ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf156k03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK241286.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 157 9e-35
2ref|NM_001060104.1| Oryza sativa (japonica cultivar-group) Os04g... 135 3e-28
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 121 5e-24
4emb|AL606628.3|OSJN00055 Oryza sativa genomic DNA, chromosome 4,... 121 5e-24
5gb|AY112005.1| Zea mays CL26244_1 mRNA sequence 50 0.016
6emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome 48 0.062
7emb|Z48053.1|BHV130KB Bovine herpesvirus type 1 (Cooper) DNA (30... 48 0.062
8gb|AC192624.2| Gallus gallus BAC clone CH261-104D15 from chromos... 42 3.9
9ref|NM_001055793.1| Oryza sativa (japonica cultivar-group) Os03g... 42 3.9
10gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete s... 42 3.9
11ref|XR_007356.1| PREDICTED: Rattus norvegicus similar to Cofilin... 42 3.9
12ref|XR_005490.1| PREDICTED: Rattus norvegicus similar to Cofilin... 42 3.9
13dbj|AB254080.1| Streptomyces kanamyceticus kanamycin biosyntheti... 42 3.9
14gb|BT025098.1| Drosophila melanogaster IP12358 full insert cDNA 42 3.9
15gb|AC099009.2| Drosophila melanogaster clone BACR17M11, complete... 42 3.9
16gb|AC122470.3| Mus musculus BAC clone RP24-320O6 from chromosome... 42 3.9
17gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome... 42 3.9
18ref|NM_136670.2| Drosophila melanogaster CG1776-RA (CG1776), mRNA 42 3.9
19gb|AC093151.2| Homo sapiens chromosome 1 clone RP11-399E6, compl... 42 3.9
20gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 42 3.9
21dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 3.9
22gb|AY060726.1| Drosophila melanogaster GH17420 full length cDNA 42 3.9
23emb|BX649503.3| Zebrafish DNA sequence from clone DKEYP-90A8 in ... 42 3.9
24emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete ... 42 3.9
25ref|NM_001031442.1| Gallus gallus DTW domain containing 2 (DTWD2... 42 3.9
26gb|AC154764.2| Mus musculus BAC clone RP24-423N7 from chromosome... 42 3.9
27dbj|AK111395.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 3.9
28gb|AC005894.1|AC005894 Drosophila melanogaster, chromosome 2R, r... 42 3.9
29emb|CT027564.7| Mouse DNA sequence from clone RP24-293N14 on chr... 42 3.9
30gb|AC151578.1| Mus musculus BAC clone RP23-218K4 from 18, comple... 42 3.9

>dbj|AK241286.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065137C21,
           full insert sequence
          Length = 1329
 Score =  157 bits (79), Expect = 9e-35
 Identities = 205/247 (82%), Gaps = 5/247 (2%)
 Strand = Plus / Plus

                                                                       
Query: 299 gagcttggcgggggcacgtggctggggtgcacgaagggagggaaactggccttcctgacc 358
           ||||| ||||| |||||||||||||||||||||| ||  ||||| |||||||||||||||
Sbjct: 286 gagctcggcggcggcacgtggctggggtgcacgagggacgggaagctggccttcctgacc 345

                                                                       
Query: 359 aacgtccgggaggccagcccccgggtcgaggcgaggtccagaggggagcttcccgtaagg 418
           |||||||||||| || || | | |||||  || | ||||||||||||||| ||||| |||
Sbjct: 346 aacgtccgggagcccggcacgctggtcggagccaagtccagaggggagctccccgtcagg 405

                                                                       
Query: 419 tttctccagg-----cagggtccattggagtatgcaactgaaattgcaaaggaagcagat 473
           || |||||||     ||  |||| |||||||||||    ||||| || ||||||||||||
Sbjct: 406 ttcctccagggaaaccaatgtccgttggagtatgcggaagaaatagccaaggaagcagat 465

                                                                       
Query: 474 cagtacaatggttttaatcttgtattggccgatgtgcattcaggaaccatggtgtacatc 533
           ||||||||||| ||||| ||||||||||| |||||||| || ||||  ||||  ||||| 
Sbjct: 466 cagtacaatggctttaaccttgtattggctgatgtgcagtcgggaaatatggcttacata 525

                  
Query: 534 tctaata 540
           |||||||
Sbjct: 526 tctaata 532



 Score =  135 bits (68), Expect = 3e-28
 Identities = 179/216 (82%)
 Strand = Plus / Plus

