ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf151b16 |
|---|---|
| Clone Library Name | barley_pub |
>P42731:PABP2_ARATH Polyadenylate-binding protein 2 - Arabidopsis thaliana (Mouse-ear| cress) Length = 629 Score = 650 bits (1677), Expect = 0.0 Identities = 349/615 (56%), Positives = 427/615 (69%), Gaps = 1/615 (0%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LYVGDLD +V D+QLFD F Q+G+VV+VRVCRD+ TR SLGY YVNF++P DAARA++ L Sbjct: 38 LYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQEL 97 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 N+ P+ GKPIR+MYS+RDPS R+SGA NIFIKNLD+SID+KAL+DTFS+FGNI+SCKVA Sbjct: 98 NYIPLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAV 157 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNV 832 + SG+SKGYGFVQY +ESAQ AI +LNGMLLNDK+VYVGPF+R+QER++ KF NV Sbjct: 158 DSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRRQERDSTANKTKFTNV 217 Query: 833 YVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNG 1012 YVKNL+ESTT+D+LK FG +G ITS +V++ +GKS+ FGFVNFEN DDA AVE LNG Sbjct: 218 YVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFENADDAARAVESLNG 277 Query: 1013 KKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKE 1192 KFDDKE YVGRAQKKSERE +L+ +E++ KE AD+ Q +NLY+KNLD S+ DEKLKE Sbjct: 278 HKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSI-SDEKLKE 336 Query: 1193 LFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRK 1372 +F+ FGT+TS KVMRD NG +KGSGFVAF + E+AT A+ ++GKM+ SKPLYVA+AQRK Sbjct: 337 IFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMSQLSGKMIESKPLYVAIAQRK 396 Query: 1373 EERRARLQAQFSQ-XXXXXXXXXXXXXXXXXXXXXXXXQQLFYGQPPPAFVNPQPGYGFQ 1549 E+RR RLQAQFSQ QQ+FYGQ PPA + PQPGYG+Q Sbjct: 397 EDRRVRLQAQFSQVRPVAMQPSVGPRMPVYPPGGPGIGQQMFYGQAPPAMIPPQPGYGYQ 456 Query: 1550 QHMIPGMRPGVAPMPNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPXXXXXX 1729 Q ++PGMRPG P+P+F P Sbjct: 457 QQLVPGMRPGGGPVPSFFMPMVQPQQQRPGGGRRPGGIQHSQQQN--------PMMQQQM 508 Query: 1730 XXXXXXXXMPEAAFRGVGGMAPSLYEMGRMTPGDTGAPQQVXXXXXXXXXXXXPPEQQRL 1909 P+ RG G P Y+MG P GA PEQQR Sbjct: 509 HPRGRMFRYPQG--RGGSGDVPP-YDMGNNMPLTIGA--------LASNLSNATPEQQRT 557 Query: 1910 MLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKSKVAEAMEVLRSAQQQ 2089 MLGE LYPLV+Q+E + AAKVTGMLLEMDQTEVLHL+ESP+ALK+KVAEAM+VLRS Sbjct: 558 MLGEVLYPLVEQVEAESAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMDVLRSV--- 614 Query: 2090 QTNVPADQLAALSLS 2134 +QLA+L+LS Sbjct: 615 AAGGATEQLASLNLS 629 Score = 102 bits (253), Expect = 9e-21 Identities = 63/186 (33%), Positives = 101/186 (54%), Gaps = 1/186 (0%) Frame = +2 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHAVED 1003 ++YV +L + T+ L + FG G + +V V R +S +G+VNF NP DA A+++ Sbjct: 37 SLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQE 96 Query: 1004 LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEK 1183 LN K + V S R+ ++ R+ N+++KNLD S+ D + Sbjct: 97 LNYIPLYGKPIRV----MYSHRDPSVR------------RSGAGNIFIKNLDESI-DHKA 139 Query: 1184 LKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALA 1363 L + F+ FG I SCKV DS+G +KG GFV + + E A +A+ +NG ++ K +YV Sbjct: 140 LHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPF 199 Query: 1364 QRKEER 1381 R++ER Sbjct: 200 LRRQER 205
