| Clone Name | FLbaf161e22 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M35330.1|WHTREPTB T.monococcum aegilopoides repetitive DNA sequence, clone pTbUCD2 Length = 273 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Plus Query: 560 tgtatgacttgagtgttggatcatgtgacccct 592 |||||||||||||||| || ||||||||||||| Sbjct: 101 tgtatgacttgagtgtcgggtcatgtgacccct 133
>gb|AC161537.7| Mus musculus chromosome 15, clone RP23-471J11, complete sequence Length = 188471 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Plus Query: 523 ttctgtacccagacatgttgtgct 546 |||||||||||||||||||||||| Sbjct: 87163 ttctgtacccagacatgttgtgct 87186
>gb|AC182767.3| Pan troglodytes BAC clone CH251-283B24 from chromosome 7, complete sequence Length = 155153 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 290 gcccctccgtgttgttccttctc 312 ||||||||||||||||||||||| Sbjct: 19223 gcccctccgtgttgttccttctc 19201
>gb|AC093136.3| Pan troglodytes clone RP43-116L11, complete sequence Length = 179629 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 290 gcccctccgtgttgttccttctc 312 ||||||||||||||||||||||| Sbjct: 28722 gcccctccgtgttgttccttctc 28744
>gb|AC006153.2| Homo sapiens BAC clone RP11-120J2 from 7, complete sequence Length = 89678 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Minus Query: 343 tgacattaatgaagagaggtac 364 |||||||||||||||||||||| Sbjct: 45130 tgacattaatgaagagaggtac 45109
>gb|CP000481.1| Acidothermus cellulolyticus 11B, complete genome Length = 2443540 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 tcgagtccatcctcgtcgccg 220 ||||||||||||||||||||| Sbjct: 660057 tcgagtccatcctcgtcgccg 660077 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 tcgagtccatcctcgtcgccg 220 ||||||||||||||||||||| Sbjct: 667257 tcgagtccatcctcgtcgccg 667277
>gb|AC183776.2| Pan troglodytes BAC clone CH251-246H3 from chromosome 7, complete sequence Length = 160056 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 343 tgacattaatgaagagaggta 363 ||||||||||||||||||||| Sbjct: 13291 tgacattaatgaagagaggta 13311
>ref|XM_617538.2| PREDICTED: Bos taurus similar to Ryanodine receptor 2 (Cardiac muscle-type ryanodine receptor) (RyR2) (RYR-2) (Cardiac muscle ryanodine receptor-calcium release channel) (hRYR-2) (LOC537376), partial mRNA Length = 13866 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 494 ttaggctctttcagccatttt 514 ||||||||||||||||||||| Sbjct: 9188 ttaggctctttcagccatttt 9168
>gb|AC147087.3| Pan troglodytes BAC clone RP43-59E13 from 7, complete sequence Length = 130280 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 343 tgacattaatgaagagaggta 363 ||||||||||||||||||||| Sbjct: 2219 tgacattaatgaagagaggta 2239
>gb|AY522382.1| Secale cereale clone 16 tandem repeat region Length = 984 Score = 42.1 bits (21), Expect = 2.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 560 tgtatgacttgagtgttggatcatgtgacccct 592 ||||||||||| ||||||| ||||| ||||||| Sbjct: 287 tgtatgacttgtgtgttgggtcatgggacccct 319
>gb|AC161287.2| Pan troglodytes BAC clone CH251-267A11 from chromosome 7, complete sequence Length = 166684 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 343 tgacattaatgaagagaggta 363 ||||||||||||||||||||| Sbjct: 44130 tgacattaatgaagagaggta 44110 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 92,306,767 Number of extensions: 4538967 Number of successful extensions: 78474 Number of sequences better than 10.0: 11 Number of HSP's gapped: 78474 Number of HSP's successfully gapped: 12 Length of query: 682 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 660 Effective length of database: 18,508,616,841 Effective search space: 12215687115060 Effective search space used: 12215687115060 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)