ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf160o08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os08g0484200:Os08g0484200 | 30 | 0.54 | 2 | AK058504:Os12g0121100 | 29 | 0.92 | 3 | Os08g0135600:Os08g0135600 | 28 | 1.6 | 4 | AK102267:Os11g0121400 | 28 | 2.0 | 5 | AK066754:Os06g0610800 | 28 | 2.0 | 6 | AK062719:Os06g0610800 | 28 | 2.0 | 7 | AB071664:Os03g0727200 | 27 | 3.5 | 8 | AB071663:Os03g0727200 | 27 | 3.5 | 9 | AB028882:Os03g0727200 | 27 | 3.5 | 10 | AK065719:Os06g0619000 | 27 | 4.4 | 11 | AK068654:Os11g0303800 | 27 | 4.5 | 12 | AY224472:Os03g0130700 | 27 | 5.8 | 13 | Os02g0627700:Os02g0627700 | 27 | 5.9 | 14 | AK067247:Os06g0186400 | 27 | 5.9 | 15 | AK066243:Os06g0186400 | 27 | 5.9 | 16 | Os09g0122000:Os09g0122000 | 26 | 7.8 | 17 | Os04g0455700:Os04g0455700 | 26 | 7.8 | 18 | Z67962:Os01g0833700 | 26 | 7.8 | 19 | AK069745:Os01g0833700 | 26 | 7.8 | 20 | AK072655:Os04g0510400 | 26 | 9.9 |
|---|
>Os08g0484200:Os08g0484200 | Length = 413 Score = 30.0 bits (66), Expect = 0.54 Identities = 20/60 (33%), Positives = 27/60 (45%) Frame = -2 Query: 231 CAGGPLEQYATAGSQGGFGGSLVYGFMLLKARLAEARPLAASTACAANAIEASITQSNKA 52 CAGGPL G GG GG + GF AR R L + A + + +++KA Sbjct: 79 CAGGPLGGPGGYGVGGGGGGRVGGGFTFAAARSRRVRGLDPAVLGAFPTMAYADVKAHKA 138
>AK058504:Os12g0121100 | Length = 375 Score = 29.3 bits (64), Expect = 0.92 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +2 Query: 134 NRALSSMNPYTREPPNPPCDPAVAYC 211 NR L++ + + R PNP C PAV C Sbjct: 347 NRRLTTNSVHCRAIPNPKCSPAVPAC 372
>Os08g0135600:Os08g0135600 | Length = 523 Score = 28.5 bits (62), Expect = 1.6 Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 2/69 (2%) Frame = -1 Query: 220 PARTVRNSWVTRWIWRFPRVRIHAA*STVGRSEASGGEHGLRGERDRGQHHAKQQGQILE 41 P+ +R +WV RW + + + + GR G G R G + G++ Sbjct: 228 PSPPIRAAWVGRWRCSWSSLMVGGGEARHGRVRQGGKSRGRRVRLMVGGGGEARHGRVRR 287 Query: 40 G--SHC*RK 20 G SHC R+ Sbjct: 288 GGKSHCRRR 296
>AK102267:Os11g0121400 | Length = 413 Score = 28.1 bits (61), Expect = 2.0 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +2 Query: 134 NRALSSMNPYTREPPNPPCDPAVAYC 211 NR L + + R PNP C PAV C Sbjct: 385 NRRLMTNRVHCRALPNPKCSPAVPAC 410
>AK066754:Os06g0610800 | Length = 519 Score = 28.1 bits (61), Expect = 2.0 Identities = 19/42 (45%), Positives = 23/42 (54%) Frame = -2 Query: 198 AGSQGGFGGSLVYGFMLLKARLAEARPLAASTACAANAIEAS 73 AG GG GG GF+L + LA A LAA C A A +A+ Sbjct: 9 AGHGGGGGGG---GFLLRRRLLATAAFLAAFGLCTAAADDAA 47
>AK062719:Os06g0610800 | Length = 183 Score = 28.1 bits (61), Expect = 2.0 Identities = 19/42 (45%), Positives = 23/42 (54%) Frame = -2 Query: 198 AGSQGGFGGSLVYGFMLLKARLAEARPLAASTACAANAIEAS 73 AG GG GG GF+L + LA A LAA C A A +A+ Sbjct: 9 AGHGGGGGGG---GFLLRRRLLATAAFLAAFGLCTAAADDAA 47
