ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf157a18 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK060476:Os01g0773700 | 33 | 0.26 | 2 | AK060438:Os01g0773700 | 33 | 0.26 | 3 | AK100409:Os02g0259100 | 32 | 0.58 | 4 | Os05g0355200:Os05g0355200 | 31 | 1.7 | 5 | AK109477:Os02g0645600 | 30 | 3.7 | 6 | AK105763:Os02g0575700 | 29 | 4.9 | 7 | Os02g0132200:Os02g0132200 | 29 | 6.4 | 8 | AK107940:Os08g0482300 | 29 | 6.4 | 9 | AK103326:Os01g0111900 | 29 | 6.4 | 10 | AK062325:Os05g0420000 | 29 | 6.4 | 11 | AK110013: | 29 | 6.4 | 12 | AK119245:Os06g0523100 | 29 | 6.4 | 13 | AK105107:Os06g0523100 | 29 | 6.4 | 14 | AK062190:Os06g0523100 | 29 | 6.4 | 15 | Os02g0599800:Os02g0599800 | 28 | 8.3 | 16 | AK110575:Os02g0744800 | 28 | 8.3 | 17 | AK109924:Os11g0538400 | 28 | 8.3 | 18 | AK063426:Os07g0627300 | 28 | 8.3 | 19 | AK062582:Os04g0640900 | 28 | 8.4 |
|---|
>AK060476:Os01g0773700 | Length = 173 Score = 33.5 bits (75), Expect = 0.26 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Frame = +2 Query: 59 DGSPAATPRIRQQPSCI--CATARRHVVT*HYRVLQPAAARPVDVPHPVERPAPCR*HHA 232 DG A PR QQP+ + R H+V H+ L+P R V P +E C+ H Sbjct: 100 DGGHRAQPRAEQQPAGVDPARGVRPHLVALHHLHLRPRGGRGVRRPLALESLYTCK-HGG 158 Query: 233 ATRC 244 RC Sbjct: 159 CERC 162
>AK060438:Os01g0773700 | Length = 186 Score = 33.5 bits (75), Expect = 0.26 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Frame = +2 Query: 59 DGSPAATPRIRQQPSCI--CATARRHVVT*HYRVLQPAAARPVDVPHPVERPAPCR*HHA 232 DG A PR QQP+ + R H+V H+ L+P R V P +E C+ H Sbjct: 100 DGGHRAQPRAEQQPAGVDPARGVRPHLVALHHLHLRPRGGRGVRRPLALESLYTCK-HGG 158 Query: 233 ATRC 244 RC Sbjct: 159 CERC 162
>AK100409:Os02g0259100 | Length = 631 Score = 32.3 bits (72), Expect = 0.58 Identities = 33/117 (28%), Positives = 44/117 (37%), Gaps = 21/117 (17%) Frame = -1 Query: 291 HGGIVDPAHQ*CRPSTQRVAAWCHRHGAGR---STGC------GTSTGLAAAGCKTR*CY 139 HGG H C+ + A+C HG G+ + GC GT +A G K C Sbjct: 388 HGGGKRCTHPDCKKGAEGSTAFCKGHGGGKRCSAEGCTKSVHGGTLCCVAHGGGKR--CV 445 Query: 138 VTTCLRAVAQMHDGC--------CRMRGVAAGLPSAQGSA----LRRGGGLCVQGEQ 4 V C ++ D C C+ G SAQGS GG C+ G + Sbjct: 446 VEGCTKSARGRTDRCVGHGGGKRCQSSGCD---KSAQGSTNFCKAHGGGKRCLWGHE 499
>Os05g0355200:Os05g0355200 | Length = 632 Score = 30.8 bits (68), Expect = 1.7 Identities = 24/83 (28%), Positives = 31/83 (37%) Frame = +3 Query: 9 PLVHRGHRRAGGRCLGPMGAPPPHLASGSSRRASVLLHVDXXXXXXXXXXXXXPQDPLMC 188 PL HR R P PPPHL S ++ + LL D + Sbjct: 77 PLPHRPPPR-------PSPLPPPHLTSAAAAASLPLLSPLACGARCVSTCSASDGDEVEG 129 Query: 189 HIQSSAPRHADDTTPPHAALRVC 257 + +P HAD + P H RVC Sbjct: 130 EGEGGSPAHADSSHPEHVG-RVC 151
