Clone Information

BLAST Search Result

Clone Name	FLbaf160p07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	dbj\|AK073064.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	82	5e-12
2	emb\|CR855148.1\| Oryza sativa genomic DNA, chromosome 4, BAC clon...	74	1e-09
3	ref\|NM_001059407.1\| Oryza sativa (japonica cultivar-group) Os04g...	74	1e-09
4	dbj\|AP008210.1\| Oryza sativa (japonica cultivar-group) genomic D...	74	1e-09
5	dbj\|AK102407.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	74	1e-09
6	dbj\|AK101691.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	74	1e-09
7	emb\|AL606452.2\|OSJN00007 Oryza sativa genomic DNA, chromosome 4,...	74	1e-09
8	gb\|AY106057.1\| Zea mays PCO097918 mRNA sequence	48	0.071
9	emb\|BX510942.5\| Zebrafish DNA sequence from clone CH211-246H5, c...	46	0.28
10	ref\|XM_001148182.1\| PREDICTED: Pan troglodytes similar to GMCL2 ...	44	1.1
11	gb\|DQ894025.1\| Homo sapiens clone FLH166642.01L; RZPDo839B0987D ...	44	1.1
12	gb\|DQ894023.1\| Homo sapiens clone FLH166629.01L; RZPDo839B0787D ...	44	1.1
13	gb\|DQ890867.1\| Synthetic construct Homo sapiens clone FLH166633....	44	1.1
14	gb\|AE014297.2\| Drosophila melanogaster chromosome 3R, complete s...	44	1.1
15	ref\|XM_001095683.1\| PREDICTED: Macaca mulatta germ cell-less hom...	44	1.1
16	gb\|AC150554.1\| Drosophila melanogaster clone BACR21O10, complete...	44	1.1
17	gb\|BC033886.2\| Homo sapiens germ cell-less homolog 1 (Drosophila...	44	1.1
18	gb\|BC024185.1\| Homo sapiens germ cell-less homolog 1 (Drosophila...	44	1.1
19	gb\|BC024184.2\| Homo sapiens germ cell-less homolog 1 (Drosophila...	44	1.1
20	gb\|AC103749.2\| Homo sapiens chromosome 15, clone RP11-4F5, compl...	44	1.1
21	gb\|AC010299.8\| Homo sapiens chromosome 5 clone CTB-174J2, comple...	44	1.1
22	dbj\|AB168490.1\| Macaca fascicularis testis cDNA clone: QtsA-1252...	44	1.1
23	gb\|AC091821.3\| Homo sapiens chromosome 5 clone CTC-325G23, compl...	44	1.1
24	emb\|BX465199.9\| Zebrafish DNA sequence from clone DKEY-84I7 in l...	44	1.1
25	gb\|AC136632.3\| Homo sapiens chromosome 5 clone RP11-889L3, compl...	44	1.1
26	gb\|AC009848.9\|AC009848 Drosophila melanogaster, chromosome 3R, r...	44	1.1
27	gb\|AC008216.3\|AC008216 Drosophila melanogaster, chromosome 3R, r...	44	1.1
28	gb\|AC136601.2\| Homo sapiens chromosome 5 clone RP11-1259L22, com...	44	1.1
29	dbj\|AP001970.3\| Homo sapiens genomic DNA, chromosome 11q, clone:...	44	1.1
30	gb\|AY814503.1\| Schistosoma japonicum clone SJCHGC00012 unknown mRNA	44	1.1
31	gb\|DQ120628.1\| Hylobates lar GMCL2 gene, partial cds	44	1.1
32	gb\|DQ120626.1\| Gorilla gorilla GMCL2 gene, partial cds	44	1.1
33	gb\|DQ120625.1\| Pan troglodytes GMCL2 gene, partial cds	44	1.1
34	gb\|DQ120624.1\| Homo sapiens GMCL2 gene, partial cds	44	1.1
35	ref\|NM_001061163.1\| Oryza sativa (japonica cultivar-group) Os05g...	42	4.4
36	emb\|CR932360.11\| Zebrafish DNA sequence from clone CH211-225B10 ...	42	4.4
37	gb\|AC187735.3\| Pan troglodytes BAC clone CH251-499E2 from chromo...	42	4.4
38	gb\|DQ366715.1\| Uncultured Prochlorococcus marinus clone ASNC2259...	42	4.4
39	gb\|AE016827.1\| Mannheimia succiniciproducens MBEL55E, complete g...	42	4.4
40	gb\|AC124142.2\| Oryza sativa (japonica cultivar-group) chromosome...	42	4.4
41	gb\|AC004595.1\| Homo sapiens BAC clone CTB-23M10 from 7, complete...	42	4.4
42	gb\|AC011193.3\| Homo sapiens chromosome 17, clone RP11-521P1, com...	42	4.4
43	emb\|CT009528.9\| M.truncatula DNA sequence from clone MTH2-168J23...	42	4.4
44	gb\|AC096898.6\| Homo sapiens BAC clone RP11-618K19 from 4, comple...	42	4.4
45	dbj\|AP008211.1\| Oryza sativa (japonica cultivar-group) genomic D...	42	4.4
46	gb\|BC091863.1\| Danio rerio hypothetical protein LOC553522, mRNA ...	42	4.4
47	emb\|AL772263.12\| Zebrafish DNA sequence from clone CH211-160D11 ...	42	4.4
48	emb\|CR762487.7\| Zebrafish DNA sequence from clone CH211-197G14 i...	42	4.4
49	emb\|AL928605.22\| Mouse DNA sequence from clone RP23-139P14 on ch...	42	4.4
50	dbj\|BS000123.1\| Pan troglodytes chromosome 22 clone:PTB-109N23, ...	42	4.4
51	dbj\|BS000153.1\| Pan troglodytes chromosome 22 clone:RP43-069E18,...	42	4.4
52	dbj\|AK064563.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	42	4.4
53	emb\|BX072530.5\| Zebrafish DNA sequence from clone DKEY-221K19, c...	42	4.4
54	emb\|AL929222.6\| Zebrafish DNA sequence from clone DKEY-31N5, com...	42	4.4
55	gb\|AC002482.1\|AC002482 Human BAC clone CTA-208O3, complete sequence	42	4.4
56	dbj\|AP001729.1\| Homo sapiens genomic DNA, chromosome 21q, sectio...	42	4.4
57	gb\|AC006840.17\|AC006840 Homo sapiens chromosome 4 clone C0422C23...	42	4.4
58	emb\|AL109628.5\|CNS018OT Human chromosome 14 DNA sequence BAC R-5...	42	4.4
59	gb\|DQ120627.1\| Pongo pygmaeus GMCL2 gene, partial cds	42	4.4
60	gb\|M57506.1\|HUMI309 Human secreted protein (I-309) gene, complet...	42	4.4
61	dbj\|AP000154.1\| Homo sapiens genomic DNA, chromosome 21q22.2, DS...	42	4.4
62	dbj\|AP000012.2\| Homo sapiens genomic DNA of 21q22.2 Down Syndrom...	42	4.4
63	dbj\|AP001413.1\| Homo sapiens genomic DNA, chromosome 21q22.2, cl...	42	4.4

