| Clone Name | FLbaf151d10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ244901.1| Zea mays clone 11706 mRNA sequence Length = 1029 Score = 1053 bits (531), Expect = 0.0 Identities = 701/757 (92%), Gaps = 3/757 (0%) Strand = Plus / Plus Query: 142 aggtttcaaccctgagcaagcgcaagatggctgccaatgttggggaatcggcggcagtcg 201 ||||||||||||| | |||| ||||||||| ||||||||||||||||| |||||||| | Sbjct: 56 aggtttcaacccttaagaagctcaagatggccgccaatgttggggaatcagcggcagttg 115 Query: 202 gtggcagcagcagcagcgatgcagccggagggagcttcgagtgcaatatctgctttgagt 261 ||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 116 gtggcag---cagcagcgatgcagctggagggagcttcgagtgcaatatttgctttgagt 172 Query: 262 tgccacaagagccaatagtaactctctgcggccacctattctgctggccgtgcctctaca 321 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 173 tgccgcaagagccaatagtaactctctgtggccacctattctgctggccgtgcctctaca 232 Query: 322 gatggctgcacatgcacgcgaacacgccagagtgccctgtgtgcaaggccattgttgaag 381 ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 233 gatggctgcacatgcacgccaacacaccagagtgccctgtgtgcaaggccattgttgaag 292 Query: 382 aagacaagcttgtccccctttatggccgtggcaaggaccgcgtcgacccaaggtcaaaga 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 293 aagacaagcttgtccccctttatggccgtggcaaggaccgcgtcgacccaaggtcaaaga 352 Query: 442 acacgcctggcgccgacattcctcagcgcccagctggccagaggcccgcgacagccccac 501 |||||||||| | ||||||||||||||||||||||||||||||||| || ||||||| || Sbjct: 353 acacgcctggaggcgacattcctcagcgcccagctggccagaggcctgctacagcccaac 412 Query: 502 aggctgatccaaacaacaatttcggcaacgcccatgcaaacccatggttcatgggcgtgg 561 |||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||| ||| Sbjct: 413 aggctgatccgaacaacaattttggcaacgcccatgcaaatccatggttcatgggcatgg 472 Query: 562 gtggcgcaggggcgggggcgggtgtcccgctggcgaatgcacggtggggcaactatgcgt 621 | ||||| |||||||||||||| || || |||||||||| |||||||||||||||||||| Sbjct: 473 ggggcgcgggggcgggggcgggagttccactggcgaatggacggtggggcaactatgcgt 532 Query: 622 tctcggccgcattcgggggcctgttccccatgctcagcttccaaatgcatgggtttccag 681 ||||||| || || |||||||||||||| ||||| |||||||||||||||||||| |||| Sbjct: 533 tctcggctgcgtttgggggcctgttccctatgcttagcttccaaatgcatgggttcccag 592 Query: 682 atccagccgcatatgcccagccggctgggtttcactatgggtttggccatggccatgggt 741 ||||||| |||||||| ||||| || |||||||||||||||||||| || |||||||||| Sbjct: 593 atccagctgcatatgctcagcctgccgggtttcactatgggtttggtcacggccatgggt 652 Query: 742 tccatggcgggcatatggggcctgcccacggcgtcccccgtcaagggccgctagggcagc 801 ||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||| Sbjct: 653 tccatggcgggcatatggggcacgcccacggcgtcccccgccaaggaccgctagggcagc 712 Query: 802 agcagcagcaggcggatgtctacctgaaggcccttcttatcatggtcggggttctcgtga 861 ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 713 agcagcagcaggcagatgtctacctgaaggcccttcttatcatggtcggagttcttgtga 772 Query: 862 ttgcaagcctcctcgcggcgtaaatctgttgctgcta 898 | |||||||||||||| || |||| |||| |||||| Sbjct: 773 tcgcaagcctcctcgcagcttaaagttgttactgcta 809 Score = 46.1 bits (23), Expect = 0.29 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1016 ttttgactcctttgatttgataa 1038 ||||||||||||||||||||||| Sbjct: 981 ttttgactcctttgatttgataa 1003 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 965 tatggagtgtccatggagttcctgtatcta 994 |||| ||||||||||||||| ||||||||| Sbjct: 915 tatgaagtgtccatggagtttctgtatcta 944
>emb|CT829381.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA122M08, full insert sequence Length = 1236 Score = 252 bits (127), Expect = 3e-63 Identities = 262/307 (85%) Strand = Plus / Plus Query: 217 gcgatgcagccggagggagcttcgagtgcaatatctgctttgagttgccacaagagccaa 276 |||||||||| || |||||||| || ||||||||||||||||| ||||||||||| |||| Sbjct: 197 gcgatgcagctggggggagctttgaatgcaatatctgctttgaattgccacaagaaccaa 256 Query: 277 tagtaactctctgcggccacctattctgctggccgtgcctctacagatggctgcacatgc 336 |||| |||||||| |||||||| ||||||||||| || | ||||| ||| ||||||| | Sbjct: 257 tagttactctctgtggccacctcttctgctggccatgtatttacaggtggttgcacatcc 316 Query: 337 acgcgaacacgccagagtgccctgtgtgcaaggccattgttgaagaagacaagcttgtcc 396 |||| || | ||||||||||| |||||||| || | |||||||| || ||||| || | Sbjct: 317 acgcacactctccagagtgcccggtgtgcaaagctgtcgttgaagaggataagctcgttc 376 Query: 397 ccctttatggccgtggcaaggaccgcgtcgacccaaggtcaaagaacacgcctggcgccg 456 |||||||||| |||||||||||||||||||| |||||||||||||||| || | || | Sbjct: 377 ccctttatgggcgtggcaaggaccgcgtcgatccaaggtcaaagaacatacccgaggctg 436 Query: 457 acattcctcagcgcccagctggccagaggcccgcgacagccccacaggctgatccaaaca 516 |||||||| | |||||| ||||||||||||| || ||||| |||||||| ||||| |||| Sbjct: 437 acattcctaaccgcccaactggccagaggcctgccacagctccacaggccgatcctaaca 496 Query: 517 acaattt 523 ||||||| Sbjct: 497 acaattt 503 Score = 133 bits (67), Expect = 2e-27 Identities = 230/283 (81%), Gaps = 6/283 (2%) Strand = Plus / Plus Query: 592 tggcgaatgcacggtggggcaactatgcgttctcggccgcattcgggggcctgttcccca 651 |||| |||||||||||||| || ||||| ||||| || || || || ||||| ||||| | Sbjct: 563 tggctaatgcacggtgggggaattatgcattctcagctgcgtttggaggcctattcccta 622 Query: 652 tgctcagcttccaaatgcatgggtttccagatccagccgcatatgcccagccggctgggt 711 |||| ||||||||| ||||||| ||||||||| || | ||||| ||||| ||||||| Sbjct: 623 tgcttagcttccaagtgcatggatttccagatgcaaatccttatgcacagcctgctgggt 682 Query: 712 ttcactatgggtttggccatggccatgggttccatggcgggcatatggggc---ctgccc 768 |||||||||||| ||||||||| ||||| ||||||||||| |||||||| | | |||| Sbjct: 683 ttcactatgggtatggccatggtcatggattccatggcggacatatgggtcatgccgccc 742 Query: 769 acggcgtcccccgtcaagggccgctagggcagcagcagcagcaggcggatgtctacctga 828 || | ||||| || ||||| || || | |||| | ||||||||| || ||||||||| Sbjct: 743 acagtgtccctcgacaaggaccact---ggagcaaccgcagcaggcagacatctacctga 799 Query: 829 aggcccttcttatcatggtcggggttctcgtgattgcaagcct 871 ||||||| || |||||||| || |||| ||| |||||||||| Sbjct: 800 aggccctgctaatcatggttggatttcttgtggttgcaagcct 842 Score = 48.1 bits (24), Expect = 0.074 Identities = 27/28 (96%) Strand = Plus / Plus Query: 163 gcaagatggctgccaatgttggggaatc 190 |||||||||| ||||||||||||||||| Sbjct: 149 gcaagatggcagccaatgttggggaatc 176
>ref|NM_001057427.1| Oryza sativa (japonica cultivar-group) Os03g0678400 (Os03g0678400) mRNA, complete cds Length = 1905 Score = 252 bits (127), Expect = 3e-63 Identities = 262/307 (85%) Strand = Plus / Plus Query: 217 gcgatgcagccggagggagcttcgagtgcaatatctgctttgagttgccacaagagccaa 276 |||||||||| || |||||||| || ||||||||||||||||| ||||||||||| |||| Sbjct: 925 gcgatgcagctggggggagctttgaatgcaatatctgctttgaattgccacaagaaccaa 984 Query: 277 tagtaactctctgcggccacctattctgctggccgtgcctctacagatggctgcacatgc 336 |||| |||||||| |||||||| ||||||||||| || | ||||| ||| ||||||| | Sbjct: 985 tagttactctctgtggccacctcttctgctggccatgtatttacaggtggttgcacatcc 1044 Query: 337 acgcgaacacgccagagtgccctgtgtgcaaggccattgttgaagaagacaagcttgtcc 396 |||| || | ||||||||||| |||||||| || | |||||||| || ||||| || | Sbjct: 1045 acgcacactctccagagtgcccggtgtgcaaagctgtcgttgaagaggataagctcgttc 1104 Query: 397 ccctttatggccgtggcaaggaccgcgtcgacccaaggtcaaagaacacgcctggcgccg 456 |||||||||| |||||||||||||||||||| |||||||||||||||| || | || | Sbjct: 1105 ccctttatgggcgtggcaaggaccgcgtcgatccaaggtcaaagaacatacccgaggctg 1164 Query: 457 acattcctcagcgcccagctggccagaggcccgcgacagccccacaggctgatccaaaca 516 |||||||| | |||||| ||||||||||||| || ||||| |||||||| ||||| |||| Sbjct: 1165 acattcctaaccgcccaactggccagaggcctgccacagctccacaggccgatcctaaca 1224 Query: 517 acaattt 523 ||||||| Sbjct: 1225 acaattt 1231 Score = 141 bits (71), Expect = 7e-30 Identities = 231/283 (81%), Gaps = 6/283 (2%) Strand = Plus / Plus Query: 592 tggcgaatgcacggtggggcaactatgcgttctcggccgcattcgggggcctgttcccca 651 |||| |||||||||||||| || ||||| ||||| || || || || ||||| ||||| | Sbjct: 1291 tggctaatgcacggtgggggaattatgcattctcagctgcgtttggaggcctattcccta 1350 Query: 652 tgctcagcttccaaatgcatgggtttccagatccagccgcatatgcccagccggctgggt 711 |||| ||||||||| ||||||| ||||||||| || | ||||| ||||| ||||||| Sbjct: 1351 tgcttagcttccaagtgcatggatttccagatgcaaatccttatgcacagcctgctgggt 1410 Query: 712 ttcactatgggtttggccatggccatgggttccatggcgggcatatggggc---ctgccc 768 |||||||||||| ||||||||| ||||| ||||||||||| |||||||| | | |||| Sbjct: 1411 ttcactatgggtatggccatggtcatggattccatggcggacatatgggtcatgccgccc 1470 Query: 769 acggcgtcccccgtcaagggccgctagggcagcagcagcagcaggcggatgtctacctga 828 |||| ||||| || ||||| || || | |||| | ||||||||| || ||||||||| Sbjct: 1471 acggtgtccctcgacaaggaccact---ggagcaaccgcagcaggcagacatctacctga 1527 Query: 829 aggcccttcttatcatggtcggggttctcgtgattgcaagcct 871 ||||||| || |||||||| || |||| ||| |||||||||| Sbjct: 1528 aggccctgctaatcatggttggatttcttgtggttgcaagcct 1570 Score = 48.1 bits (24), Expect = 0.074 Identities = 27/28 (96%) Strand = Plus / Plus Query: 163 gcaagatggctgccaatgttggggaatc 190 |||||||||| ||||||||||||||||| Sbjct: 877 gcaagatggcagccaatgttggggaatc 904