>AB071664:Os03g0727200 | Length = 365 Score = 27.3 bits (59), Expect = 3.5 Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 13/103 (12%) Frame = -2 Query: 285 ITLLILTVSSAQ*LLGS*CAGGPLEQYATAGSQGGFGGSLVYGFM--LLKARLAE----A 124 +++ + TV S+ + AGG + A A GG GG G + +KAR+ Sbjct: 25 VSVQVYTVPSSSTAASAAAAGGARQAVAPATRDGGDGGGRAAGVLDDPVKARIVSHPRYH 84 Query: 123 RPLAA-----STACAANAIE--ASITQSNKARFLRGAIAKGRM 16 R LAA C A A E A+ + +AR R A A RM Sbjct: 85 RLLAAFLDCHKVGCPAEAAEEIAAAARVREAR-QRAAAAASRM 126
>AB071663:Os03g0727200 | Length = 365 Score = 27.3 bits (59), Expect = 3.5 Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 13/103 (12%) Frame = -2 Query: 285 ITLLILTVSSAQ*LLGS*CAGGPLEQYATAGSQGGFGGSLVYGFM--LLKARLAE----A 124 +++ + TV S+ + AGG + A A GG GG G + +KAR+ Sbjct: 25 VSVQVYTVPSSSTAASAAAAGGARQAVAPATRDGGDGGGRAAGVLDDPVKARIVSHPRYH 84 Query: 123 RPLAA-----STACAANAIE--ASITQSNKARFLRGAIAKGRM 16 R LAA C A A E A+ + +AR R A A RM Sbjct: 85 RLLAAFLDCHKVGCPAEAAEEIAAAARVREAR-QRAAAAASRM 126
>AB028882:Os03g0727200 | Length = 365 Score = 27.3 bits (59), Expect = 3.5 Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 13/103 (12%) Frame = -2 Query: 285 ITLLILTVSSAQ*LLGS*CAGGPLEQYATAGSQGGFGGSLVYGFM--LLKARLAE----A 124 +++ + TV S+ + AGG + A A GG GG G + +KAR+ Sbjct: 25 VSVQVYTVPSSSTAASAAAAGGARQAVAPATRDGGDGGGRAAGVLDDPVKARIVSHPRYH 84 Query: 123 RPLAA-----STACAANAIE--ASITQSNKARFLRGAIAKGRM 16 R LAA C A A E A+ + +AR R A A RM Sbjct: 85 RLLAAFLDCHKVGCPAEAAEEIAAAARVREAR-QRAAAAASRM 126
>AK065719:Os06g0619000 | Length = 1171 Score = 26.9 bits (58), Expect = 4.4 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%) Frame = -3 Query: 302 TMDNLTSLCLY*R*AVLSSFSEANVRVAR---SNSTQQLGHKVDLAVPSCTD 156 T D+L S CL+ +S+ V S +T QL H +L V SCTD Sbjct: 903 TSDSLPSSCLFDSLMASASYLILLVNCCSFLSSLNTDQLSHVEELNVKSCTD 954
>AK068654:Os11g0303800 | Length = 434 Score = 26.9 bits (58), Expect = 4.5 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +2 Query: 155 NPYTREPPNPPCDPAVAYCSSGP 223 +P T +PP P PAVA SS P Sbjct: 55 SPATVQPPTPSSSPAVAAPSSSP 77
>AY224472:Os03g0130700 | Length = 1413 Score = 26.6 bits (57), Expect = 5.8 Identities = 10/27 (37%), Positives = 18/27 (66%) Frame = +3 Query: 162 TRGNRQIHLVTQLLRTVRAGHPHISFR 242 ++G + LVT++ T+R HPH++ R Sbjct: 154 SQGVGKTTLVTRVFETLRESHPHLNIR 180
>Os02g0627700:Os02g0627700 | Length = 686 Score = 26.6 bits (57), Expect = 5.9 Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 10/70 (14%) Frame = -2 Query: 222 GPLEQYATAGSQGGFGGSLVYGF----------MLLKARLAEARPLAASTACAANAIEAS 73 G L+ Y T G + GF S G L R A + PL+ T A + +EA Sbjct: 529 GYLDSYTTQGGRSGFFNSCRIGAGEFCGEELLPWALDPRPAASLPLSTRTVRAVSEVEAF 588 Query: 72 ITQSNKARFL 43 ++ RF+ Sbjct: 589 ALVADDLRFV 598