>dbj|AK073064.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033021J15, full
           insert sequence
          Length = 1127
 Score = 81.8 bits (41), Expect = 5e-12
 Identities = 107/129 (82%)
 Strand = Plus / Plus

                                                                       
Query: 685 agaatgctcaaccagcgccaatcactgacgagcactataagaggagtaatgatgcacttg 744
           ||||| |||||||||| |  ||||| || || ||||||||||| | |  |||||||||||
Sbjct: 641 agaatactcaaccagcacagatcacggatgaacactataagagaaatgctgatgcacttg 700

                                                                       
Query: 745 ctgctgctagagaacgagcactggctcgtaagagagcgaaggagcagcaaatatgaagta 804
           ||||||| |||||| |||| ||||| || |||| ||| |||| |||||| ||||||||||
Sbjct: 701 ctgctgccagagaaagagctctggcgcggaagaaagccaaggcgcagcagatatgaagta 760

                    
Query: 805 agatgcaga 813
            || |||||
Sbjct: 761 cgaggcaga 769



 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 76/89 (85%)
 Strand = Plus / Plus

                                                                       
Query: 574 atgaaagtagaagtgtggtagaacctgcaactactggatcaaacgattcaacagctgcta 633
           |||||||||||||||||| ||||||||| || |||  |||||  |||||| | |||||||
Sbjct: 488 atgaaagtagaagtgtggaagaacctgctacaactcaatcaagggattcagctgctgcta 547

                                        
Query: 634 gatctattgagaaagaggcagatgtttcc 662
           ||||||  |||||| | ||||||||||||
Sbjct: 548 gatctaccgagaaaaatgcagatgtttcc 576

to top

>emb|CR855148.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0525C06, complete
             sequence
          Length = 99490

 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 106/129 (82%)
 Strand = Plus / Minus