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 252 bits (127), Expect = 3e-63 Identities = 262/307 (85%) Strand = Plus / Plus Query: 217 gcgatgcagccggagggagcttcgagtgcaatatctgctttgagttgccacaagagccaa 276 |||||||||| || |||||||| || ||||||||||||||||| ||||||||||| |||| Sbjct: 26663923 gcgatgcagctggggggagctttgaatgcaatatctgctttgaattgccacaagaaccaa 26663982 Query: 277 tagtaactctctgcggccacctattctgctggccgtgcctctacagatggctgcacatgc 336 |||| |||||||| |||||||| ||||||||||| || | ||||| ||| ||||||| | Sbjct: 26663983 tagttactctctgtggccacctcttctgctggccatgtatttacaggtggttgcacatcc 26664042 Query: 337 acgcgaacacgccagagtgccctgtgtgcaaggccattgttgaagaagacaagcttgtcc 396 |||| || | ||||||||||| |||||||| || | |||||||| || ||||| || | Sbjct: 26664043 acgcacactctccagagtgcccggtgtgcaaagctgtcgttgaagaggataagctcgttc 26664102 Query: 397 ccctttatggccgtggcaaggaccgcgtcgacccaaggtcaaagaacacgcctggcgccg 456 |||||||||| |||||||||||||||||||| |||||||||||||||| || | || | Sbjct: 26664103 ccctttatgggcgtggcaaggaccgcgtcgatccaaggtcaaagaacatacccgaggctg 26664162 Query: 457 acattcctcagcgcccagctggccagaggcccgcgacagccccacaggctgatccaaaca 516 |||||||| | |||||| ||||||||||||| || ||||| |||||||| ||||| |||| Sbjct: 26664163 acattcctaaccgcccaactggccagaggcctgccacagctccacaggccgatcctaaca 26664222 Query: 517 acaattt 523 ||||||| Sbjct: 26664223 acaattt 26664229 Score = 141 bits (71), Expect = 7e-30 Identities = 231/283 (81%), Gaps = 6/283 (2%) Strand = Plus / Plus Query: 592 tggcgaatgcacggtggggcaactatgcgttctcggccgcattcgggggcctgttcccca 651 |||| |||||||||||||| || ||||| ||||| || || || || ||||| ||||| | Sbjct: 26664289 tggctaatgcacggtgggggaattatgcattctcagctgcgtttggaggcctattcccta 26664348 Query: 652 tgctcagcttccaaatgcatgggtttccagatccagccgcatatgcccagccggctgggt 711 |||| ||||||||| ||||||| ||||||||| || | ||||| ||||| ||||||| Sbjct: 26664349 tgcttagcttccaagtgcatggatttccagatgcaaatccttatgcacagcctgctgggt 26664408 Query: 712 ttcactatgggtttggccatggccatgggttccatggcgggcatatggggc---ctgccc 768 |||||||||||| ||||||||| ||||| ||||||||||| |||||||| | | |||| Sbjct: 26664409 ttcactatgggtatggccatggtcatggattccatggcggacatatgggtcatgccgccc 26664468 Query: 769 acggcgtcccccgtcaagggccgctagggcagcagcagcagcaggcggatgtctacctga 828 |||| ||||| || ||||| || || | |||| | ||||||||| || ||||||||| Sbjct: 26664469 acggtgtccctcgacaaggaccact---ggagcaaccgcagcaggcagacatctacctga 26664525 Query: 829 aggcccttcttatcatggtcggggttctcgtgattgcaagcct 871 ||||||| || |||||||| || |||| ||| |||||||||| Sbjct: 26664526 aggccctgctaatcatggttggatttcttgtggttgcaagcct 26664568 Score = 48.1 bits (24), Expect = 0.074 Identities = 27/28 (96%) Strand = Plus / Plus Query: 163 gcaagatggctgccaatgttggggaatc 190 |||||||||| ||||||||||||||||| Sbjct: 26663875 gcaagatggcagccaatgttggggaatc 26663902
>gb|AC079889.20| Oryza sativa chromosome 3 BAC OSJNBa0092M19 genomic sequence, complete sequence Length = 136712 Score = 252 bits (127), Expect = 3e-63 Identities = 262/307 (85%) Strand = Plus / Plus Query: 217 gcgatgcagccggagggagcttcgagtgcaatatctgctttgagttgccacaagagccaa 276 |||||||||| || |||||||| || ||||||||||||||||| ||||||||||| |||| Sbjct: 95414 gcgatgcagctggggggagctttgaatgcaatatctgctttgaattgccacaagaaccaa 95473 Query: 277 tagtaactctctgcggccacctattctgctggccgtgcctctacagatggctgcacatgc 336 |||| |||||||| |||||||| ||||||||||| || | ||||| ||| ||||||| | Sbjct: 95474 tagttactctctgtggccacctcttctgctggccatgtatttacaggtggttgcacatcc 95533 Query: 337 acgcgaacacgccagagtgccctgtgtgcaaggccattgttgaagaagacaagcttgtcc 396 |||| || | ||||||||||| |||||||| || | |||||||| || ||||| || | Sbjct: 95534 acgcacactctccagagtgcccggtgtgcaaagctgtcgttgaagaggataagctcgttc 95593 Query: 397 ccctttatggccgtggcaaggaccgcgtcgacccaaggtcaaagaacacgcctggcgccg 456 |||||||||| |||||||||||||||||||| |||||||||||||||| || | || | Sbjct: 95594 ccctttatgggcgtggcaaggaccgcgtcgatccaaggtcaaagaacatacccgaggctg 95653 Query: 457 acattcctcagcgcccagctggccagaggcccgcgacagccccacaggctgatccaaaca 516 |||||||| | |||||| ||||||||||||| || ||||| |||||||| ||||| |||| Sbjct: 95654 acattcctaaccgcccaactggccagaggcctgccacagctccacaggccgatcctaaca 95713 Query: 517 acaattt 523 ||||||| Sbjct: 95714 acaattt 95720 Score = 141 bits (71), Expect = 7e-30 Identities = 231/283 (81%), Gaps = 6/283 (2%) Strand = Plus / Plus Query: 592 tggcgaatgcacggtggggcaactatgcgttctcggccgcattcgggggcctgttcccca 651 |||| |||||||||||||| || ||||| ||||| || || || || ||||| ||||| | Sbjct: 95780 tggctaatgcacggtgggggaattatgcattctcagctgcgtttggaggcctattcccta 95839 Query: 652 tgctcagcttccaaatgcatgggtttccagatccagccgcatatgcccagccggctgggt 711 |||| ||||||||| ||||||| ||||||||| || | ||||| ||||| ||||||| Sbjct: 95840 tgcttagcttccaagtgcatggatttccagatgcaaatccttatgcacagcctgctgggt 95899 Query: 712 ttcactatgggtttggccatggccatgggttccatggcgggcatatggggc---ctgccc 768 |||||||||||| ||||||||| ||||| ||||||||||| |||||||| | | |||| Sbjct: 95900 ttcactatgggtatggccatggtcatggattccatggcggacatatgggtcatgccgccc 95959 Query: 769 acggcgtcccccgtcaagggccgctagggcagcagcagcagcaggcggatgtctacctga 828 |||| ||||| || ||||| || || | |||| | ||||||||| || ||||||||| Sbjct: 95960 acggtgtccctcgacaaggaccact---ggagcaaccgcagcaggcagacatctacctga 96016 Query: 829 aggcccttcttatcatggtcggggttctcgtgattgcaagcct 871 ||||||| || |||||||| || |||| ||| |||||||||| Sbjct: 96017 aggccctgctaatcatggttggatttcttgtggttgcaagcct 96059 Score = 48.1 bits (24), Expect = 0.074 Identities = 27/28 (96%) Strand = Plus / Plus Query: 163 gcaagatggctgccaatgttggggaatc 190 |||||||||| ||||||||||||||||| Sbjct: 95366 gcaagatggcagccaatgttggggaatc 95393
>dbj|AK068558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153F20, full insert sequence Length = 1906 Score = 252 bits (127), Expect = 3e-63 Identities = 262/307 (85%) Strand = Plus / Plus Query: 217 gcgatgcagccggagggagcttcgagtgcaatatctgctttgagttgccacaagagccaa 276 |||||||||| || |||||||| || ||||||||||||||||| ||||||||||| |||| Sbjct: 926 gcgatgcagctggggggagctttgaatgcaatatctgctttgaattgccacaagaaccaa 985 Query: 277 tagtaactctctgcggccacctattctgctggccgtgcctctacagatggctgcacatgc 336 |||| |||||||| |||||||| ||||||||||| || | ||||| ||| ||||||| | Sbjct: 986 tagttactctctgtggccacctcttctgctggccatgtatttacaggtggttgcacatcc 1045 Query: 337 acgcgaacacgccagagtgccctgtgtgcaaggccattgttgaagaagacaagcttgtcc 396 |||| || | ||||||||||| |||||||| || | |||||||| || ||||| || | Sbjct: 1046 acgcacactctccagagtgcccggtgtgcaaagctgtcgttgaagaggataagctcgttc 1105 Query: 397 ccctttatggccgtggcaaggaccgcgtcgacccaaggtcaaagaacacgcctggcgccg 456 |||||||||| |||||||||||||||||||| |||||||||||||||| || | || | Sbjct: 1106 ccctttatgggcgtggcaaggaccgcgtcgatccaaggtcaaagaacatacccgaggctg 1165 Query: 457 acattcctcagcgcccagctggccagaggcccgcgacagccccacaggctgatccaaaca 516 |||||||| | |||||| ||||||||||||| || ||||| |||||||| ||||| |||| Sbjct: 1166 acattcctaaccgcccaactggccagaggcctgccacagctccacaggccgatcctaaca 1225 Query: 517 acaattt 523 ||||||| Sbjct: 1226 acaattt 1232 Score = 141 bits (71), Expect = 7e-30 Identities = 231/283 (81%), Gaps = 6/283 (2%) Strand = Plus / Plus Query: 592 tggcgaatgcacggtggggcaactatgcgttctcggccgcattcgggggcctgttcccca 651 |||| |||||||||||||| || ||||| ||||| || || || || ||||| ||||| | Sbjct: 1292 tggctaatgcacggtgggggaattatgcattctcagctgcgtttggaggcctattcccta 1351 Query: 652 tgctcagcttccaaatgcatgggtttccagatccagccgcatatgcccagccggctgggt 711 |||| ||||||||| ||||||| ||||||||| || | ||||| ||||| ||||||| Sbjct: 1352 tgcttagcttccaagtgcatggatttccagatgcaaatccttatgcacagcctgctgggt 1411 Query: 712 ttcactatgggtttggccatggccatgggttccatggcgggcatatggggc---ctgccc 768 |||||||||||| ||||||||| ||||| ||||||||||| |||||||| | | |||| Sbjct: 1412 ttcactatgggtatggccatggtcatggattccatggcggacatatgggtcatgccgccc 1471 Query: 769 acggcgtcccccgtcaagggccgctagggcagcagcagcagcaggcggatgtctacctga 828 |||| ||||| || ||||| || || | |||| | ||||||||| || ||||||||| Sbjct: 1472 acggtgtccctcgacaaggaccact---ggagcaaccgcagcaggcagacatctacctga 1528 Query: 829 aggcccttcttatcatggtcggggttctcgtgattgcaagcct 871 ||||||| || |||||||| || |||| ||| |||||||||| Sbjct: 1529 aggccctgctaatcatggttggatttcttgtggttgcaagcct 1571 Score = 48.1 bits (24), Expect = 0.074 Identities = 27/28 (96%) Strand = Plus / Plus Query: 163 gcaagatggctgccaatgttggggaatc 190 |||||||||| ||||||||||||||||| Sbjct: 878 gcaagatggcagccaatgttggggaatc 905
>gb|DQ245637.1| Zea mays clone 18582 mRNA sequence Length = 1036 Score = 250 bits (126), Expect = 1e-62 Identities = 249/290 (85%) Strand = Plus / Plus Query: 209 cagcagcagcgatgcagccggagggagcttcgagtgcaatatctgctttgagttgccaca 268 |||||||||||||||||| || |||||||| |||||||| || ||||| ||| |||| || Sbjct: 168 cagcagcagcgatgcagctggggggagctttgagtgcaacatatgcttcgagctgcctca 227 Query: 269 agagccaatagtaactctctgcggccacctattctgctggccgtgcctctacagatggct 328 ||||||||||| |||||||| |||||||| ||||||||||||||||| ||| | ||||| Sbjct: 228 ggagccaatagtgactctctgtggccacctcttctgctggccgtgcctttaccggtggct 287 Query: 329 gcacatgcacgcgaacacgccagagtgccctgtgtgcaaggccattgttgaagaagacaa 388 |||||| ||||| || ||||||||||||| |||||||||||| | || || || ||||| Sbjct: 288 gcacattcacgcacactcgccagagtgcccagtgtgcaaggccctcgtggaggaggacaa 347 Query: 389 gcttgtccccctttatggccgtggcaaggaccgcgtcgacccaaggtcaaagaacacgcc 448 ||| |||||||||||||| ||||||||||| ||||||||||| ||||| ||||||| ||| Sbjct: 348 gctcgtccccctttatgggcgtggcaaggatcgcgtcgacccgaggtcgaagaacatgcc 407 Query: 449 tggcgccgacattcctcagcgcccagctggccagaggcccgcgacagccc 498 | | ||| |||||||| |||||| | ||||||||||| || ||||||| Sbjct: 408 cgagggcgagattcctcaccgcccaacgggccagaggcctgccacagccc 457 Score = 81.8 bits (41), Expect = 5e-12 Identities = 113/137 (82%) Strand = Plus / Plus Query: 585 gtcccgctggcgaatgcacggtggggcaactatgcgttctcggccgcattcgggggcctg 644 ||||| ||||| ||||| || ||||| ||||| || ||||| || || |||||||| ||| Sbjct: 523 gtccctctggcaaatgcgcgatgggggaactacgcattctcagctgctttcgggggactg 582 Query: 645 ttccccatgctcagcttccaaatgcatgggtttccagatccagccgcatatgcccagccg 704 ||||| ||||| ||||||||| | ||||||||||||||| | ||||| | || ||||| Sbjct: 583 ttccctatgcttagcttccaagtccatgggtttccagatgccgccgctttcgcgcagcct 642 Query: 705 gctgggtttcactatgg 721 | |||||| |||||||| Sbjct: 643 ggtgggttccactatgg 659 Score = 56.0 bits (28), Expect = 3e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 795 gggcagcagcagcagcaggcggatgtctacctgaaggcccttcttatcatggtcggggtt 854 ||||| |||||||||||||| ||| |||| ||||||||||| ||| ||||| | | || Sbjct: 748 gggcaacagcagcagcaggcagatatctatctgaaggccctgcttttcatgattgtaatt 807 Query: 855 ctcgtgattgcaagcctcctcgcg 878 || ||| | ||||||||||||||| Sbjct: 808 ctagtgctcgcaagcctcctcgcg 831
