ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf161e22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1AK103446:Os04g0620700 33 0.14
2AK070420:Os01g0959000 33 0.18
3AK120191:Os11g0603200 32 0.52
4Os06g0732000:Os06g0732000 31 0.68
5AK110223:Os01g0329300 31 0.68
6AK071811:Os02g0773300 31 0.68
7AK108624:Os03g0405100 31 0.89
8AK073983:Os09g0109800 30 1.2
9AK065455:Os09g0109800 30 1.2
10AK059327:Os09g0109800 30 1.2
11Os03g0717300:Os03g0717300 30 1.5
12AK120947: 30 2.0
13AK102608:Os08g0427500 29 2.6
14Os10g0371600:Os10g0371600 28 4.4
15Os03g0640000:Os03g0640000 28 4.4
16Os01g0257500:Os01g0257500 28 4.4
17AK111225: 28 4.4
18AK065123:Os10g0577900 28 4.4
19Os04g0688400:Os04g0688400 28 5.7
20Os11g0587300:Os11g0587300 28 5.8
21Os01g0328100:Os01g0328100 28 5.8
22AK100169:Os06g0486000 28 5.8
23Os10g0457200:Os10g0457200 28 7.5
24AK063699:Os01g0840900 28 7.5
25AK119878: 27 9.8
26AK105412:Os01g0661000 27 9.8
27AK103120:Os09g0453500 27 9.8
28AK101958:Os01g0661000 27 9.8
29AK101627:Os01g0759700 27 9.8
30AK072034:Os01g0759700 27 9.8
31AK063539:Os01g0603200 27 9.8 
>AK103446:Os04g0620700 |
          Length = 707
 Score = 33.5 bits (75), Expect = 0.14
 Identities = 24/79 (30%), Positives = 36/79 (45%)
 Frame = +2

Query: 110 RSPKQVREVHSPEEECQAVGFRLPRPKAMQSSPSSSPVAEDRRHRFDRSRPPPTMQSAPF 289
           +  K VRE   P +E      + P PK ++SS S    +E       +++P  T+Q    
Sbjct: 43  KKQKTVREKVVPSKEEAKKVKKQPPPKKVESSSSEEDSSESEEEV--KAQPKKTVQPKKA 100

Query: 290 APPCCSFSVNDGSDDVTVD 346
           A P    S +D SDD + D
Sbjct: 101 AQPAKEESSDDSSDDSSSD 119
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>AK070420:Os01g0959000 |
          Length = 432

 Score = 33.1 bits (74), Expect = 0.18
 Identities = 21/75 (28%), Positives = 30/75 (40%)
 Frame = +2

Query: 74  ASSPFVVDPSTWRSPKQVREVHSPEEECQAVGFRLPRPKAMQSSPSSSPVAEDRRHRFDR 253
           ASSP    P   +      E  +P  E      R P P+   +SP       +RR    R
Sbjct: 190 ASSPMKAPPPPPKRDVPHNEKGAPSAEKDVQQRREPSPRRKPASPPRKRTPPNRRIESPR 249

Query: 254 SRPPPTMQSAPFAPP 298
            +P P+ +  P +PP
Sbjct: 250 RQPDPSPRRRPDSPP 264
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>AK120191:Os11g0603200 |
          Length = 690

 Score = 31.6 bits (70), Expect = 0.52
 Identities = 15/33 (45%), Positives = 23/33 (69%)
 Frame = -2

Query: 360 LSSLMSTVTSSEPSFTEKEQHGGANGADCMVGG 262
           LSSL+ST TS EPS ++K++   ++GA  +  G
Sbjct: 63  LSSLLSTSTSDEPSSSKKKRSNSSSGASSIPTG 95
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>Os06g0732000:Os06g0732000 |
          Length = 290

 Score = 31.2 bits (69), Expect = 0.68
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
 Frame = +2

Query: 176 LPRPKAMQSSPSSSPVAEDRRHRF----DRSRPPPTMQSAP 286
           +P+P+ +  SPS +  A  RR RF     R RPPP   S P
Sbjct: 8   VPKPRFVSPSPSPAVAATRRRLRFPLAPPRPRPPPLRWSPP 48
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>AK110223:Os01g0329300 |
          Length = 759

 Score = 31.2 bits (69), Expect = 0.68
 Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
 Frame = +2

Query: 77  SSPFVVDPSTWRSPKQVRE---VHSPEEECQAVGFRLPRPKAMQSSPSSSPVAEDRRHRF 247
           + P V  PS    P+        ++P +   A+   +P P AM   PS +PV   +R   
Sbjct: 220 AEPPVPSPSPEHPPRHSPSKPPAYAPAKPPTALRPAIP-PAAMPKPPSVAPVQPPQRPPA 278