>AK109477:Os02g0645600 | Length = 387 Score = 29.6 bits (65), Expect = 3.7 Identities = 34/143 (23%), Positives = 54/143 (37%), Gaps = 14/143 (9%) Frame = -3 Query: 496 TTRHMAIATSTSCGSTAP--PTQRRHGFNASVQLDLVDSQIGERTKGH------------ 359 +T + AT++SC S+A P + F A V DL+D Q + H Sbjct: 218 STSSSSTATTSSCSSSASFSPFLQYVDFPALVASDLLDEQPRSKKSKHGKNGKQKPKKRG 277 Query: 358 QSPILHRFKYFVAFSPVADSTPAWWHRRPGTPVMQTLNAACGGVVSSAWRGALDWMWHIN 179 + P + + A + + PA RR + CG + WR + + Sbjct: 278 RKPKHQQPPHLAAAAGGGAALPATGDRRC---------SHCGVQKTPQWRAGPEGAKTLC 328 Query: 178 GSCGRRLQDAVVLRYYVSTCSST 110 +CG R + +L Y CS T Sbjct: 329 NACGVRYKSGRLLPEYRPACSPT 351
>AK105763:Os02g0575700 | Length = 655 Score = 29.3 bits (64), Expect = 4.9 Identities = 33/118 (27%), Positives = 43/118 (36%), Gaps = 25/118 (21%) Frame = -1 Query: 297 LLHGGIVDPAHQ*CRPSTQRVAAWCHRHGAGRS---TGCGTS----TGLAAAGCKTR*CY 139 + HGG HQ C + + + C +HG G+ GC S GL + R C Sbjct: 331 IAHGGGRRCGHQGCPKAARGKSGRCIKHGGGKRCSVEGCIRSAEGRVGLCISHGGGRRCQ 390 Query: 138 VTTCLRAVAQ---------------MHDGCCRMRGVAAGLPSAQGSALR---RGGGLC 19 C R AQ + DGC + + L A G R GGGLC Sbjct: 391 YPDC-RKGAQGSTLYCKAHGGGKRCVFDGCLKGAEGSTPLCKAHGGGKRCMFEGGGLC 447
>Os02g0132200:Os02g0132200 | Length = 555 Score = 28.9 bits (63), Expect = 6.4 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 2/42 (4%) Frame = -3 Query: 565 AGLRQGSHPRWRDEAGERQRETTTTRHM--AIATSTSCGSTA 446 AGLR S P + TTTT+ + A+A SCGS A Sbjct: 4 AGLRVASDPAGSGASSPPPPPTTTTKELGRAVAAEASCGSRA 45
>AK107940:Os08g0482300 | Length = 146 Score = 28.9 bits (63), Expect = 6.4 Identities = 19/50 (38%), Positives = 21/50 (42%) Frame = +2 Query: 65 SPAATPRIRQQPSCICATARRHVVT*HYRVLQPAAARPVDVPHPVERPAP 214 S + TP + QP R V V PAA PV P PV PAP Sbjct: 25 SASPTPAPKAQPPVATPPTRPPAVA---PVSPPAAQPPVTTPPPVSAPAP 71
>AK103326:Os01g0111900 | Length = 212 Score = 28.9 bits (63), Expect = 6.4 Identities = 17/36 (47%), Positives = 18/36 (50%) Frame = -3 Query: 118 SSTDARRLLPDARCGGGAPIGPRQRPPARRWPLCTR 11 SS+ R P A C AP R R PARR P C R Sbjct: 46 SSSATTRSAPRAACP--APAARRARTPARRRPTCCR 79
>AK062325:Os05g0420000 | Length = 151 Score = 28.9 bits (63), Expect = 6.4 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = +3 Query: 3 AAPLVHRGHRRAGGRCLGPMGAPPPHLASGSSRRAS 110 A P V R GGR + +PP LA GS RR + Sbjct: 14 ALPSVGSSWRGGGGRRVAAAPSPPSDLAGGSGRRVA 49
>AK110013: | Length = 733 Score = 28.9 bits (63), Expect = 6.4 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Frame = +1 Query: 604 PYKSYPRTTPHKGQDP*SVSTELRSPHRPVGNG----SSTIQSETSIRRTSN 747 PY + PRT+P K + T L+ P + NG SST SE RR S+ Sbjct: 71 PYSNTPRTSPRKRPSTDAPGTGLQPP-TDIANGGSSSSSTTHSEGRERRRSD 121