>gb|BT017562.1| Zea mays clone EL01N0425G08.c mRNA sequence Length = 731 Score = 208 bits (105), Expect = 3e-50 Identities = 261/313 (83%) Strand = Plus / Plus Query: 208 gcagcagcagcgatgcagccggagggagcttcgagtgcaatatctgctttgagttgccac 267 ||||||||| ||||||||| || |||||||| || || || || ||||||||| |||| | Sbjct: 192 gcagcagcaacgatgcagctggggggagctttgaatgtaacatatgctttgagctgcctc 251 Query: 268 aagagccaatagtaactctctgcggccacctattctgctggccgtgcctctacagatggc 327 ||||||||||||| ||||| || |||||||| ||||||||||| ||||| ||| | |||| Sbjct: 252 aagagccaatagtgactctttgtggccacctcttctgctggccatgcctttaccggtggc 311 Query: 328 tgcacatgcacgcgaacacgccagagtgccctgtgtgcaaggccattgttgaagaagaca 387 ||||||| || || | ||||||||||||| ||||||||||| |||| || ||||||| Sbjct: 312 tgcacatccatgcacattcgccagagtgcccagtgtgcaaggctcttgtggaggaagaca 371 Query: 388 agcttgtccccctttatggccgtggcaaggaccgcgtcgacccaaggtcaaagaacacgc 447 ||||||| ||||||||||| || |||||||| || || ||||||||||||||||||| || Sbjct: 372 agcttgttcccctttatggacgcggcaaggatcgtgttgacccaaggtcaaagaacatgc 431 Query: 448 ctggcgccgacattcctcagcgcccagctggccagaggcccgcgacagccccacaggctg 507 | | | || |||||||| |||||| |||| |||||||| || ||||||| ||||| | Sbjct: 432 ccgagggtgagattcctcaccgcccaactggtcagaggcctgccccagccccccaggccg 491 Query: 508 atccaaacaacaa 520 || | |||||||| Sbjct: 492 atgctaacaacaa 504 Score = 129 bits (65), Expect = 3e-26 Identities = 143/169 (84%) Strand = Plus / Plus Query: 592 tggcgaatgcacggtggggcaactatgcgttctcggccgcattcgggggcctgttcccca 651 |||| ||||| || ||||| ||||| || ||||| || || |||||||| || ||||| | Sbjct: 561 tggctaatgcgcgctgggggaactacgcattctcagctgctttcgggggactattcccta 620 Query: 652 tgctcagcttccaaatgcatgggtttccagatccagccgcatatgcccagccggctgggt 711 |||| ||||||||| | ||||||||||||||| | || || ||||| ||||| ||||||| Sbjct: 621 tgcttagcttccaagttcatgggtttccagatgctgctgcttatgcgcagcctgctgggt 680 Query: 712 ttcactatgggtttggccatggccatgggttccatggcgggcatatggg 760 | |||||||||| ||||||||| ||||| ||||||||||| |||||||| Sbjct: 681 tccactatgggtatggccatgggcatggattccatggcggccatatggg 729
>emb|CT831839.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA030C11, full insert sequence Length = 1033 Score = 170 bits (86), Expect = 7e-39 Identities = 212/254 (83%) Strand = Plus / Plus Query: 234 agcttcgagtgcaatatctgctttgagttgccacaagagccaatagtaactctctgcggc 293 |||||||||||||| || ||||||||| | || || ||||| || || || ||||| ||| Sbjct: 156 agcttcgagtgcaacatatgctttgagcttccgcaggagcctattgtcacgctctgtggc 215 Query: 294 cacctattctgctggccgtgcctctacagatggctgcacatgcacgcgaacacgccagag 353 ||||| ||||||||||| |||||||||| ||||||||||| ||| || | | || ||| Sbjct: 216 cacctcttctgctggccatgcctctacaagtggctgcacatccactcgcattcacctgag 275 Query: 354 tgccctgtgtgcaaggccattgttgaagaagacaagcttgtccccctttatggccgtggc 413 ||||| || |||||||| |||| || || || |||||||||||||| ||||||||||| Sbjct: 276 tgcccggtctgcaaggctgttgtcgaggaggataagcttgtccccctctatggccgtggt 335 Query: 414 aaggaccgcgtcgacccaaggtcaaagaacacgcctggcgccgacattcctcagcgccca 473 |||||||| || |||||||||||||||||| ||||| || ||||||||| | |||||| Sbjct: 336 aaggaccgtgttgacccaaggtcaaagaacgtccctggggctgacattcctaatcgccca 395 Query: 474 gctggccagaggcc 487 ||||| |||||||| Sbjct: 396 gctggacagaggcc 409 Score = 75.8 bits (38), Expect = 3e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 597 aatgcacggtggggcaactatgcgttctcggccgcattcgggggcctgttccccatgctc 656 |||||||||||||| || || | |||||||| ||||| ||||| |||||||| ||||| Sbjct: 498 aatgcacggtgggggaattacaccttctcggcggcatttgggggtttgttccccctgctc 557 Query: 657 agcttccaaatgcatgggtttccagatccagccgcatatgcccagccggctgggtttc 714 ||||||||| | |||||||| |||||| || |||| |||| ||||| ||||| |||| Sbjct: 558 agcttccaagtccatgggttcccagatgcaaccgcctatgggcagcctgctggttttc 615 Score = 67.9 bits (34), Expect = 8e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 807 cagcaggcggatgtctacctgaaggcccttcttatcatggtcggggttctcgtgattgca 866 |||||||||||||| ||||||||||| ||||| ||| |||| || |||| ||||||||| Sbjct: 720 cagcaggcggatgtgtacctgaaggcgcttctcatcctggttggttttcttgtgattgca 779 Query: 867 agcctc 872 |||||| Sbjct: 780 agcctc 785
>ref|NM_001073893.1| Oryza sativa (japonica cultivar-group) Os12g0636000 (Os12g0636000) mRNA, complete cds Length = 1156 Score = 170 bits (86), Expect = 7e-39 Identities = 212/254 (83%) Strand = Plus / Plus Query: 234 agcttcgagtgcaatatctgctttgagttgccacaagagccaatagtaactctctgcggc 293 |||||||||||||| || ||||||||| | || || ||||| || || || ||||| ||| Sbjct: 149 agcttcgagtgcaacatatgctttgagcttccgcaggagcctattgtcacgctctgtggc 208 Query: 294 cacctattctgctggccgtgcctctacagatggctgcacatgcacgcgaacacgccagag 353 ||||| ||||||||||| |||||||||| ||||||||||| ||| || | | || ||| Sbjct: 209 cacctcttctgctggccatgcctctacaagtggctgcacatccactcgcattcacctgag 268 Query: 354 tgccctgtgtgcaaggccattgttgaagaagacaagcttgtccccctttatggccgtggc 413 ||||| || |||||||| |||| || || || |||||||||||||| ||||||||||| Sbjct: 269 tgcccggtctgcaaggctgttgtcgaggaggataagcttgtccccctctatggccgtggt 328 Query: 414 aaggaccgcgtcgacccaaggtcaaagaacacgcctggcgccgacattcctcagcgccca 473 |||||||| || |||||||||||||||||| ||||| || ||||||||| | |||||| Sbjct: 329 aaggaccgtgttgacccaaggtcaaagaacgtccctggggctgacattcctaatcgccca 388 Query: 474 gctggccagaggcc 487 ||||| |||||||| Sbjct: 389 gctggacagaggcc 402 Score = 75.8 bits (38), Expect = 3e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 597 aatgcacggtggggcaactatgcgttctcggccgcattcgggggcctgttccccatgctc 656 |||||||||||||| || || | |||||||| ||||| ||||| |||||||| ||||| Sbjct: 491 aatgcacggtgggggaattacaccttctcggcggcatttgggggtttgttccccctgctc 550 Query: 657 agcttccaaatgcatgggtttccagatccagccgcatatgcccagccggctgggtttc 714 ||||||||| | |||||||| |||||| || |||| |||| ||||| ||||| |||| Sbjct: 551 agcttccaagtccatgggttcccagatgcaaccgcctatgggcagcctgctggttttc 608 Score = 67.9 bits (34), Expect = 8e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 807 cagcaggcggatgtctacctgaaggcccttcttatcatggtcggggttctcgtgattgca 866 |||||||||||||| ||||||||||| ||||| ||| |||| || |||| ||||||||| Sbjct: 713 cagcaggcggatgtgtacctgaaggcgcttctcatcctggttggttttcttgtgattgca 772 Query: 867 agcctc 872 |||||| Sbjct: 773 agcctc 778
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 170 bits (86), Expect = 7e-39 Identities = 212/254 (83%) Strand = Plus / Plus Query: 234 agcttcgagtgcaatatctgctttgagttgccacaagagccaatagtaactctctgcggc 293 |||||||||||||| || ||||||||| | || || ||||| || || || ||||| ||| Sbjct: 27301041 agcttcgagtgcaacatatgctttgagcttccgcaggagcctattgtcacgctctgtggc 27301100 Query: 294 cacctattctgctggccgtgcctctacagatggctgcacatgcacgcgaacacgccagag 353 ||||| ||||||||||| |||||||||| ||||||||||| ||| || | | || ||| Sbjct: 27301101 cacctcttctgctggccatgcctctacaagtggctgcacatccactcgcattcacctgag 27301160 Query: 354 tgccctgtgtgcaaggccattgttgaagaagacaagcttgtccccctttatggccgtggc 413 ||||| || |||||||| |||| || || || |||||||||||||| ||||||||||| Sbjct: 27301161 tgcccggtctgcaaggctgttgtcgaggaggataagcttgtccccctctatggccgtggt 27301220 Query: 414 aaggaccgcgtcgacccaaggtcaaagaacacgcctggcgccgacattcctcagcgccca 473 |||||||| || |||||||||||||||||| ||||| || ||||||||| | |||||| Sbjct: 27301221 aaggaccgtgttgacccaaggtcaaagaacgtccctggggctgacattcctaatcgccca 27301280 Query: 474 gctggccagaggcc 487 ||||| |||||||| Sbjct: 27301281 gctggacagaggcc 27301294 Score = 75.8 bits (38), Expect = 3e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 597 aatgcacggtggggcaactatgcgttctcggccgcattcgggggcctgttccccatgctc 656 |||||||||||||| || || | |||||||| ||||| ||||| |||||||| ||||| Sbjct: 27301383 aatgcacggtgggggaattacaccttctcggcggcatttgggggtttgttccccctgctc 27301442 Query: 657 agcttccaaatgcatgggtttccagatccagccgcatatgcccagccggctgggtttc 714 ||||||||| | |||||||| |||||| || |||| |||| ||||| ||||| |||| Sbjct: 27301443 agcttccaagtccatgggttcccagatgcaaccgcctatgggcagcctgctggttttc 27301500 Score = 67.9 bits (34), Expect = 8e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 807 cagcaggcggatgtctacctgaaggcccttcttatcatggtcggggttctcgtgattgca 866 |||||||||||||| ||||||||||| ||||| ||| |||| || |||| ||||||||| Sbjct: 27301605 cagcaggcggatgtgtacctgaaggcgcttctcatcctggttggttttcttgtgattgca 27301664 Query: 867 agcctc 872 |||||| Sbjct: 27301665 agcctc 27301670
