| Clone Name | FLbaf156k03 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os04g0564500:Os04g0564500 | 183 | 9e-62 | 2 | AK071737:Os09g0323500 | 117 | 2e-26 | 3 | AK122100:Os03g0749300 | 31 | 1.6 | 4 | AK119203:Os03g0749300 | 31 | 1.6 | 5 | AK065044:Os03g0749300 | 31 | 1.6 | 6 | Os12g0524600:Os12g0524600 | 30 | 2.1 | 7 | Os09g0401600:Os09g0401600 | 30 | 2.7 | 8 | AK066451:Os12g0597600 | 30 | 2.7 | 9 | Os01g0170300:Os01g0170300 | 28 | 3.3 | 10 | AK110454: | 30 | 3.6 | 11 | AK109579:Os07g0606800 | 29 | 6.1 | 12 | Os12g0450200:Os12g0450200 | 28 | 8.0 | 13 | AK110092: | 28 | 8.0 |
|---|
>Os04g0564500:Os04g0564500 | Length = 314 Score = 183 bits (464), Expect(2) = 9e-62 Identities = 90/117 (76%), Positives = 102/117 (87%) Frame = +1 Query: 544 QVLRLGQNFNSFLAAHDDAEVSLKQMVEELMTDTVKADRSAVPDTGVDPDWEYQLSSIFI 723 ++LRLGQ+FN FLA D AEVSL+QMVEELM D VKAD+SAVPDTGVDPDWEYQLSSIFI Sbjct: 190 KMLRLGQSFNRFLATQDGAEVSLQQMVEELMMDPVKADKSAVPDTGVDPDWEYQLSSIFI 249 Query: 724 DTEKGQARYGTRSMAAIGVKLDGEVTFYERSLASSLWNENLVQFRMEMAQ*QALRGT 894 DTEKGQARYGTRSM A+ VK +GEVTFYER L S+LW ENL+QF +EM+Q + LRGT Sbjct: 250 DTEKGQARYGTRSMTALAVKFNGEVTFYERYLESNLWKENLMQFELEMSQWEDLRGT 306 Score = 72.8 bits (177), Expect(2) = 9e-62 Identities = 40/60 (66%), Positives = 42/60 (70%), Gaps = 4/60 (6%) Frame = +3 Query: 378 PGSRRGPE--GSFP*GF--SRQGPLEYATEIAKEADQYNGFNLVLADVHSGTMVYISNKP 545 PG+ GP G P F Q PLEYA EIAKEADQYNGFNLVLADV SG M YISN+P Sbjct: 104 PGTLVGPNVRGELPVRFLQGNQCPLEYAEEIAKEADQYNGFNLVLADVQSGNMAYISNRP 163 Score = 69.3 bits (168), Expect = 4e-12 Identities = 46/122 (37%), Positives = 49/122 (40%), Gaps = 28/122 (22%) Frame = +2 Query: 146 MCIAAWTWQAHPAYGLLLLFNRDEYH----------------------------SRPTRP 241 MCIAAW WQ+ PA+ LLLLFNRDEYH SRPT+P Sbjct: 1 MCIAAWAWQSQPAHRLLLLFNRDEYHSRCAPCSVPSIPTPYNSHLLTRARRDFLSRPTQP 60 Query: 242 AQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFLTNVREASPRVEARSRGELPVRF 421 A AFLTNVRE V RGELPVRF Sbjct: 61 AGWWAAGKAEVKLILGGRDELGGGTWLGCTRDGKLAFLTNVREPGTLVGPNVRGELPVRF 120 Query: 422 LQ 427 LQ Sbjct: 121 LQ 122
>AK071737:Os09g0323500 | Length = 266 Score = 117 bits (292), Expect = 2e-26 Identities = 54/118 (45%), Positives = 75/118 (63%) Frame = +1 Query: 511 IQEPWCTSLINQVLRLGQNFNSFLAAHDDAEVSLKQMVEELMTDTVKADRSAVPDTGVDP 690 + PW + +RLG+NF L H D EV K +VE LMTDT KAD+ +P+TG DP Sbjct: 154 LDSPW-----QKAIRLGKNFREHLRKHGDDEVEAKDIVERLMTDTTKADKDRLPNTGCDP 208 Query: 691 DWEYQLSSIFIDTEKGQARYGTRSMAAIGVKLDGEVTFYERSLASSLWNENLVQFRME 864 +WE+ LSSIFI+ + Q