>O64380:PABP3_ARATH Polyadenylate-binding protein 3 - Arabidopsis thaliana (Mouse-ear| cress) Length = 660 Score = 480 bits (1236), Expect = e-134 Identities = 254/436 (58%), Positives = 314/436 (72%), Gaps = 4/436 (0%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LY GDLD V +A LFD+F V +VVSVRVCRD N R SLGYAY+NFS+P DA RA+E L Sbjct: 51 LYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQNRR-SLGYAYINFSNPNDAYRAMEAL 109 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 N+TP+ +PIRIM SNRDPS+R SG NIFIKNLD SIDNKAL++TFS+FG ILSCKVA Sbjct: 110 NYTPLFDRPIRIMLSNRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILSCKVAM 169 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQER---ENVFGSPKF 823 +++G SKGYGFVQ+E++ESAQ AI++LNGML+NDK+V+VG F+R+QER EN +P+F Sbjct: 170 DVTGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARDENT-PTPRF 228 Query: 824 NNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVED 1003 NVYVKNL + ED L++ FG FG I+S +V+R G SRCFGFVNFE + A AVE Sbjct: 229 TNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEK 288 Query: 1004 LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEK 1183 +NG D LYVGRAQKKSERE +L+ FE+ +++QG NLYLKNLD SV DDEK Sbjct: 289 MNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSV-DDEK 347 Query: 1184 LKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALA 1363 LKE+F+E+G +TS KVM + G+++G GFVA+ + E+A RAL MNGKM+G KPLY+ALA Sbjct: 348 LKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALA 407 Query: 1364 QRKEERRARLQAQFSQXXXXXXXXXXXXXXXXXXXXXXXXQQLFYGQPPPAFVNPQP-GY 1540 QRKE+RRA LQA FSQ Q ++ GQ + V QP GY Sbjct: 408 QRKEDRRAHLQALFSQ--IRAPGPMSGFHHPPGGPMPGPPQHMYVGQNGASMVPSQPIGY 465 Query: 1541 GFQQHMIPGMRPGVAP 1588 GFQ +PGMRPG P Sbjct: 466 GFQPQFMPGMRPGSGP 481 Score = 152 bits (384), Expect = 6e-36 Identities = 91/287 (31%), Positives = 148/287 (51%) Frame = +2 Query: 551 ANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINE 730 ++++ +LD + L+D F N++S +V + + S GY ++ + A A+ Sbjct: 49 SSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQNRRSLGYAYINFSNPNDAYRAMEA 108 Query: 731 LNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITS 910 LN L D+ + + + + G N+++KNL S L E F +FG I S Sbjct: 109 LNYTPLFDRPIRI-MLSNRDPSTRLSGK---GNIFIKNLDASIDNKALFETFSSFGTILS 164 Query: 911 VIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKES 1090 V G+S+ +GFV FE + A A++ LNG +DK+++VG ++ ER Sbjct: 165 CKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQER------- 217 Query: 1091 FEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGF 1270 + E + TN+Y+KNL + +DE L++ F +FG I+S VMRD +G ++ GF Sbjct: 218 ---ARDENTPTPRFTNVYVKNLPKEIGEDE-LRKTFGKFGVISSAVVMRDQSGNSRCFGF 273 Query: 1271 VAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRARLQAQFSQ 1411 V F+ +E A A+ MNG +G LYV AQ+K ER L+ +F Q Sbjct: 274 VNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFEQ 320 Score = 82.8 bits (203), Expect = 6e-15 Identities = 41/61 (67%), Positives = 50/61 (81%) Frame = +2 Query: 1892 PEQQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKSKVAEAMEVL 2071 P + MLGE LYPLV++ E AKVTGMLLEMDQ E+LHL+ESP+ALKSKV+EA++VL Sbjct: 584 PADRTRMLGEQLYPLVERHEPLHVAKVTGMLLEMDQAEILHLMESPEALKSKVSEALDVL 643 Query: 2072 R 2074 R Sbjct: 644 R 644
>Q05196:PABP5_ARATH Polyadenylate-binding protein 5 - Arabidopsis thaliana (Mouse-ear| cress) Length = 668 Score = 462 bits (1189), Expect = e-129 Identities = 243/445 (54%), Positives = 312/445 (70%), Gaps = 9/445 (2%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LYVGDLD SV ++ L D+F+QV V ++RVCRD+ T SLGYAYVNF++P DA+RA+E L Sbjct: 47 LYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDL-THRSLGYAYVNFANPEDASRAMESL 105 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 N+ P+ +PIRIM SNRDPS+R SG N+FIKNLD SIDNKALY+TFS+FG ILSCKVA Sbjct: 106 NYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILSCKVAM 165 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGS--PKFN 826 ++ G SKGYGFVQ+E++E+AQ AI++LNGMLLNDK+V+VG FVR+Q+R P F Sbjct: 166 DVVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRARSESGAVPSFT 225 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDL 1006 NVYVKNL + T+D LK+ FG +G I+S +V++ G SR FGFVNF +P+ A AVE + Sbjct: 226 NVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEKM 285 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 NG + LYVGRAQKKS+RE +L+ FE+ ++ QG+NLYLKNLD SV +DEKL Sbjct: 286 NGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSV-NDEKL 344 Query: 1187 KELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQ 1366 KE+F+E+G +TSCKVM +S G+++G GFVA+ + E+A A+ MNGKM+G KPLYVALAQ Sbjct: 345 KEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVALAQ 404 Query: 1367 RKEERRARLQAQFSQ------XXXXXXXXXXXXXXXXXXXXXXXXQQLFYGQPPPAFVNP 1528 RKEER+A LQ+ F+Q +F G V Sbjct: 405 RKEERQAHLQSLFTQIRSPGTMSPVPSPMSGFHHHPPGGPMSGPHHPMFIGHNGQGLVPS 464 Query: 1529 QP-GYGFQQHMIPGMRPGVAPMPNF 1600 QP GYG+Q +PGMRPG P PNF Sbjct: 465 QPMGYGYQVQFMPGMRPGAGP-PNF 488 Score = 103 bits (258), Expect = 2e-21 Identities = 63/187 (33%), Positives = 101/187 (54%), Gaps = 1/187 (0%) Frame = +2 Query: 824 NNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVED 1003 +++YV +L S E +L +LF P+ ++ V R +S + +VNF NP+DA A+E Sbjct: 45 SSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDLTHRSLGYAYVNFANPEDASRAMES 104 Query: 1004 LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGT-NLYLKNLDGSVDDDE 1180 LN D+ + + SN++ + R G N+++KNLD S+ D++ Sbjct: 105 LNYAPIRDRPIRI-----------------MLSNRDPSTRLSGKGNVFIKNLDASI-DNK 146 Query: 1181 KLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVAL 1360 L E F+ FGTI SCKV D G +KG GFV F+ E A A+ +NG ++ K ++V Sbjct: 147 ALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGH 206 Query: 1361 AQRKEER 1381 R+++R Sbjct: 207 FVRRQDR 213 Score = 89.0 bits (219), Expect = 8e-17 Identities = 46/82 (56%), Positives = 59/82 (71%) Frame = +2 Query: 1892 PEQQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKSKVAEAMEVL 2071 P++ MLG+ LYPLV+Q E AAKVTGMLLEMDQ E+LHL+ESP+ALK+KV+EA++VL Sbjct: 587 PDKHPRMLGDHLYPLVEQQEPANAAKVTGMLLEMDQAEILHLLESPEALKAKVSEALDVL 646 Query: 2072 RSAQQQQTNVPADQLAALSLSD 2137 R + D ALS S+ Sbjct: 647 RRSADPAAVSSVDDQFALSSSE 668
>Q9EPH8:PABP1_RAT Polyadenylate-binding protein 1 - Rattus norvegicus (Rat)| Length = 636 Score = 435 bits (1118), Expect = e-121 Identities = 221/375 (58%), Positives = 282/375 (75%), Gaps = 2/375 (0%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LYVGDL V +A L++ FS G ++S+RVCRD+ TR SLGYAYVNF PADA RAL+ + Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 NF + GKP+RIM+S RDPS RKSG NIFIKNLDKSIDNKALYDTFSAFGNILSCKV Sbjct: 73 NFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVC 132 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFG--SPKFN 826 + +G SKGYGFV +E E+A+ AI ++NGMLLND+KV+VG F ++ERE G + +F Sbjct: 133 DENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFT 191 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDL 1006 NVY+KN E ++ LKELFG FGP SV V+ + GKS+ FGFV+FE +DA AV+++ Sbjct: 192 NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 251 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 NGK+ + K++YVGRAQKK ER+ +LK FE+ ++ R QG NLY+KNLD + DDE+L Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGI-DDERL 310 Query: 1187 KELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQ 1366 ++ F+ FGTITS KVM + G +KG GFV F S E+AT+A+ MNG++V +KPLYVALAQ Sbjct: 311 RKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369 Query: 1367 RKEERRARLQAQFSQ 1411 RKEER+A L Q+ Q Sbjct: 370 RKEERQAHLTNQYMQ 384 Score = 177 bits (450), Expect = 1e-43 Identities = 106/297 (35%), Positives = 167/297 (56%), Gaps = 1/297 (0%) Frame = +2 Query: 524 DPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYEQ 700 +PS+ A++++ +L + LY+ FS G ILS +V +M + S GY +V ++Q Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61 Query: 701 DESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKE 880 A+ A++ +N ++ K V + +R+ N+++KNL +S L + Sbjct: 