>dbj|AK099519.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013030E05, full insert sequence Length = 1092 Score = 170 bits (86), Expect = 7e-39 Identities = 212/254 (83%) Strand = Plus / Plus Query: 234 agcttcgagtgcaatatctgctttgagttgccacaagagccaatagtaactctctgcggc 293 |||||||||||||| || ||||||||| | || || ||||| || || || ||||| ||| Sbjct: 152 agcttcgagtgcaacatatgctttgagcttccgcaggagcctattgtcacgctctgtggc 211 Query: 294 cacctattctgctggccgtgcctctacagatggctgcacatgcacgcgaacacgccagag 353 ||||| ||||||||||| |||||||||| ||||||||||| ||| || | | || ||| Sbjct: 212 cacctcttctgctggccatgcctctacaagtggctgcacatccactcgcattcacctgag 271 Query: 354 tgccctgtgtgcaaggccattgttgaagaagacaagcttgtccccctttatggccgtggc 413 ||||| || |||||||| |||| || || || |||||||||||||| ||||||||||| Sbjct: 272 tgcccggtctgcaaggctgttgtcgaggaggataagcttgtccccctctatggccgtggt 331 Query: 414 aaggaccgcgtcgacccaaggtcaaagaacacgcctggcgccgacattcctcagcgccca 473 |||||||| || |||||||||||||||||| ||||| || ||||||||| | |||||| Sbjct: 332 aaggaccgtgttgacccaaggtcaaagaacgtccctggggctgacattcctaatcgccca 391 Query: 474 gctggccagaggcc 487 ||||| |||||||| Sbjct: 392 gctggacagaggcc 405 Score = 75.8 bits (38), Expect = 3e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 597 aatgcacggtggggcaactatgcgttctcggccgcattcgggggcctgttccccatgctc 656 |||||||||||||| || || | |||||||| ||||| ||||| |||||||| ||||| Sbjct: 494 aatgcacggtgggggaattacaccttctcggcggcatttgggggtttgttccccctgctc 553 Query: 657 agcttccaaatgcatgggtttccagatccagccgcatatgcccagccggctgggtttc 714 ||||||||| | |||||||| |||||| || |||| |||| ||||| ||||| |||| Sbjct: 554 agcttccaagtccatgggttcccagatgcaaccgcctatgggcagcctgctggttttc 611 Score = 67.9 bits (34), Expect = 8e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 807 cagcaggcggatgtctacctgaaggcccttcttatcatggtcggggttctcgtgattgca 866 |||||||||||||| ||||||||||| ||||| ||| |||| || |||| ||||||||| Sbjct: 716 cagcaggcggatgtgtacctgaaggcgcttctcatcctggttggttttcttgtgattgca 775 Query: 867 agcctc 872 |||||| Sbjct: 776 agcctc 781
>dbj|AK062128.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-D12, full insert sequence Length = 1156 Score = 170 bits (86), Expect = 7e-39 Identities = 212/254 (83%) Strand = Plus / Plus Query: 234 agcttcgagtgcaatatctgctttgagttgccacaagagccaatagtaactctctgcggc 293 |||||||||||||| || ||||||||| | || || ||||| || || || ||||| ||| Sbjct: 149 agcttcgagtgcaacatatgctttgagcttccgcaggagcctattgtcacgctctgtggc 208 Query: 294 cacctattctgctggccgtgcctctacagatggctgcacatgcacgcgaacacgccagag 353 ||||| ||||||||||| |||||||||| ||||||||||| ||| || | | || ||| Sbjct: 209 cacctcttctgctggccatgcctctacaagtggctgcacatccactcgcattcacctgag 268 Query: 354 tgccctgtgtgcaaggccattgttgaagaagacaagcttgtccccctttatggccgtggc 413 ||||| || |||||||| |||| || || || |||||||||||||| ||||||||||| Sbjct: 269 tgcccggtctgcaaggctgttgtcgaggaggataagcttgtccccctctatggccgtggt 328 Query: 414 aaggaccgcgtcgacccaaggtcaaagaacacgcctggcgccgacattcctcagcgccca 473 |||||||| || |||||||||||||||||| ||||| || ||||||||| | |||||| Sbjct: 329 aaggaccgtgttgacccaaggtcaaagaacgtccctggggctgacattcctaatcgccca 388 Query: 474 gctggccagaggcc 487 ||||| |||||||| Sbjct: 389 gctggacagaggcc 402 Score = 75.8 bits (38), Expect = 3e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 597 aatgcacggtggggcaactatgcgttctcggccgcattcgggggcctgttccccatgctc 656 |||||||||||||| || || | |||||||| ||||| ||||| |||||||| ||||| Sbjct: 491 aatgcacggtgggggaattacaccttctcggcggcatttgggggtttgttccccctgctc 550 Query: 657 agcttccaaatgcatgggtttccagatccagccgcatatgcccagccggctgggtttc 714 ||||||||| | |||||||| |||||| || |||| |||| ||||| ||||| |||| Sbjct: 551 agcttccaagtccatgggttcccagatgcaaccgcctatgggcagcctgctggttttc 608 Score = 67.9 bits (34), Expect = 8e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 807 cagcaggcggatgtctacctgaaggcccttcttatcatggtcggggttctcgtgattgca 866 |||||||||||||| ||||||||||| ||||| ||| |||| || |||| ||||||||| Sbjct: 713 cagcaggcggatgtgtacctgaaggcgcttctcatcctggttggttttcttgtgattgca 772 Query: 867 agcctc 872 |||||| Sbjct: 773 agcctc 778
>emb|AL831809.3|CNS08CAM Oryza sativa chromosome 12, . BAC OJ1268_D02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146585 Score = 170 bits (86), Expect = 7e-39 Identities = 212/254 (83%) Strand = Plus / Plus Query: 234 agcttcgagtgcaatatctgctttgagttgccacaagagccaatagtaactctctgcggc 293 |||||||||||||| || ||||||||| | || || ||||| || || || ||||| ||| Sbjct: 114073 agcttcgagtgcaacatatgctttgagcttccgcaggagcctattgtcacgctctgtggc 114132 Query: 294 cacctattctgctggccgtgcctctacagatggctgcacatgcacgcgaacacgccagag 353 ||||| ||||||||||| |||||||||| ||||||||||| ||| || | | || ||| Sbjct: 114133 cacctcttctgctggccatgcctctacaagtggctgcacatccactcgcattcacctgag 114192 Query: 354 tgccctgtgtgcaaggccattgttgaagaagacaagcttgtccccctttatggccgtggc 413 ||||| || |||||||| |||| || || || |||||||||||||| ||||||||||| Sbjct: 114193 tgcccggtctgcaaggctgttgtcgaggaggataagcttgtccccctctatggccgtggt 114252 Query: 414 aaggaccgcgtcgacccaaggtcaaagaacacgcctggcgccgacattcctcagcgccca 473 |||||||| || |||||||||||||||||| ||||| || ||||||||| | |||||| Sbjct: 114253 aaggaccgtgttgacccaaggtcaaagaacgtccctggggctgacattcctaatcgccca 114312 Query: 474 gctggccagaggcc 487 ||||| |||||||| Sbjct: 114313 gctggacagaggcc 114326 Score = 75.8 bits (38), Expect = 3e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 597 aatgcacggtggggcaactatgcgttctcggccgcattcgggggcctgttccccatgctc 656 |||||||||||||| || || | |||||||| ||||| ||||| |||||||| ||||| Sbjct: 114415 aatgcacggtgggggaattacaccttctcggcggcatttgggggtttgttccccctgctc 114474 Query: 657 agcttccaaatgcatgggtttccagatccagccgcatatgcccagccggctgggtttc 714 ||||||||| | |||||||| |||||| || |||| |||| ||||| ||||| |||| Sbjct: 114475 agcttccaagtccatgggttcccagatgcaaccgcctatgggcagcctgctggttttc 114532 Score = 67.9 bits (34), Expect = 8e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 807 cagcaggcggatgtctacctgaaggcccttcttatcatggtcggggttctcgtgattgca 866 |||||||||||||| ||||||||||| ||||| ||| |||| || |||| ||||||||| Sbjct: 114637 cagcaggcggatgtgtacctgaaggcgcttctcatcctggttggttttcttgtgattgca 114696 Query: 867 agcctc 872 |||||| Sbjct: 114697 agcctc 114702
>gb|AY110835.1| Zea mays CL46086_1 mRNA sequence Length = 842 Score = 135 bits (68), Expect = 4e-28 Identities = 166/199 (83%), Gaps = 1/199 (0%) Strand = Plus / Minus Query: 282 actctctgcggccacctattctgctggccgtgcctctacagatggctgcacatgcacgcg 341 |||||||| |||||||| ||||||||||||||||| ||| | ||||||||||| ||||| Sbjct: 839 actctctg-ggccacctcttctgctggccgtgcctttaccggtggctgcacattcacgca 781 Query: 342 aacacgccagagtgccctgtgtgcaaggccattgttgaagaagacaagcttgtccccctt 401 || ||||||||||||| |||||||||||| | || || || |||||||| || || Sbjct: 780 cactcgccagagtgcccagtgtgcaaggccctcgtggaggaggacaagctcgtnnnnntt 721 Query: 402 tatggccgtggcaaggaccgcgtcgacccaaggtcaaagaacacgcctggcgccgacatt 461 ||||| ||||||||||| ||||||||||| ||||| ||||||| ||| | | ||| ||| Sbjct: 720 tatgggcgtggcaaggatcgcgtcgacccgaggtcgaagaacatgcccgagggcgagatt 661 Query: 462 cctcagcgcccagctggcc 480 ||||| |||||| |||||| Sbjct: 660 cctcaccgcccaactggcc 642 Score = 71.9 bits (36), Expect = 5e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 642 ctgttccccatgctcagcttccaaatgcatgggtttccagatccagccgcatatgcccag 701 |||||||| ||||| ||||||||| | ||||||||||||||| | ||||| || || ||| Sbjct: 501 ctgttccctatgcttagcttccaagttcatgggtttccagatgccgccgcttacgcgcag 442 Query: 702 ccggctgggtttcactatgg 721 || |||||||| |||||||| Sbjct: 441 cctgctgggttccactatgg 422 Score = 42.1 bits (21), Expect = 4.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 795 gggcagcagcagcagcaggcggatgtctacctgaaggccct 835 ||||| || ||||||||||| ||| |||| ||||||||||| Sbjct: 333 gggcaccaacagcagcaggcagatatctatctgaaggccct 293
>emb|CT828714.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN041G16, full insert sequence Length = 1411 Score = 63.9 bits (32), Expect = 1e-06 Identities = 35/36 (97%) Strand = Plus / Plus Query: 285 ctctgcggccacctattctgctggccgtgcctctac 320 |||||||||||||| ||||||||||||||||||||| Sbjct: 477 ctctgcggccacctcttctgctggccgtgcctctac 512
>ref|NM_001050889.1| Oryza sativa (japonica cultivar-group) Os01g0766200 (Os01g0766200) mRNA, partial cds Length = 1381 Score = 63.9 bits (32), Expect = 1e-06 Identities = 35/36 (97%) Strand = Plus / Plus Query: 285 ctctgcggccacctattctgctggccgtgcctctac 320 |||||||||||||| ||||||||||||||||||||| Sbjct: 479 ctctgcggccacctcttctgctggccgtgcctctac 514
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 63.9 bits (32), Expect = 1e-06 Identities = 35/36 (97%) Strand = Plus / Minus Query: 285 ctctgcggccacctattctgctggccgtgcctctac 320 |||||||||||||| ||||||||||||||||||||| Sbjct: 32270743 ctctgcggccacctcttctgctggccgtgcctctac 32270708
>dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0403C05 Length = 151085 Score = 63.9 bits (32), Expect = 1e-06 Identities = 35/36 (97%) Strand = Plus / Minus Query: 285 ctctgcggccacctattctgctggccgtgcctctac 320 |||||||||||||| ||||||||||||||||||||| Sbjct: 141496 ctctgcggccacctcttctgctggccgtgcctctac 141461
>dbj|AP003377.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0053G03 Length = 101901 Score = 63.9 bits (32), Expect = 1e-06 Identities = 35/36 (97%) Strand = Plus / Minus Query: 285 ctctgcggccacctattctgctggccgtgcctctac 320 |||||||||||||| ||||||||||||||||||||| Sbjct: 3028 ctctgcggccacctcttctgctggccgtgcctctac 2993
>dbj|AK070278.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049F08, full insert sequence Length = 1579 Score = 63.9 bits (32), Expect = 1e-06 Identities = 35/36 (97%) Strand = Plus / Plus Query: 285 ctctgcggccacctattctgctggccgtgcctctac 320 |||||||||||||| ||||||||||||||||||||| Sbjct: 742 ctctgcggccacctcttctgctggccgtgcctctac 777
>dbj|AK069471.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023M16, full insert sequence Length = 1382 Score = 63.9 bits (32), Expect = 1e-06 Identities = 35/36 (97%) Strand = Plus / Plus Query: 285 ctctgcggccacctattctgctggccgtgcctctac 320 |||||||||||||| ||||||||||||||||||||| Sbjct: 480 ctctgcggccacctcttctgctggccgtgcctctac 515
