ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf156k03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os04g0564500:Os04g0564500 183 9e-62
2AK071737:Os09g0323500 117 2e-26
3AK122100:Os03g0749300 31 1.6
4AK119203:Os03g0749300 31 1.6
5AK065044:Os03g0749300 31 1.6
6Os12g0524600:Os12g0524600 30 2.1
7Os09g0401600:Os09g0401600 30 2.7
8AK066451:Os12g0597600 30 2.7
9Os01g0170300:Os01g0170300 28 3.3
10AK110454: 30 3.6
11AK109579:Os07g0606800 29 6.1
12Os12g0450200:Os12g0450200 28 8.0
13AK110092: 28 8.0

>Os04g0564500:Os04g0564500 |
          Length = 314
 Score =  183 bits (464), Expect(2) = 9e-62
 Identities = 90/117 (76%), Positives = 102/117 (87%)
 Frame = +1

Query: 544 QVLRLGQNFNSFLAAHDDAEVSLKQMVEELMTDTVKADRSAVPDTGVDPDWEYQLSSIFI 723
           ++LRLGQ+FN FLA  D AEVSL+QMVEELM D VKAD+SAVPDTGVDPDWEYQLSSIFI
Sbjct: 190 KMLRLGQSFNRFLATQDGAEVSLQQMVEELMMDPVKADKSAVPDTGVDPDWEYQLSSIFI 249

Query: 724 DTEKGQARYGTRSMAAIGVKLDGEVTFYERSLASSLWNENLVQFRMEMAQ*QALRGT 894
           DTEKGQARYGTRSM A+ VK +GEVTFYER L S+LW ENL+QF +EM+Q + LRGT
Sbjct: 250 DTEKGQARYGTRSMTALAVKFNGEVTFYERYLESNLWKENLMQFELEMSQWEDLRGT 306



 Score = 72.8 bits (177), Expect(2) = 9e-62
 Identities = 40/60 (66%), Positives = 42/60 (70%), Gaps = 4/60 (6%)
 Frame = +3

Query: 378 PGSRRGPE--GSFP*GF--SRQGPLEYATEIAKEADQYNGFNLVLADVHSGTMVYISNKP 545
           PG+  GP   G  P  F    Q PLEYA EIAKEADQYNGFNLVLADV SG M YISN+P
Sbjct: 104 PGTLVGPNVRGELPVRFLQGNQCPLEYAEEIAKEADQYNGFNLVLADVQSGNMAYISNRP 163



 Score = 69.3 bits (168), Expect = 4e-12
 Identities = 46/122 (37%), Positives = 49/122 (40%), Gaps = 28/122 (22%)
 Frame = +2

Query: 146 MCIAAWTWQAHPAYGLLLLFNRDEYH----------------------------SRPTRP 241
           MCIAAW WQ+ PA+ LLLLFNRDEYH                            SRPT+P
Sbjct: 1   MCIAAWAWQSQPAHRLLLLFNRDEYHSRCAPCSVPSIPTPYNSHLLTRARRDFLSRPTQP 60

Query: 242 AQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFLTNVREASPRVEARSRGELPVRF 421
           A                                  AFLTNVRE    V    RGELPVRF
Sbjct: 61  AGWWAAGKAEVKLILGGRDELGGGTWLGCTRDGKLAFLTNVREPGTLVGPNVRGELPVRF 120

Query: 422 LQ 427
           LQ
Sbjct: 121 LQ 122



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>AK071737:Os09g0323500 |
          Length = 266

 Score =  117 bits (292), Expect = 2e-26
 Identities = 54/118 (45%), Positives = 75/118 (63%)
 Frame = +1

Query: 511 IQEPWCTSLINQVLRLGQNFNSFLAAHDDAEVSLKQMVEELMTDTVKADRSAVPDTGVDP 690
           +  PW      + +RLG+NF   L  H D EV  K +VE LMTDT KAD+  +P+TG DP
Sbjct: 154 LDSPW-----QKAIRLGKNFREHLRKHGDDEVEAKDIVERLMTDTTKADKDRLPNTGCDP 208