                                                                       
Query: 550 ttgcgcttaggacagaacttcaacagttttcttgccgcacatgacgatgcagaagtctct 609
           |||||||||||||| |  |||||||| ||||||||  |||| || | ||| |||||||||
Sbjct: 622 ttgcgcttaggacaaagtttcaacagatttcttgcaacacaggatggtgcggaagtctct 681

                                                                       
Query: 610 ttgaagcagatggttgaagaactgatgacggatacggtcaaggctgacagatctgcggtg 669
           ||  | ||||||||||||||  |||||| |||| | ||||||||||| | |||||| |||
Sbjct: 682 ttacaacagatggttgaagagttgatgatggatcctgtcaaggctgataaatctgcagtg 741

                                                                       
Query: 670 cctgacactggcgtggatcctgactgggaataccagttgagttctatattcatcgacacg 729
           || || ||||| || || |||||||||||||||||| | || ||||||||||| ||||| 
Sbjct: 742 ccagatactggtgtcgaccctgactgggaataccagctaagctctatattcattgacact 801

                                               
Query: 730 gaaaagggacaggcaagatacgggacacggagcatg 765
           || || ||||||||| |||| || ||||| ||||||
Sbjct: 802 gagaaaggacaggcacgatatggaacacgaagcatg 837



 Score = 97.6 bits (49), Expect = 8e-17
 Identities = 76/85 (89%)
 Strand = Plus / Plus

                                                                       
Query: 141 cggccatgtgcatcgcggcgtggacatggcaggctcacccggcgtacggcctgctcctcc 200
           |||| |||||||||||||||||| |||||||| | || || ||| || ||||||||||||
Sbjct: 44  cggcgatgtgcatcgcggcgtgggcatggcagtcccaacctgcgcaccgcctgctcctcc 103

                                    
Query: 201 tcttcaaccgcgacgagtatcactc 225
           ||||||||||||||||||| |||||
Sbjct: 104 tcttcaaccgcgacgagtaccactc 128



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>ref|NM_001060104.1| Oryza sativa (japonica cultivar-group) Os04g0564500 (Os04g0564500)
           mRNA, complete cds
          Length = 945

 Score =  135 bits (68), Expect = 3e-28
 Identities = 179/216 (82%)
 Strand = Plus / Plus

                                                                       
Query: 550 ttgcgcttaggacagaacttcaacagttttcttgccgcacatgacgatgcagaagtctct 609
           |||||||||||||| |  |||||||| ||||||||  |||| || | ||| |||||||||
Sbjct: 574 ttgcgcttaggacaaagtttcaacagatttcttgcaacacaggatggtgcggaagtctct 633

                                                                       
Query: 610 ttgaagcagatggttgaagaactgatgacggatacggtcaaggctgacagatctgcggtg 669
           ||  | ||||||||||||||  |||||| |||| | ||||||||||| | |||||| |||
Sbjct: 634 ttacaacagatggttgaagagttgatgatggatcctgtcaaggctgataaatctgcagtg 693

                                                                       
Query: 670 cctgacactggcgtggatcctgactgggaataccagttgagttctatattcatcgacacg 729
           || || ||||| || || |||||||||||||||||| | || ||||||||||| ||||| 
Sbjct: 694 ccagatactggtgtcgaccctgactgggaataccagctaagctctatattcattgacact 753

                                               
Query: 730 gaaaagggacaggcaagatacgggacacggagcatg 765
           || || ||||||||| |||| || ||||| ||||||
Sbjct: 754 gagaaaggacaggcacgatatggaacacgaagcatg 789



 Score =  127 bits (64), Expect = 8e-26
 Identities = 204/248 (82%), Gaps = 7/248 (2%)
 Strand = Plus / Plus

                                                                       
Query: 299 gagcttggcgggggcacgtggctggggtgcacgaagggagggaaactggccttcctgacc 358
           ||||| ||||| |||||||||||||||||||||| ||  ||||| |||||||||||||||
Sbjct: 238 gagctcggcggcggcacgtggctggggtgcacgagggacgggaagctggccttcctgacc 297

                                                                       
Query: 359 aacgtccgggaggccagcccccgggtc-gaggcgaggtccagaggggagcttcccgtaag 417
           |||||||||||| || || | | |||| ||  | | || |||||||||||| ||||| ||
Sbjct: 298 aacgtccgggagcccggcacgctggtcggacccaacgt-cagaggggagctccccgtcag 356