>AK119245:Os06g0523100 | Length = 451 Score = 28.9 bits (63), Expect = 6.4 Identities = 26/106 (24%), Positives = 35/106 (33%), Gaps = 15/106 (14%) Frame = -1 Query: 297 LLHGGIVDPAHQ*CRPSTQRVAAWCHRHGAGR-------STGCGTSTGLAAAGCKTR*CY 139 + HGG H C Q +C HG G+ S G ST L A + C Sbjct: 189 IAHGGGRRCKHDGCTKGAQGSTNFCKAHGGGKRCTHPNCSKGAEGSTALCKAHGGGKRCS 248 Query: 138 VTTCLRAVAQMHDGC--------CRMRGVAAGLPSAQGSALRRGGG 25 C ++V + C C + G +R GGG Sbjct: 249 AEGCPKSVHGGTEFCVAHGGGKRCVVPGCTKSARGRTDCCVRHGGG 294 Score = 28.9 bits (63), Expect = 6.4 Identities = 27/99 (27%), Positives = 34/99 (34%), Gaps = 8/99 (8%) Frame = -1 Query: 291 HGGIVDPAHQ*CRPSTQRVAAWCHRHGAGRST---GCGTSTGLAAAGCKTR*-----CYV 136 HGG + + C S +C HG G+ GC T + C R C Sbjct: 241 HGGGKRCSAEGCPKSVHGGTEFCVAHGGGKRCVVPGC-TKSARGRTDCCVRHGGGKRCQF 299 Query: 135 TTCLRAVAQMHDGCCRMRGVAAGLPSAQGSALRRGGGLC 19 T C ++ D C G L GS L G G C Sbjct: 300 TGCSKSAQGSTDFCKAHGGGKRCLWGQSGSGLGDGSGTC 338
>AK105107:Os06g0523100 | Length = 451 Score = 28.9 bits (63), Expect = 6.4 Identities = 26/106 (24%), Positives = 35/106 (33%), Gaps = 15/106 (14%) Frame = -1 Query: 297 LLHGGIVDPAHQ*CRPSTQRVAAWCHRHGAGR-------STGCGTSTGLAAAGCKTR*CY 139 + HGG H C Q +C HG G+ S G ST L A + C Sbjct: 189 IAHGGGRRCKHDGCTKGAQGSTNFCKAHGGGKRCTHPNCSKGAEGSTALCKAHGGGKRCS 248 Query: 138 VTTCLRAVAQMHDGC--------CRMRGVAAGLPSAQGSALRRGGG 25 C ++V + C C + G +R GGG Sbjct: 249 AEGCPKSVHGGTEFCVAHGGGKRCVVPGCTKSARGRTDCCVRHGGG 294 Score = 28.9 bits (63), Expect = 6.4 Identities = 27/99 (27%), Positives = 34/99 (34%), Gaps = 8/99 (8%) Frame = -1 Query: 291 HGGIVDPAHQ*CRPSTQRVAAWCHRHGAGRST---GCGTSTGLAAAGCKTR*-----CYV 136 HGG + + C S +C HG G+ GC T + C R C Sbjct: 241 HGGGKRCSAEGCPKSVHGGTEFCVAHGGGKRCVVPGC-TKSARGRTDCCVRHGGGKRCQF 299 Query: 135 TTCLRAVAQMHDGCCRMRGVAAGLPSAQGSALRRGGGLC 19 T C ++ D C G L GS L G G C Sbjct: 300 TGCSKSAQGSTDFCKAHGGGKRCLWGQSGSGLGDGSGTC 338
>AK062190:Os06g0523100 | Length = 496 Score = 28.9 bits (63), Expect = 6.4 Identities = 26/106 (24%), Positives = 35/106 (33%), Gaps = 15/106 (14%) Frame = -1 Query: 297 LLHGGIVDPAHQ*CRPSTQRVAAWCHRHGAGR-------STGCGTSTGLAAAGCKTR*CY 139 + HGG H C Q +C HG G+ S G ST L A + C Sbjct: 234 IAHGGGRRCKHDGCTKGAQGSTNFCKAHGGGKRCTHPNCSKGAEGSTALCKAHGGGKRCS 293 Query: 138 VTTCLRAVAQMHDGC--------CRMRGVAAGLPSAQGSALRRGGG 25 C ++V + C C + G +R GGG Sbjct: 294 AEGCPKSVHGGTEFCVAHGGGKRCVVPGCTKSARGRTDCCVRHGGG 339 Score = 28.9 bits (63), Expect = 6.4 Identities = 27/99 (27%), Positives = 34/99 (34%), Gaps = 8/99 (8%) Frame = -1 Query: 291 HGGIVDPAHQ*CRPSTQRVAAWCHRHGAGRST---GCGTSTGLAAAGCKTR*-----CYV 136 HGG + + C S +C HG G+ GC T + C R C Sbjct: 286 HGGGKRCSAEGCPKSVHGGTEFCVAHGGGKRCVVPGC-TKSARGRTDCCVRHGGGKRCQF 344 Query: 135 TTCLRAVAQMHDGCCRMRGVAAGLPSAQGSALRRGGGLC 19 T C ++ D C G L GS L G G C Sbjct: 345 TGCSKSAQGSTDFCKAHGGGKRCLWGQSGSGLGDGSGTC 383