                                                                         
Query: 685   agaatgctcaaccagcgccaatcactgacgagcactataagaggagtaatgatgcacttg 744
             ||||| |||||||||| |  ||||| || || ||||||||||| | |  |||||||||||
Sbjct: 80800 agaatactcaaccagcacagatcacggatgaacactataagagaaatgctgatgcacttg 80741

                                                                         
Query: 745   ctgctgctagagaacgagcactggctcgtaagagagcgaaggagcagcaaatatgaagta 804
             ||||||| |||||| |||| ||||| || |||| ||| || | |||||| ||||||||||
Sbjct: 80740 ctgctgccagagaaagagctctggcgcggaagaaagccaaagcgcagcagatatgaagta 80681

                      
Query: 805   agatgcaga 813
              || |||||
Sbjct: 80680 cgaggcaga 80672



 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 76/89 (85%)
 Strand = Plus / Minus

                                                                         
Query: 574   atgaaagtagaagtgtggtagaacctgcaactactggatcaaacgattcaacagctgcta 633
             |||||||||||||||||| ||||||||| || |||  |||||  |||||| | |||||||
Sbjct: 80953 atgaaagtagaagtgtggaagaacctgctacaactcaatcaagggattcagctgctgcta 80894

                                          
Query: 634   gatctattgagaaagaggcagatgtttcc 662
             ||||||  |||||| | ||||||||||||
Sbjct: 80893 gatctaccgagaaaaatgcagatgtttcc 80865

to top

>ref|NM_001059407.1| Oryza sativa (japonica cultivar-group) Os04g0440000 (Os04g0440000)
            mRNA, complete cds
          Length = 1621

 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 76/89 (85%)
 Strand = Plus / Plus

                                                                        
Query: 574  atgaaagtagaagtgtggtagaacctgcaactactggatcaaacgattcaacagctgcta 633
            |||||||||||||||||| ||||||||| || |||  |||||  |||||| | |||||||
Sbjct: 968  atgaaagtagaagtgtggaagaacctgctacaactcaatcaagggattcagctgctgcta 1027

                                         
Query: 634  gatctattgagaaagaggcagatgtttcc 662
            ||||||  |||||| | ||||||||||||
Sbjct: 1028 gatctaccgagaaaaatgcagatgtttcc 1056



 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 106/129 (82%)
 Strand = Plus / Plus

                                                                        
Query: 685  agaatgctcaaccagcgccaatcactgacgagcactataagaggagtaatgatgcacttg 744
            ||||| |||||||||| |  ||||| || || ||||||||||| | |  |||||||||||
Sbjct: 1121 agaatactcaaccagcacagatcacggatgaacactataagagaaatgctgatgcacttg 1180

                                                                        
Query: 745  ctgctgctagagaacgagcactggctcgtaagagagcgaaggagcagcaaatatgaagta 804
            ||||||| |||||| |||| ||||| || |||| ||| || | |||||| ||||||||||
Sbjct: 1181 ctgctgccagagaaagagctctggcgcggaagaaagccaaagcgcagcagatatgaagta 1240

                     
Query: 805  agatgcaga 813
             || |||||
Sbjct: 1241 cgaggcaga 1249

to top

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 106/129 (82%)
 Strand = Plus / Minus

                                                                            
Query: 685      agaatgctcaaccagcgccaatcactgacgagcactataagaggagtaatgatgcacttg 744
                ||||| |||||||||| |  ||||| || || ||||||||||| | |  |||||||||||
Sbjct: 21902104 agaatactcaaccagcacagatcacggatgaacactataagagaaatgctgatgcacttg 21902045

                                                                            
Query: 745      ctgctgctagagaacgagcactggctcgtaagagagcgaaggagcagcaaatatgaagta 804
                ||||||| |||||| |||| ||||| || |||| ||| || | |||||| ||||||||||
Sbjct: 21902044 ctgctgccagagaaagagctctggcgcggaagaaagccaaagcgcagcagatatgaagta 21901985

                         
Query: 805      agatgcaga 813
                 || |||||
Sbjct: 21901984 cgaggcaga 21901976



 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 76/89 (85%)
 Strand = Plus / Minus

                                                                            
Query: 574      atgaaagtagaagtgtggtagaacctgcaactactggatcaaacgattcaacagctgcta 633
                |||||||||||||||||| ||||||||| || |||  |||||  |||||| | |||||||
Sbjct: 21902257 atgaaagtagaagtgtggaagaacctgctacaactcaatcaagggattcagctgctgcta 21902198