                                                                       
Query: 418 gtttctccagg-----cagggtccattggagtatgcaactgaaattgcaaaggaagcaga 472
           ||| |||||||     ||  |||| |||||||||||    ||||| || |||||||||||
Sbjct: 357 gttcctccagggaaaccaatgtccgttggagtatgcggaagaaatagccaaggaagcaga 416

                                                                       
Query: 473 tcagtacaatggttttaatcttgtattggccgatgtgcattcaggaaccatggtgtacat 532
           |||||||||||| ||||| ||||||||||| |||||||| || ||||  ||||  |||||
Sbjct: 417 tcagtacaatggctttaaccttgtattggctgatgtgcagtcgggaaatatggcttacat 476

                   
Query: 533 ctctaata 540
            |||||||
Sbjct: 477 atctaata 484



 Score = 95.6 bits (48), Expect = 3e-16
 Identities = 72/80 (90%)
 Strand = Plus / Plus

                                                                       
Query: 146 atgtgcatcgcggcgtggacatggcaggctcacccggcgtacggcctgctcctcctcttc 205
           |||||||||||||||||| |||||||| | || || ||| || |||||||||||||||||
Sbjct: 1   atgtgcatcgcggcgtgggcatggcagtcccaacctgcgcaccgcctgctcctcctcttc 60

                               
Query: 206 aaccgcgacgagtatcactc 225
           |||||||||||||| |||||
Sbjct: 61  aaccgcgacgagtaccactc 80



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score =  121 bits (61), Expect = 5e-24
 Identities = 160/193 (82%)
 Strand = Plus / Plus

                                                                            
Query: 550      ttgcgcttaggacagaacttcaacagttttcttgccgcacatgacgatgcagaagtctct 609
                |||||||||||||| |  |||||||| ||||||||  |||| || | ||| |||||||||
Sbjct: 28264750 ttgcgcttaggacaaagtttcaacagatttcttgcaacacaggatggtgcggaagtctct 28264809

                                                                            
Query: 610      ttgaagcagatggttgaagaactgatgacggatacggtcaaggctgacagatctgcggtg 669
                ||  | ||||||||||||||  |||||| |||| | ||||||||||| | |||||| |||
Sbjct: 28264810 ttacaacagatggttgaagagttgatgatggatcctgtcaaggctgataaatctgcagtg 28264869

                                                                            
Query: 670      cctgacactggcgtggatcctgactgggaataccagttgagttctatattcatcgacacg 729
                || || ||||| || || |||||||||||||||||| | || ||||||||||| ||||| 
Sbjct: 28264870 ccagatactggtgtcgaccctgactgggaataccagctaagctctatattcattgacact 28264929

                             
Query: 730      gaaaagggacagg 742
                || || |||||||
Sbjct: 28264930 gagaaaggacagg 28264942



 Score = 97.6 bits (49), Expect = 8e-17
 Identities = 76/85 (89%)
 Strand = Plus / Plus

                                                                            
Query: 141      cggccatgtgcatcgcggcgtggacatggcaggctcacccggcgtacggcctgctcctcc 200
                |||| |||||||||||||||||| |||||||| | || || ||| || ||||||||||||
Sbjct: 28263424 cggcgatgtgcatcgcggcgtgggcatggcagtcccaacctgcgcaccgcctgctcctcc 28263483

                                         
Query: 201      tcttcaaccgcgacgagtatcactc 225
                ||||||||||||||||||| |||||
Sbjct: 28263484 tcttcaaccgcgacgagtaccactc 28263508



 Score = 95.6 bits (48), Expect = 3e-16
 Identities = 66/72 (91%)
 Strand = Plus / Plus

                                                                            
Query: 299      gagcttggcgggggcacgtggctggggtgcacgaagggagggaaactggccttcctgacc 358
                ||||| ||||| |||||||||||||||||||||| ||  ||||| |||||||||||||||
Sbjct: 28263666 gagctcggcggcggcacgtggctggggtgcacgagggacgggaagctggccttcctgacc 28263725

                            
Query: 359      aacgtccgggag 370
                ||||||||||||
Sbjct: 28263726 aacgtccgggag 28263737



 Score = 79.8 bits (40), Expect = 2e-11
 Identities = 76/88 (86%)
 Strand = Plus / Plus