Query: 248 DRSRPPPTM--QSAPFAPP 298
             ++PPP+   Q AP  PP
Sbjct: 279 PATKPPPSFPPQLAPTMPP 297
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>AK071811:Os02g0773300 |
          Length = 385

 Score = 31.2 bits (69), Expect = 0.68
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 291 ANGADCMVGGGLERSNRCRRSSATGDEDGLDCIALGRGS 175
           A GADC++  G  +SN CR ++       LDC  + R S
Sbjct: 91  AQGADCVITVGGIQSNHCRATAVAAKYINLDCYLILRTS 129
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>AK108624:Os03g0405100 |
          Length = 323

 Score = 30.8 bits (68), Expect = 0.89
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 185 PKAMQSSPSSSPVAEDRRHRFDRSRPPPTMQSAPFAPP 298
           P A  ++P ++P A  R    + S PPPT  + P  PP
Sbjct: 24  PCASSATPRAAPAALRRFFSAEASTPPPTPPTPPLPPP 61
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>AK073983:Os09g0109800 |
          Length = 532

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 18/47 (38%), Positives = 21/47 (44%)
 Frame = +2

Query: 179 PRPKAMQSSPSSSPVAEDRRHRFDRSRPPPTMQSAPFAPPCCSFSVN 319
           P P     SPS  P A   RHR  ++ P  T    P  PP C FS +
Sbjct: 16  PPPPPRPLSPSFIPSALRHRHRLSQAPPLATSLPRP-RPPWCRFSAS 61
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>AK065455:Os09g0109800 |
          Length = 529

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 18/47 (38%), Positives = 21/47 (44%)
 Frame = +2

Query: 179 PRPKAMQSSPSSSPVAEDRRHRFDRSRPPPTMQSAPFAPPCCSFSVN 319
           P P     SPS  P A   RHR  ++ P  T    P  PP C FS +
Sbjct: 16  PPPPPRPLSPSFIPSALRHRHRLSQAPPLATSLPRP-RPPWCRFSAS 61
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>AK059327:Os09g0109800 |
          Length = 563

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 18/47 (38%), Positives = 21/47 (44%)
 Frame = +2

Query: 179 PRPKAMQSSPSSSPVAEDRRHRFDRSRPPPTMQSAPFAPPCCSFSVN 319
           P P     SPS  P A   RHR  ++ P  T    P  PP C FS +
Sbjct: 16  PPPPPRPLSPSFIPSALRHRHRLSQAPPLATSLPRP-RPPWCRFSAS 61
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>Os03g0717300:Os03g0717300 |
          Length = 160

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +2

Query: 179 PRPKAMQSSPSSSPVAEDRRHRFDRSRPPPTMQSAPFAPPCCS 307
           P P +  S  S+S  +  R     R+ PPP   S P +P  CS
Sbjct: 62  PSPSSASSGSSASSPSGSRAPTSARAPPPPPPTSPPASPSSCS 104
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>AK120947: |
          Length = 723

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 20/70 (28%), Positives = 27/70 (38%)
 Frame = +2

Query: 89  VVDPSTWRSPKQVREVHSPEEECQAVGFRLPRPKAMQSSPSSSPVAEDRRHRFDRSRPPP 268
           V+DP++  +P+  R    P +  +     LP P      P   P     R R     PPP
Sbjct: 4   VIDPASTEAPRARRPPPPPPDSPEGRSPPLPPPP-----PGGPPQPAATRKRSRSPPPPP 58

Query: 269 TMQSAPFAPP 298
              S P  PP
Sbjct: 59  PPPSLPPPPP 68
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>AK102608:Os08g0427500 |
          Length = 880

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 10/64 (15%)
 Frame = -2

Query: 576 NTQVIQASSGSTTC---LGTEIY*KWLKEPKKLQRPYH-------RSHTSVWDSQANPVN 427
           N+Q IQ++S S         E+Y KW  EP +L    +       R    VW  +  P  
Sbjct: 641 NSQSIQSNSNSNEDGLKPTMELYGKWQLEPLQLPHAVNGIVPKNERGQVDVWSEKCLPPG 700

Query: 426 TVHI 415
           TVH+
Sbjct: 701 TVHL 704
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>Os10g0371600:Os10g0371600 |
          Length = 206

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
 Frame = +3

Query: 63  WNRVHRRRSSWTRALGVPPSKSERS---IAPKRSVKPL 167
           W R  RRR    R+ G+PP   E S   I PK    PL
Sbjct: 2   WRRHRRRRQLEARSSGLPPPSPEISGGPIEPKMKTTPL 39
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>Os03g0640000:Os03g0640000 |
          Length = 441