>gb|BT018923.1| Zea mays clone Contig34.F mRNA sequence Length = 1118 Score = 61.9 bits (31), Expect = 5e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 285 ctctgcggccacctattctgctggccgtgcctctacagatggctgcacatgcacgcgaac 344 |||||||||||||| ||||||||||| ||||||||| ||||| ||| |||||||| || Sbjct: 319 ctctgcggccacctcttctgctggccatgcctctacgagtggctccacgtgcacgcgcac 378 Query: 345 acgccagagtgccctgtgtgcaaggcc 371 | | |||||||| || ||||||||| Sbjct: 379 tcccaggagtgccccgtctgcaaggcc 405
>gb|AY347825.1| Malus x domestica clone 13-4 unknown mRNA Length = 322 Score = 46.1 bits (23), Expect = 0.29 Identities = 32/35 (91%) Strand = Plus / Plus Query: 288 tgcggccacctattctgctggccgtgcctctacag 322 ||||||||||| || |||||||| ||||||||||| Sbjct: 270 tgcggccacctcttttgctggccttgcctctacag 304
>gb|AC007601.7| Homo sapiens chromosome 16 clone RP11-276H1, complete sequence Length = 161864 Score = 46.1 bits (23), Expect = 0.29 Identities = 23/23 (100%) Strand = Plus / Minus Query: 203 tggcagcagcagcagcgatgcag 225 ||||||||||||||||||||||| Sbjct: 26720 tggcagcagcagcagcgatgcag 26698
>ref|XM_418667.2| PREDICTED: Gallus gallus similar to Sarcoglycan, epsilon (LOC420567), mRNA Length = 1687 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 796 ggcagcagcagcagcaggcgga 817 |||||||||||||||||||||| Sbjct: 113 ggcagcagcagcagcaggcgga 134
>ref|NM_001067771.1| Oryza sativa (japonica cultivar-group) Os08g0205700 (Os08g0205700) mRNA, complete cds Length = 937 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 794 agggcagcagcagcagcaggcg 815 |||||||||||||||||||||| Sbjct: 605 agggcagcagcagcagcaggcg 584
>ref|NM_001067770.1| Oryza sativa (japonica cultivar-group) Os08g0205800 (Os08g0205800) mRNA, complete cds Length = 276 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 794 agggcagcagcagcagcaggcg 815 |||||||||||||||||||||| Sbjct: 60 agggcagcagcagcagcaggcg 81
>ref|NM_001067593.1| Oryza sativa (japonica cultivar-group) Os08g0162300 (Os08g0162300) mRNA, partial cds Length = 2522 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 234 agcttcgagtgcaatatctgctttga 259 |||||||| ||||||||||||||||| Sbjct: 1179 agcttcgaatgcaatatctgctttga 1154
>ref|NM_001067592.1| Oryza sativa (japonica cultivar-group) Os08g0162400 (Os08g0162400) mRNA, complete cds Length = 1953 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 234 agcttcgagtgcaatatctgctttga 259 |||||||| ||||||||||||||||| Sbjct: 1123 agcttcgaatgcaatatctgctttga 1148
>ref|XM_363932.1| Magnaporthe grisea 70-15 predicted protein (MG01858.4) partial mRNA Length = 2571 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 798 cagcagcagcagcaggcggatg 819 |||||||||||||||||||||| Sbjct: 2203 cagcagcagcagcaggcggatg 2224
>gb|AC108875.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_C08, complete sequence Length = 132017 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 951 tttcagtttgtatgtatggagtgtcc 976 |||||||||||||||||||| ||||| Sbjct: 14380 tttcagtttgtatgtatggattgtcc 14355
>gb|AC130607.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0017D10, complete sequence Length = 149870 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 951 tttcagtttgtatgtatggagtgtcc 976 |||||||||||||||||||| ||||| Sbjct: 124044 tttcagtttgtatgtatggattgtcc 124019
>gb|AC138230.5| Homo sapiens chromosome 11, clone RP13-317D12, complete sequence Length = 187160 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 554 gggcgtgggtggcgcaggggcgggggcggg 583 |||||| || |||||||||||||||||||| Sbjct: 123978 gggcgtcggcggcgcaggggcgggggcggg 124007
>gb|AC094527.7| Rattus norvegicus 5 BAC CH230-4L11 (Children's Hospital Oakland Research Institute) complete sequence Length = 216616 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 791 gctagggcagcagcagcagcag 812 |||||||||||||||||||||| Sbjct: 168366 gctagggcagcagcagcagcag 168345
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 234 agcttcgagtgcaatatctgctttga 259 |||||||| ||||||||||||||||| Sbjct: 3680543 agcttcgaatgcaatatctgctttga 3680518 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 794 agggcagcagcagcagcaggcg 815 |||||||||||||||||||||| Sbjct: 6162342 agggcagcagcagcagcaggcg 6162363
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 951 tttcagtttgtatgtatggagtgtcc 976 |||||||||||||||||||| ||||| Sbjct: 20125719 tttcagtttgtatgtatggattgtcc 20125694 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 796 ggcagcagcagcagcaggcgg 816 ||||||||||||||||||||| Sbjct: 24092295 ggcagcagcagcagcaggcgg 24092315
>ref|NM_204232.1| Gallus gallus HIR histone cell cycle regulation defective homolog A (S. cerevisiae) (HIRA), mRNA emb|X99375.1|GGCHIRA G.gallus mRNA for Chira protein Length = 3144 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 796 ggcagcagcagcagcaggcgga 817 |||||||||||||||||||||| Sbjct: 1283 ggcagcagcagcagcaggcgga 1304
>gb|AC137894.5| Homo sapiens chromosome 11, clone RP13-46H24, complete sequence Length = 165000 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 554 gggcgtgggtggcgcaggggcgggggcggg 583 |||||| || |||||||||||||||||||| Sbjct: 28864 gggcgtcggcggcgcaggggcgggggcggg 28893
>emb|AL627248.7| Zebrafish DNA sequence from clone RP71-1G18 in linkage group 2 Contains three novel genes, a novel gene similar to human CASQ1 (calsequestrin 1), six novel genes similar to vertebrate C1Q (gliacolin), a novel gene similar to human HNRPC (heterogeneous nuclear ribonucleoprotein C (C1/C2)), a novel gene for a protein similar to human H326 protein, two novel genes for proteins similar to human apolipoproteins, a novel gene similar to human TEP1 (telomerase-associated protein 1) and a CpG island, complete sequence Length = 143586 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1155 caaagtgaaaattcgtatacct 1176 |||||||||||||||||||||| Sbjct: 121728 caaagtgaaaattcgtatacct 121707
>gb|AC107077.5| Homo sapiens BAC clone RP11-564L12 from 2, complete sequence Length = 124355 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 459 attcctcagcgcccagctggccagag 484 ||||||||| |||||||||||||||| Sbjct: 28792 attcctcagagcccagctggccagag 28767
>dbj|AP005847.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ9990_A01 Length = 101684 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 234 agcttcgagtgcaatatctgctttga 259 |||||||| ||||||||||||||||| Sbjct: 4040 agcttcgaatgcaatatctgctttga 4015
>dbj|AB091180.1| Gallus gallus mRNA for HIRA, complete cds Length = 3060 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 796 ggcagcagcagcagcaggcgga 817 |||||||||||||||||||||| Sbjct: 1220 ggcagcagcagcagcaggcgga 1241
>dbj|AP003875.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1119_C05 Length = 126112 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 794 agggcagcagcagcagcaggcg 815 |||||||||||||||||||||| Sbjct: 25735 agggcagcagcagcagcaggcg 25756
>dbj|AP004565.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0486F07 Length = 154926 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 794 agggcagcagcagcagcaggcg 815 |||||||||||||||||||||| Sbjct: 118359 agggcagcagcagcagcaggcg 118380
>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0577B11 Length = 180355 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 234 agcttcgagtgcaatatctgctttga 259 |||||||| ||||||||||||||||| Sbjct: 159049 agcttcgaatgcaatatctgctttga 159024
>dbj|AK102462.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094D12, full insert sequence Length = 1874 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 234 agcttcgagtgcaatatctgctttga 259 |||||||| ||||||||||||||||| Sbjct: 1049 agcttcgaatgcaatatctgctttga 1074
>emb|BX950342.2| Gallus gallus finished cDNA, clone ChEST169e19 Length = 1914 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 796 ggcagcagcagcagcaggcgga 817 |||||||||||||||||||||| Sbjct: 60 ggcagcagcagcagcaggcgga 81
>dbj|AK067263.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096G17, full insert sequence Length = 2524 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 234 agcttcgagtgcaatatctgctttga 259 |||||||| ||||||||||||||||| Sbjct: 1181 agcttcgaatgcaatatctgctttga 1156
>dbj|AK063453.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-G04, full insert sequence Length = 1952 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 234 agcttcgagtgcaatatctgctttga 259 |||||||| ||||||||||||||||| Sbjct: 1122 agcttcgaatgcaatatctgctttga 1147
>dbj|AK062655.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-E11, full insert sequence Length = 937 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 794 agggcagcagcagcagcaggcg 815 |||||||||||||||||||||| Sbjct: 333 agggcagcagcagcagcaggcg 354
>emb|AL844895.6| Mouse DNA sequence from clone RP23-359N12 on chromosome 2, complete sequence Length = 210427 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 946 ttgaatttcagtttgtatgtat 967 |||||||||||||||||||||| Sbjct: 62843 ttgaatttcagtttgtatgtat 62864
>ref|XM_001232982.1| PREDICTED: Gallus gallus similar to doublesex and mab-3 related transcription factor 1 (LOC769693), mRNA Length = 1507 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 cggtggcagcagcagcagcga 220 ||||||||||||||||||||| Sbjct: 332 cggtggcagcagcagcagcga 352
>ref|XM_414883.2| PREDICTED: Gallus gallus hypothetical LOC416583 (LOC416583), mRNA Length = 1260 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 tcgccgcccgccgcccgctgg 111 ||||||||||||||||||||| Sbjct: 296 tcgccgcccgccgcccgctgg 316
