DSM 7039) Length = 420 Score = 146 bits (368), Expect = 3e-34 Identities = 105/329 (31%), Positives = 150/329 (45%), Gaps = 1/329 (0%) Frame = +3 Query: 30 FTMFTSFWNKCLCMVDP-PAPMLPPKRINSGDLTRCSSDDLIFEDDSERGSNALLARAWS 206 + ++T F + L + P PAP PK G++ R ED Sbjct: 133 YRVYTPFARRFLGVEAPLPAPEALPKGPEEGEIPR--------EDPG--------LPLPE 176 Query: 207 PGWQNADKAFTAFINGPLIDYSVNRKKADSANTSLLSPYLHFGELSVRKVFHQVRMKQLT 386 PG + A AF+ L Y+ R + D S LSPY G LS R Sbjct: 177 PGEEAALAGLRAFLEAKLPRYAEERDRLDGEGGSRLSPYFALGVLSPRLA---------A 227 Query: 387 WSNESNRDGEEGCSLFLRSIGLREYSRYLAFNHPCSHEKPLLAHLRFFPWVVNEVYFKVW 566 W E+ R G EG ++ + R++S +L ++ P E+PL + PW +E F+ W Sbjct: 228 W--EAERRGGEGARKWVAELLWRDFSYHLLYHFPWMAERPLDPRFQALPWQEDEALFRAW 285 Query: 567 RQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLE 746 +GRTG PLVDA MREL ATG+L +R R+ + F VK L LPW+ + F LLD D Sbjct: 286 YEGRTGVPLVDAAMRELHATGFLSNRARMNAAQFAVKHLLLPWKRCEEAFRHLLLDGDRA 345 Query: 747 SDALGWQYISGSLPDGRELDRIDNPQFEGYKFDPYGEYVRRWLPELARLPTEWIHHPWDA 926 + GWQ+ G D R+ NP +G + DP G +++RW PE +P A Sbjct: 346 VNLQGWQWAGGLGVDAAPYFRVFNPVLQGERHDPEGRWLKRWAPE----------YPSYA 395 Query: 927 PESVLQAAGIELGSNYPLPIVELDEAKSR 1013 P+ P+V+L+EA+ R Sbjct: 396 PKD---------------PVVDLEEARRR 409
>P61497:PHR_THET8 Deoxyribodipyrimidine photo-lyase - Thermus thermophilus (strain HB8| / ATCC 27634 / DSM 579) Length = 420 Score = 145 bits (367), Expect = 5e-34 Identities = 92/269 (34%), Positives = 131/269 (48%) Frame = +3 Query: 207 PGWQNADKAFTAFINGPLIDYSVNRKKADSANTSLLSPYLHFGELSVRKVFHQVRMKQLT 386 PG + A AF+ L Y+ R + D S LSPY G LS R Sbjct: 177 PGEEAALAGLRAFLEAKLPRYAEERDRLDGEGGSRLSPYFALGVLSPRLA---------A 227 Query: 387 WSNESNRDGEEGCSLFLRSIGLREYSRYLAFNHPCSHEKPLLAHLRFFPWVVNEVYFKVW 566 W E+ R G EG ++ + R++S +L ++ P E+PL + FPW +E F+ W Sbjct: 228 W--EAERRGGEGARKWVAELLWRDFSYHLLYHFPWMAERPLDPRFQAFPWQEDEALFQAW 285 Query: 567 RQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLE 746 +G+TG PLVDA MREL ATG+L +R R+ + F VK L LPW+ + F LLD D Sbjct: 286 YEGKTGVPLVDAAMRELHATGFLSNRARMNAAQFAVKHLLLPWKRCEEAFRHLLLDGDRA 345 Query: 747 SDALGWQYISGSLPDGRELDRIDNPQFEGYKFDPYGEYVRRWLPELARLPTEWIHHPWDA 926 + GWQ+ G D R+ NP +G + DP G +++RW PE +P A Sbjct: 346 VNLQGWQWAGGLGVDAAPYFRVFNPVLQGERHDPEGRWLKRWAPE----------YPSYA 395 Query: 927 PESVLQAAGIELGSNYPLPIVELDEAKSR 1013 P+ P+V+L+EA+ R Sbjct: 396 PKD---------------PVVDLEEARRR 409
>Q7NMD1:CRYD_GLOVI Cryptochrome DASH - Gloeobacter violaceus| Length = 500 Score = 140 bits (352), Expect = 2e-32 Identities = 109/339 (32%), Positives = 162/339 (47%), Gaps = 15/339 (4%) Frame = +3 Query: 72 VDPPAPM---LPP-KRINSGDLTRCSSDDLIFEDDSER-------GSNALLARAWSPGWQ 218 ++PP P LPP ++ G++ + + L ER G + LAR WQ Sbjct: 168 INPPLPAPAKLPPLPAVDPGEIPQLADLGLESPVTDERAVLQFKGGETSGLARLEEYFWQ 227 Query: 219 NAD-KAFTAFINGPL-IDYSVNRKKADSANTSLLSPYLHFGELSVRKVFHQVRMKQLTWS 392 + K++ NG L DYS S S +L G LS R + QV+ + Sbjct: 228 KSLLKSYKQTRNGMLGADYS-----------SKFSAWLALGCLSARYIHEQVQ------T 270 Query: 393 NESNRDGEEGCSLFLRSIGLREYSRYLAFNHPCSHEKPLLAHLRFF--PWVVNEVYFKVW 566 E+ R + + + R+Y R++A H A LR PW + F++W Sbjct: 271 YETKRIKNDSTYWLIFELLWRDYFRFIAAKH--GDRLFYTAGLRGLDIPWKEDWERFELW 328 Query: 567 RQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLE 746 R G+TG+PLVDA MREL ATG++ +R R V+SF K L + W G ++F L+D D+ Sbjct: 329 RTGQTGFPLVDANMRELAATGFMSNRGRQNVASFLTKNLGIHWHMGAEWFESRLIDYDVA 388 Query: 747 SDALGWQYISGSLPDGRELDRIDNPQFEGYKFDPYGEYVRRWLPELARLPTEWIHHPWDA 926 S+ W Y +G D R R N + +DP G YV+ WLPELA LP +H PW Sbjct: 389 SNWGNWNYTAGVGNDARGF-RFFNILKQARDYDPDGAYVKHWLPELAGLPPARVHEPWKL 447 Query: 927 PESVLQAAGIELGSNYPLPIVELDEAKSRLQDALSEMWE 1043 + G+ LG +YP P+V+L ++ + + + WE Sbjct: 448 LPVEQKRFGVRLGVDYPQPVVDLFQSAAANEAIYNAAWE 486
>Q89AJ9:PHR_BUCBP Deoxyribodipyrimidine photo-lyase - Buchnera aphidicola subsp.| Baizongia pistaciae Length = 478 Score = 136 bits (343), Expect = 3e-31 Identities = 97/350 (27%), Positives = 163/350 (46%), Gaps = 14/350 (4%) Frame = +3 Query: 6 VLDDHGSPFTMFTSFWNKCLCMVDPPAPMLPPKRINSGDLTRCSSDDLI--FEDDSERGS 179 + + +G + F+ F KC+ + P PK N S D I F E+ Sbjct: 142 IKNSYGKMYKKFSYFKYKCIKQLQLNIPSCFPKPQNKNLHDHYSLDFTIPIFHTYLEKFD 201 Query: 180 NALLARAWSPGWQNADKAFTAFINGPLIDYSVNRKKADSANTSLLSPYLHFGELSVRK-- 353 A + G + FI Y+ +++ + +TS+LS +L G +S R+ Sbjct: 202 ----ANIFPIGEDIVYEKLKFFIKYAFNKYNFDQEIFELNSTSMLSAHLSIGVISPRQCV 257 Query: 354 ---------VFHQVRMKQLTWSNESNRDGEEGCSLFLRSIGLREYSRYLAFNHPCSHEKP 506 + H ++++ W NE + RE+ ++L + +P + Sbjct: 258 TLLFKEYPDIIH--KLEECKWINE---------------LLWREFYQHLLYFYPNIGQNQ 300 Query: 507 LLAHLRF-FPWVVNEVYFKVWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVL 683 L H W N Y +W+QG TGYP++DAGMR+L GW+ +R+R++ +SF VK L Sbjct: 301 SLYHWENRIKWDNNLYYLNLWKQGNTGYPIIDAGMRQLKQLGWISNRLRMITASFLVKNL 360 Query: 684 QLPWRWGMKYFWDTLLDADLESDALGWQYISGSLPDGRELDRIDNPQFEGYKFDPYGEYV 863 + WR G +YF L+D D S+ WQ+I+ D RI NP + KFD +++ Sbjct: 361 LIDWRKGEEYFMSQLIDGDFASNNGNWQWIASVGTDSMPYFRIFNPMLQSKKFDINAKFI 420 Query: 864 RRWLPELARLPTEWIHHPWDAPESVLQAAGIELGSNYPLPIVELDEAKSR 1013 R+++PEL+ + T IH+P D ++ ++ S YP PI+ +K + Sbjct: 421 RKYIPELSNVSTYNIHNPCDNNKT------NKIHSKYPQPIINYYHSKKK 464
>Q3IPX9:CRYD_NATPD Cryptochrome DASH - Natronomonas pharaonis (strain DSM 2160 / ATCC| 35678) Length = 474 Score = 134 bits (336), Expect = 2e-30 Identities = 84/248 (33%), Positives = 122/248 (49%), Gaps = 1/248 (0%) Frame = +3 Query: 258 LIDYSVNRKKADSAN-TSLLSPYLHFGELSVRKVFHQVRMKQLTWSNESNRDGEEGCSLF 434 L +Y R A+ +S SP+L G LS R + +V E R E Sbjct: 229 LREYKTTRNGLLGADYSSKFSPWLAAGCLSPRWLHREVERY------EDERVANEDTYWL 282 Query: 435 LRSIGLREYSRYLAFNHPCSHEKPLLAHLRFFPWVVNEVYFKVWRQGRTGYPLVDAGMRE 614 + + R++ ++ + + KP R W + F+ W G TG P VDA MRE Sbjct: 283 VFELAWRDFFQFQFEKYGATFFKPGGIRERNIDWDRDRALFERWADGETGVPFVDANMRE 342 Query: 615 LWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGSLPDG 794 L TG++ +R R V+SF VL + WRWG YF L+D D+ S+ W Y +G D Sbjct: 343 LNRTGYMSNRGRQNVASFLAGVLGIDWRWGAAYFEARLIDYDVASNWGNWAYQAGVGNDS 402 Query: 795 RELDRIDNPQFEGYKFDPYGEYVRRWLPELARLPTEWIHHPWDAPESVLQAAGIELGSNY 974 R DR + + + ++D EY+ WLPELA LP H PW E+ + G+ELG +Y Sbjct: 403 R--DRYFDVRSQAERYDSDAEYITTWLPELAALPATIAHQPWQLSEAEQREYGVELGVDY 460 Query: 975 PLPIVELD 998 P P+V++D Sbjct: 461 PEPVVDID 468