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -1

Query: 331 VRTIVYREGTTRRGEWSRLHGRGRSGAVKSMPAVLG 224
           V   V R+   RRG W+RL   G  GA +S   V G
Sbjct: 138 VAASVGRDWAGRRGRWARLFRGGARGAERSFRRVFG 173
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>Os01g0257500:Os01g0257500 |
          Length = 738

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +2

Query: 194 MQSSPSSSPVAEDRRHRFDRSRPPPTMQSAPFAPPCC 304
           M S   S PV   R H    S PPP + +   +PP C
Sbjct: 1   MDSRRLSFPVDRPRVHSAGLSSPPPLLIATTTSPPAC 37
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>AK111225: |
          Length = 818

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 22/71 (30%), Positives = 27/71 (38%)
 Frame = +2

Query: 74  ASSPFVVDPSTWRSPKQVREVHSPEEECQAVGFRLPRPKAMQSSPSSSPVAEDRRHRFDR 253
           A S F  D  T  S   V   H+P             PK  ++SPSSSP           
Sbjct: 752 AVSRFERDAETHSSVTGVHARHAP-------------PKPAEASPSSSPSPSSSSSTVTP 798

Query: 254 SRPPPTMQSAP 286
              PP+ +SAP
Sbjct: 799 LSAPPSTESAP 809
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>AK065123:Os10g0577900 |
          Length = 427

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = -1

Query: 253 AVKSMPAVLGYRRRGWTRLHRLGAWEPEPNGLTL-LFGAMDLSDLLGGTPSARVHDER 83
           A+   PA L   RRG  RL    AW P   G  +   GA+  S+++G +P     +E+
Sbjct: 16  AILPAPARLCCSRRGALRLEAKAAWRPAARGPRVPAKGAVLASEVVGPSPLLDARNEQ 73
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>Os04g0688400:Os04g0688400 |
          Length = 318

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 75  HRRRSSWTRALGVPPSKSERSIAPKR 152
           HRRR +    + VPP ++ RSIA +R
Sbjct: 36  HRRRVARRHRVAVPPRRANRSIAARR 61
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>Os11g0587300:Os11g0587300 |
          Length = 738

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 25/84 (29%), Positives = 32/84 (38%), Gaps = 2/84 (2%)
 Frame = +2

Query: 83  PFVVDPSTWRSPKQVREVHSPEEECQ--AVGFRLPRPKAMQSSPSSSPVAEDRRHRFDRS 256
           P VV   + R P+      SP    +  A   R PR     +SP+ SP +  RR      
Sbjct: 323 PIVVMRPSSRPPQPPASRTSPTRRVRVDADNARRPRSPDRAASPARSPASPARRGPQSPQ 382

Query: 257 RPPPTMQSAPFAPPCCSFSVNDGS 328
           R     QS  + PP    S  D S
Sbjct: 383 RRVSPAQSPRYQPPLRKPSTGDRS 406
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>Os01g0328100:Os01g0328100 |
          Length = 160

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = +2

Query: 173 RLPRPKAMQSSPSSSPVAEDRRHRFDRSRPPPTMQSAPF 289
           R PRP+  +  P   P A  RR    R RPPP   S+ F
Sbjct: 72  RRPRPRPPRPRPLPPPSANRRR---PRPRPPPLPPSSAF 107
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>AK100169:Os06g0486000 |
          Length = 748

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 17/58 (29%), Positives = 22/58 (37%)
 Frame = +2

Query: 98  PSTWRSPKQVREVHSPEEECQAVGFRLPRPKAMQSSPSSSPVAEDRRHRFDRSRPPPT 271
           P  W  P Q ++ H       +     P P + Q  PSS   A        RS PPP+
Sbjct: 140 PPNWSPPPQQQQQHQSGGSTPSPP---PSPSSNQPPPSSGSSASSSEPSPPRSSPPPS 194
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>Os10g0457200:Os10g0457200 |
          Length = 418

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
 Frame = -2

Query: 345 STVTSSEPSFTEKEQHGGANGADCMVGGGLERSNRCRRSSATGDEDGL-DC-IALGRGSL 172
           S V +S     + +  GG  G  C+ G  ++   RC  +    D   L DC I  GR ++
Sbjct: 86  SKVATSRRRMQKADGGGGGGGGGCLTGNPIDHCWRCAGTDWRQDRQRLADCGIGFGRNAM 145
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>AK063699:Os01g0840900 |
          Length = 151