Query: 691 DWEYQLSSIFIDTEKGQARYGTRSMAAIGVKLDGEVTFYERSLASSLWNENLVQFRME 864
           +WE+ LSSIFI+ +  Q  YGTRS A + V  DGE + YE+ L S +W ++ V +++E
Sbjct: 209 NWEHGLSSIFIEVQTDQGLYGTRSTAVLSVNYDGEASLYEKYLESGIWKDHTVHYQIE 266



 Score = 73.2 bits (178), Expect = 3e-13
 Identities = 41/95 (43%), Positives = 48/95 (50%)
 Frame = +2

Query: 146 MCIAAWTWQAHPAYGLLLLFNRDEYHSRPTRPAQXXXXXXXXXXXXXXXXXXXXXXXXXX 325
           MCIAAW WQAHP + LLLL NRDE+HSRPT+                             
Sbjct: 1   MCIAAWVWQAHPQHQLLLLLNRDEFHSRPTKAV---GWWGEGSKKILGGRDVLGGGTWMG 57

Query: 326 XXXXXXXAFLTNVREASPRVEARSRGELPVRFLQA 430
                  AFLTNV E      AR+RG+LP+RFLQ+
Sbjct: 58  CTKDGRLAFLTNVLEPDAMPGARTRGDLPLRFLQS 92



 Score = 65.9 bits (159), Expect = 5e-11
 Identities = 34/58 (58%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
 Frame = +3

Query: 378 PGSRRGPEGSFP*GF--SRQGPLEYATEIAKEADQYNGFNLVLADVHSGTMVYISNKP 545
           PG+R    G  P  F  S + PLE ATE+AKEAD+YNGFNLVLAD+ +  MVY+SN+P
Sbjct: 77  PGART--RGDLPLRFLQSNKSPLEVATEVAKEADEYNGFNLVLADLTTNVMVYVSNRP 132



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>AK122100:Os03g0749300 |
          Length = 625

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -2

Query: 710 LNWYSQSGSTPVSGTADLSALTVSVISSSTICFKETSASS 591
           + W  Q G+   +GT  LSA+  +V  S+T+ + E   SS
Sbjct: 452 ITWQGQPGNNITAGTTILSAIKATVDPSTTVVYSENPDSS 491



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>AK119203:Os03g0749300 |
          Length = 475

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -2

Query: 710 LNWYSQSGSTPVSGTADLSALTVSVISSSTICFKETSASS 591
           + W  Q G+   +GT  LSA+  +V  S+T+ + E   SS
Sbjct: 302 ITWQGQPGNNITAGTTILSAIKATVDPSTTVVYSENPDSS 341



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>AK065044:Os03g0749300 |
          Length = 625

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -2

Query: 710 LNWYSQSGSTPVSGTADLSALTVSVISSSTICFKETSASS 591
           + W  Q G+   +GT  LSA+  +V  S+T+ + E   SS
Sbjct: 452 ITWQGQPGNNITAGTTILSAIKATVDPSTTVVYSENPDSS 491



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>Os12g0524600:Os12g0524600 |
          Length = 1425

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 11/75 (14%)
 Frame = -2

Query: 932 SVSLCRHTHHPIYVPRKACYCAISIRNCT-RFSFHKL----------LAKDLS*KVTSPS 786
           SVS  RH   P++ PR++C  A     CT R   H L          +    S  +  PS
Sbjct: 719 SVSPERHRREPLHPPRRSCSAARPSPPCTGRPHLHHLRHRSGKVVLGIVSPPSKSLRGPS 778

Query: 785 SFTPMAAMLRVPYLA 741
           S +P+  ++ VP +A
Sbjct: 779 SSSPIVLVVDVPSVA 793



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>Os09g0401600:Os09g0401600 |
          Length = 433

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 78  STHVFRQSPDPFAFSTGPSPRRPCASRR 161
           + HV    PDP +  + P+P RP A RR
Sbjct: 29  TAHVLGSGPDPSSRPSNPTPSRPAAPRR 56