>Q7UJB1:CRYD_RHOBA Cryptochrome DASH - Rhodopirellula baltica| Length = 488 Score = 131 bits (329), Expect = 1e-29 Identities = 102/312 (32%), Positives = 138/312 (44%), Gaps = 9/312 (2%) Frame = +3 Query: 99 PKRINSGDLTRCSSDDLIFEDDSER-------GSNALLARAWSPGWQNADKAFTAFINGP 257 P+ +N+GD+ S L +R G NA R W N D+ Sbjct: 180 PEEVNAGDIPTLESLGLSTPPLDDRCLNQFTGGQNAAQQRMEEYIW-NEDR--------- 229 Query: 258 LIDYSVNRKKADSAN-TSLLSPYLHFGELSVRKVFHQVRMKQLTWSNESNRDGEEGCSLF 434 L Y R N +S SP+L G LS R + VR E R + Sbjct: 230 LRVYKETRNGMLHPNDSSKFSPWLAQGCLSPRMIADHVRRY------EEERVKNKSTYWM 283 Query: 435 LRSIGLREYSRYLAFNHPCSHEKPLLAHLRFFPWVVNEVYFKVWRQGRTGYPLVDAGMRE 614 + + R+Y R+++ H + + W + F+ W+ G TGYPLVDA MRE Sbjct: 284 IFELLWRDYFRWISRKHGATLFRAGGLRGVNVDWKSDRELFRRWQDGTTGYPLVDANMRE 343 Query: 615 LWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGSLPDG 794 L TG++ +R R V+SF K L + WRWG ++F L+D D+ S+ W Y +G D Sbjct: 344 LRTTGYMSNRGRQNVASFLTKNLGIDWRWGARWFESQLVDYDVASNYGNWNYAAGVGNDA 403 Query: 795 RELDRIDNPQFEGYKFDPYGEYVRRWLPELARLPTEWIHHPWDAPESVLQAAGIELGSNY 974 R R N + +D GEY + WLPEL L IH PW Q G LG Y Sbjct: 404 RGF-RFFNITKQSRDYDSQGEYAKHWLPELRDLDVTEIHEPWKMSPERQQEVGATLGKEY 462 Query: 975 PLPIVEL-DEAK 1007 P PIV+L D AK Sbjct: 463 PHPIVDLFDSAK 474
>P57386:PHR_BUCAI Deoxyribodipyrimidine photo-lyase - Buchnera aphidicola subsp.| Acyrthosiphon pisum (Acyrthosiphon pisum symbiotic bacterium) Length = 483 Score = 130 bits (327), Expect = 2e-29 Identities = 81/251 (32%), Positives = 126/251 (50%), Gaps = 3/251 (1%) Frame = +3 Query: 264 DYSVNRKKADSANTSLLSPYLHFGELSVRKVFHQVRMKQLTWSNESNRDGEEGCSLFLRS 443 DY + R TS+LSPYL G +S R +K L + S S + Sbjct: 224 DYFLKRDYPFLDATSMLSPYLSAGIISSRYC-----LKVLLKTKNSLPLNVLLTSPWFDQ 278 Query: 444 IGLREYSRYLAFNHP-CSHEKPLLAHLRFFPWVVNEVYFKVWRQGRTGYPLVDAGMRELW 620 I RE+ +L P S + L+ + W+ N +F W++G TG+P++DAGMR+L Sbjct: 279 ILWREFYYHLLIGFPKISRSESLVTWEKEIHWINNIKHFNAWKEGNTGFPIIDAGMRQLN 338 Query: 621 ATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGSLPDGRE 800 GW+H+R+R++ SSF VK L + WR G ++F L+D DL + GWQ+ + D Sbjct: 339 ELGWMHNRLRMITSSFLVKNLLINWREGEEHFISNLIDGDLALNNGGWQWSASVGCDSVP 398 Query: 801 LDRIDNPQFEGYKFDPYGEYVRRWLPELARLPTEWIH--HPWDAPESVLQAAGIELGSNY 974 RI NP + FD G ++++++PEL +P IH H W ++ +Y Sbjct: 399 YIRIFNPLHQSKTFDESGNFIKKFIPELKNVPNHHIHQPHEWSKQKN--------FKIDY 450 Query: 975 PLPIVELDEAK 1007 P PI+ E++ Sbjct: 451 PNPIINYSESR 461
>Q4KML2:CRYD_DANRE Cryptochrome DASH - Danio rerio (Zebrafish) (Brachydanio rerio)| Length = 520 Score = 123 bits (309), Expect = 2e-27 Identities = 93/311 (29%), Positives = 137/311 (44%), Gaps = 9/311 (2%) Frame = +3 Query: 96 PPKRINSGDLTRCSS-------DDLIFEDDSERGSNALLARAWSPGWQ-NADKAFTAFIN 251 PP + G + S DD G LAR W NA + N Sbjct: 185 PPSGLEEGPIPTFDSLGQTEPLDDCRSAFPCRGGETEALARLKHYFWDTNAVATYKETRN 244 Query: 252 GPL-IDYSVNRKKADSANTSLLSPYLHFGELSVRKVFHQVRMKQLTWSNESNRDGEEGCS 428 G + +D+S SP+L G +S R ++ Q++ E R + Sbjct: 245 GMIGVDFSTK-----------FSPWLALGCISPRYIYEQIK------KYEVERTANQSTY 287 Query: 429 LFLRSIGLREYSRYLAFNHPCSHEKPLLAHLRFFPWVVNEVYFKVWRQGRTGYPLVDAGM 608 + + R+Y +++A + + PW + F W++GRTG P VDA M Sbjct: 288 WVIFELLWRDYFKFVALKYGNRIFYMNGLQDKHVPWNTDMKMFDAWKEGRTGVPFVDANM 347 Query: 609 RELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGSLP 788 REL TG++ +R R V+SF K L L WR G ++F L+D D+ S+ W Y +G Sbjct: 348 RELALTGFMSNRGRQNVASFLTKDLGLDWRLGAEWFEYLLVDHDVCSNYGNWLYSAGIGN 407 Query: 789 DGRELDRIDNPQFEGYKFDPYGEYVRRWLPELARLPTEWIHHPWDAPESVLQAAGIELGS 968 D RE +R N +G +D G+YVR+W+PEL + +H PW S L A + L Sbjct: 408 DPRE-NRKFNMIKQGLDYDNNGDYVRQWVPELRGIKGGDVHTPWTLSNSALSHAQVSLNQ 466 Query: 969 NYPLPIVELDE 1001 YP PI+ E Sbjct: 467 TYPCPIITAPE 477
>Q8QG61:CRY1_CHICK Cryptochrome-1 - Gallus gallus (Chicken)| Length = 621 Score = 123 bits (309), Expect = 2e-27 Identities = 87/244 (35%), Positives = 126/244 (51%), Gaps = 4/244 (1%) Frame = +3 Query: 297 ANTSLLSPYLHFGELSVRKVFHQVRMKQLTWSNESNRDGEEGCSLFLRSIGLREYSRYLA 476 A+ + LSPYL FG LS R + K + ++ SL+ + + RE+ A Sbjct: 246 ASPTGLSPYLRFGCLSCRLFY----FKLTDLYKKVKKNSSPPLSLYGQLLW-REFFYTAA 300 Query: 477 FNHPCSHE---KPLLAHLRFFPWVVNEVYFKVWRQGRTGYPLVDAGMRELWATGWLHDRI 647 N+P + P+ + PW N W +GRTG+P +DA M +L GW+H Sbjct: 301 TNNPRFDKMEGNPICVQI---PWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLA 357 Query: 648 RVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGSLPDGRELDRIDNPQ 824 R V+ F + L + W GMK F + LLDAD +A W ++S S ++ P Sbjct: 358 RHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCS-SFFQQFFHCYCPV 416 Query: 825 FEGYKFDPYGEYVRRWLPELARLPTEWIHHPWDAPESVLQAAGIELGSNYPLPIVELDEA 1004 G + DP G+Y+RR+LP L P ++I+ PW+APESV +AA +G NYP P+V EA Sbjct: 417 GFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPESVQKAAKCVIGVNYPKPMVNHAEA 476 Query: 1005 KSRL 1016 SRL Sbjct: 477 -SRL 479
>Q6ZZY0:CRY1_SYLBO Cryptochrome-1 - Sylvia borin (Garden warbler)| Length = 620 Score = 122 bits (307), Expect = 4e-27 Identities = 86/244 (35%), Positives = 126/244 (51%), Gaps = 4/244 (1%) Frame = +3 Query: 297 ANTSLLSPYLHFGELSVRKVFHQVRMKQLTWSNESNRDGEEGCSLFLRSIGLREYSRYLA 476 A+ + LSPYL FG LS R + K + ++ SL+ + + RE+ A Sbjct: 246 ASPTGLSPYLRFGCLSCRLFY----FKLTDLYKKVKKNSSPPLSLYGQLLW-REFFYTAA 300 Query: 477 FNHPCSHE---KPLLAHLRFFPWVVNEVYFKVWRQGRTGYPLVDAGMRELWATGWLHDRI 647 N+P + P+ + PW N W +GRTG+P +DA M +L GW+H Sbjct: 301 TNNPRFDKMEGNPICVQI---PWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLA 357 Query: 648 RVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGSLPDGRELDRIDNPQ 824 R V+ F + L + W GMK F + LLDAD +A W ++S S ++ P Sbjct: 358 RHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCS-SFFQQFFHCYCPV 416 Query: 825 FEGYKFDPYGEYVRRWLPELARLPTEWIHHPWDAPESVLQAAGIELGSNYPLPIVELDEA 1004 G + DP G+Y+RR+LP L P ++I+ PW+APES+ +AA +G NYP P+V EA Sbjct: 417 GFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPESIQKAAKCIIGVNYPKPMVNHAEA 476 Query: 1005 KSRL 1016 SRL Sbjct: 477 -SRL 479