>dbj|AK239820.1| Sus scrofa mRNA, clone:THY010207F10, expressed in thymus Length = 2742 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 795 gggcagcagcagcagcaggcg 815 ||||||||||||||||||||| Sbjct: 299 gggcagcagcagcagcaggcg 319
>ref|XM_521578.2| PREDICTED: Pan troglodytes heparanase 2, transcript variant 3 (HPSE2), mRNA Length = 2482 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 794 agggcagcagcagcagcaggc 814 ||||||||||||||||||||| Sbjct: 1897 agggcagcagcagcagcaggc 1877
>ref|XM_001166336.1| PREDICTED: Pan troglodytes heparanase 2, transcript variant 1 (HPSE2), mRNA Length = 2657 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 794 agggcagcagcagcagcaggc 814 ||||||||||||||||||||| Sbjct: 2072 agggcagcagcagcagcaggc 2052
>ref|XM_001166372.1| PREDICTED: Pan troglodytes heparanase 2, transcript variant 2 (HPSE2), mRNA Length = 2831 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 794 agggcagcagcagcagcaggc 814 ||||||||||||||||||||| Sbjct: 2246 agggcagcagcagcagcaggc 2226
>gb|DQ164800.1| Gallus gallus DMRT1 isoform h mRNA, complete cds, alternatively spliced Length = 475 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 cggtggcagcagcagcagcga 220 ||||||||||||||||||||| Sbjct: 228 cggtggcagcagcagcagcga 248
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 797 gcagcagcagcagcaggcgga 817 ||||||||||||||||||||| Sbjct: 19224332 gcagcagcagcagcaggcgga 19224312
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 288 tgcggccacctattctgctggccgtgcct 316 |||||||| || ||||||||||||||||| Sbjct: 15688678 tgcggccatctgttctgctggccgtgcct 15688650 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 288 tgcggccacctattctgctggccgtgcct 316 |||||||| || ||||||||||||||||| Sbjct: 15691848 tgcggccatctgttctgctggccgtgcct 15691820 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 gtggcagcagcagcagcgatg 222 ||||||||||||||||||||| Sbjct: 19390169 gtggcagcagcagcagcgatg 19390189 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 797 gcagcagcagcagcaggcgga 817 ||||||||||||||||||||| Sbjct: 20334659 gcagcagcagcagcaggcgga 20334679
>gb|AC189237.1| Brassica rapa subsp. pekinensis clone KBrB014O06, complete sequence Length = 105067 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 282 actctctgcggccacctattctgctggcc 310 ||||||||||| ||||| ||||||||||| Sbjct: 67 actctctgcggacaccttttctgctggcc 95
>dbj|AK227225.1| Arabidopsis thaliana mRNA for phosphoglycerate kinase like protein, complete cds, clone: RAFL09-97-M12 Length = 1606 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 ttgttgaagaagacaagcttg 393 ||||||||||||||||||||| Sbjct: 995 ttgttgaagaagacaagcttg 1015
>ref|XR_011939.1| PREDICTED: Macaca mulatta similar to Heparanase-2 (Hpa2) (LOC708795), mRNA Length = 1693 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 794 agggcagcagcagcagcaggc 814 ||||||||||||||||||||| Sbjct: 1634 agggcagcagcagcagcaggc 1614
>gb|DQ481667.1| Takifugu rubripes HoxCa gene cluster, complete sequence Length = 378763 Score = 42.1 bits (21), Expect = 4.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 194 ggcagtcggtggcagcagcagcagc 218 ||||| ||||||||||||||||||| Sbjct: 200660 ggcaggcggtggcagcagcagcagc 200684
>ref|XM_967722.1| PREDICTED: Tribolium castaneum similar to syndecan binding protein (LOC661571), mRNA Length = 1272 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 476 tggccagaggcccgcgacagccccacagg 504 ||||||||| |||||||||||||| |||| Sbjct: 191 tggccagagccccgcgacagccccccagg 219
>ref|XM_965176.1| PREDICTED: Tribolium castaneum similar to ring finger protein 185 (LOC658819), mRNA Length = 959 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 288 tgcggccacctattctgctggccgtgcct 316 ||||| ||||| ||||||||||||||||| Sbjct: 310 tgcggacacctgttctgctggccgtgcct 338
>ref|NM_021828.3| Homo sapiens heparanase 2 (HPSE2), mRNA Length = 2293 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 794 agggcagcagcagcagcaggc 814 ||||||||||||||||||||| Sbjct: 2235 agggcagcagcagcagcaggc 2215
>gb|BC108451.1| Xenopus laevis hypothetical protein LOC445852, mRNA (cDNA clone MGC:130703 IMAGE:7768659), complete cds Length = 2644 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 794 agggcagcagcagcagcaggc 814 ||||||||||||||||||||| Sbjct: 911 agggcagcagcagcagcaggc 931
>ref|NM_118882.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding (AT4G27470) mRNA, complete cds Length = 1102 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 282 actctctgcggccacctattctgctggcc 310 ||||||||||| ||||| ||||||||||| Sbjct: 328 actctctgcgggcaccttttctgctggcc 356
>ref|NM_112114.2| Arabidopsis thaliana PGK1 (PHOSPHOGLYCERATE KINASE 1); phosphoglycerate kinase (PGK1) mRNA, complete cds Length = 1685 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 ttgttgaagaagacaagcttg 393 ||||||||||||||||||||| Sbjct: 1033 ttgttgaagaagacaagcttg 1053
>ref|NM_104498.2| Arabidopsis thaliana phosphoglycerate kinase (AT1G56190) mRNA, complete cds Length = 1670 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 ttgttgaagaagacaagcttg 393 ||||||||||||||||||||| Sbjct: 979 ttgttgaagaagacaagcttg 999
>gb|AC136501.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0044M15, complete sequence Length = 144568 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 200 cggtggcagcagcagcagcgatgcagccg 228 |||||||||| ||||||||||||| |||| Sbjct: 34199 cggtggcagctgcagcagcgatgcggccg 34227
>ref|NM_001007567.1| Mus musculus solute carrier family 7, member 6 opposite strand (Slc7a6os), mRNA gb|BC054118.1| Mus musculus solute carrier family 7, member 6 opposite strand, mRNA (cDNA clone MGC:60796 IMAGE:30021749), complete cds Length = 1325 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 gcggcagtcggtggcagcagc 212 ||||||||||||||||||||| Sbjct: 477 gcggcagtcggtggcagcagc 457
>gb|BC077288.1| Xenopus laevis hypothetical protein LOC445852, mRNA (cDNA clone IMAGE:4965316), partial cds Length = 1700 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 794 agggcagcagcagcagcaggc 814 ||||||||||||||||||||| Sbjct: 940 agggcagcagcagcagcaggc 960
>ref|XM_425816.1| PREDICTED: Gallus gallus similar to prokineticin 1 (LOC428257), mRNA Length = 318 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 794 agggcagcagcagcagcaggc 814 ||||||||||||||||||||| Sbjct: 46 agggcagcagcagcagcaggc 26
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06, complete sequence Length = 187651 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 796 ggcagcagcagcagcaggcgg 816 ||||||||||||||||||||| Sbjct: 160784 ggcagcagcagcagcaggcgg 160804
>gb|AC023175.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-69B14, complete sequence Length = 195667 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 792 ctagggcagcagcagcagcag 812 ||||||||||||||||||||| Sbjct: 45239 ctagggcagcagcagcagcag 45219
>gb|AC023286.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-86C14, complete sequence Length = 190251 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 792 ctagggcagcagcagcagcag 812 ||||||||||||||||||||| Sbjct: 188718 ctagggcagcagcagcagcag 188698
>gb|AY448024.1| Gallus gallus DMRT1 isoform g mRNA, partial cds, alternatively spliced Length = 1136 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 cggtggcagcagcagcagcga 220 ||||||||||||||||||||| Sbjct: 228 cggtggcagcagcagcagcga 248
>gb|AY448023.1| Gallus gallus DMRT1 isoform f mRNA, partial cds, alternatively spliced Length = 570 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 cggtggcagcagcagcagcga 220 ||||||||||||||||||||| Sbjct: 228 cggtggcagcagcagcagcga 248
>gb|AY448021.1| Gallus gallus DMRT1 isoform d mRNA, partial cds, alternatively spliced Length = 862 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 cggtggcagcagcagcagcga 220 ||||||||||||||||||||| Sbjct: 228 cggtggcagcagcagcagcga 248
>gb|AY448020.1| Gallus gallus DMRT1 isoform c mRNA, partial cds, alternatively spliced Length = 796 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 cggtggcagcagcagcagcga 220 ||||||||||||||||||||| Sbjct: 228 cggtggcagcagcagcagcga 248
>gb|AY448019.1| Gallus gallus DMRT1 isoform b mRNA, partial cds, alternatively spliced Length = 1033 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 cggtggcagcagcagcagcga 220 ||||||||||||||||||||| Sbjct: 228 cggtggcagcagcagcagcga 248
>ref|NM_167464.1| Drosophila melanogaster CG32581-RA (CG32581), mRNA Length = 900 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 288 tgcggccacctattctgctggccgtgcct 316 |||||||| || ||||||||||||||||| Sbjct: 643 tgcggccatctgttctgctggccgtgcct 671
>ref|NM_167463.2| Drosophila melanogaster CG8974-RB, transcript variant B (CG8974), mRNA Length = 1416 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 288 tgcggccacctattctgctggccgtgcct 316 |||||||| || ||||||||||||||||| Sbjct: 618 tgcggccatctgttctgctggccgtgcct 646
>ref|NM_167462.2| Drosophila melanogaster CG8974-RA, transcript variant A (CG8974), mRNA Length = 1495 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 288 tgcggccacctattctgctggccgtgcct 316 |||||||| || ||||||||||||||||| Sbjct: 697 tgcggccatctgttctgctggccgtgcct 725
>ref|NM_206726.1| Drosophila melanogaster CG8974-RD, transcript variant D (CG8974), mRNA Length = 1303 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 288 tgcggccacctattctgctggccgtgcct 316 |||||||| || ||||||||||||||||| Sbjct: 505 tgcggccatctgttctgctggccgtgcct 533