                                             
Query: 634      gatctattgagaaagaggcagatgtttcc 662
                ||||||  |||||| | ||||||||||||
Sbjct: 21902197 gatctaccgagaaaaatgcagatgtttcc 21902169

to top

>dbj|AK102407.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092M02, full
            insert sequence
          Length = 1587

 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 76/89 (85%)
 Strand = Plus / Plus

                                                                        
Query: 574  atgaaagtagaagtgtggtagaacctgcaactactggatcaaacgattcaacagctgcta 633
            |||||||||||||||||| ||||||||| || |||  |||||  |||||| | |||||||
Sbjct: 980  atgaaagtagaagtgtggaagaacctgctacaactcaatcaagggattcagctgctgcta 1039

                                         
Query: 634  gatctattgagaaagaggcagatgtttcc 662
            ||||||  |||||| | ||||||||||||
Sbjct: 1040 gatctaccgagaaaaatgcagatgtttcc 1068



 Score = 65.9 bits (33), Expect = 3e-07
 Identities = 105/129 (81%)
 Strand = Plus / Plus

                                                                        
Query: 685  agaatgctcaaccagcgccaatcactgacgagcactataagaggagtaatgatgcacttg 744
            ||||| |||||||||| |  ||||| || || ||||||||||| | |  | |||||||||
Sbjct: 1133 agaatactcaaccagcacagatcacggatgaacactataagagaaatgctaatgcacttg 1192

                                                                        
Query: 745  ctgctgctagagaacgagcactggctcgtaagagagcgaaggagcagcaaatatgaagta 804
            ||||||| |||||| |||| ||||| || |||| ||| || | |||||| ||||||||||
Sbjct: 1193 ctgctgccagagaaagagctctggcgcggaagaaagccaaagcgcagcagatatgaagta 1252

                     
Query: 805  agatgcaga 813
             || |||||
Sbjct: 1253 cgaggcaga 1261

to top

>dbj|AK101691.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033059K10, full
            insert sequence
          Length = 1622

 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 76/89 (85%)
 Strand = Plus / Plus

                                                                        
Query: 574  atgaaagtagaagtgtggtagaacctgcaactactggatcaaacgattcaacagctgcta 633
            |||||||||||||||||| ||||||||| || |||  |||||  |||||| | |||||||
Sbjct: 969  atgaaagtagaagtgtggaagaacctgctacaactcaatcaagggattcagctgctgcta 1028

                                         
Query: 634  gatctattgagaaagaggcagatgtttcc 662
            ||||||  |||||| | ||||||||||||
Sbjct: 1029 gatctaccgagaaaaatgcagatgtttcc 1057



 Score = 65.9 bits (33), Expect = 3e-07
 Identities = 81/97 (83%)
 Strand = Plus / Plus

                                                                        
Query: 717  cactataagaggagtaatgatgcacttgctgctgctagagaacgagcactggctcgtaag 776
            ||||||||||| | |  |||||||||||||||||| |||||| |||| ||||| || |||
Sbjct: 1154 cactataagagaaatgctgatgcacttgctgctgccagagaaagagctctggcgcggaag 1213

                                                 
Query: 777  agagcgaaggagcagcaaatatgaagtaagatgcaga 813
            | ||| || | |||||| |||||||||| || |||||
Sbjct: 1214 aaagccaaagcgcagcagatatgaagtacgaggcaga 1250

to top

>emb|AL606452.2|OSJN00007 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000114_01,
             complete sequence
          Length = 127713

 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 106/129 (82%)
 Strand = Plus / Minus

                                                                         
Query: 685   agaatgctcaaccagcgccaatcactgacgagcactataagaggagtaatgatgcacttg 744
             ||||| |||||||||| |  ||||| || || ||||||||||| | |  |||||||||||
Sbjct: 86805 agaatactcaaccagcacagatcacggatgaacactataagagaaatgctgatgcacttg 86746

                                                                         
Query: 745   ctgctgctagagaacgagcactggctcgtaagagagcgaaggagcagcaaatatgaagta 804
             ||||||| |||||| |||| ||||| || |||| ||| || | |||||| ||||||||||
Sbjct: 86745 ctgctgccagagaaagagctctggcgcggaagaaagccaaagcgcagcagatatgaagta 86686

                      
Query: 805   agatgcaga 813
              || |||||
Sbjct: 86685 cgaggcaga 86677



 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 76/89 (85%)
 Strand = Plus / Minus