>Q5IZC5:CRY1_ERIRU Cryptochrome-1 - Erithacus rubecula (European robin)| Length = 620 Score = 122 bits (307), Expect = 4e-27 Identities = 86/244 (35%), Positives = 126/244 (51%), Gaps = 4/244 (1%) Frame = +3 Query: 297 ANTSLLSPYLHFGELSVRKVFHQVRMKQLTWSNESNRDGEEGCSLFLRSIGLREYSRYLA 476 A+ + LSPYL FG LS R + K + ++ SL+ + + RE+ A Sbjct: 246 ASPTGLSPYLRFGCLSCRLFY----FKLTDLYKKVKKNSSPPLSLYGQLLW-REFFYTAA 300 Query: 477 FNHPCSHE---KPLLAHLRFFPWVVNEVYFKVWRQGRTGYPLVDAGMRELWATGWLHDRI 647 N+P + P+ + PW N W +GRTG+P +DA M +L GW+H Sbjct: 301 TNNPRFDKMEGNPICVQI---PWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLA 357 Query: 648 RVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGSLPDGRELDRIDNPQ 824 R V+ F + L + W GMK F + LLDAD +A W ++S S ++ P Sbjct: 358 RHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCS-SFFQQFFHCYCPV 416 Query: 825 FEGYKFDPYGEYVRRWLPELARLPTEWIHHPWDAPESVLQAAGIELGSNYPLPIVELDEA 1004 G + DP G+Y+RR+LP L P ++I+ PW+APES+ +AA +G NYP P+V EA Sbjct: 417 GFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPESIQKAAKCIIGVNYPKPMVNHAEA 476 Query: 1005 KSRL 1016 SRL Sbjct: 477 -SRL 479
>Q75WS4:CRYD_XENLA Cryptochrome DASH - Xenopus laevis (African clawed frog)| Length = 523 Score = 122 bits (306), Expect = 5e-27 Identities = 80/248 (32%), Positives = 120/248 (48%), Gaps = 2/248 (0%) Frame = +3 Query: 315 SPYLHFGELSVRKVFHQVRMKQLTWSNESNRDGEEGCSLFLRSIGLREYSRYLAFNHPCS 494 +P+L G +S R ++ Q+ E R + + + R+Y R++A + Sbjct: 257 APWLALGCVSPRYIYEQIG------KYEKERTANQSTYWVIFELLWRDYFRFVALKY--G 308 Query: 495 HEKPLLAHL--RFFPWVVNEVYFKVWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSF 668 L L + PW + F W++GRTG P VDA MREL TG++ +R R V+SF Sbjct: 309 RRIFFLRGLQDKDIPWKRDPKLFDAWKEGRTGVPFVDANMRELAMTGFMSNRGRQNVASF 368 Query: 669 FVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGSLPDGRELDRIDNPQFEGYKFDP 848 K L + WR G ++F L+D D+ S+ W Y +G D RE +R N +G +D Sbjct: 369 LTKDLGIDWRMGAEWFEYLLVDYDVCSNYGNWLYSAGIGNDPRE-NRKFNMIKQGLDYDS 427 Query: 849 YGEYVRRWLPELARLPTEWIHHPWDAPESVLQAAGIELGSNYPLPIVELDEAKSRLQDAL 1028 G+Y+R W+PEL ++ H PW + L A + LG YP PIV E + Sbjct: 428 GGDYIRLWVPELQQIKGGDAHTPWALSNASLAHANLSLGETYPYPIVMAPEWSRHINQKP 487 Query: 1029 SEMWELEA 1052 + WE A Sbjct: 488 AGSWEKSA 495
>Q923I8:CRY2_RAT Cryptochrome-2 - Rattus norvegicus (Rat)| Length = 594 Score = 122 bits (306), Expect = 5e-27 Identities = 89/259 (34%), Positives = 134/259 (51%), Gaps = 8/259 (3%) Frame = +3 Query: 264 DYSVNRKKADS--ANTSLLSPYLHFGELSVRKVFHQVRMKQLTWS--NESNRDGEEGCSL 431 +Y R A+S A+ + LSPYL FG LS R ++++ W + R+ SL Sbjct: 251 NYERPRMNANSLLASPTGLSPYLRFGCLSCRLFYYRL------WDLYRKVKRNSTPPLSL 304 Query: 432 FLRSIGLREYSRYLAFNHPCSHE---KPLLAHLRFFPWVVNEVYFKVWRQGRTGYPLVDA 602 F + + RE+ A N+P P+ + PW N W +G+TG+P +DA Sbjct: 305 FGQLLW-REFFYTAATNNPRFDRMEGNPICIQI---PWDRNPEALAKWAEGKTGFPWIDA 360 Query: 603 GMRELWATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISG 779 M +L GW+H R V+ F + L + W G++ F + LLDAD +A W ++S Sbjct: 361 IMTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSC 420 Query: 780 SLPDGRELDRIDNPQFEGYKFDPYGEYVRRWLPELARLPTEWIHHPWDAPESVLQAAGIE 959 S ++ P G + DP G+Y+RR+LP+L P+ +I+ PW+APESV +AA Sbjct: 421 SA-FFQQFFHCYCPVGFGRRTDPSGDYIRRYLPKLKGFPSRYIYEPWNAPESVQKAANCI 479 Query: 960 LGSNYPLPIVELDEAKSRL 1016 +G +YP PIV E SRL Sbjct: 480 IGVDYPRPIVNHAET-SRL 497
>Q9R194:CRY2_MOUSE Cryptochrome-2 - Mus musculus (Mouse)| Length = 592 Score = 121 bits (304), Expect = 9e-27 Identities = 89/259 (34%), Positives = 134/259 (51%), Gaps = 8/259 (3%) Frame = +3 Query: 264 DYSVNRKKADS--ANTSLLSPYLHFGELSVRKVFHQVRMKQLTWS--NESNRDGEEGCSL 431 +Y R A+S A+ + LSPYL FG LS R ++++ W + R+ SL Sbjct: 251 NYERPRMNANSLLASPTGLSPYLRFGCLSCRLFYYRL------WDLYKKVKRNSTPPLSL 304 Query: 432 FLRSIGLREYSRYLAFNHPCSHE---KPLLAHLRFFPWVVNEVYFKVWRQGRTGYPLVDA 602 F + + RE+ A N+P P+ + PW N W +G+TG+P +DA Sbjct: 305 FGQLLW-REFFYTAATNNPRFDRMEGNPICIQI---PWDRNPEALAKWAEGKTGFPWIDA 360 Query: 603 GMRELWATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISG 779 M +L GW+H R V+ F + L + W G++ F + LLDAD +A W ++S Sbjct: 361 IMTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSC 420 Query: 780 SLPDGRELDRIDNPQFEGYKFDPYGEYVRRWLPELARLPTEWIHHPWDAPESVLQAAGIE 959 S ++ P G + DP G+Y+RR+LP+L P+ +I+ PW+APESV +AA Sbjct: 421 SA-FFQQFFHCYCPVGFGRRTDPSGDYIRRYLPKLKGFPSRYIYEPWNAPESVQKAAKCI 479 Query: 960 LGSNYPLPIVELDEAKSRL 1016 +G +YP PIV E SRL Sbjct: 480 IGVDYPRPIVNHAET-SRL 497
>Q49AN0:CRY2_HUMAN Cryptochrome-2 - Homo sapiens (Human)| Length = 593 Score = 121 bits (304), Expect = 9e-27 Identities = 88/259 (33%), Positives = 134/259 (51%), Gaps = 8/259 (3%) Frame = +3 Query: 264 DYSVNRKKADS--ANTSLLSPYLHFGELSVRKVFHQVRMKQLTWS--NESNRDGEEGCSL 431 +Y R A+S A+ + LSPYL FG LS R ++++ W + R+ SL Sbjct: 252 NYERPRMNANSLLASPTGLSPYLRFGCLSCRLFYYRL------WDLYKKVKRNSTPPLSL 305 Query: 432 FLRSIGLREYSRYLAFNHPCSHE---KPLLAHLRFFPWVVNEVYFKVWRQGRTGYPLVDA 602 F + + RE+ A N+P P+ + PW N W +G+TG+P +DA Sbjct: 306 FGQLLW-REFFYTAATNNPRFDRMEGNPICIQI---PWDRNPEALAKWAEGKTGFPWIDA 361 Query: 603 GMRELWATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISG 779 M +L GW+H R V+ F + L + W G++ F + LLDAD +A W ++S Sbjct: 362 IMTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSC 421 Query: 780 SLPDGRELDRIDNPQFEGYKFDPYGEYVRRWLPELARLPTEWIHHPWDAPESVLQAAGIE 959 S ++ P G + DP G+Y+RR+LP+L P+ +I+ PW+APES+ +AA Sbjct: 422 SA-FFQQFFHCYCPVGFGRRTDPSGDYIRRYLPKLKAFPSRYIYEPWNAPESIQKAAKCI 480 Query: 960 LGSNYPLPIVELDEAKSRL 1016 +G +YP PIV E SRL Sbjct: 481 IGVDYPRPIVNHAET-SRL 498