>ref|NM_206725.1| Drosophila melanogaster CG8974-RE, transcript variant E (CG8974), mRNA Length = 1340 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 288 tgcggccacctattctgctggccgtgcct 316 |||||||| || ||||||||||||||||| Sbjct: 542 tgcggccatctgttctgctggccgtgcct 570
>gb|AC124544.4| Mus musculus BAC clone RP23-266K17 from 8, complete sequence Length = 150266 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 gcggcagtcggtggcagcagc 212 ||||||||||||||||||||| Sbjct: 74573 gcggcagtcggtggcagcagc 74553
>ref|NM_134551.4| Drosophila melanogaster CG32506-RA (CG32506), mRNA Length = 3723 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 797 gcagcagcagcagcaggcgga 817 ||||||||||||||||||||| Sbjct: 2445 gcagcagcagcagcaggcgga 2465
>ref|NM_132848.3| Drosophila melanogaster CG8974-RC, transcript variant C (CG8974), mRNA Length = 1761 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 288 tgcggccacctattctgctggccgtgcct 316 |||||||| || ||||||||||||||||| Sbjct: 963 tgcggccatctgttctgctggccgtgcct 991
>dbj|AK094037.1| Homo sapiens cDNA FLJ36718 fis, clone UTERU2010747, highly similar to Homo sapiens heparanase-like protein HPA2b mRNA Length = 2064 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 794 agggcagcagcagcagcaggc 814 ||||||||||||||||||||| Sbjct: 2006 agggcagcagcagcagcaggc 1986
>ref|NM_001039163.1| Rattus norvegicus tumor suppressor candidate 5 (Tusc5), mRNA dbj|AB218813.1| Rattus norvegicus mRNA for hypothetical protein, complete cds, brain endothelial cell derived gene-1 Length = 3410 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 796 ggcagcagcagcagcaggcgg 816 ||||||||||||||||||||| Sbjct: 236 ggcagcagcagcagcaggcgg 256
>dbj|AK134626.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330504J10 product:similar to Proteinase-related protein [Homo sapiens], full insert sequence Length = 1719 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 gcggcagtcggtggcagcagc 212 ||||||||||||||||||||| Sbjct: 380 gcggcagtcggtggcagcagc 360
>gb|BT000250.1| Arabidopsis thaliana phosphoglycerate kinase, putative (At1g56190) mRNA, complete cds Length = 1466 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 ttgttgaagaagacaagcttg 393 ||||||||||||||||||||| Sbjct: 941 ttgttgaagaagacaagcttg 961
>gb|AY062953.1| Arabidopsis thaliana putative phosphoglycerate kinase (At3g12780) mRNA, complete cds Length = 1477 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 ttgttgaagaagacaagcttg 393 ||||||||||||||||||||| Sbjct: 950 ttgttgaagaagacaagcttg 970
>gb|AY056291.1| Arabidopsis thaliana putative phosphoglycerate kinase (At1g56190) mRNA, complete cds Length = 1642 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 ttgttgaagaagacaagcttg 393 ||||||||||||||||||||| Sbjct: 979 ttgttgaagaagacaagcttg 999
>gb|AF360234.1| Arabidopsis thaliana putative phosphoglycerate kinase (At3g12780) mRNA, complete cds Length = 1641 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 ttgttgaagaagacaagcttg 393 ||||||||||||||||||||| Sbjct: 994 ttgttgaagaagacaagcttg 1014
>dbj|AK146733.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920047M16 product:Metalloproteinase (Fragment) homolog [Rattus norvegicus], full insert sequence Length = 1247 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 gcggcagtcggtggcagcagc 212 ||||||||||||||||||||| Sbjct: 480 gcggcagtcggtggcagcagc 460
>dbj|AK171156.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630228H03 product:weakly similar to Proteinase-related protein [Homo sapiens], full insert sequence Length = 1475 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 gcggcagtcggtggcagcagc 212 ||||||||||||||||||||| Sbjct: 567 gcggcagtcggtggcagcagc 547
>gb|AY126991.1| Arabidopsis thaliana AT3g12780/MBK21_14 mRNA, complete cds Length = 1638 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 ttgttgaagaagacaagcttg 393 ||||||||||||||||||||| Sbjct: 986 ttgttgaagaagacaagcttg 1006
>dbj|AK171401.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730203J23 product:weakly similar to Proteinase-related protein [Homo sapiens], full insert sequence Length = 1109 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 gcggcagtcggtggcagcagc 212 ||||||||||||||||||||| Sbjct: 472 gcggcagtcggtggcagcagc 452
>dbj|AK010254.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2400002F02 product:similar to OVARC1001176 PROTEIN [Homo sapiens], full insert sequence Length = 1240 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 gcggcagtcggtggcagcagc 212 ||||||||||||||||||||| Sbjct: 466 gcggcagtcggtggcagcagc 446
>gb|AY114638.1| Arabidopsis thaliana phosphoglycerate kinase (At3g12810) mRNA, complete cds Length = 1475 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 ttgttgaagaagacaagcttg 393 ||||||||||||||||||||| Sbjct: 950 ttgttgaagaagacaagcttg 970
>gb|AC009367.9| Drosophila melanogaster 3L BAC RP98-48B15 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 178239 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 797 gcagcagcagcagcaggcgga 817 ||||||||||||||||||||| Sbjct: 21128 gcagcagcagcagcaggcgga 21108
>gb|AC009378.7| Drosophila melanogaster 3L BAC RP98-9E8 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 180387 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 797 gcagcagcagcagcaggcgga 817 ||||||||||||||||||||| Sbjct: 131410 gcagcagcagcagcaggcgga 131390
>dbj|AK087254.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched library, clone:E030038O15 product:unclassifiable, full insert sequence Length = 2170 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 gcggcagtcggtggcagcagc 212 ||||||||||||||||||||| Sbjct: 228 gcggcagtcggtggcagcagc 248
>gb|AY099598.1| Arabidopsis thaliana phosphoglycerate kinase, putative (At1g56190) mRNA, complete cds Length = 1626 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 ttgttgaagaagacaagcttg 393 ||||||||||||||||||||| Sbjct: 979 ttgttgaagaagacaagcttg 999
>tpg|BK002218.1| TPA_inf: Drosophila melanogaster HDC10938 (HDC10938) gene, complete cds Length = 797 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 797 gcagcagcagcagcaggcgga 817 ||||||||||||||||||||| Sbjct: 54 gcagcagcagcagcaggcgga 34
>gb|AY093998.1| Arabidopsis thaliana AT3g12780/MBK21_14 mRNA, complete cds Length = 1446 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 ttgttgaagaagacaagcttg 393 ||||||||||||||||||||| Sbjct: 950 ttgttgaagaagacaagcttg 970
>ref|XM_807436.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053504055.60) partial mRNA Length = 654 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 797 gcagcagcagcagcaggcgga 817 ||||||||||||||||||||| Sbjct: 627 gcagcagcagcagcaggcgga 647
>gb|AC163765.3| Pan troglodytes BAC clone CH251-175G24 from chromosome unknown, complete sequence Length = 196942 Score = 42.1 bits (21), Expect = 4.5 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 551 catgggcgtgggtggc-gcaggggcgggg 578 |||||||||||||||| |||||||||||| Sbjct: 26370 catgggcgtgggtggcagcaggggcgggg 26398
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 200 cggtggcagcagcagcagcgatgcagccg 228 |||||||||| ||||||||||||| |||| Sbjct: 10783272 cggtggcagctgcagcagcgatgcggccg 10783244
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 797 gcagcagcagcagcaggcgga 817 ||||||||||||||||||||| Sbjct: 35802269 gcagcagcagcagcaggcgga 35802249
>emb|AL445439.9| Human DNA sequence from clone RP11-357P24 on chromosome 6 Contains the 5' end of the LAMA2 gene for laminin, alpha 2 (merosin, congenital muscular dystrophy) (LAMM) and a mesoderm specific transcript homolog (mouse) (MEST) (PEG1) pseudogene, complete sequence Length = 167025 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 947 tgaatttcagtttgtatgtat 967 ||||||||||||||||||||| Sbjct: 82175 tgaatttcagtttgtatgtat 82155
>emb|AL139243.11| Human DNA sequence from clone RP11-439D8 on chromosome 10 Contains a novel gene, the HPS1 gene for Hermansky-Pudlak syndrome 1, the 3' end of the HPSE2 gene for heparanase 2 and a CpG island, complete sequence Length = 143463 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 794 agggcagcagcagcagcaggc 814 ||||||||||||||||||||| Sbjct: 103965 agggcagcagcagcagcaggc 103985
>gb|AY060297.1| Drosophila melanogaster GH14055 full length cDNA Length = 1703 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 288 tgcggccacctattctgctggccgtgcct 316 |||||||| || ||||||||||||||||| Sbjct: 889 tgcggccatctgttctgctggccgtgcct 917
>gb|AY059841.1| Arabidopsis thaliana phosphoglycerate kinase (At3g12810; MBK21.17) mRNA, complete cds Length = 1551 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 ttgttgaagaagacaagcttg 393 ||||||||||||||||||||| Sbjct: 993 ttgttgaagaagacaagcttg 1013
>gb|AF428418.1|AF428418 Arabidopsis thaliana AT3g12780/MBK21_14 mRNA, complete cds Length = 1638 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 ttgttgaagaagacaagcttg 393 ||||||||||||||||||||| Sbjct: 986 ttgttgaagaagacaagcttg 1006
>gb|BT006285.1| Arabidopsis thaliana At4g27470 mRNA, complete cds Length = 732 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 282 actctctgcggccacctattctgctggcc 310 ||||||||||| ||||| ||||||||||| Sbjct: 169 actctctgcgggcaccttttctgctggcc 197