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>AK066451:Os12g0597600 |
          Length = 367

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 20/59 (33%), Positives = 26/59 (44%)
 Frame = +3

Query: 357 PTSGRPAPGSRRGPEGSFP*GFSRQGPLEYATEIAKEADQYNGFNLVLADVHSGTMVYI 533
           PT   PA G++  P GS     S Q PL YA  +   A    G ++     HSG  + I
Sbjct: 221 PTGAPPASGNQHPPHGSSQITHSMQVPLSYADAVIGAA----GASISYIRRHSGATISI 275



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>Os01g0170300:Os01g0170300 |
          Length = 1117

 Score = 27.7 bits (60), Expect(2) = 3.3
 Identities = 15/56 (26%), Positives = 22/56 (39%)
 Frame = -1

Query: 906 PPNICSSQGLLLCHLHSKLY*ILIPQAAGQGPLVESYLTIQFHPDGGHAPCPVSCL 739
           PP I   + L    LH      ++P    QG     YL + ++  GG  P  +  L
Sbjct: 507 PPEIAGCRNLTFVDLHGNAIAGVLPPGLFQGTPSLQYLDLSYNAIGGAIPANIGML 562



 Score = 20.4 bits (41), Expect(2) = 3.3
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = -2

Query: 965 STGTIQSCLPPSVSLCRH 912
           ST  +   +PP ++ CR+
Sbjct: 498 STNRLSGAIPPEIAGCRN 515



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>AK110454: |
          Length = 1074

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +3

Query: 15   PPSAVLVVLYPTTGPAVTEPASTHVFRQSPDPFAFSTGPS 134
            PPSAV + L+P+ GP+    A+       P P     G S
Sbjct: 970  PPSAVGIALFPSEGPSTPAEAARRERETRPGPRPLQAGES 1009



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>AK109579:Os07g0606800 |
          Length = 367

 Score = 28.9 bits (63), Expect = 6.1
 Identities = 19/54 (35%), Positives = 23/54 (42%)
 Frame = +2

Query: 2   PSRLSTVGRPRRALPNDGPRGHRAREHARVPTISRSLRLLHRTEPPTAMCIAAW 163
           P R+S + R    LP    R H A   A VP   R      R  PPT +C+  W
Sbjct: 225 PERISWLWRA--FLPPGATRDHEA---ANVPAALRRDAERRRAFPPTMVCVGGW 273



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>Os12g0450200:Os12g0450200 |
          Length = 3154

 Score = 28.5 bits (62), Expect = 8.0
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +3

Query: 42   YPTTGPAVTEPASTHVFRQSPDPFAFSTGPSPRRPCASRRG 164
            + TTG A T P +    R +  P AF+   SPR+P ++  G
Sbjct: 2462 HSTTGLASTGPCADFPDRSASSPAAFTRPASPRQPPSAGPG 2502



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>AK110092: |
          Length = 981

 Score = 28.5 bits (62), Expect = 8.0
 Identities = 23/62 (37%), Positives = 29/62 (46%)
 Frame = -2

Query: 767 AMLRVPYLACPFSVSMNIELNWYSQSGSTPVSGTADLSALTVSVISSSTICFKETSASSC 588
           AML V   A P        + W  +S  TP+   A L AL     SS ++CF  T A+S 
Sbjct: 600 AMLPVADQAWPLR-----SVEWVLES-DTPIPPNAALPALDTIPPSSLSLCFTSTPAASG 653

Query: 587 AA 582
           AA
Sbjct: 654 AA 655


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 30,701,820
Number of extensions: 746513
Number of successful extensions: 2580
Number of sequences better than 10.0: 13
Number of HSP's gapped: 2575
Number of HSP's successfully gapped: 18
Length of query: 340
Length of database: 15,399,855
Length adjustment: 101
Effective length of query: 239
Effective length of database: 11,355,714
Effective search space: 2714015646
Effective search space used: 2714015646
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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