62 PADAERALDTMNFDVIKGKPVR----IMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117 Query: 881 LFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKK 1060 F FG I S VV D+ S+ +GFV+FE + A A+E +NG +D++++VGR + + Sbjct: 118 TFSAFGNILSCKVV-CDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176 Query: 1061 SEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD 1240 ERE +L A + TN+Y+KN G DDE+LKELF +FG S KVM D Sbjct: 177 KEREAEL----------GARAKEFTNVYIKNF-GEDMDDERLKELFGKFGPALSVKVMTD 225 Query: 1241 SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRARLQAQFSQ 1411 +G +KG GFV+F+ EDA +A+ MNGK + K +YV AQ+K ER+ L+ +F Q Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQ 282 Score = 78.2 bits (191), Expect = 1e-13 Identities = 34/68 (50%), Positives = 54/68 (79%) Frame = +2 Query: 1889 PPEQQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKSKVAEAMEV 2068 PP++Q+ MLGE L+PL+ + A K+TGMLLE+D +E+LH++ESP++L+SKV EA+ V Sbjct: 554 PPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAV 613 Query: 2069 LRSAQQQQ 2092 L++ Q ++ Sbjct: 614 LQAHQAKE 621
>P29341:PABP1_MOUSE Polyadenylate-binding protein 1 - Mus musculus (Mouse)| Length = 636 Score = 434 bits (1117), Expect = e-121 Identities = 221/375 (58%), Positives = 282/375 (75%), Gaps = 2/375 (0%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LYVGDL V +A L++ FS G ++S+RVCRD+ TR SLGYAYVNF PADA RAL+ + Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 NF + GKP+RIM+S RDPS RKSG NIFIKNLDKSIDNKALYDTFSAFGNILSCKV Sbjct: 73 NFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVC 132 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFG--SPKFN 826 + +G SKGYGFV +E E+A+ AI ++NGMLLND+KV+VG F ++ERE G + +F Sbjct: 133 DENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSQKEREAELGARAKEFT 191 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDL 1006 NVY+KN E ++ LKELFG FGP SV V+ + GKS+ FGFV+FE +DA AV+++ Sbjct: 192 NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 251 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 NGK+ + K++YVGRAQKK ER+ +LK FE+ ++ R QG NLY+KNLD + DDE+L Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGI-DDERL 310 Query: 1187 KELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQ 1366 ++ F+ FGTITS KVM + G +KG GFV F S E+AT+A+ MNG++V +KPLYVALAQ Sbjct: 311 RKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369 Query: 1367 RKEERRARLQAQFSQ 1411 RKEER+A L Q+ Q Sbjct: 370 RKEERQAHLTNQYMQ 384 Score = 177 bits (449), Expect = 2e-43 Identities = 106/297 (35%), Positives = 167/297 (56%), Gaps = 1/297 (0%) Frame = +2 Query: 524 DPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYEQ 700 +PS+ A++++ +L + LY+ FS G ILS +V +M + S GY +V ++Q Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61 Query: 701 DESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKE 880 A+ A++ +N ++ K V + +R+ N+++KNL +S L + Sbjct: 62 PADAERALDTMNFDVIKGKPVR----IMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117 Query: 881 LFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKK 1060 F FG I S VV D+ S+ +GFV+FE + A A+E +NG +D++++VGR + + Sbjct: 118 TFSAFGNILSCKVV-CDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSQ 176 Query: 1061 SEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD 1240 ERE +L A + TN+Y+KN G DDE+LKELF +FG S KVM D Sbjct: 177 KEREAEL----------GARAKEFTNVYIKNF-GEDMDDERLKELFGKFGPALSVKVMTD 225 Query: 1241 SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRARLQAQFSQ 1411 +G +KG GFV+F+ EDA +A+ MNGK + K +YV AQ+K ER+ L+ +F Q Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQ 282 Score = 78.2 bits (191), Expect = 1e-13 Identities = 34/68 (50%), Positives = 54/68 (79%) Frame = +2 Query: 1889 PPEQQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKSKVAEAMEV 2068 PP++Q+ MLGE L+PL+ + A K+TGMLLE+D +E+LH++ESP++L+SKV EA+ V Sbjct: 554 PPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAV 613 Query: 2069 LRSAQQQQ 2092 L++ Q ++ Sbjct: 614 LQAHQAKE 621