                                                                            
Query: 453      gaaattgcaaaggaagcagatcagtacaatggttttaatcttgtattggccgatgtgcat 512
                ||||| || ||||||||||||||||||||||| ||||| ||||||||||| |||||||| 
Sbjct: 28264293 gaaatagccaaggaagcagatcagtacaatggctttaaccttgtattggctgatgtgcag 28264352

                                            
Query: 513      tcaggaaccatggtgtacatctctaata 540
                || ||||  ||||  ||||| |||||||
Sbjct: 28264353 tcgggaaatatggcttacatatctaata 28264380



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>emb|AL606628.3|OSJN00055 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0017B10,
             complete sequence
          Length = 150957

 Score =  121 bits (61), Expect = 5e-24
 Identities = 160/193 (82%)
 Strand = Plus / Plus

                                                                         
Query: 550   ttgcgcttaggacagaacttcaacagttttcttgccgcacatgacgatgcagaagtctct 609
             |||||||||||||| |  |||||||| ||||||||  |||| || | ||| |||||||||
Sbjct: 57058 ttgcgcttaggacaaagtttcaacagatttcttgcaacacaggatggtgcggaagtctct 57117

                                                                         
Query: 610   ttgaagcagatggttgaagaactgatgacggatacggtcaaggctgacagatctgcggtg 669
             ||  | ||||||||||||||  |||||| |||| | ||||||||||| | |||||| |||
Sbjct: 57118 ttacaacagatggttgaagagttgatgatggatcctgtcaaggctgataaatctgcagtg 57177

                                                                         
Query: 670   cctgacactggcgtggatcctgactgggaataccagttgagttctatattcatcgacacg 729
             || || ||||| || || |||||||||||||||||| | || ||||||||||| ||||| 
Sbjct: 57178 ccagatactggtgtcgaccctgactgggaataccagctaagctctatattcattgacact 57237

                          
Query: 730   gaaaagggacagg 742
             || || |||||||
Sbjct: 57238 gagaaaggacagg 57250



 Score = 97.6 bits (49), Expect = 8e-17
 Identities = 76/85 (89%)
 Strand = Plus / Plus

                                                                         
Query: 141   cggccatgtgcatcgcggcgtggacatggcaggctcacccggcgtacggcctgctcctcc 200
             |||| |||||||||||||||||| |||||||| | || || ||| || ||||||||||||
Sbjct: 55732 cggcgatgtgcatcgcggcgtgggcatggcagtcccaacctgcgcaccgcctgctcctcc 55791

                                      
Query: 201   tcttcaaccgcgacgagtatcactc 225
             ||||||||||||||||||| |||||
Sbjct: 55792 tcttcaaccgcgacgagtaccactc 55816



 Score = 95.6 bits (48), Expect = 3e-16
 Identities = 66/72 (91%)
 Strand = Plus / Plus

                                                                         
Query: 299   gagcttggcgggggcacgtggctggggtgcacgaagggagggaaactggccttcctgacc 358
             ||||| ||||| |||||||||||||||||||||| ||  ||||| |||||||||||||||
Sbjct: 55974 gagctcggcggcggcacgtggctggggtgcacgagggacgggaagctggccttcctgacc 56033

                         
Query: 359   aacgtccgggag 370
             ||||||||||||
Sbjct: 56034 aacgtccgggag 56045



 Score = 79.8 bits (40), Expect = 2e-11
 Identities = 76/88 (86%)
 Strand = Plus / Plus

                                                                         
Query: 453   gaaattgcaaaggaagcagatcagtacaatggttttaatcttgtattggccgatgtgcat 512
             ||||| || ||||||||||||||||||||||| ||||| ||||||||||| |||||||| 
Sbjct: 56601 gaaatagccaaggaagcagatcagtacaatggctttaaccttgtattggctgatgtgcag 56660

                                         
Query: 513   tcaggaaccatggtgtacatctctaata 540
             || ||||  ||||  ||||| |||||||
Sbjct: 56661 tcgggaaatatggcttacatatctaata 56688



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>gb|AY112005.1| Zea mays CL26244_1 mRNA sequence
          Length = 618

 Score = 50.1 bits (25), Expect = 0.016
 Identities = 217/281 (77%)
 Strand = Plus / Minus

                                                                       
Query: 595 gatgcagaagtctctttgaagcagatggttgaagaactgatgacggatacggtcaaggct 654
           |||||||||| |||||| || || ||||| |||||  |||||| |||||| | ||   ||
Sbjct: 467 gatgcagaagcctctttaaaacaaatggtagaagagttgatgatggatactgccagacct 408