YGTRS A + V DGE + YE+ L S +W ++ V +++E Sbjct: 209 NWEHGLSSIFIEVQTDQGLYGTRSTAVLSVNYDGEASLYEKYLESGIWKDHTVHYQIE 266 Score = 73.2 bits (178), Expect = 3e-13 Identities = 41/95 (43%), Positives = 48/95 (50%) Frame = +2 Query: 146 MCIAAWTWQAHPAYGLLLLFNRDEYHSRPTRPAQXXXXXXXXXXXXXXXXXXXXXXXXXX 325 MCIAAW WQAHP + LLLL NRDE+HSRPT+ Sbjct: 1 MCIAAWVWQAHPQHQLLLLLNRDEFHSRPTKAV---GWWGEGSKKILGGRDVLGGGTWMG 57 Query: 326 XXXXXXXAFLTNVREASPRVEARSRGELPVRFLQA 430 AFLTNV E AR+RG+LP+RFLQ+ Sbjct: 58 CTKDGRLAFLTNVLEPDAMPGARTRGDLPLRFLQS 92 Score = 65.9 bits (159), Expect = 5e-11 Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 2/58 (3%) Frame = +3 Query: 378 PGSRRGPEGSFP*GF--SRQGPLEYATEIAKEADQYNGFNLVLADVHSGTMVYISNKP 545 PG+R G P F S + PLE ATE+AKEAD+YNGFNLVLAD+ + MVY+SN+P Sbjct: 77 PGART--RGDLPLRFLQSNKSPLEVATEVAKEADEYNGFNLVLADLTTNVMVYVSNRP 132
>AK122100:Os03g0749300 | Length = 625 Score = 30.8 bits (68), Expect = 1.6 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = -2 Query: 710 LNWYSQSGSTPVSGTADLSALTVSVISSSTICFKETSASS 591 + W Q G+ +GT LSA+ +V S+T+ + E SS Sbjct: 452 ITWQGQPGNNITAGTTILSAIKATVDPSTTVVYSENPDSS 491
>AK119203:Os03g0749300 | Length = 475 Score = 30.8 bits (68), Expect = 1.6 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = -2 Query: 710 LNWYSQSGSTPVSGTADLSALTVSVISSSTICFKETSASS 591 + W Q G+ +GT LSA+ +V S+T+ + E SS Sbjct: 302 ITWQGQPGNNITAGTTILSAIKATVDPSTTVVYSENPDSS 341
>AK065044:Os03g0749300 | Length = 625 Score = 30.8 bits (68), Expect = 1.6 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = -2 Query: 710 LNWYSQSGSTPVSGTADLSALTVSVISSSTICFKETSASS 591 + W Q G+ +GT LSA+ +V S+T+ + E SS Sbjct: 452 ITWQGQPGNNITAGTTILSAIKATVDPSTTVVYSENPDSS 491
>Os12g0524600:Os12g0524600 | Length = 1425 Score = 30.4 bits (67), Expect = 2.1 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 11/75 (14%) Frame = -2 Query: 932 SVSLCRHTHHPIYVPRKACYCAISIRNCT-RFSFHKL----------LAKDLS*KVTSPS 786 SVS RH P++ PR++C A CT R H L + S + PS Sbjct: 719 SVSPERHRREPLHPPRRSCSAARPSPPCTGRPHLHHLRHRSGKVVLGIVSPPSKSLRGPS 778 Query: 785 SFTPMAAMLRVPYLA 741 S +P+ ++ VP +A Sbjct: 779 SSSPIVLVVDVPSVA 793
>Os09g0401600:Os09g0401600 | Length = 433 Score = 30.0 bits (66), Expect = 2.7 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +3 Query: 78 STHVFRQSPDPFAFSTGPSPRRPCASRR 161 + HV PDP + + P+P RP A RR Sbjct: 29 TAHVLGSGPDPSSRPSNPTPSRPAAPRR 56