>P11940:PABP1_HUMAN Polyadenylate-binding protein 1 - Homo sapiens (Human)| Length = 636 Score = 434 bits (1115), Expect = e-120 Identities = 220/375 (58%), Positives = 282/375 (75%), Gaps = 2/375 (0%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LYVGDL V +A L++ FS G ++S+RVCRD+ TR SLGYAYVNF PADA RAL+ + Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 NF + GKP+RIM+S RDPS RKSG NIFIKNLDKSIDNKALYDTFSAFGNILSCKV Sbjct: 73 NFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVC 132 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFG--SPKFN 826 + +G SKGYGFV +E E+A+ AI ++NGMLLND+KV+VG F ++ERE G + +F Sbjct: 133 DENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFT 191 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDL 1006 NVY+KN E ++ LK+LFG FGP SV V+ + GKS+ FGFV+FE +DA AV+++ Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 251 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 NGK+ + K++YVGRAQKK ER+ +LK FE+ ++ R QG NLY+KNLD + DDE+L Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGI-DDERL 310 Query: 1187 KELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQ 1366 ++ F+ FGTITS KVM + G +KG GFV F S E+AT+A+ MNG++V +KPLYVALAQ Sbjct: 311 RKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369 Query: 1367 RKEERRARLQAQFSQ 1411 RKEER+A L Q+ Q Sbjct: 370 RKEERQAHLTNQYMQ 384 Score = 176 bits (447), Expect = 3e-43 Identities = 105/297 (35%), Positives = 167/297 (56%), Gaps = 1/297 (0%) Frame = +2 Query: 524 DPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYEQ 700 +PS+ A++++ +L + LY+ FS G ILS +V +M + S GY +V ++Q Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61 Query: 701 DESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKE 880 A+ A++ +N ++ K V + +R+ N+++KNL +S L + Sbjct: 62 PADAERALDTMNFDVIKGKPVR----IMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117 Query: 881 LFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKK 1060 F FG I S VV D+ S+ +GFV+FE + A A+E +NG +D++++VGR + + Sbjct: 118 TFSAFGNILSCKVV-CDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176 Query: 1061 SEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD 1240 ERE +L A + TN+Y+KN G DDE+LK+LF +FG S KVM D Sbjct: 177 KEREAEL----------GARAKEFTNVYIKNF-GEDMDDERLKDLFGKFGPALSVKVMTD 225 Query: 1241 SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRARLQAQFSQ 1411 +G +KG GFV+F+ EDA +A+ MNGK + K +YV AQ+K ER+ L+ +F Q Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQ 282 Score = 77.8 bits (190), Expect = 2e-13 Identities = 34/68 (50%), Positives = 54/68 (79%) Frame = +2 Query: 1889 PPEQQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKSKVAEAMEV 2068 PP++Q+ MLGE L+PL+ + A K+TGMLLE+D +E+LH++ESP++L+SKV EA+ V Sbjct: 554 PPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAV 613 Query: 2069 LRSAQQQQ 2092 L++ Q ++ Sbjct: 614 LQAHQAKE 621
>P61286:PABP1_BOVIN Polyadenylate-binding protein 1 - Bos taurus (Bovine)| Length = 636 Score = 434 bits (1115), Expect = e-120 Identities = 220/375 (58%), Positives = 282/375 (75%), Gaps = 2/375 (0%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LYVGDL V +A L++ FS G ++S+RVCRD+ TR SLGYAYVNF PADA RAL+ + Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 NF + GKP+RIM+S RDPS RKSG NIFIKNLDKSIDNKALYDTFSAFGNILSCKV Sbjct: 73 NFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVC 132 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFG--SPKFN 826 + +G SKGYGFV +E E+A+ AI ++NGMLLND+KV+VG F ++ERE G + +F Sbjct: 133 DENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFT 191 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDL 1006 NVY+KN E ++ LK+LFG FGP SV V+ + GKS+ FGFV+FE +DA AV+++ Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 251 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 NGK+ + K++YVGRAQKK ER+ +LK FE+ ++ R QG NLY+KNLD + DDE+L Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGI-DDERL 310 Query: 1187 KELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQ 1366 ++ F+ FGTITS KVM + G +KG GFV F S E+AT+A+ MNG++V +KPLYVALAQ Sbjct: 311 RKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369 Query: 1367 RKEERRARLQAQFSQ 1411 RKEER+A L Q+ Q Sbjct: 370 RKEERQAHLTNQYMQ 384 Score = 176 bits (447), Expect = 3e-43 Identities = 105/297 (35%), Positives = 167/297 (56%), Gaps = 1/297 (0%) Frame = +2 Query: 524 DPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYEQ 700 +PS+ A++++ +L + LY+ FS G ILS +V +M + S GY +V ++Q Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61 Query: 701 DESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKE 880 A+ A++ +N ++ K V + +R+ N+++KNL +S L + Sbjct: 62 PADAERALDTMNFDVIKGKPVR----IMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117 Query: 881 LFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKK 1060 F FG I S VV D+ S+ +GFV+FE + A A+E +NG +D++++VGR + + Sbjct: 118 TFSAFGNILSCKVV-CDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176 Query: 1061 SEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD 1240 ERE +L A + TN+Y+KN G DDE+LK+LF +FG S KVM D Sbjct: 177 KEREAEL----------GARAKEFTNVYIKNF-GEDMDDERLKDLFGKFGPALSVKVMTD 225 Query: 1241 SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRARLQAQFSQ 1411 +G +KG GFV+F+ EDA +A+ MNGK + K +YV AQ+K ER+ L+ +F Q Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQ 282 Score = 77.8 bits (190), Expect = 2e-13 Identities = 34/68 (50%), Positives = 54/68 (79%) Frame = +2 Query: 1889 PPEQQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKSKVAEAMEV 2068 PP++Q+ MLGE L+PL+ + A K+TGMLLE+D +E+LH++ESP++L+SKV EA+ V Sbjct: 554 PPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAV 613 Query: 2069 LRSAQQQQ 2092 L++ Q ++ Sbjct: 614 LQAHQAKE 621
>Q5R8F7:PABP1_PONPY Polyadenylate-binding protein 1 - Pongo pygmaeus (Orangutan)| Length = 636 Score = 432 bits (1111), Expect = e-120 Identities = 219/375 (58%), Positives = 281/375 (74%), Gaps = 2/375 (0%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LYVGDL +A L++ FS G ++S+RVCRD+ TR SLGYAYVNF PADA RAL+ + Sbjct: 13 LYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 NF + GKP+RIM+S RDPS RKSG NIFIKNLDKSIDNKALYDTFSAFGNILSCKV Sbjct: 73 NFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVC 132 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFG--SPKFN 826 + +G SKGYGFV +E E+A+ AI ++NGMLLND+KV+VG F ++ERE G + +F Sbjct: 133 DENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFT 191 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDL 1006 NVY+KN E ++ LK+LFG FGP SV V+ + GKS+ FGFV+FE +DA AV+++ Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 251 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 NGK+ + K++YVGRAQKK ER+ +LK FE+ ++ R QG NLY+KNLD + DDE+L Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGI-DDERL 310 Query: 1187 KELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQ 1366 ++ F+ FGTITS KVM + G +KG GFV F S E+AT+A+ MNG++V +KPLYVALAQ Sbjct: 311 RKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369 Query: 1367 RKEERRARLQAQFSQ 1411 RKEER+A L Q+ Q Sbjct: 370 RKEERQAHLTNQYMQ 384 Score = 175 bits (443), Expect = 9e-43 Identities = 105/297 (35%), Positives = 166/297 (55%), Gaps = 1/297 (0%) Frame = +2 Query: 524 DPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYEQ 700 +PS+ A++++ +L LY+ FS G