                                                                         
Query: 574   atgaaagtagaagtgtggtagaacctgcaactactggatcaaacgattcaacagctgcta 633
             |||||||||||||||||| ||||||||| || |||  |||||  |||||| | |||||||
Sbjct: 86958 atgaaagtagaagtgtggaagaacctgctacaactcaatcaagggattcagctgctgcta 86899

                                          
Query: 634   gatctattgagaaagaggcagatgtttcc 662
             ||||||  |||||| | ||||||||||||
Sbjct: 86898 gatctaccgagaaaaatgcagatgtttcc 86870

to top

>gb|AY106057.1| Zea mays PCO097918 mRNA sequence
          Length = 1026

 Score = 48.1 bits (24), Expect = 0.071
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                            
Query: 738  gcacttgctgctgctagagaacgagcactggc 769
            |||||||||||||||||||  |||||||||||
Sbjct: 995  gcacttgctgctgctagagcgcgagcactggc 1026

to top

>emb|BX510942.5| Zebrafish DNA sequence from clone CH211-246H5, complete sequence
          Length = 26202

 Score = 46.1 bits (23), Expect = 0.28
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 321   caaaatatatttttggggattttttaa 347
             |||||||||||||||||| ||||||||
Sbjct: 16474 caaaatatatttttggggcttttttaa 16500

to top

>ref|XM_001148182.1| PREDICTED: Pan troglodytes similar to GMCL2 (LOC738528), mRNA
          Length = 3549

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 454 tttaaaaagtttatcattctggtgag 479
           ||||||||||||| ||||||||||||
Sbjct: 914 tttaaaaagtttaacattctggtgag 889

to top

>gb|DQ894025.1| Homo sapiens clone FLH166642.01L; RZPDo839B0987D GMCL1L mRNA,
           partial sequence
          Length = 1581

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 454 tttaaaaagtttatcattctggtgag 479
           ||||||||||||| ||||||||||||
Sbjct: 750 tttaaaaagtttaacattctggtgag 725

to top

>gb|DQ894023.1| Homo sapiens clone FLH166629.01L; RZPDo839B0787D GMCL1L mRNA,
           partial sequence
          Length = 1581

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 454 tttaaaaagtttatcattctggtgag 479
           ||||||||||||| ||||||||||||
Sbjct: 750 tttaaaaagtttaacattctggtgag 725

to top

>gb|DQ890867.1| Synthetic construct Homo sapiens clone FLH166633.01X;
           RZPDo839B0788D GMCL1L mRNA, complete sequence
          Length = 1581

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 454 tttaaaaagtttatcattctggtgag 479
           ||||||||||||| ||||||||||||
Sbjct: 750 tttaaaaagtttaacattctggtgag 725

to top

>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence
          Length = 27905053

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 513      gaattaaattgcttgctgatta 534
                ||||||||||||||||||||||
Sbjct: 23019566 gaattaaattgcttgctgatta 23019545

to top

>ref|XM_001095683.1| PREDICTED: Macaca mulatta germ cell-less homolog 1
           (Drosophila)-like (GMCL1L), mRNA
          Length = 3036

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 454 tttaaaaagtttatcattctggtgag 479
           ||||||||||||| ||||||||||||
Sbjct: 904 tttaaaaagtttaacattctggtgag 879

to top

>gb|AC150554.1| Drosophila melanogaster clone BACR21O10, complete sequence
          Length = 193926

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 513    gaattaaattgcttgctgatta 534
              ||||||||||||||||||||||
Sbjct: 178641 gaattaaattgcttgctgatta 178620

to top

>gb|BC033886.2| Homo sapiens germ cell-less homolog 1 (Drosophila)-like, mRNA (cDNA
           clone MGC:32971 IMAGE:5269791), complete cds
          Length = 2945

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 454 tttaaaaagtttatcattctggtgag 479
           ||||||||||||| ||||||||||||
Sbjct: 883 tttaaaaagtttaacattctggtgag 858

to top

>gb|BC024185.1| Homo sapiens germ cell-less homolog 1 (Drosophila)-like, mRNA (cDNA
           clone MGC:26585 IMAGE:4824160), complete cds
          Length = 2957

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 454 tttaaaaagtttatcattctggtgag 479
           ||||||||||||| ||||||||||||
Sbjct: 877 tttaaaaagtttaacattctggtgag 852

to top

>gb|BC024184.2| Homo sapiens germ cell-less homolog 1 (Drosophila)-like, mRNA (cDNA
           clone MGC:26583 IMAGE:4823275), complete cds
          Length = 2931