>Q8QG60:CRY2_CHICK Cryptochrome-2 - Gallus gallus (Chicken)| Length = 582 Score = 120 bits (302), Expect = 2e-26 Identities = 90/298 (30%), Positives = 149/298 (50%), Gaps = 13/298 (4%) Frame = +3 Query: 264 DYSVNRKKADS--ANTSLLSPYLHFGELSVRKVFHQVRMKQLTWS--NESNRDGEEGCSL 431 +Y R A+S A+ + LSPYL FG LS R ++++ W + R+ SL Sbjct: 242 NYERPRMNANSLLASPTGLSPYLRFGCLSCRLFYYRL------WELYKKVKRNSTPPLSL 295 Query: 432 FLRSIGLREYSRYLAFNHPCSHE---KPLLAHLRFFPWVVNEVYFKVWRQGRTGYPLVDA 602 + + + RE+ A N+P P+ + PW N W +G+TG+P +DA Sbjct: 296 YGQLLW-REFFYTAATNNPKFDRMEGNPICIQI---PWDKNPEALAKWAEGKTGFPWIDA 351 Query: 603 GMRELWATGWLHDRIRVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISG 779 M +L GW+H R V+ F + L + W G++ F + LLDAD +A W ++S Sbjct: 352 IMTQLRQEGWIHHLARHAVACFLTRGDLWISWESGVRVFDELLLDADFSVNAGSWMWLSC 411 Query: 780 SLPDGRELDRIDNPQFEGYKFDPYGEYVRRWLPELARLPTEWIHHPWDAPESVLQAAGIE 959 S ++ P G + DP G+YV+R+LP+L P+ +I+ PW+APESV +AA Sbjct: 412 SA-FFQQFFHCYCPVGFGRRTDPSGDYVKRYLPKLKGFPSRYIYEPWNAPESVQKAAKCI 470 Query: 960 LGSNYPLPIVELDEAKSRLQDALSEMWELEAASR-----AEIENGMEEGLGDSSDEPP 1118 +G +YP P+V E + + ++++ + R A + + +E+ G +D P Sbjct: 471 IGVDYPKPMVNHAETSRLNIERMKQIYQQLSRYRGLCLLASVPSCVEDLSGPVTDSAP 528
>Q8WP19:CRY1_MACFA Cryptochrome-1 - Macaca fascicularis (Crab eating macaque)| (Cynomolgus monkey) Length = 586 Score = 120 bits (302), Expect = 2e-26 Identities = 85/244 (34%), Positives = 124/244 (50%), Gaps = 4/244 (1%) Frame = +3 Query: 297 ANTSLLSPYLHFGELSVRKVFHQVRMKQLTWSNESNRDGEEGCSLFLRSIGLREYSRYLA 476 A+ + LSPYL FG LS R + K + R+ SL+ + + RE+ A Sbjct: 246 ASPTGLSPYLRFGCLSCRLFY----FKLTDLYKKVKRNSSPPLSLYGQLLW-REFFYTAA 300 Query: 477 FNHPCSHE---KPLLAHLRFFPWVVNEVYFKVWRQGRTGYPLVDAGMRELWATGWLHDRI 647 N+P + P+ + PW N W +GRTG+P +DA M +L GW+H Sbjct: 301 TNNPRFDKMEGNPICVQI---PWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLA 357 Query: 648 RVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGSLPDGRELDRIDNPQ 824 R V+ F + L + W GMK F + LLDAD +A W ++S S ++ P Sbjct: 358 RHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCS-SFFQQFFHCYCPV 416 Query: 825 FEGYKFDPYGEYVRRWLPELARLPTEWIHHPWDAPESVLQAAGIELGSNYPLPIVELDEA 1004 G + DP G+Y+RR+LP L P ++I+ PW+APE + + A +G NYP P+V EA Sbjct: 417 GFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGINYPKPMVNHAEA 476 Query: 1005 KSRL 1016 SRL Sbjct: 477 -SRL 479
>Q32Q86:CRY1_RAT Cryptochrome-1 - Rattus norvegicus (Rat)| Length = 588 Score = 119 bits (299), Expect = 3e-26 Identities = 84/244 (34%), Positives = 124/244 (50%), Gaps = 4/244 (1%) Frame = +3 Query: 297 ANTSLLSPYLHFGELSVRKVFHQVRMKQLTWSNESNRDGEEGCSLFLRSIGLREYSRYLA 476 A+ + LSPYL FG LS R + K + ++ SL+ + + RE+ A Sbjct: 246 ASPTGLSPYLRFGCLSCRLFY----FKLTDLYKKVKKNSSPPLSLYGQLLW-REFFYTAA 300 Query: 477 FNHPCSHE---KPLLAHLRFFPWVVNEVYFKVWRQGRTGYPLVDAGMRELWATGWLHDRI 647 N+P + P+ + PW N W +GRTG+P +DA M +L GW+H Sbjct: 301 TNNPRFDKMEGNPICVQI---PWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLA 357 Query: 648 RVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGSLPDGRELDRIDNPQ 824 R V+ F + L + W GMK F + LLDAD +A W ++S S ++ P Sbjct: 358 RHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCS-SFFQQFFHCYCPV 416 Query: 825 FEGYKFDPYGEYVRRWLPELARLPTEWIHHPWDAPESVLQAAGIELGSNYPLPIVELDEA 1004 G + DP G+Y+RR+LP L P ++I+ PW+APE + + A +G NYP P+V EA Sbjct: 417 GFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNYPKPMVNHAEA 476 Query: 1005 KSRL 1016 SRL Sbjct: 477 -SRL 479
>P97784:CRY1_MOUSE Cryptochrome-1 - Mus musculus (Mouse)| Length = 606 Score = 119 bits (299), Expect = 3e-26 Identities = 84/244 (34%), Positives = 124/244 (50%), Gaps = 4/244 (1%) Frame = +3 Query: 297 ANTSLLSPYLHFGELSVRKVFHQVRMKQLTWSNESNRDGEEGCSLFLRSIGLREYSRYLA 476 A+ + LSPYL FG LS R + K + ++ SL+ + + RE+ A Sbjct: 246 ASPTGLSPYLRFGCLSCRLFY----FKLTDLYKKVKKNSSPPLSLYGQLLW-REFFYTAA 300 Query: 477 FNHPCSHE---KPLLAHLRFFPWVVNEVYFKVWRQGRTGYPLVDAGMRELWATGWLHDRI 647 N+P + P+ + PW N W +GRTG+P +DA M +L GW+H Sbjct: 301 TNNPRFDKMEGNPICVQI---PWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLA 357 Query: 648 RVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGSLPDGRELDRIDNPQ 824 R V+ F + L + W GMK F + LLDAD +A W ++S S ++ P Sbjct: 358 RHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCS-SFFQQFFHCYCPV 416 Query: 825 FEGYKFDPYGEYVRRWLPELARLPTEWIHHPWDAPESVLQAAGIELGSNYPLPIVELDEA 1004 G + DP G+Y+RR+LP L P ++I+ PW+APE + + A +G NYP P+V EA Sbjct: 417 GFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNYPKPMVNHAEA 476 Query: 1005 KSRL 1016 SRL Sbjct: 477 -SRL 479
>Q16526:CRY1_HUMAN Cryptochrome-1 - Homo sapiens (Human)| Length = 586 Score = 119 bits (299), Expect = 3e-26 Identities = 84/244 (34%), Positives = 124/244 (50%), Gaps = 4/244 (1%) Frame = +3 Query: 297 ANTSLLSPYLHFGELSVRKVFHQVRMKQLTWSNESNRDGEEGCSLFLRSIGLREYSRYLA 476 A+ + LSPYL FG LS R + K + ++ SL+ + + RE+ A Sbjct: 246 ASPTGLSPYLRFGCLSCRLFY----FKLTDLYKKVKKNSSPPLSLYGQLLW-REFFYTAA 300 Query: 477 FNHPCSHE---KPLLAHLRFFPWVVNEVYFKVWRQGRTGYPLVDAGMRELWATGWLHDRI 647 N+P + P+ + PW N W +GRTG+P +DA M +L GW+H Sbjct: 301 TNNPRFDKMEGNPICVQI---PWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLA 357 Query: 648 RVVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYISGSLPDGRELDRIDNPQ 824 R V+ F + L + W GMK F + LLDAD +A W ++S S ++ P Sbjct: 358 RHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCS-SFFQQFFHCYCPV 416 Query: 825 FEGYKFDPYGEYVRRWLPELARLPTEWIHHPWDAPESVLQAAGIELGSNYPLPIVELDEA 1004 G + DP G+Y+RR+LP L P ++I+ PW+APE + + A +G NYP P+V EA Sbjct: 417 GFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNYPKPMVNHAEA 476 Query: 1005 KSRL 1016 SRL Sbjct: 477 -SRL 479
>Q70AD6:CRY1_SPAJD Cryptochrome-1 - Spalax judaei (Blind subterranean mole rat)| Length = 587 Score = 119 bits (297), Expect = 6e-26 Identities = 84/244 (34%), Positives = 123/244 (50%), Gaps = 4/244 (1%) Frame = +3 Query: 297 ANTSLLSPYLHFGELSVRKVFHQVRMKQLTWSNESNRDGEEGCSLFLRSIGLREYSRYLA 476 A+ + LSPYL FG LS R + K + ++ SL+ + + RE+ A Sbjct: 246 ASPTGLSPYLRFGCLSCRLFY----FKLTDLYKKVKKNSSPPLSLYGQLLW-REFFYTAA 300 Query: 477 FNHPCSHE---KPLLAHLRFFPWVVNEVYFKVWRQGRTGYPLVDAGMRELWATGWLHDRI 647 N+P + P+ + PW N W +GRTG+P +DA M +L GW+H Sbjct: 301 TNNPRFDKMEGNPICVQI---PWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLA 357 Query: 648 RVVVSSFFV-KVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGSLPDGRELDRIDNPQ 824 R V+ F L + W GMK F + LLDAD +A W ++S S ++ P Sbjct: 358 RHAVACFLTGSDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCS-SFFQQFFHCYCPV 416 Query: 825 FEGYKFDPYGEYVRRWLPELARLPTEWIHHPWDAPESVLQAAGIELGSNYPLPIVELDEA 1004 G + DP G+Y+RR+LP L P ++I+ PW+APE + + A +G NYP P+V EA Sbjct: 417 GFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNYPKPMVNHAEA 476 Query: 1005 KSRL 1016 SRL Sbjct: 477 -SRL 479