>gb|AY089047.1| Arabidopsis thaliana clone 21955 mRNA, complete sequence Length = 1641 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 ttgttgaagaagacaagcttg 393 ||||||||||||||||||||| Sbjct: 1012 ttgttgaagaagacaagcttg 1032
>gb|AY045623.1| Arabidopsis thaliana AT3g12780/MBK21_14 mRNA, complete cds Length = 1625 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 ttgttgaagaagacaagcttg 393 ||||||||||||||||||||| Sbjct: 1009 ttgttgaagaagacaagcttg 1029
>gb|AC092401.1|AC092401 Drosophila melanogaster, chromosome X, region 13E-13F, BAC clone BACR25C18, complete sequence Length = 185200 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 288 tgcggccacctattctgctggccgtgcct 316 |||||||| || ||||||||||||||||| Sbjct: 106182 tgcggccatctgttctgctggccgtgcct 106154 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 288 tgcggccacctattctgctggccgtgcct 316 |||||||| || ||||||||||||||||| Sbjct: 109352 tgcggccatctgttctgctggccgtgcct 109324
>gb|DQ059124.1| Arabidopsis thaliana RING finger family protein (At4g27470) mRNA, complete cds Length = 732 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 282 actctctgcggccacctattctgctggcc 310 ||||||||||| ||||| ||||||||||| Sbjct: 169 actctctgcgggcaccttttctgctggcc 197
>emb|BX284751.1|NCB24N11 Neurospora crassa DNA linkage group II BAC contig B24N11 Length = 129306 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 373 ttgttgaagaagacaagcttg 393 ||||||||||||||||||||| Sbjct: 98852 ttgttgaagaagacaagcttg 98832
>gb|AC011758.6|AC011758 Drosophila melanogaster, chromosome X, region 19C-19E, BAC clone BACR25I22, complete sequence Length = 164942 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 797 gcagcagcagcagcaggcgga 817 ||||||||||||||||||||| Sbjct: 42198 gcagcagcagcagcaggcgga 42218
>gb|AC013431.9|AC013431 Drosophila melanogaster, chromosome X, region 13E-13F, BAC clone BACR22H11, complete sequence Length = 191558 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 288 tgcggccacctattctgctggccgtgcct 316 |||||||| || ||||||||||||||||| Sbjct: 84912 tgcggccatctgttctgctggccgtgcct 84884 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 288 tgcggccacctattctgctggccgtgcct 316 |||||||| || ||||||||||||||||| Sbjct: 88082 tgcggccatctgttctgctggccgtgcct 88054
>gb|AC011071.12|AC011071 Drosophila melanogaster, chromosome X, region 18C-18D, BAC clone BACR27L16, complete sequence Length = 182623 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 gtggcagcagcagcagcgatg 222 ||||||||||||||||||||| Sbjct: 98806 gtggcagcagcagcagcgatg 98826
>emb|AL161571.2|ATCHRIV67 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 67 Length = 200001 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 282 actctctgcggccacctattctgctggcc 310 ||||||||||| ||||| ||||||||||| Sbjct: 46227 actctctgcgggcaccttttctgctggcc 46255
>emb|AL078467.1|ATF27G19 Arabidopsis thaliana DNA chromosome 4, BAC clone F27G19 (ESSA project) Length = 82381 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 282 actctctgcggccacctattctgctggcc 310 ||||||||||| ||||| ||||||||||| Sbjct: 59333 actctctgcgggcaccttttctgctggcc 59361
>gb|AC010847.11|AC010847 Drosophila melanogaster, chromosome X, region 18D-18D, BAC clone BACR10M08, complete sequence Length = 180213 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 gtggcagcagcagcagcgatg 222 ||||||||||||||||||||| Sbjct: 37286 gtggcagcagcagcagcgatg 37306
>gb|AC069159.8|AC069159 Arabidopsis thaliana chromosome 1 BAC F14G9 genomic sequence, complete sequence Length = 111481 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 373 ttgttgaagaagacaagcttg 393 ||||||||||||||||||||| Sbjct: 78463 ttgttgaagaagacaagcttg 78443
>dbj|AP006619.1| Nocardia farcinica IFM 10152 plasmid pNF1 DNA, complete sequence Length = 184026 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 ccgcccgctggtcggcctccg 121 ||||||||||||||||||||| Sbjct: 118217 ccgcccgctggtcggcctccg 118237
>dbj|AP004082.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1149_C12 Length = 120743 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 797 gcagcagcagcagcaggcgga 817 ||||||||||||||||||||| Sbjct: 72984 gcagcagcagcagcaggcgga 72964
>dbj|AB024033.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MBK21 Length = 79125 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 373 ttgttgaagaagacaagcttg 393 ||||||||||||||||||||| Sbjct: 46843 ttgttgaagaagacaagcttg 46823
>gb|BT002429.1| Arabidopsis thaliana putative RING zinc finger protein (At4g27470) mRNA, complete cds Length = 1087 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 282 actctctgcggccacctattctgctggcc 310 ||||||||||| ||||| ||||||||||| Sbjct: 328 actctctgcgggcaccttttctgctggcc 356
>gb|AF210249.1|AF210249 Streptomyces verticillus bleomycin biosynthetic gene cluster, complete cds Length = 77457 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 ccgttcgccgcccgccgcccg 107 ||||||||||||||||||||| Sbjct: 23902 ccgttcgccgcccgccgcccg 23882
>ref|XM_958417.1| Neurospora crassa OR74A hypothetical protein (NCU06738.1) partial mRNA Length = 3771 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 373 ttgttgaagaagacaagcttg 393 ||||||||||||||||||||| Sbjct: 1160 ttgttgaagaagacaagcttg 1140
>gb|AF123456.2|AF123456 Gallus gallus doublesex and mab-3 related transcription factor 1 (DMRT1) mRNA, partial cds Length = 1510 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 cggtggcagcagcagcagcga 220 ||||||||||||||||||||| Sbjct: 320 cggtggcagcagcagcagcga 340
>gb|AY530952.1| Zea mays unknown (Z576C20.2), putative heme oxygenase 1 (Z576C20.3), anthocyanin biosynthesis regulatory protein Pl1_B73 (Z576C20.4), putative growth-regulating factor 1 (Z576C20.6), and putative aminoalcoholphosphotransferase (Z576C20.14) genes, complete cds; and putative receptor protein kinase (Z576C20.21) gene, partial cds Length = 155173 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 797 gcagcagcagcagcaggcgga 817 ||||||||||||||||||||| Sbjct: 109975 gcagcagcagcagcaggcgga 109995
>emb|BX814905.1|CNS0ADX0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS18ZA10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1702 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 ttgttgaagaagacaagcttg 393 ||||||||||||||||||||| Sbjct: 1061 ttgttgaagaagacaagcttg 1081
>emb|BX823216.1|CNS0A6JY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS11ZF05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1552 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 ttgttgaagaagacaagcttg 393 ||||||||||||||||||||| Sbjct: 950 ttgttgaagaagacaagcttg 970
>gb|AF247558.1|AF247558 Arabidopsis thaliana phosphoglycerate kinase (PGK1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1616 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 ttgttgaagaagacaagcttg 393 ||||||||||||||||||||| Sbjct: 977 ttgttgaagaagacaagcttg 997
>gb|AF211349.1|AF211349 Gallus gallus doublesex and mab-3 related transcription factor 1 (Dmrt1) mRNA, partial cds Length = 936 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 cggtggcagcagcagcagcga 220 ||||||||||||||||||||| Sbjct: 320 cggtggcagcagcagcagcga 340
>emb|AJ299719.1|HSA299719 Homo sapiens mRNA for heparanase 2 Length = 2353 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 794 agggcagcagcagcagcaggc 814 ||||||||||||||||||||| Sbjct: 2235 agggcagcagcagcagcaggc 2215
>gb|AC169088.2| Gallus gallus BAC clone CH261-100B3 from chromosome ul, complete sequence Length = 214859 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 tcgccgcccgccgcccgctgg 111 ||||||||||||||||||||| Sbjct: 174219 tcgccgcccgccgcccgctgg 174239
>gb|U37701.1|ATU37701 Arabidopsis thaliana phosphoglycerate kinase mRNA, partial cds Length = 1354 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 ttgttgaagaagacaagcttg 393 ||||||||||||||||||||| Sbjct: 704 ttgttgaagaagacaagcttg 724
>gb|U37700.1|ATU37700 Arabidopsis thaliana phosphoglycerate kinase mRNA, partial cds Length = 841 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 ttgttgaagaagacaagcttg 393 ||||||||||||||||||||| Sbjct: 201 ttgttgaagaagacaagcttg 221
>gb|AY610096.1| Sus scrofa clone Clu_6918.scr.msk.p1.Contig5, mRNA sequence Length = 2592 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 795 gggcagcagcagcagcaggcg 815 ||||||||||||||||||||| Sbjct: 159 gggcagcagcagcagcaggcg 179
>gb|AC133195.4| Mus musculus BAC clone RP23-133F6 from 8, complete sequence Length = 214318 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 gcggcagtcggtggcagcagc 212 ||||||||||||||||||||| Sbjct: 17052 gcggcagtcggtggcagcagc 17032
>emb|AL627314.6| Mouse DNA sequence from clone RP23-354H24 on chromosome 4, complete sequence Length = 196461 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 796 ggcagcagcagcagcaggcgg 816 ||||||||||||||||||||| Sbjct: 121696 ggcagcagcagcagcaggcgg 121716 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 190,513,827 Number of extensions: 11169850 Number of successful extensions: 660583 Number of sequences better than 10.0: 152 Number of HSP's gapped: 660563 Number of HSP's successfully gapped: 194 Length of query: 1197 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1174 Effective length of database: 18,503,978,556 Effective search space: 21723670824744 Effective search space used: 21723670824744 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)