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 454 tttaaaaagtttatcattctggtgag 479
           ||||||||||||| ||||||||||||
Sbjct: 869 tttaaaaagtttaacattctggtgag 844

to top

>gb|AC103749.2| Homo sapiens chromosome 15, clone RP11-4F5, complete sequence
          Length = 190678

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 324    aatatatttttggggatttttt 345
              ||||||||||||||||||||||
Sbjct: 122591 aatatatttttggggatttttt 122570

to top

>gb|AC010299.8| Homo sapiens chromosome 5 clone CTB-174J2, complete sequence
          Length = 107689

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 454    tttaaaaagtttatcattctggtgag 479
              ||||||||||||| ||||||||||||
Sbjct: 107236 tttaaaaagtttaacattctggtgag 107211

to top

>dbj|AB168490.1| Macaca fascicularis testis cDNA clone: QtsA-12528, similar to human
           germ cell-less homolog 1 (Drosophila) (GCL), mRNA,
           RefSeq: NM_178439.3
          Length = 2609

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 454 tttaaaaagtttatcattctggtgag 479
           ||||||||||||| ||||||||||||
Sbjct: 464 tttaaaaagtttaacattctggtgag 439

to top

>gb|AC091821.3| Homo sapiens chromosome 5 clone CTC-325G23, complete sequence
          Length = 141771

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 454    tttaaaaagtttatcattctggtgag 479
              ||||||||||||| ||||||||||||
Sbjct: 132034 tttaaaaagtttaacattctggtgag 132059

to top

>emb|BX465199.9| Zebrafish DNA sequence from clone DKEY-84I7 in linkage group 5,
             complete sequence
          Length = 218103

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 330   tttttggggattttttaaaggt 351
             ||||||||||||||||||||||
Sbjct: 50781 tttttggggattttttaaaggt 50760

to top

>gb|AC136632.3| Homo sapiens chromosome 5 clone RP11-889L3, complete sequence
          Length = 222295

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 454    tttaaaaagtttatcattctggtgag 479
              ||||||||||||| ||||||||||||
Sbjct: 177814 tttaaaaagtttaacattctggtgag 177839

to top

>gb|AC009848.9|AC009848 Drosophila melanogaster, chromosome 3R, region 97E-98A, BAC clone
            BACR02B05, complete sequence
          Length = 189694

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 513  gaattaaattgcttgctgatta 534
            ||||||||||||||||||||||
Sbjct: 7975 gaattaaattgcttgctgatta 7954

to top

>gb|AC008216.3|AC008216 Drosophila melanogaster, chromosome 3R, region 97E-97E, BAC clone
              BACR27C22, complete sequence
          Length = 179486

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 513    gaattaaattgcttgctgatta 534
              ||||||||||||||||||||||
Sbjct: 153239 gaattaaattgcttgctgatta 153218

to top

>gb|AC136601.2| Homo sapiens chromosome 5 clone RP11-1259L22, complete sequence
          Length = 186323

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 454    tttaaaaagtttatcattctggtgag 479
              ||||||||||||| ||||||||||||
Sbjct: 181502 tttaaaaagtttaacattctggtgag 181477

to top

>dbj|AP001970.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2216M2, complete
             sequence
          Length = 90211

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 337   ggattttttaaaggttgtggat 358
             ||||||||||||||||||||||
Sbjct: 56572 ggattttttaaaggttgtggat 56593

to top

>gb|AY814503.1| Schistosoma japonicum clone SJCHGC00012 unknown mRNA
          Length = 1131

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 883 ttcagttgatgatgcacgtatc 904
           ||||||||||||||||||||||
Sbjct: 177 ttcagttgatgatgcacgtatc 198

to top

>gb|DQ120628.1| Hylobates lar GMCL2 gene, partial cds
          Length = 1539

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 454 tttaaaaagtttatcattctggtgag 479
           ||||||||||||| ||||||||||||
Sbjct: 750 tttaaaaagtttaacattctggtgag 725

to top

>gb|DQ120626.1| Gorilla gorilla GMCL2 gene, partial cds
          Length = 1539

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 454 tttaaaaagtttatcattctggtgag 479
           ||||||||||||| ||||||||||||
Sbjct: 750 tttaaaaagtttaacattctggtgag 725

to top

>gb|DQ120625.1| Pan troglodytes GMCL2 gene, partial cds
          Length = 1539

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 454 tttaaaaagtttatcattctggtgag 479
           ||||||||||||| ||||||||||||
Sbjct: 750 tttaaaaagtttaacattctggtgag 725

to top

>gb|DQ120624.1| Homo sapiens GMCL2 gene, partial cds
          Length = 1539

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 454 tttaaaaagtttatcattctggtgag 479
           ||||||||||||| ||||||||||||
Sbjct: 750 tttaaaaagtttaacattctggtgag 725

to top

>ref|NM_001061163.1| Oryza sativa (japonica cultivar-group) Os05g0144900 (Os05g0144900)
           mRNA, partial cds
          Length = 1953