>AK066451:Os12g0597600 | Length = 367 Score = 30.0 bits (66), Expect = 2.7 Identities = 20/59 (33%), Positives = 26/59 (44%) Frame = +3 Query: 357 PTSGRPAPGSRRGPEGSFP*GFSRQGPLEYATEIAKEADQYNGFNLVLADVHSGTMVYI 533 PT PA G++ P GS S Q PL YA + A G ++ HSG + I Sbjct: 221 PTGAPPASGNQHPPHGSSQITHSMQVPLSYADAVIGAA----GASISYIRRHSGATISI 275
>Os01g0170300:Os01g0170300 | Length = 1117 Score = 27.7 bits (60), Expect(2) = 3.3 Identities = 15/56 (26%), Positives = 22/56 (39%) Frame = -1 Query: 906 PPNICSSQGLLLCHLHSKLY*ILIPQAAGQGPLVESYLTIQFHPDGGHAPCPVSCL 739 PP I + L LH ++P QG YL + ++ GG P + L Sbjct: 507 PPEIAGCRNLTFVDLHGNAIAGVLPPGLFQGTPSLQYLDLSYNAIGGAIPANIGML 562 Score = 20.4 bits (41), Expect(2) = 3.3 Identities = 6/18 (33%), Positives = 11/18 (61%) Frame = -2 Query: 965 STGTIQSCLPPSVSLCRH 912 ST + +PP ++ CR+ Sbjct: 498 STNRLSGAIPPEIAGCRN 515
>AK110454: | Length = 1074 Score = 29.6 bits (65), Expect = 3.6 Identities = 14/40 (35%), Positives = 19/40 (47%) Frame = +3 Query: 15 PPSAVLVVLYPTTGPAVTEPASTHVFRQSPDPFAFSTGPS 134 PPSAV + L+P+ GP+ A+ P P G S Sbjct: 970 PPSAVGIALFPSEGPSTPAEAARRERETRPGPRPLQAGES 1009
>AK109579:Os07g0606800 | Length = 367 Score = 28.9 bits (63), Expect = 6.1 Identities = 19/54 (35%), Positives = 23/54 (42%) Frame = +2 Query: 2 PSRLSTVGRPRRALPNDGPRGHRAREHARVPTISRSLRLLHRTEPPTAMCIAAW 163 P R+S + R LP R H A A VP R R PPT +C+ W Sbjct: 225 PERISWLWRA--FLPPGATRDHEA---ANVPAALRRDAERRRAFPPTMVCVGGW 273
>Os12g0450200:Os12g0450200 | Length = 3154 Score = 28.5 bits (62), Expect = 8.0 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = +3 Query: 42 YPTTGPAVTEPASTHVFRQSPDPFAFSTGPSPRRPCASRRG 164 + TTG A T P + R + P AF+ SPR+P ++ G Sbjct: 2462 HSTTGLASTGPCADFPDRSASSPAAFTRPASPRQPPSAGPG 2502
>AK110092: | Length = 981 Score = 28.5 bits (62), Expect = 8.0 Identities = 23/62 (37%), Positives = 29/62 (46%) Frame = -2 Query: 767 AMLRVPYLACPFSVSMNIELNWYSQSGSTPVSGTADLSALTVSVISSSTICFKETSASSC 588 AML V A P + W +S TP+ A L AL SS ++CF T A+S Sbjct: 600 AMLPVADQAWPLR-----SVEWVLES-DTPIPPNAALPALDTIPPSSLSLCFTSTPAASG 653 Query: 587 AA 582 AA Sbjct: 654 AA 655 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 30,701,820 Number of extensions: 746513 Number of successful extensions: 2580 Number of sequences better than 10.0: 13 Number of HSP's gapped: 2575 Number of HSP's successfully gapped: 18 Length of query: 340 Length of database: 15,399,855 Length adjustment: 101 Effective length of query: 239 Effective length of database: 11,355,714 Effective search space: 2714015646 Effective search space used: 2714015646 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)