>Q38JU2:CRYD_SOLLC Cryptochrome DASH, chloroplast/mitochondrial precursor - Solanum| lycopersicum (Tomato) (Lycopersicon esculentum) Length = 577 Score = 116 bits (291), Expect = 3e-25 Identities = 87/259 (33%), Positives = 123/259 (47%), Gaps = 11/259 (4%) Frame = +3 Query: 174 GSNALLARAWSPGWQ-NADKAFTAFINGPL-IDYSVNRKKADSANTSLLSPYLHFGELSV 347 G +A L R W+ + K + NG L DYS SP+L G LS Sbjct: 303 GESAALGRVHDYFWKKDLLKVYKETRNGMLGADYSTK-----------FSPWLASGSLSP 351 Query: 348 RKVFHQVRMKQLTWSNESNRDGEEGCSLFLRSIGLREYSRYLAFNHPCSHEKPLLAHLRF 527 R ++ +V+ E R + L + R+Y R+L+ LA+L F Sbjct: 352 RFIYEEVKRY------EKERLSNDSTYWVLFELIWRDYFRFLSIK---------LANLLF 396 Query: 528 ---------FPWVVNEVYFKVWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKV 680 W ++ F WR+G+TGYPL+DA M+EL ATG++ +R R +V SF V+ Sbjct: 397 QAGGPQKVNINWSQDQTMFDAWRRGQTGYPLIDANMKELAATGYMSNRGRQIVCSFLVRD 456 Query: 681 LQLPWRWGMKYFWDTLLDADLESDALGWQYISGSLPDGRELDRIDNPQFEGYKFDPYGEY 860 + + WR G ++F LLD D S+ W Y +G D RE DR + + +DP GE+ Sbjct: 457 MGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPRE-DRYFSIPKQAQNYDPEGEF 515 Query: 861 VRRWLPELARLPTEWIHHP 917 V WLPEL LP E H P Sbjct: 516 VAYWLPELRALPREKRHSP 534
>P05066:PHR_YEAST Deoxyribodipyrimidine photo-lyase, mitochondrial precursor -| Saccharomyces cerevisiae (Baker's yeast) Length = 565 Score = 113 bits (283), Expect = 2e-24 Identities = 75/245 (30%), Positives = 117/245 (47%), Gaps = 8/245 (3%) Frame = +3 Query: 303 TSLLSPYLHFGELSVRKVFHQVR-------MKQLTWSNESNRDGEEGCSLFLRSIGLREY 461 TS LS Y+ G +S R + +Q M + N S ++ F++ + R++ Sbjct: 338 TSGLSVYITTGRISTRLIVNQAFQSCNGQIMSKALKDNSSTQN-------FIKEVAWRDF 390 Query: 462 SRYLAFNHP-CSHEKPLLAHLRFFPWVVNEVYFKVWRQGRTGYPLVDAGMRELWATGWLH 638 R+ N P S P W N V F+ W G TG P+VDA MR+L TG+++ Sbjct: 391 YRHCMCNWPYTSMGMPYRLDTLDIKWENNPVAFEKWCTGNTGIPIVDAIMRKLLYTGYIN 450 Query: 639 DRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGSLPDGRELDRIDN 818 +R R++ +SF K L + WRWG ++F L+D D S+ GW + S + D + R+ N Sbjct: 451 NRSRMITASFLSKNLLIDWRWGERWFMKHLIDGDSSSNVGGWGFCSSTGIDAQPYFRVFN 510 Query: 819 PQFEGYKFDPYGEYVRRWLPELARLPTEWIHHPWDAPESVLQAAGIELGSNYPLPIVELD 998 + K+DP +V++W+PEL I PE NYP P+V+L Sbjct: 511 MDIQAKKYDPQMIFVKQWVPEL-------ISSENKRPE------------NYPKPLVDLK 551 Query: 999 EAKSR 1013 ++ R Sbjct: 552 HSRER 556
>Q651U1:CRYD_ORYSJ Cryptochrome DASH, chloroplast/mitochondrial precursor - Oryza sativa| subsp. japonica (Rice) Length = 582 Score = 109 bits (272), Expect = 5e-23 Identities = 84/255 (32%), Positives = 120/255 (47%), Gaps = 7/255 (2%) Frame = +3 Query: 174 GSNALLARAWSPGWQNAD-KAFTAFINGPL-IDYSVNRKKADSANTSLLSPYLHFGELSV 347 G +A L R W+ K + NG L DYS SP+L G LS Sbjct: 313 GESAALGRVHEYFWKKDQLKVYKETRNGMLGPDYSTK-----------FSPWLASGSLSP 361 Query: 348 RKVFHQVRMKQLTWSNESNRDGEEGCSLFLRSIGLREYSRYLAFNHPCSHEKPLLAHLRF 527 R + +V+ E R + L + R+Y R+++ + S + HL Sbjct: 362 RYICEEVKRY------EKQRIANDSTYWVLFELIWRDYFRFISAKYGNS-----IFHLGG 410 Query: 528 -----FPWVVNEVYFKVWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLP 692 W ++ F+ WR GRTGYPL+DA M+EL ATG++ +R R +V SF V+ + + Sbjct: 411 PRNVESKWSQDQALFESWRDGRTGYPLIDANMKELLATGFMSNRGRQIVCSFLVRDMGID 470 Query: 693 WRWGMKYFWDTLLDADLESDALGWQYISGSLPDGRELDRIDNPQFEGYKFDPYGEYVRRW 872 WR G ++F LLD D S+ W Y +G D RE DR + + +DP GEYV W Sbjct: 471 WRMGAEWFETCLLDYDPASNYGNWTYGAGVGNDPRE-DRYFSIPKQAKTYDPDGEYVAYW 529 Query: 873 LPELARLPTEWIHHP 917 LPEL + E + P Sbjct: 530 LPELRSIAKERRNFP 544
>Q84KJ5:CRYD_ARATH Cryptochrome DASH, chloroplast/mitochondrial precursor -| Arabidopsis thaliana (Mouse-ear cress) Length = 569 Score = 109 bits (272), Expect = 5e-23 Identities = 73/203 (35%), Positives = 104/203 (51%), Gaps = 2/203 (0%) Frame = +3 Query: 315 SPYLHFGELSVRKVFHQVRMKQLTWSNESNRDGEEGCSLFLRSIGLREYSRYLAFNHPCS 494 SP+L FG +S R ++ +V+ E R L + R+Y R+L+ C Sbjct: 333 SPWLAFGCISPRFIYEEVQRY------EKERVANNSTYWVLFELIWRDYFRFLSIK--CG 384 Query: 495 HEKPLLAHLRFFP--WVVNEVYFKVWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSF 668 + L R W ++ F+ WR +TGYPL+DA M+EL TG++ +R R +V SF Sbjct: 385 NSLFHLGGPRNVQGKWSQDQKLFESWRDAKTGYPLIDANMKELSTTGFMSNRGRQIVCSF 444 Query: 669 FVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGSLPDGRELDRIDNPQFEGYKFDP 848 V+ + L WR G ++F LLD D S+ W Y +G D RE DR + + +DP Sbjct: 445 LVRDMGLDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPRE-DRYFSIPKQAQNYDP 503 Query: 849 YGEYVRRWLPELARLPTEWIHHP 917 GEYV WL +L RLP E H P Sbjct: 504 EGEYVAFWLQQLRRLPKEKRHWP 526
>Q5IFN2:CRYD_OSTTA Cryptochrome DASH, chloroplast/mitochondrial precursor - Ostreococcus| tauri Length = 546 Score = 101 bits (251), Expect = 1e-20 Identities = 88/291 (30%), Positives = 131/291 (45%), Gaps = 8/291 (2%) Frame = +3 Query: 162 DSERGSNALLARAWSPGWQNADKAFTAFI--NGPLI-DYSVNRKKADSANTSLLSPYLHF 332 D + G + LAR W++ D+ T F NG L DYS L+P+L Sbjct: 242 DFKGGESNALARVKYYLWES-DRLATYFETRNGMLGGDYSTK-----------LAPWLAL 289 Query: 333 GELSVRKVFHQVRMKQLTWSNESNRDGEEGCSLFLRSIGLREYSRYLAFNHPCSHEKPLL 512 G +S R V ++R ES R + + + R++ ++ A H + Sbjct: 290 GCVSPRHVVSEIRRY------ESERVENKSTYWVIFELIWRDFFKFFALKHGNK-----I 338 Query: 513 AHL-----RFFPWVVNEVYFKVWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVK 677 HL R W +E K W+ G TGYPL+DA MREL ATG++ +R R V+S+ Sbjct: 339 FHLDGTAGRRASWKRDEKILKAWKTGTTGYPLIDANMRELAATGFMSNRGRQNVASWLAL 398 Query: 678 VLQLPWRWGMKYFWDTLLDADLESDALGWQYISGSLPDGRELDRIDNPQFEGYKFDPYGE 857 + WR G +F LLD D S+ W +G G ++R N + +DP GE Sbjct: 399 DAGIDWRHGADWFEHHLLDYDTASNWGNWCAAAGM--TGGRINRF-NIAKQTKDYDPAGE 455 Query: 858 YVRRWLPELARLPTEWIHHPWDAPESVLQAAGIELGSNYPLPIVELDEAKS 1010 Y++ W+ ELA +P +I P AP + G+ + LP + E S Sbjct: 456 YIKTWVKELAEVPAAYIADPNQAPRELRDRIGLNYPNKLALPRRDFTEMGS 506
