| Clone Name | FLbaf151e16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | O00337:S28A1_HUMAN Sodium/nucleoside cotransporter 1 - Homo sapi... | 33 | 3.7 | 2 | P23803:ODD_DROME Protein odd-skipped - Drosophila melanogaster (... | 32 | 6.3 | 3 | P29130:PHYB_TOBAC Phytochrome B - Nicotiana tabacum (Common toba... | 32 | 8.2 |
|---|
>O00337:S28A1_HUMAN Sodium/nucleoside cotransporter 1 - Homo sapiens (Human)| Length = 649 Score = 33.1 bits (74), Expect = 3.7 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 4/69 (5%) Frame = +2 Query: 404 GGVAAWMPTGRSPTSFLTTYGRRTRSGVRMVRGCRSFLT----GATGSCSTMCLTCLPSS 571 GG+ + +P +S S + T + V +V C + + GA C ++ T L SS Sbjct: 552 GGLTSMVPQRKSDFSQIVLRALFTGACVSLVNACMAGILYMPRGAEVDCMSLLNTTLSSS 611 Query: 572 SMETHQSCR 598 S E +Q CR Sbjct: 612 SFEIYQCCR 620
>P23803:ODD_DROME Protein odd-skipped - Drosophila melanogaster (Fruit fly)| Length = 392 Score = 32.3 bits (72), Expect = 6.3 Identities = 18/37 (48%), Positives = 20/37 (54%) Frame = -3 Query: 679 HNHCYHHCWNHGNLHHCHP*YVLGWKMPAGLMSLHRA 569 H H +HH HG+ HH HP PAGL SLH A Sbjct: 150 HPHHHHH---HGHPHHPHPHPHHVRPYPAGLHSLHAA 183
>P29130:PHYB_TOBAC Phytochrome B - Nicotiana tabacum (Common tobacco)| Length = 1132 Score = 32.0 bits (71), Expect = 8.2 Identities = 21/71 (29%), Positives = 32/71 (45%) Frame = +1 Query: 793 CREPLTDKISSLSARFPGLRTLRSCDLSARSWMSIAWYPIYRIPTGPTLKDLDACFLTFH 972 C L D + + + P + L CD A + +YP+ PT +KD+ LT+H Sbjct: 428 CDMLLRDSPTGIVIQSPSIMDLVKCD-GAALYCQGKYYPLGVTPTEAQIKDIVEWLLTYH 486 Query: 973 QLSNCLQGDNL 1005 S L D+L Sbjct: 487 GDSTGLSTDSL 497 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 310,149,073 Number of extensions: 6923249 Number of successful extensions: 18070 Number of sequences better than 10.0: 3 Number of HSP's gapped: 17912 Number of HSP's successfully gapped: 3 Length of query: 573 Length of database: 100,686,439 Length adjustment: 119 Effective length of query: 454 Effective length of database: 68,045,334 Effective search space: 30892581636 Effective search space used: 30892581636 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)