ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf161e21 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK106287:Os02g0108100 | 29 | 1.8 | 2 | Os02g0133500:Os02g0133500 | 28 | 2.3 | 3 | Os05g0437100:Os05g0437100 | 28 | 4.0 | 4 | D49713:Os07g0141400 | 28 | 4.0 | 5 | AK104722:Os07g0141400 | 28 | 4.0 | 6 | AK065248:Os07g0141400 | 28 | 4.0 | 7 | AF052203:Os07g0141400 | 28 | 4.0 | 8 | AF022732:Os07g0141400 | 28 | 4.0 | 9 | AK108072:Os02g0745400 | 27 | 5.2 | 10 | AK072229:Os02g0745400 | 27 | 5.2 | 11 | Os02g0657100:Os02g0657100 | 27 | 5.3 | 12 | Os02g0330000:Os02g0330000 | 27 | 6.8 | 13 | AK099385:Os12g0481100 | 27 | 6.8 | 14 | AK073151:Os12g0481100 | 27 | 6.8 | 15 | Os12g0450200:Os12g0450200 | 27 | 9.0 | 16 | AK108933:Os05g0112200 | 27 | 9.0 | 17 | AK104437:Os02g0324700 | 27 | 9.0 | 18 | AK069586:Os03g0267800 | 27 | 9.0 | 19 | AK064996:Os03g0363500 | 27 | 9.0 | 20 | AK060405:Os02g0324700 | 27 | 9.0 |
|---|
>AK106287:Os02g0108100 | Length = 390 Score = 28.9 bits (63), Expect = 1.8 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 6/59 (10%) Frame = -2 Query: 180 SLDAQRLHRTRSALHVARRRGLALPADRTVGSAAQ------RPEVAALHGEAAQCASAP 22 S + L R + +RRG LP D VG A + RP + LHG A + + P Sbjct: 25 STSGELLRRGQWRRRGPKRRGNELPGDTEVGDAERRAWTTTRPSLTRLHGGARRRTARP 83
>Os02g0133500:Os02g0133500 | Length = 1033 Score = 28.5 bits (62), Expect = 2.3 Identities = 16/48 (33%), Positives = 23/48 (47%) Frame = +3 Query: 96 SCQPGGQGPVVALRAGHYAFDGVVVRRGNSAASDAASERWRTPSSPNA 239 S PGG+GPV F V VRR +A++ + P +P+A Sbjct: 415 SSTPGGRGPVPPPGPSVVPFPRVYVRRSRTASTSEPATAPAAPVAPDA 462
>Os05g0437100:Os05g0437100 | Length = 364 Score = 27.7 bits (60), Expect = 4.0 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = -2 Query: 114 ALPADRTVGSAAQRPEVAALHGEAAQCASAPSGVQWT 4 ++P+ + S++ A HGEA Q S P G WT Sbjct: 305 SVPSSSSAASSSSGYGAPAEHGEAVQWTSWPDGGGWT 341
>D49713:Os07g0141400 | Length = 254 Score = 27.7 bits (60), Expect = 4.0 Identities = 21/60 (35%), Positives = 25/60 (41%) Frame = -2 Query: 201 PHPTRRYSLDAQRLHRTRSALHVARRRGLALPADRTVGSAAQRPEVAALHGEAAQCASAP 22 P P R L R + A V+RR LAL A T + AA +GEAA P Sbjct: 22 PSPATRTHLLVCRAQKQDDA-DVSRRAALALLAGATAAVGVKVAPAAAAYGEAANVFGKP 80
>AK104722:Os07g0141400 | Length = 254 Score = 27.7 bits (60), Expect = 4.0 Identities = 21/60 (35%), Positives = 25/60 (41%) Frame = -2 Query: 201 PHPTRRYSLDAQRLHRTRSALHVARRRGLALPADRTVGSAAQRPEVAALHGEAAQCASAP 22 P P R L R + A V+RR LAL A T + AA +GEAA P Sbjct: 22 PSPATRTHLLVCRAQKQDDA-DVSRRAALALLAGATAAVGVKVAPAAAAYGEAANVFGKP 80
>AK065248:Os07g0141400 | Length = 254 Score = 27.7 bits (60), Expect = 4.0 Identities = 21/60 (35%), Positives = 25/60 (41%) Frame = -2 Query: 201 PHPTRRYSLDAQRLHRTRSALHVARRRGLALPADRTVGSAAQRPEVAALHGEAAQCASAP 22 P P R L R + A V+RR LAL A T + AA +GEAA P Sbjct: 22 PSPATRTHLLVCRAQKQDDA-DVSRRAALALLAGATAAVGVKVAPAAAAYGEAANVFGKP 80
>AF052203:Os07g0141400 | Length = 254 Score = 27.7 bits (60), Expect = 4.0 Identities = 21/60 (35%), Positives = 25/60 (41%) Frame = -2 Query: 201 PHPTRRYSLDAQRLHRTRSALHVARRRGLALPADRTVGSAAQRPEVAALHGEAAQCASAP 22 P P R L R + A V+RR LAL A T + AA +GEAA P Sbjct: 22 PSPATRTHLLVCRAQKQDDA-DVSRRAALALLAGATAAVGVKVAPAAAAYGEAANVFGKP 80
>AF022732:Os07g0141400 | Length = 254 Score = 27.7 bits (60), Expect = 4.0 Identities = 21/60 (35%), Positives = 25/60 (41%) Frame = -2 Query: 201 PHPTRRYSLDAQRLHRTRSALHVARRRGLALPADRTVGSAAQRPEVAALHGEAAQCASAP 22 P P R L R + A V+RR LAL A T + AA +GEAA P Sbjct: 22 PSPATRTHLLVCRAQKQDDA-DVSRRAALALLAGATAAVGVKVAPAAAAYGEAANVFGKP 80
>AK108072:Os02g0745400 | Length = 493 Score = 27.3 bits (59), Expect = 5.2 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Frame = -3 Query: 314 SISAAAALPIRLVSLSWQESTEMP-LGVWRRRRPPPLGCRIRRGAI 180 S + AAA P R V +P VW RRPPPLG ++ A+ Sbjct: 224 SAARAAAEPARHVFHVVTAPMYLPAFRVWFARRPPPLGTHVQLLAV 269