>Q7SI68:CRYD_NEUCR Putative cryptochrome DASH, mitochondrial precursor - Neurospora| crassa Length = 745 Score = 99.0 bits (245), Expect = 6e-20 Identities = 54/144 (37%), Positives = 83/144 (57%), Gaps = 1/144 (0%) Frame = +3 Query: 531 PWVVNEVYFKVWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMK 710 P V+E+ + + G TG L+DA REL TG+ +R R V+SF K L++ WR+G + Sbjct: 408 PEKVSEILAR-FNAGTTGMGLIDASQRELIHTGYTSNRTRQNVASFLAKHLEIDWRYGAE 466 Query: 711 YFWDTLLDADLESDALGWQYISGSLPDGRELDRIDNPQFEGYKFDPYGEYVRRWLPELAR 890 ++ L+D D+ S+ WQY++G D R RI NP + + +D G YVR W+PE+A+ Sbjct: 467 WYEMLLVDYDVSSNWANWQYVAGVGNDPRGAARIFNPVKQAFDYDKDGTYVRTWVPEVAK 526 Query: 891 LPT-EWIHHPWDAPESVLQAAGIE 959 E + W A + L+ AG+E Sbjct: 527 FENLENVFQAWTASKEDLKTAGLE 550
>Q9KS67:CRY2_VIBCH Cryptochrome-like protein cry2 - Vibrio cholerae| Length = 504 Score = 91.3 bits (225), Expect = 1e-17 Identities = 74/261 (28%), Positives = 123/261 (47%), Gaps = 7/261 (2%) Frame = +3 Query: 306 SLLSPYLHFGELSVRKVFHQVRMKQLTWSNESNRDGEEGCSLFLRSIGLREYSRYLA-FN 482 S +SPYL +G +S+R+++ Q +K WS R SL S L + ++ F Sbjct: 228 SRMSPYLAWGNISLREMY-QTLLKH--WSVAGFRR-----SLIALSSRLHWHCHFIQKFE 279 Query: 483 HPCSHEKPLLAHLRFFPWVVNE------VYFKVWRQGRTGYPLVDAGMRELWATGWLHDR 644 C E + R + ++ + W+ G TG PLVDA MR L TG+L+ R Sbjct: 280 SECEMEFRCVN--RAYDSLLQQSSDAPAAQLAAWQTGHTGIPLVDACMRCLIQTGYLNFR 337 Query: 645 IRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGSLPDGRELDRIDNPQ 824 +R ++ S + + WR G+ Y LD + +Q +G G RI NP Sbjct: 338 MRAMLVSVLTHHMNVDWRAGVTYLAQLFLDFEPGIHYPQFQMQAGVT--GTNTIRIYNPT 395 Query: 825 FEGYKFDPYGEYVRRWLPELARLPTEWIHHPWDAPESVLQAAGIELGSNYPLPIVELDEA 1004 + + D G+++ +W+PELA++P + PW Q + L S Y P+++L+ + Sbjct: 396 KQAQEHDSEGQFIHKWVPELAQVPVPLLFEPWLMTPLEAQMYQVPLESPYLKPVMDLEAS 455 Query: 1005 KSRLQDALSEMWELEAASRAE 1067 + +D L + W+ A +AE Sbjct: 456 AKQARDRLWQ-WQKLPAVQAE 475
>Q5QXE0:CRYD_IDILO Cryptochrome DASH - Idiomarina loihiensis| Length = 449 Score = 90.5 bits (223), Expect = 2e-17 Identities = 85/282 (30%), Positives = 130/282 (46%), Gaps = 8/282 (2%) Frame = +3 Query: 81 PAPMLP--PKRINSGDLTRCSSDDLIFEDDSERGSNALLARAWSPGWQNADKAFTAFING 254 P LP PK I+ + ++L DD E G A L S + + + A T Sbjct: 182 PVNALPSLPKNISYPGFKAETLNELA-SDDFEGGERAALTHLTS--YFSGESAGT----- 233 Query: 255 PLIDYSVNRKKADSANTSL-LSPYLHFGELSVRKVFHQVRMKQLTWSNESNRDGEEGCSL 431 Y R D ++S SP+L G LSVR++ +R + + GE S Sbjct: 234 ----YKQTRNALDDFSSSTKFSPWLAQGCLSVRQIMAALRAYETEF-------GENESSY 282 Query: 432 FLR-SIGLREYSRYLAFNHPCSHEKPLLAHLRFFPWVVNEVY----FKVWRQGRTGYPLV 596 ++ + REY + A H K L A + F+ W G T YP+V Sbjct: 283 WISFELLWREYFFWYALKHG----KRLFAFSGLSGKSPKTSFYSERFQKWCSGNTPYPIV 338 Query: 597 DAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYIS 776 +A M++L ATG++ +R R +V+S FV L L WR+G YF L+D D+ S+ WQY++ Sbjct: 339 NACMKQLNATGYMSNRGRQLVASCFVHELSLDWRYGAAYFEQQLIDYDVSSNWGNWQYLA 398 Query: 777 GSLPDGRELDRIDNPQFEGYKFDPYGEYVRRWLPELARLPTE 902 G D R R N + + ++DP E++ RW +L+ P + Sbjct: 399 GVGADPRG-HRQFNLEKQTERYDPDNEFIERWAGDLSGQPID 439
>Q9KR33:CRYD_VIBCH Cryptochrome DASH - Vibrio cholerae| Length = 461 Score = 80.1 bits (196), Expect = 3e-14 Identities = 42/106 (39%), Positives = 64/106 (60%) Frame = +3 Query: 555 FKVWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLD 734 F W+ G T +P+V+A MR+L TG++ +R R +V+S V L L WR+G YF L+D Sbjct: 313 FLQWKHGETPFPIVNACMRQLNQTGYMSNRGRQLVASCLVHELGLDWRYGAAYFETQLVD 372 Query: 735 ADLESDALGWQYISGSLPDGRELDRIDNPQFEGYKFDPYGEYVRRW 872 D+ S+ WQY++G D R R N + + + +DP GE+V +W Sbjct: 373 YDVGSNWGNWQYLAGVGADPRG-SRQFNLEKQAHTYDPKGEFVAKW 417
>Q87JP5:CRYD_VIBPA Cryptochrome DASH - Vibrio parahaemolyticus| Length = 445 Score = 79.0 bits (193), Expect = 7e-14 Identities = 83/303 (27%), Positives = 129/303 (42%), Gaps = 14/303 (4%) Frame = +3 Query: 6 VLDDHGSPFTM------FTSFWNKCLCMVDPPAPMLPPKRI----NSGDLTRCSSDDLIF 155 + D+ PFT+ FT F KC+ +D P+ P R+ L SS + Sbjct: 137 LFDESKLPFTLPDLPETFTQF-RKCVEGIDIAHPIDAPSRLPPMPKGAQLPTLSS---FY 192 Query: 156 EDDSERGSNALLARAWSPGWQNADKAFTAFINGPLIDYSVNRKKADS-ANTSLLSPYLHF 332 D+S S W F +G Y R D A ++ SP+L Sbjct: 193 FDESALFSGG--------EWSGLAHCRRYFFSGLASSYKETRNGLDGMAYSTKFSPWLAL 244 Query: 333 GELSVRKVFHQVRMKQLTWSNESNRDGEEGCSLFLRSIGLREYSRYLAFNHPCSHEKPL- 509 G +S R + +KQ E + + + REY + A C ++ Sbjct: 245 GCVSPRMI--HAMLKQY----EQTQGANDSTYWIYFELLWREYFYWYA---RCYQQRLFR 295 Query: 510 LAHLRFFPWVVNEVY--FKVWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVL 683 +R P + + F+ W+ G T YP+V+A M +L TG++ +R R +V+S V L Sbjct: 296 FGGIRNQPPLTSFYAHRFQQWKNGTTPYPIVNACMHQLNHTGYMSNRGRQLVASCLVHEL 355 Query: 684 QLPWRWGMKYFWDTLLDADLESDALGWQYISGSLPDGRELDRIDNPQFEGYKFDPYGEYV 863 L WR+G YF L+D D+ S+ WQY++G D R R N + + +DP E++ Sbjct: 356 GLDWRYGAAYFETQLIDYDVGSNWGNWQYLAGVGADPRG-SRQFNLEKQTQMYDPNHEFI 414 Query: 864 RRW 872 RW Sbjct: 415 ERW 417
>Q4I1Q6:CRYD_GIBZE Putative cryptochrome DASH - Gibberella zeae (Fusarium graminearum)| Length = 678 Score = 73.2 bits (178), Expect = 4e-12 Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 1/146 (0%) Frame = +3 Query: 564 WRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADL 743 W +G TG LVDA REL TG+ +R R V+S+ K L + WR G +Y+ +L+D D Sbjct: 391 WIRGTTGMGLVDASQRELQLTGYTSNRARQNVASYLTKSLGIDWRLGAEYYEQSLIDYDT 450 Query: 744 ESDALGWQYISGSLPDGRELDRIDNPQFEGYKFDPYGEYVRRWLPELARLP-TEWIHHPW 920 S+ WQY + D R R N + + +D G + R W+ E+ + E + Sbjct: 451 HSNWGNWQYQASCGNDPR--SRSFNQVKQAFDYDQDGRFTRTWVNEVKSIDRLEHVFQIC 508 Query: 921 DAPESVLQAAGIELGSNYPLPIVELD 998 P+ L+ G+ P+ +D Sbjct: 509 TCPKQELEKHGLSDNIMVTNPLKRID 534
>Q05380:YAT1_SYNP1 Hypothetical 31.6 kDa protein in atpI 5'region - Synechococcus sp.| (strain PCC 6716) Length = 284 Score = 44.3 bits (103), Expect = 0.002 Identities = 34/123 (27%), Positives = 50/123 (40%), Gaps = 5/123 (4%) Frame = +3 Query: 6 VLDDHGSPFTMFTSFWNKCLCM-----VDPPAPMLPPKRINSGDLTRCSSDDLIFEDDSE 170 V G P+T++T FW + V PP P + + S+ DL F+ E Sbjct: 139 VQTQQGQPYTVYTPFWRNWSALPKAAPVPPPPDFAPLEATEIASIPLPSTHDLGFDWSGE 198 Query: 171 RGSNALLARAWSPGWQNADKAFTAFINGPLIDYSVNRKKADSANTSLLSPYLHFGELSVR 350 +LA PG A + F + +Y R T+LLSP L FG + +R Sbjct: 199 ----LILA----PGEAAAAQQLAHFSQHAIYEYGEQRNYPGRPGTALLSPALKFGVIGIR 250 Query: 351 KVF 359 V+ Sbjct: 251 TVW 253