                                                                       
Query: 655 gacagatctgcggtgcctgacactggcgtggatcctgactgggaataccagttgagttct 714
           || ||||||  |||||||||||| ||||  || ||||| ||||| | | || | || || 
Sbjct: 407 gatagatctatggtgcctgacaccggcgccgaccctgagtgggagtccaagctaagctca 348

                                                                       
Query: 715 atattcatcgacacggaaaagggacaggcaagatacgggacacggagcatggccgccatc 774
           |||||||| ||| | | ||||| ||||||  |||| || ||||| |||||||  ||  | 
Sbjct: 347 atattcattgaccctgcaaaggaacaggcccgatatggaacacgaagcatggtggcgcta 288

                                                                       
Query: 775 ggggtgaaactggatggtgaggtaactttctacgagaggtccttggccagcagcttgtgg 834
           |  | |||| |||| ||||||||||| ||||| || |||| |||||  | ||| ||||||
Sbjct: 287 gcagcgaaattggaaggtgaggtaacattctatgaaaggtacttggagaacagtttgtgg 228

                                                    
Query: 835 aatgagaatctagtacagtttcgaatggagatggcacaata 875
           || ||||||||  ||||||| |  ||||||| ||| |||||
Sbjct: 227 aaggagaatctcatacagttccagatggagaaggcccaata 187



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>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome
          Length = 135301

 Score = 48.1 bits (24), Expect = 0.062
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 252   gggccgccgcgggggaggagggcg 275
             ||||||||||||||||||||||||
Sbjct: 84321 gggccgccgcgggggaggagggcg 84344



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>emb|Z48053.1|BHV130KB Bovine herpesvirus type 1 (Cooper) DNA (30 kb)
          Length = 30000

 Score = 48.1 bits (24), Expect = 0.062
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 252   gggccgccgcgggggaggagggcg 275
             ||||||||||||||||||||||||
Sbjct: 17422 gggccgccgcgggggaggagggcg 17445



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>gb|AC192624.2| Gallus gallus BAC clone CH261-104D15 from chromosome z, complete
             sequence
          Length = 224359

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 258   ccgcgggggaggagggcgagg 278
             |||||||||||||||||||||
Sbjct: 89287 ccgcgggggaggagggcgagg 89267



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>ref|NM_001055793.1| Oryza sativa (japonica cultivar-group) Os03g0195500 (Os03g0195500)
           mRNA, complete cds
          Length = 1430

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 180 cggcgtacggcctgctcctcc 200
           |||||||||||||||||||||
Sbjct: 560 cggcgtacggcctgctcctcc 540



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>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence
          Length = 21146708

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 811     aggtccttggccagcagcttg 831
               |||||||||||||||||||||
Sbjct: 5607327 aggtccttggccagcagcttg 5607347



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>ref|XR_007356.1| PREDICTED: Rattus norvegicus similar to Cofilin-1 (Cofilin,
           non-muscle isoform) (LOC293567), mRNA
          Length = 734

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 265 ggaggagggcgaggagatcct 285
           |||||||||||||||||||||
Sbjct: 228 ggaggagggcgaggagatcct 248



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>ref|XR_005490.1| PREDICTED: Rattus norvegicus similar to Cofilin-1 (Cofilin,
           non-muscle isoform) (LOC293567), mRNA
          Length = 734

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 265 ggaggagggcgaggagatcct 285
           |||||||||||||||||||||
Sbjct: 228 ggaggagggcgaggagatcct 248



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>dbj|AB254080.1| Streptomyces kanamyceticus kanamycin biosynthetic gene cluster, strain:
             NBRC 13414
          Length = 205447

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 22    cggccgtcctcgtcgtgctct 42
             |||||||||||||||||||||
Sbjct: 44050 cggccgtcctcgtcgtgctct 44070



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>gb|BT025098.1| Drosophila melanogaster IP12358 full insert cDNA
          Length = 2067

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 811 aggtccttggccagcagcttg 831
           |||||||||||||||||||||
Sbjct: 656 aggtccttggccagcagcttg 636



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>gb|AC099009.2| Drosophila melanogaster clone BACR17M11, complete sequence
          Length = 188872

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 811    aggtccttggccagcagcttg 831
              |||||||||||||||||||||
Sbjct: 115312 aggtccttggccagcagcttg 115332