>Os02g0599800:Os02g0599800 | Length = 654 Score = 28.5 bits (62), Expect = 8.3 Identities = 25/94 (26%), Positives = 37/94 (39%), Gaps = 4/94 (4%) Frame = -3 Query: 301 STPAWWHRRPGTPVMQTLNAACGGVVSSAWRGALDWMWHINGSCGRRLQDAVVLRYYVST 122 S+P+W + GT V ++ G G L +W NG G+R DA Sbjct: 72 SSPSWTSKLSGTVVNRSGATGTGVGEEEGKSGELALVWRQNGRGGQR-GDARAGETASGA 130 Query: 121 CSSTDAR----RLLPDARCGGGAPIGPRQRPPAR 32 + R R + DA GGG + +R +R Sbjct: 131 AVERERRPRPHRHMRDAPAGGGEEVAEARRSDSR 164
>AK110575:Os02g0744800 | Length = 123 Score = 28.5 bits (62), Expect = 8.3 Identities = 10/22 (45%), Positives = 12/22 (54%) Frame = -3 Query: 301 STPAWWHRRPGTPVMQTLNAAC 236 STP WW RP P+ T + C Sbjct: 80 STPFWWSSRPMNPISGTSSRTC 101
>AK109924:Os11g0538400 | Length = 610 Score = 28.5 bits (62), Expect = 8.3 Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 4/28 (14%) Frame = -3 Query: 103 RRLLP----DARCGGGAPIGPRQRPPAR 32 RRLLP +A GG +GP RPPAR Sbjct: 558 RRLLPRRPAEALAGGPRRVGPPPRPPAR 585
>AK063426:Os07g0627300 | Length = 538 Score = 28.5 bits (62), Expect = 8.3 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 5/49 (10%) Frame = -3 Query: 172 CGRRLQDAVVLRYYVSTCSSTDARRLLPDARC-----GGGAPIGPRQRP 41 C RR +D + + S CSST ++R L C G AP + RP Sbjct: 127 CKRRAKDDELFKENGSLCSSTSSKRALVQTGCLTSGASGSAPPIKQMRP 175
>AK062582:Os04g0640900 | Length = 637 Score = 28.5 bits (62), Expect = 8.4 Identities = 26/104 (25%), Positives = 33/104 (31%), Gaps = 15/104 (14%) Frame = -1 Query: 291 HGGIVDPAHQ*CRPSTQRVAAWCHRHGAGR---STGCGTS----TGLAAAGCKTR*CYVT 133 HGG C + A+C HG G+ GC S T A R C Sbjct: 255 HGGGQRCQKPGCNKGAESRTAYCKSHGGGKRCQELGCTKSAEGKTEFCIAHGGGRRCGTP 314 Query: 132 TCLRAVAQMHDGC--------CRMRGVAAGLPSAQGSALRRGGG 25 C +A C CR+ G + G + GGG Sbjct: 315 GCTKAARGRSGFCIKHGGGKRCRVEGCSRSAEGQFGLCISHGGG 358 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 37,706,368 Number of extensions: 1036896 Number of successful extensions: 3694 Number of sequences better than 10.0: 19 Number of HSP's gapped: 3672 Number of HSP's successfully gapped: 22 Length of query: 353 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 251 Effective length of database: 11,315,673 Effective search space: 2840233923 Effective search space used: 2840233923 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