>AK072229:Os02g0745400 | Length = 493 Score = 27.3 bits (59), Expect = 5.2 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Frame = -3 Query: 314 SISAAAALPIRLVSLSWQESTEMP-LGVWRRRRPPPLGCRIRRGAI 180 S + AAA P R V +P VW RRPPPLG ++ A+ Sbjct: 224 SAARAAAEPARHVFHVVTAPMYLPAFRVWFARRPPPLGTHVQLLAV 269
>Os02g0657100:Os02g0657100 | Length = 264 Score = 27.3 bits (59), Expect = 5.3 Identities = 13/31 (41%), Positives = 15/31 (48%) Frame = +2 Query: 11 WTPLGALAHCAASPWRAATSGRCAALPTVLS 103 WT LGA S W + RCAA P + S Sbjct: 121 WTSLGAAVAGRGSSWARSGKLRCAARPLMAS 151
>Os02g0330000:Os02g0330000 | Length = 367 Score = 26.9 bits (58), Expect = 6.8 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = -3 Query: 233 WRRRRPPPLGCRIRRGAIPSTHN-DSIERVV 144 W+RRRPPP ++ A P H D ++R + Sbjct: 175 WQRRRPPPCVVELQLHARPRGHRLDHLQRAL 205
>AK099385:Os12g0481100 | Length = 833 Score = 26.9 bits (58), Expect = 6.8 Identities = 19/50 (38%), Positives = 21/50 (42%) Frame = -3 Query: 245 PLGVWRRRRPPPLGCRIRRGAIPSTHNDSIERVVPCT*RDDGALPSRLTG 96 P RRRRPPP R + S D+ R P DDGA S G Sbjct: 6 PPAAARRRRPPPPPTPAARRLLLSRGMDADFRFDPDGSDDDGAAASAAAG 55
>AK073151:Os12g0481100 | Length = 832 Score = 26.9 bits (58), Expect = 6.8 Identities = 19/50 (38%), Positives = 21/50 (42%) Frame = -3 Query: 245 PLGVWRRRRPPPLGCRIRRGAIPSTHNDSIERVVPCT*RDDGALPSRLTG 96 P RRRRPPP R + S D+ R P DDGA S G Sbjct: 5 PPAAARRRRPPPPPTPAARRLLLSRGMDADFRFDPDGSDDDGAAASAAAG 54
>Os12g0450200:Os12g0450200 | Length = 3154 Score = 26.6 bits (57), Expect = 9.0 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +2 Query: 26 ALAHCAASPWRAATSGRCAALPTVLS 103 AL C PW A+ GR PT+LS Sbjct: 1929 ALYICGRDPWAVASLGRDQCRPTLLS 1954
>AK108933:Os05g0112200 | Length = 290 Score = 26.6 bits (57), Expect = 9.0 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = +1 Query: 31 GALRCLPMEGRDLGSLRRAADRPVSREGKAPSSRYVQGTT 150 GALR +P+ G +RA +P S G A ++ G+T Sbjct: 78 GALRNVPVGGGYRRHAKRAKPKPASAAGSASAATTTAGST 117
>AK104437:Os02g0324700 | Length = 152 Score = 26.6 bits (57), Expect = 9.0 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = +1 Query: 31 GALRCLPMEGRDLGSLRRAADRPVSREGKAP 123 G LR L EG + L RAA R +REG+ P Sbjct: 36 GPLRFLIDEGETVAGLIRAALRCYAREGRMP 66
>AK069586:Os03g0267800 | Length = 501 Score = 26.6 bits (57), Expect = 9.0 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = -2 Query: 186 RYSLDAQRLHRTRSALHVARRRGLALPADRTVGSAAQRPEVAA 58 R +L+ ++ H+ RGL L ++TV S +RP + A Sbjct: 298 RQALNEAMEGESKGPHHMPETRGLCLSEEQTVTSILRRPRIGA 340
>AK064996:Os03g0363500 | Length = 533 Score = 26.6 bits (57), Expect = 9.0 Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 3/61 (4%) Frame = -2 Query: 189 RRYSLDAQRLHRTRSALHVARRRGLALPADRTVGSAAQRPEVAALHGEAA---QCASAPS 19 R + A+R+H SA ARRR A RP AA G AA Q +AP Sbjct: 38 RNHRRPARRVHCAASASAAARRRD---------ACCALRPPAAARGGAAAAQGQAGAAPH 88 Query: 18 G 16 G Sbjct: 89 G 89
>AK060405:Os02g0324700 | Length = 152 Score = 26.6 bits (57), Expect = 9.0 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = +1 Query: 31 GALRCLPMEGRDLGSLRRAADRPVSREGKAP 123 G LR L EG + L RAA R +REG+ P Sbjct: 36 GPLRFLIDEGETVAGLIRAALRCYAREGRMP 66 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 11,214,953 Number of extensions: 219034 Number of successful extensions: 1008 Number of sequences better than 10.0: 20 Number of HSP's gapped: 1006 Number of HSP's successfully gapped: 20 Length of query: 162 Length of database: 15,399,855 Length adjustment: 93 Effective length of query: 69 Effective length of database: 11,676,042 Effective search space: 805646898 Effective search space used: 805646898 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