>AK067247:Os06g0186400 | Length = 484 Score = 26.6 bits (57), Expect = 5.9 Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 2/80 (2%) Frame = -1 Query: 265 GEQCSVASRKLMCGWPARTVRNS--WVTRWIWRFPRVRIHAA*STVGRSEASGGEHGLRG 92 G S AS ++ ART +S ++T+WI RFP+ + G E + G Sbjct: 150 GYSYSNASDDILNNGDARTANDSLTFLTKWIERFPQYK--------------GREFYVTG 195 Query: 91 ERDRGQHHAKQQGQILEGSH 32 E G H+ Q Q ++ H Sbjct: 196 ESYAG-HYVPQLAQAIKRHH 214
>AK066243:Os06g0186400 | Length = 484 Score = 26.6 bits (57), Expect = 5.9 Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 2/80 (2%) Frame = -1 Query: 265 GEQCSVASRKLMCGWPARTVRNS--WVTRWIWRFPRVRIHAA*STVGRSEASGGEHGLRG 92 G S AS ++ ART +S ++T+WI RFP+ + G E + G Sbjct: 150 GYSYSNASDDILNNGDARTANDSLTFLTKWIERFPQYK--------------GREFYVTG 195 Query: 91 ERDRGQHHAKQQGQILEGSH 32 E G H+ Q Q ++ H Sbjct: 196 ESYAG-HYVPQLAQAIKRHH 214
>Os09g0122000:Os09g0122000 | Length = 666 Score = 26.2 bits (56), Expect = 7.8 Identities = 16/66 (24%), Positives = 26/66 (39%) Frame = -1 Query: 301 RWIISHHFAYIDGEQCSVASRKLMCGWPARTVRNSWVTRWIWRFPRVRIHAA*STVGRSE 122 RW + ++DG +SR+ + + + WIWR + H GR E Sbjct: 63 RWGVEDGHGHVDG-----SSRQHPSELGFSSALSVPIGGWIWRLAAAQAHGEVIDGGRCE 117 Query: 121 ASGGEH 104 G+H Sbjct: 118 DEAGDH 123
>Os04g0455700:Os04g0455700 | Length = 225 Score = 26.2 bits (56), Expect = 7.8 Identities = 9/24 (37%), Positives = 14/24 (58%) Frame = -1 Query: 292 ISHHFAYIDGEQCSVASRKLMCGW 221 ++HH+ DGE+C+ CGW Sbjct: 192 VNHHYCCSDGERCA------QCGW 209
>Z67962:Os01g0833700 | Length = 518 Score = 26.2 bits (56), Expect = 7.8 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 3/62 (4%) Frame = -2 Query: 186 GGFGGSLVYGFMLLKARLAEARPLAASTACAANAIEASITQSNKAR---FLRGAIAKGRM 16 GG GG ++G M A+ RP A + A A+ + + S + FL A+G + Sbjct: 198 GGPGGDPIFGDMDSFTHKAKGRPSAPAPASASTKVPGGMKLSKAQKTNQFLESLKAEGEV 257 Query: 15 LV 10 ++ Sbjct: 258 IL 259
>AK069745:Os01g0833700 | Length = 518 Score = 26.2 bits (56), Expect = 7.8 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 3/62 (4%) Frame = -2 Query: 186 GGFGGSLVYGFMLLKARLAEARPLAASTACAANAIEASITQSNKAR---FLRGAIAKGRM 16 GG GG ++G M A+ RP A + A A+ + + S + FL A+G + Sbjct: 198 GGPGGDPIFGDMDSFTHKAKGRPSAPAPASASTKVPGGMKLSKAQKTNQFLESLKAEGEV 257 Query: 15 LV 10 ++ Sbjct: 258 IL 259
>AK072655:Os04g0510400 | Length = 832 Score = 25.8 bits (55), Expect = 9.9 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = -3 Query: 353 VVNTLGALWRLFEKGNRTMDNLTSLCLY 270 VV T G LW L GN+ + L SL + Sbjct: 341 VVGTPGRLWELMSTGNQHLIKLHSLSFF 368 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 11,221,053 Number of extensions: 243774 Number of successful extensions: 1125 Number of sequences better than 10.0: 20 Number of HSP's gapped: 1122 Number of HSP's successfully gapped: 20 Length of query: 135 Length of database: 15,399,855 Length adjustment: 90 Effective length of query: 45 Effective length of database: 11,796,165 Effective search space: 530827425 Effective search space used: 530827425 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