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 132 ggcatcatgcaagctatcagacacttcaa 160
           |||||||||||||||||  ||||||||||
Sbjct: 849 ggcatcatgcaagctattggacacttcaa 877

to top

>emb|CR932360.11| Zebrafish DNA sequence from clone CH211-225B10 in linkage group 12,
            complete sequence
          Length = 164973

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 315  ttatttcaaaatatatttttg 335
            |||||||||||||||||||||
Sbjct: 7118 ttatttcaaaatatatttttg 7098

to top

>gb|AC187735.3| Pan troglodytes BAC clone CH251-499E2 from chromosome 7, complete
             sequence
          Length = 219487

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 314   cttatttcaaaatatattttt 334
             |||||||||||||||||||||
Sbjct: 98167 cttatttcaaaatatattttt 98187

to top

>gb|DQ366715.1| Uncultured Prochlorococcus marinus clone ASNC2259 genomic sequence
          Length = 35161

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 315   ttatttcaaaatatatttttg 335
             |||||||||||||||||||||
Sbjct: 27151 ttatttcaaaatatatttttg 27171

to top

>gb|AE016827.1| Mannheimia succiniciproducens MBEL55E, complete genome
          Length = 2314078

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 318    tttcaaaatatatttttgggg 338
              |||||||||||||||||||||
Sbjct: 175087 tttcaaaatatatttttgggg 175067

to top

>gb|AC124142.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0015A05, complete sequence
          Length = 127330

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 132   ggcatcatgcaagctatcagacacttcaa 160
             |||||||||||||||||  ||||||||||
Sbjct: 21222 ggcatcatgcaagctattggacacttcaa 21250

to top

>gb|AC004595.1| Homo sapiens BAC clone CTB-23M10 from 7, complete sequence
          Length = 136170

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 314   cttatttcaaaatatattttt 334
             |||||||||||||||||||||
Sbjct: 75831 cttatttcaaaatatattttt 75811

to top

>gb|AC011193.3| Homo sapiens chromosome 17, clone RP11-521P1, complete sequence
          Length = 181022

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 199    atgtattgctatttgcatttt 219
              |||||||||||||||||||||
Sbjct: 126657 atgtattgctatttgcatttt 126677

to top

>emb|CT009528.9| M.truncatula DNA sequence from clone MTH2-168J23 on chromosome 3,
             complete sequence
          Length = 129215

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 316   tatttcaaaatatatttttgg 336
             |||||||||||||||||||||
Sbjct: 46817 tatttcaaaatatatttttgg 46837

to top

>gb|AC096898.6| Homo sapiens BAC clone RP11-618K19 from 4, complete sequence
          Length = 160826

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 367   ggtaagagctgatgtttcagt 387
             |||||||||||||||||||||
Sbjct: 61004 ggtaagagctgatgtttcagt 61024

to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 132     ggcatcatgcaagctatcagacacttcaa 160
               |||||||||||||||||  ||||||||||
Sbjct: 2536336 ggcatcatgcaagctattggacacttcaa 2536364

to top

>gb|BC091863.1| Danio rerio hypothetical protein LOC553522, mRNA (cDNA clone
            IMAGE:7155161), partial cds
          Length = 2065

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 315  ttatttcaaaatatatttttg 335
            |||||||||||||||||||||
Sbjct: 1677 ttatttcaaaatatatttttg 1697

to top

>emb|AL772263.12| Zebrafish DNA sequence from clone CH211-160D11 in linkage group 6,
             complete sequence
          Length = 153222

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 314   cttatttcaaaatatattttt 334
             |||||||||||||||||||||
Sbjct: 62266 cttatttcaaaatatattttt 62286

to top

>emb|CR762487.7| Zebrafish DNA sequence from clone CH211-197G14 in linkage group 13,
              complete sequence
          Length = 219918

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 244    ttttttgttaggacagaagcc 264
              |||||||||||||||||||||
Sbjct: 178057 ttttttgttaggacagaagcc 178077

to top

>emb|AL928605.22| Mouse DNA sequence from clone RP23-139P14 on chromosome 4, complete
             sequence
          Length = 209024