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 11/44 (25%)
 Frame = -1

Query: 307 GTTRRGEWSRL-----------HGRGRSGAVKSMPAVLGYRRRG 209
           G  RR  W RL           HGRGR+ A +     L + RRG
Sbjct: 108 GARRRRRWRRLVVVDRADADPVHGRGRAAAAQGQDLHLPHARRG 151
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>AK119878: |
          Length = 630

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -2

Query: 192 ALGRGSLNPTA*HSSSGLWTSRTCLGERQVLGSTTNGD 79
           A+G+GS +P A  +S+  W + T         +T++GD
Sbjct: 479 AVGKGSYSPAAPANSTSSWRTTTPAAPAPAASATSSGD 516
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>AK105412:Os01g0661000 |
          Length = 405

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
 Frame = +2

Query: 98  PSTWRSPKQVREVHSPEEECQAVGFRLPRPKAMQSSPSSSPVAEDRRHRFDRSRPPPTM- 274
           P++  +P      HS +   + +  + P P    ++  S P+  D R    R+ PPP   
Sbjct: 50  PASAAAPTTPSPNHSGDPS-RPIPSQAPAPPPPPTADPSPPLPHDNRTPQPRAAPPPAPA 108

Query: 275 --QSAPFAPP 298
             Q AP +PP
Sbjct: 109 PDQPAPPSPP 118
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>AK103120:Os09g0453500 |
          Length = 467

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 7/53 (13%)
 Frame = +2

Query: 161 AVGFRLPRPKAMQSSPSSSPVAEDRRHRFD-------RSRPPPTMQSAPFAPP 298
           A  F  P P+    +P+ +P       +F+       + +PPP  Q+AP A P
Sbjct: 2   AFSFASPAPQNPFQTPAQAPSLSPSPFQFNLQQPQQQQQQPPPQQQAAPAAQP 54
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>AK101958:Os01g0661000 |
          Length = 405

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
 Frame = +2

Query: 98  PSTWRSPKQVREVHSPEEECQAVGFRLPRPKAMQSSPSSSPVAEDRRHRFDRSRPPPTM- 274
           P++  +P      HS +   + +  + P P    ++  S P+  D R    R+ PPP   
Sbjct: 50  PASAAAPTTPSPNHSGDPS-RPIPSQAPAPPPPPTADPSPPLPHDNRTPQPRAAPPPAPA 108

Query: 275 --QSAPFAPP 298
             Q AP +PP
Sbjct: 109 PDQPAPPSPP 118
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>AK101627:Os01g0759700 |
          Length = 195

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
 Frame = +2

Query: 113 SPKQVREVHSPEEECQAVGFRLPRPKAMQSS-PSSSPVAEDRRHRFDRSRPPPTMQSAPF 289
           SP       SP  + +  G   P P A  SS P S P+AED   R   + P P    +P 
Sbjct: 31  SPPAAATSSSPSPQTEGEGSN-PNPNAAASSAPPSPPLAEDPAGRRTLASPYP----SPG 85

Query: 290 APP 298
            PP
Sbjct: 86  LPP 88
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>AK072034:Os01g0759700 |
          Length = 443

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
 Frame = +2

Query: 113 SPKQVREVHSPEEECQAVGFRLPRPKAMQSS-PSSSPVAEDRRHRFDRSRPPPTMQSAPF 289
           SP       SP  + +  G   P P A  SS P S P+AED   R   + P P    +P 
Sbjct: 31  SPPAAATSSSPSPQTEGEGSN-PNPNAAASSAPPSPPLAEDPAGRRTLASPYP----SPG 85

Query: 290 APP 298
            PP
Sbjct: 86  LPP 88
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>AK063539:Os01g0603200 |
          Length = 157

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 16/67 (23%), Positives = 31/67 (46%)
 Frame = +2

Query: 98  PSTWRSPKQVREVHSPEEECQAVGFRLPRPKAMQSSPSSSPVAEDRRHRFDRSRPPPTMQ 277
           P+T  SP+  R  H+  +  +  G +     + +++    P   +RR     ++P PT+ 
Sbjct: 92  PTTPMSPRLTRSTHTSRKARRGRGEQRTHAGSAENA-LVGPFDTNRRRHAGGTQPSPTLP 150

Query: 278 SAPFAPP 298
           + P  PP
Sbjct: 151 TPPPPPP 157


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 20,496,754
Number of extensions: 519383
Number of successful extensions: 2280
Number of sequences better than 10.0: 31
Number of HSP's gapped: 2266
Number of HSP's successfully gapped: 31
Length of query: 227
Length of database: 15,399,855
Length adjustment: 97
Effective length of query: 130
Effective length of database: 11,515,878
Effective search space: 1497064140
Effective search space used: 1497064140
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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