>Q13796:SHRM2_HUMAN Protein Shroom2 - Homo sapiens (Human)| Length = 1616 Score = 36.6 bits (83), Expect = 0.39 Identities = 41/158 (25%), Positives = 61/158 (38%), Gaps = 8/158 (5%) Frame = +3 Query: 915 PWDAPESVLQAAGIELGSNYPLPI-VELDEAKSRLQ-----DALSEMWELEAASRAEIEN 1076 P DAP VL G +P P LD +RL S + E Sbjct: 1082 PADAPVGVL-------GRPFPTPSPASLDVYVARLSLSHSPSVFSSAQPQDTPKATVCER 1134 Query: 1077 GMEEGLGDSSDEPPIAF-PQELQHMEVDRATSHXXXXXXXXXXXXDQMVPSITSSLVRAE 1253 G + GD+S P A P + QH+ + AT Q + L++ E Sbjct: 1135 GSQHVSGDASRPLPEALLPPKQQHLRLQTATMETSRSPSPQFAP--QKLTDKPPLLIQDE 1192 Query: 1254 TETELSAVFESEVSRPEVPSQ-VHFQAQPRMESREQVA 1364 T + V ++ + VP + VH ++QP ESR+ +A Sbjct: 1193 DSTRIERVMDNNTTVKMVPIKIVHSESQPEKESRQSLA 1230
>Q16798:MAON_HUMAN NADP-dependent malic enzyme, mitochondrial precursor - Homo sapiens| (Human) Length = 604 Score = 36.2 bits (82), Expect = 0.50 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Frame = +3 Query: 1425 GIAPSTSEASSSWTGREGGVVPVWSP--PAASGHSDPYAADETDISSRSY-LDRNP 1583 G A T + W GR G +P W+P PA HS P A + R Y + RNP Sbjct: 2 GAALGTGTRLAPWPGRACGALPRWTPTAPAQGCHSKPGPARPVPLKKRGYDVTRNP 57
>Q5Y5T1:ZDH20_MOUSE Probable palmitoyltransferase ZDHHC20 - Mus musculus (Mouse)| Length = 380 Score = 35.4 bits (80), Expect = 0.86 Identities = 21/48 (43%), Positives = 28/48 (58%) Frame = +3 Query: 960 LGSNYPLPIVELDEAKSRLQDALSEMWELEAASRAEIENGMEEGLGDS 1103 +GSN P PI L E+K+RL D+ S+ W +ENG EEG+ S Sbjct: 331 IGSNQPFPIKPLSESKNRLLDSESQ-W---------LENGAEEGVTKS 368
>Q0VC89:ZDH20_BOVIN Probable palmitoyltransferase ZDHHC20 - Bos taurus (Bovine)| Length = 365 Score = 35.4 bits (80), Expect = 0.86 Identities = 23/63 (36%), Positives = 31/63 (49%) Frame = +3 Query: 915 PWDAPESVLQAAGIELGSNYPLPIVELDEAKSRLQDALSEMWELEAASRAEIENGMEEGL 1094 P A S + +GSN P PI L E+K+RL D+ W +E+G EEG+ Sbjct: 301 PEQASVSNQSESARSIGSNQPFPIKPLSESKNRLLDS-DPQW---------LESGSEEGV 350 Query: 1095 GDS 1103 G S Sbjct: 351 GGS 353
>Q68EZ2:FOXJ2_XENLA Forkhead box protein J2 - Xenopus laevis (African clawed frog)| Length = 512 Score = 35.0 bits (79), Expect = 1.1 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 3/34 (8%) Frame = -3 Query: 1110 HPRSLP---GLPPFHSLSQHERPPQAPTSLTGRP 1018 HP ++P GLPP H +QH++PP P RP Sbjct: 293 HPHNVPSISGLPPSHHQAQHQQPPYLPQQQMPRP 326
>Q9V3D5:DYRK2_DROME Dual specificity tyrosine-phosphorylation-regulated kinase 2 -| Drosophila melanogaster (Fruit fly) Length = 722 Score = 35.0 bits (79), Expect = 1.1 Identities = 34/119 (28%), Positives = 50/119 (42%), Gaps = 24/119 (20%) Frame = +3 Query: 1215 MVPSITSSLVRAETETELSAVFESEVSRPEVPSQVHFQAQP------------------- 1337 +V SITS+ T +A+ + SR + PSQ H AQ Sbjct: 539 VVASITST-----TAVHNAAIATTTKSRQQPPSQSHGHAQSNGHLPDIKLSASDKYNSMQ 593 Query: 1338 RMESREQVASDGTAARYNQQYTLHRVQGGGIAPSTSEASSSWT-----GREGGVVPVWS 1499 ++ R ++ S + QQY+LHR+ GG + ST SS+ T G G+V S Sbjct: 594 KVAVRSKITSSVSDLESVQQYSLHRIYGGVGSGSTHHVSSAATRKHLPGTGSGIVGAMS 652
>Q5W0Z9:ZDH20_HUMAN Probable palmitoyltransferase ZDHHC20 - Homo sapiens (Human)| Length = 365 Score = 34.7 bits (78), Expect = 1.5 Identities = 20/44 (45%), Positives = 26/44 (59%) Frame = +3 Query: 963 GSNYPLPIVELDEAKSRLQDALSEMWELEAASRAEIENGMEEGL 1094 GSN P PI L E+K+RL D+ S+ W +ENG EEG+ Sbjct: 317 GSNQPFPIKPLSESKNRLLDSESQ-W---------LENGAEEGI 350
>P32583:SRP40_YEAST Suppressor protein SRP40 - Saccharomyces cerevisiae (Baker's yeast)| Length = 406 Score = 34.7 bits (78), Expect = 1.5 Identities = 29/88 (32%), Positives = 42/88 (47%) Frame = -2 Query: 1060 REAASSSHISDRASCNLDLASSSSTMGRG*LEPSSIPAACSTDSGASQGWCIHSVGSLAS 881 + ++SSS S +S + +SSSS+ G SS ++ S+DS S S S +S Sbjct: 24 KSSSSSSSSSSSSSSSSSSSSSSSSSGESSSSSSSSSSSSSSDSSDSSDSESSSSSSSSS 83 Query: 880 SGSHRRTYSPYGSNLYPSNCGLSMRSSS 797 S S + S S S+ G S SSS Sbjct: 84 SSSSSSSDSESSSESDSSSSGSSSSSSS 111
>Q5AWJ3:PFA3_EMENI Palmitoyltransferase pfa3 - Emericella nidulans (Aspergillus| nidulans) Length = 516 Score = 34.7 bits (78), Expect = 1.5 Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 1/94 (1%) Frame = +3 Query: 1308 PSQVHFQAQPRM-ESREQVASDGTAARYNQQYTLHRVQGGGIAPSTSEASSSWTGREGGV 1484 PS+ +AQ R+ + REQVA R +Q+ R S +W G E + Sbjct: 396 PSRKFLEAQERVRQQREQVAEQ---QRQHQRDLYLRNMNN---------SRAWLGNE--L 441 Query: 1485 VPVWSPPAASGHSDPYAADETDISSRSYLDRNPQ 1586 P W+P HSD A T +S ++ R+P+ Sbjct: 442 PPGWTPDQPLSHSDDVARPATGVSMKTLAPRSPR 475
>Q8BZZ3:WWP1_MOUSE NEDD4-like E3 ubiquitin-protein ligase WWP1 - Mus musculus (Mouse)| Length = 918 Score = 34.3 bits (77), Expect = 1.9 Identities = 61/245 (24%), Positives = 101/245 (41%), Gaps = 14/245 (5%) Frame = +3 Query: 903 WIHHPWDAPESVLQAAGIELGSNYPLPIVELDEAKSRLQDAL-SEMWELEAASRAEIENG 1079 W HH A +++L A ++L +L++ K +L+ +L ++ ++ + +G Sbjct: 83 WSHHTLKA-DALLGKATVDLKQVLLTHNRKLEKVKEQLKLSLENKNGIVQTGELTVVLDG 141 Query: 1080 M---EEGLGDSSDEPPIAFPQ--ELQHMEVDRATSHXXXXXXXXXXXXDQMVPSITSSLV 1244 + +E + + S PPI Q + H D AT D V + T Sbjct: 142 LVIEQEPVTNRSSSPPIEIQQNGDALHENGDPATRTTPRLPVEGTIGIDNHVSTNT---- 197 Query: 1245 RAETETELSAVFESEVSRPEVPSQVHFQAQPR-MESREQVASDGTAARYNQQYTLHRVQG 1421 + S V E + P PSQV A+P+ + + V S T+ N + + Sbjct: 198 -VVPNSCCSHVVNGE-NTPSSPSQV--AARPKNAPAPKPVTSAPTSDTVNGESSSVLADN 253 Query: 1422 ----GGIAPSTSEASSS-WTGREGGVVPVWSPPAASGHSD--PYAADETDISSRSYLDRN 1580 G + PS S+S T PV PPA+S HS+ P A+ E +RS +D + Sbjct: 254 TSTMGTLLPSEDTTSTSNCTSTTTQEPPVQEPPASSEHSECIPSASAEVGPEARSLIDPD 313 Query: 1581 PQSHN 1595 S N Sbjct: 314 SDSRN 318
>P18502:PTC_DROME Protein patched - Drosophila melanogaster (Fruit fly)| Length = 1286 Score = 33.9 bits (76), Expect = 2.5 Identities = 23/71 (32%), Positives = 28/71 (39%), Gaps = 2/71 (2%) Frame = -3 Query: 1620 KAGSSSSTYYVTAGSCPDNSYWKCQFHPQHKDLNGPTQPEVTRRVLPHLLSQSSCLMPLT 1441 ++ S YV GS + H HKDLN P+ +T S SS MP Sbjct: 1130 RSSKRSGKSYVVQGSRSSRGSCQKSHHHHHKDLNDPSLTTITEEPQSWKSSNSSIQMPND 1189 Query: 1440 WMVLCR--RPA 1414 W R RPA Sbjct: 1190 WTYQPREQRPA 1200
>Q86VE3:SATL1_HUMAN Spermidine/spermine N(1)-acetyltransferase-like protein 1 - Homo| sapiens (Human) Length = 508 Score = 33.1 bits (74), Expect = 4.3 Identities = 17/63 (26%), Positives = 29/63 (46%) Frame = +3 Query: 1281 ESEVSRPEVPSQVHFQAQPRMESREQVASDGTAARYNQQYTLHRVQGGGIAPSTSEASSS 1460 E+ +S+P P + Q+ PR S Q ++ + + L Q GG PS + +S Sbjct: 156 EASISQPGPPQRAPSQSGPRQSSTSQAGTNQSGISQPVMWQLDMRQSGGSQPSMRQVGTS 215 Query: 1461 WTG 1469 +G Sbjct: 216 QSG 218