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 376   tgatgtttcagttaggaactg 396
             |||||||||||||||||||||
Sbjct: 13150 tgatgtttcagttaggaactg 13130

to top

>dbj|BS000123.1| Pan troglodytes chromosome 22 clone:PTB-109N23, map 22, complete
             sequences
          Length = 216200

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 201   gtattgctatttgcattttaa 221
             |||||||||||||||||||||
Sbjct: 28153 gtattgctatttgcattttaa 28133

to top

>dbj|BS000153.1| Pan troglodytes chromosome 22 clone:RP43-069E18, map 22, complete
              sequences
          Length = 194937

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 201    gtattgctatttgcattttaa 221
              |||||||||||||||||||||
Sbjct: 102985 gtattgctatttgcattttaa 102965

to top

>dbj|AK064563.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-112-D01, full
           insert sequence
          Length = 1952

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 132 ggcatcatgcaagctatcagacacttcaa 160
           |||||||||||||||||  ||||||||||
Sbjct: 849 ggcatcatgcaagctattggacacttcaa 877

to top

>emb|BX072530.5| Zebrafish DNA sequence from clone DKEY-221K19, complete sequence
          Length = 167009

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 244  ttttttgttaggacagaagcc 264
            |||||||||||||||||||||
Sbjct: 6325 ttttttgttaggacagaagcc 6345

to top

>emb|AL929222.6| Zebrafish DNA sequence from clone DKEY-31N5, complete sequence
          Length = 212599

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 343   tttaaaggttgtggataacaa 363
             |||||||||||||||||||||
Sbjct: 80483 tttaaaggttgtggataacaa 80463

to top

>gb|AC002482.1|AC002482 Human BAC clone CTA-208O3, complete sequence
          Length = 107815

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 199   atgtattgctatttgcatttt 219
             |||||||||||||||||||||
Sbjct: 16157 atgtattgctatttgcatttt 16137

to top

>dbj|AP001729.1| Homo sapiens genomic DNA, chromosome 21q, section 73/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 201   gtattgctatttgcattttaa 221
             |||||||||||||||||||||
Sbjct: 31588 gtattgctatttgcattttaa 31568

to top

>gb|AC006840.17|AC006840 Homo sapiens chromosome 4 clone C0422C23, complete sequence
          Length = 201657

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1039   cattgtatttactgaatattt 1059
              |||||||||||||||||||||
Sbjct: 159546 cattgtatttactgaatattt 159526

to top

>emb|AL109628.5|CNS018OT Human chromosome 14 DNA sequence BAC R-545M17 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 209817

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 199    atgtattgctatttgcattttaagt 223
              |||||||||||||| ||||||||||
Sbjct: 174534 atgtattgctatttccattttaagt 174510

to top

>gb|DQ120627.1| Pongo pygmaeus GMCL2 gene, partial cds
          Length = 1512

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 454 tttaaaaagtttatcattctggtga 478
           ||||||||||||| |||||||||||
Sbjct: 723 tttaaaaagtttaacattctggtga 699

to top

>gb|M57506.1|HUMI309 Human secreted protein (I-309) gene, complete cds
          Length = 3709

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 199 atgtattgctatttgcatttt 219
           |||||||||||||||||||||
Sbjct: 348 atgtattgctatttgcatttt 368

to top

>dbj|AP000154.1| Homo sapiens genomic DNA, chromosome 21q22.2, DSCR region, clone
             D47-S479, segment 6/16, complete sequence
          Length = 100000

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 201   gtattgctatttgcattttaa 221
             |||||||||||||||||||||
Sbjct: 40005 gtattgctatttgcattttaa 39985

to top

>dbj|AP000012.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrome region, segment 5/13
          Length = 112074

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 201   gtattgctatttgcattttaa 221
             |||||||||||||||||||||
Sbjct: 87660 gtattgctatttgcattttaa 87640

to top

>dbj|AP001413.1| Homo sapiens genomic DNA, chromosome 21q22.2, clone:D26, LB7T-ERG
             region, complete sequence
          Length = 67911

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 201   gtattgctatttgcattttaa 221
             |||||||||||||||||||||
Sbjct: 61710 gtattgctatttgcattttaa 61690


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 237,385,303
Number of extensions: 13075275
Number of successful extensions: 277436
Number of sequences better than 10.0: 63
Number of HSP's gapped: 277435
Number of HSP's successfully gapped: 70
Length of query: 1160
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1137
Effective length of database: 18,503,978,556
Effective search space: 21039023618172
Effective search space used: 21039023618172
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result