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>gb|AC122470.3| Mus musculus BAC clone RP24-320O6 from chromosome 18, complete sequence
          Length = 190916

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 424    ccaggcagggtccattggagt 444
              |||||||||||||||||||||
Sbjct: 132346 ccaggcagggtccattggagt 132366



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>gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0064E16, complete sequence
          Length = 159092

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 180   cggcgtacggcctgctcctcc 200
             |||||||||||||||||||||
Sbjct: 68375 cggcgtacggcctgctcctcc 68355



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>ref|NM_136670.2| Drosophila melanogaster CG1776-RA (CG1776), mRNA
          Length = 2075

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 811  aggtccttggccagcagcttg 831
            |||||||||||||||||||||
Sbjct: 1197 aggtccttggccagcagcttg 1177



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>gb|AC093151.2| Homo sapiens chromosome 1 clone RP11-399E6, complete sequence
          Length = 188276

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 319    gctggggtgcacgaagggagggaaa 343
              ||||||| |||||||||||||||||
Sbjct: 113438 gctggggagcacgaagggagggaaa 113414



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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 224     tccaggccgacgcggccagcg 244
               |||||||||||||||||||||
Sbjct: 2101216 tccaggccgacgcggccagcg 2101236



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 180     cggcgtacggcctgctcctcc 200
               |||||||||||||||||||||
Sbjct: 4926387 cggcgtacggcctgctcctcc 4926407



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>gb|AY060726.1| Drosophila melanogaster GH17420 full length cDNA
          Length = 2057

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 811  aggtccttggccagcagcttg 831
            |||||||||||||||||||||
Sbjct: 1179 aggtccttggccagcagcttg 1159



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>emb|BX649503.3| Zebrafish DNA sequence from clone DKEYP-90A8 in linkage group 4,
             complete sequence
          Length = 189355

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 477   tacaatggttttaatcttgta 497
             |||||||||||||||||||||
Sbjct: 92337 tacaatggttttaatcttgta 92317



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>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29
          Length = 293050

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 379   ccgggtcgaggcgaggtccag 399
             |||||||||||||||||||||
Sbjct: 51836 ccgggtcgaggcgaggtccag 51816



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>ref|NM_001031442.1| Gallus gallus DTW domain containing 2 (DTWD2), mRNA
 emb|AJ719497.1| Gallus gallus mRNA for hypothetical protein, clone 2n22
          Length = 4179

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 258 ccgcgggggaggagggcgagg 278
           |||||||||||||||||||||
Sbjct: 69  ccgcgggggaggagggcgagg 89



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>gb|AC154764.2| Mus musculus BAC clone RP24-423N7 from chromosome 16, complete
            sequence
          Length = 159556

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 456  attgcaaaggaagcagatcagtaca 480
            |||||||||||||||||| ||||||
Sbjct: 2613 attgcaaaggaagcagataagtaca 2637



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>dbj|AK111395.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-D04, full
           insert sequence
          Length = 1430

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 180 cggcgtacggcctgctcctcc 200
           |||||||||||||||||||||
Sbjct: 560 cggcgtacggcctgctcctcc 540



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>gb|AC005894.1|AC005894 Drosophila melanogaster, chromosome 2R, region 46A1-46B2, P1 clones
              DS00050, DS00191, and DS05369, complete sequence
          Length = 196337

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 811    aggtccttggccagcagcttg 831
              |||||||||||||||||||||
Sbjct: 110734 aggtccttggccagcagcttg 110754



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>emb|CT027564.7| Mouse DNA sequence from clone RP24-293N14 on chromosome 16, complete
              sequence
          Length = 180784

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 456    attgcaaaggaagcagatcagtaca 480
              |||||||||||||||||| ||||||
Sbjct: 166756 attgcaaaggaagcagataagtaca 166780



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>gb|AC151578.1| Mus musculus BAC clone RP23-218K4 from 18, complete sequence
          Length = 192387

 Score = 42.1 bits (21), Expect = 3.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 424    ccaggcagggtccattggagt 444
              |||||||||||||||||||||
Sbjct: 127966 ccaggcagggtccattggagt 127946


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 152,241,505
Number of extensions: 8092717
Number of successful extensions: 151065
Number of sequences better than 10.0: 30
Number of HSP's gapped: 151064
Number of HSP's successfully gapped: 42
Length of query: 1020
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 997
Effective length of database: 18,503,978,556
Effective search space: 18448466620332
Effective search space used: 18448466620332
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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