>Q2SYJ0:RUVX_BURTA Putative Holliday junction resolvase - Burkholderia thailandensis| (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) Length = 146 Score = 33.1 bits (74), Expect = 4.3 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 5/85 (5%) Frame = +3 Query: 834 YKFDPYGEYVRRWLPE--LARLPTEWIHHPWDAPESVLQAA---GIELGSNYPLPIVELD 998 ++F GE + W P+ + LP HP AP + Q A G +L + LP+ +D Sbjct: 46 HRFKAVGELIAEWKPDALVVGLPL----HPDGAPHEMTQRALRFGNQLNGRFNLPVSWVD 101 Query: 999 EAKSRLQDALSEMWELEAASRAEIE 1073 E S ++ +AA+R + E Sbjct: 102 ERYSSVEARAGLRARGDAANRVDAE 126
>P09814:POLG_TVMV Genome polyprotein [Contains: P1 proteinase - Tobacco vein mottling| virus (TVMV) Length = 3023 Score = 32.7 bits (73), Expect = 5.6 Identities = 20/62 (32%), Positives = 25/62 (40%) Frame = +3 Query: 666 FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGSLPDGRELDRIDNPQFEGYKFD 845 F+ K +Q PW GM F+ GW + G LPDG D QF+ Sbjct: 2453 FYSKHIQCPWSVGMTKFYG------------GWNELLGKLPDGWVYCDADGSQFDS-SLS 2499 Query: 846 PY 851 PY Sbjct: 2500 PY 2501
>P34205:PHR_CARAU Deoxyribodipyrimidine photo-lyase - Carassius auratus (Goldfish)| Length = 556 Score = 32.7 bits (73), Expect = 5.6 Identities = 17/58 (29%), Positives = 31/58 (53%) Frame = +3 Query: 207 PGWQNADKAFTAFINGPLIDYSVNRKKADSANTSLLSPYLHFGELSVRKVFHQVRMKQ 380 PG +FI+ L ++ +R + S LSP++H G+LS ++V QV+ ++ Sbjct: 309 PGTSGGMNMLESFIDQRLRLFATHRNNPNYDALSHLSPWIHTGQLSAQRVVKQVKREK 366
>Q6UUV9:CRTC1_HUMAN CREB-regulated transcription coactivator 1 - Homo sapiens (Human)| Length = 634 Score = 32.7 bits (73), Expect = 5.6 Identities = 24/85 (28%), Positives = 32/85 (37%) Frame = -1 Query: 743 KVGVQQGVPEVLHPPAPWQLENLXXXXXXXDTYPVMQPAGGPKLPHAGVDKRIAGPTLPP 564 + G QQ P+ PP P PV P GGP LP A + + P L Sbjct: 357 QAGSQQPPPQPQPPPPPPPASQQPPPPPPPQA-PVRLPPGGPLLPSASLTRGPQPPPLAV 415 Query: 563 DLEVDLIDHPGEEPEMSQEGLLVAA 489 + L P E P G+ +A+ Sbjct: 416 TVPSSLPQSPPENPGQPSMGIDIAS 440
>Q7ZAJ5:XERC_SHEON Tyrosine recombinase xerC - Shewanella oneidensis| Length = 299 Score = 32.3 bits (72), Expect = 7.3 Identities = 23/69 (33%), Positives = 31/69 (44%) Frame = -3 Query: 1071 LSQHERPPQAPTSLTGRPVTWTWLHLAQQWGEGNWNLAQFLQPAAQTRVHPRGGVSIPLV 892 L++ R +P SL+ WL +QWGE FL A ++P G+S P Sbjct: 59 LAKLHRKGLSPRSLS------LWLSAVKQWGE-------FLLRAGAIELNPAKGLSAPKQ 105 Query: 891 ALPAPVAID 865 A P P ID Sbjct: 106 AKPLPKNID 114
>P87179:WSC1_SCHPO Cell wall integrity and stress response component 1 precursor -| Schizosaccharomyces pombe (Fission yeast) Length = 374 Score = 32.3 bits (72), Expect = 7.3 Identities = 27/89 (30%), Positives = 43/89 (48%) Frame = -2 Query: 1054 AASSSHISDRASCNLDLASSSSTMGRG*LEPSSIPAACSTDSGASQGWCIHSVGSLASSG 875 +++++ S +S + +SSSS+ SS ++ S+ S +S S S +SS Sbjct: 147 SSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 206 Query: 874 SHRRTYSPYGSNLYPSNCGLSMRSSSRPS 788 S T S S+ S+ S SSSRPS Sbjct: 207 SVPITSSTSSSHSSSSSSSSSSSSSSRPS 235
>Q90508:VIT1_FUNHE Vitellogenin-1 precursor - Fundulus heteroclitus (Killifish)| (Mummichog) Length = 1704 Score = 32.3 bits (72), Expect = 7.3 Identities = 29/92 (31%), Positives = 40/92 (43%) Frame = -2 Query: 1063 AREAASSSHISDRASCNLDLASSSSTMGRG*LEPSSIPAACSTDSGASQGWCIHSVGSLA 884 AR +SSS S R+ + +SSSS+ S ++ S+ S +S V S Sbjct: 1118 ARTNSSSSSSSRRSRSSSSSSSSSSSSSSSSSSSSRRSSSSSSSSSSSSSRSSRRVNSTR 1177 Query: 883 SSGSHRRTYSPYGSNLYPSNCGLSMRSSSRPS 788 SS S RT S + S+ S SS R S Sbjct: 1178 SSSSSSRTSSASSLASFFSDSSSSSSSSDRRS 1209
>Q2USI0:BST1_ASPOR GPI inositol-deacylase - Aspergillus oryzae| Length = 1102 Score = 32.3 bits (72), Expect = 7.3 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Frame = +1 Query: 1093 WETPRMSHPLPSPKSCSTWKWTVPLATHRRPLVLPGDEQIRW---CLASPLPWSEL 1251 W TP S +P C + +PLA+ R P+ D Q R+ L SP P S L Sbjct: 70 WRTPPSSSMTSNPPDCKSSSVMMPLASQRLPIEASPDHQRRYRPSRLRSPWPCSIL 125
>Q9BXH1:BBC3_HUMAN Bcl-2-binding component 3 - Homo sapiens (Human)| Length = 193 Score = 32.3 bits (72), Expect = 7.3 Identities = 26/55 (47%), Positives = 28/55 (50%), Gaps = 9/55 (16%) Frame = -3 Query: 1155 PLPCAAALGGRQWVAHPRSLPGLP----PFHSLS---QH-ERP-PQAPTSLTGRP 1018 P AALGG +W PRS P P P SLS QH E P P AP +L G P Sbjct: 65 PPAVTAALGGSRWPGGPRSRPRGPRPDGPQPSLSLAEQHLESPVPSAPGALAGGP 119
>Q8S8U2:YCF1_ATRBE Putative membrane protein ycf1 - Atropa belladonna (Belladonna)| (Deadly nightshade) Length = 1880 Score = 32.0 bits (71), Expect = 9.5 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%) Frame = +3 Query: 327 HFGELSVRKVFHQVRMKQL---TWSNESNRDGEEGCSLFLRSIGLREYSRYLAFNHPCSH 497 HF L + R ++L ++ N N +G + S+F ++ +S++L P Sbjct: 1770 HFDLLVPENILWSRRRRELRIRSFFNSLNWNGVDRNSVFCNETNVKNWSQFLDERKPLYK 1829 Query: 498 EKPLLAHLRFFPW 536 EK L L+FF W Sbjct: 1830 EKNELIKLKFFLW 1842
>Q9JMH9:MY18A_MOUSE Myosin-XVIIIa - Mus musculus (Mouse)| Length = 2050 Score = 32.0 bits (71), Expect = 9.5 Identities = 18/54 (33%), Positives = 27/54 (50%) Frame = +3 Query: 948 AGIELGSNYPLPIVELDEAKSRLQDALSEMWELEAASRAEIENGMEEGLGDSSD 1109 AG E Y + E+D K RLQ L + E+E SR ++E + + DS + Sbjct: 1363 AGGEWRLKYERAVREVDFTKKRLQQELEDKMEVEQQSRRQLERRLGDLQADSDE 1416
>P00191:CP21A_BOVIN Cytochrome P450 21 - Bos taurus (Bovine)| Length = 496 Score = 32.0 bits (71), Expect = 9.5 Identities = 19/44 (43%), Positives = 23/44 (52%) Frame = +1 Query: 1270 PQFLKAK*VGRRCHRRCISRLSLGWKAGNKLPATALLPDTTSSI 1401 PQ K V +RC + SL WKA KL +ALL T SS+ Sbjct: 93 PQIPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTRSSM 136 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 374,057,084 Number of extensions: 9181403 Number of successful extensions: 28761 Number of sequences better than 10.0: 70 Number of HSP's gapped: 28620 Number of HSP's successfully gapped: 70 Length of query: 646 Length of database: 100,686,439 Length adjustment: 120 Effective length of query: 526 Effective length of database: 67,771,039 Effective search space: 35647566514 Effective search space used: 35647566514 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