ILS +V +M + S GY +V ++Q Sbjct: 2 NPSAPSYPMASLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61 Query: 701 DESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKE 880 A+ A++ +N ++ K V + +R+ N+++KNL +S L + Sbjct: 62 PADAERALDTMNFDVIKGKPVR----IMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117 Query: 881 LFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKK 1060 F FG I S VV D+ S+ +GFV+FE + A A+E +NG +D++++VGR + + Sbjct: 118 TFSAFGNILSCKVV-CDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 176 Query: 1061 SEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD 1240 ERE +L A + TN+Y+KN G DDE+LK+LF +FG S KVM D Sbjct: 177 KEREAEL----------GARAKEFTNVYIKNF-GEDMDDERLKDLFGKFGPALSVKVMTD 225 Query: 1241 SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRARLQAQFSQ 1411 +G +KG GFV+F+ EDA +A+ MNGK + K +YV AQ+K ER+ L+ +F Q Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQ 282 Score = 77.8 bits (190), Expect = 2e-13 Identities = 34/68 (50%), Positives = 54/68 (79%) Frame = +2 Query: 1889 PPEQQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKSKVAEAMEV 2068 PP++Q+ MLGE L+PL+ + A K+TGMLLE+D +E+LH++ESP++L+SKV EA+ V Sbjct: 554 PPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAV 613 Query: 2069 LRSAQQQQ 2092 L++ Q ++ Sbjct: 614 LQAHQAKE 621
>Q13310:PABP4_HUMAN Polyadenylate-binding protein 4 - Homo sapiens (Human)| Length = 644 Score = 430 bits (1106), Expect = e-119 Identities = 222/375 (59%), Positives = 281/375 (74%), Gaps = 2/375 (0%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LYVGDL V +A L++ FS G V+S+RVCRD+ TR SLGYAYVNF PADA RAL+ + Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 NF + GKPIRIM+S RDPS RKSG N+FIKNLDKSIDNKALYDTFSAFGNILSCKV Sbjct: 73 NFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVC 132 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFG--SPKFN 826 + +G SKGY FV +E E+A AI ++NGMLLND+KV+VG F ++ERE G + +F Sbjct: 133 DENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFT 191 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDL 1006 NVY+KN E +++LKELF FG SV V+R +GKS+ FGFV++E +DA AVE++ Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 NGK+ K ++VGRAQKK ER+ +LK FE+ +E R QG NLY+KNLD ++ DDEKL Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTI-DDEKL 310 Query: 1187 KELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQ 1366 ++ F+ FG+ITS KVM + +G +KG GFV F S E+AT+A+ MNG++VGSKPLYVALAQ Sbjct: 311 RKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369 Query: 1367 RKEERRARLQAQFSQ 1411 RKEER+A L Q+ Q Sbjct: 370 RKEERKAHLTNQYMQ 384 Score = 92.4 bits (228), Expect = 7e-18 Identities = 63/193 (32%), Positives = 104/193 (53%), Gaps = 1/193 (0%) Frame = +2 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHAVED 1003 ++YV +L TE L E F GP+ S+ V R +S + +VNF+ P DA A++ Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71 Query: 1004 LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEK 1183 +N K + + S+R+ L++S N+++KNLD S+ D++ Sbjct: 72 MNFDVIKGKPIRI----MWSQRDPSLRKS------------GVGNVFIKNLDKSI-DNKA 114 Query: 1184 LKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALA 1363 L + F+ FG I SCKV+ D NG +KG FV F++ E A +A+ MNG ++ + ++V Sbjct: 115 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRF 173 Query: 1364 QRKEERRARLQAQ 1402 + ++ER A L A+ Sbjct: 174 KSRKEREAELGAK 186 Score = 77.0 bits (188), Expect = 3e-13 Identities = 33/63 (52%), Positives = 52/63 (82%) Frame = +2 Query: 1889 PPEQQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKSKVAEAMEV 2068 PP++Q+ MLGE L+PL+ + + A K+TGMLLE+D +E+LH++ESP++L+SKV EA+ V Sbjct: 563 PPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAV 622 Query: 2069 LRS 2077 L++ Sbjct: 623 LQA 625
>P20965:PABPA_XENLA Polyadenylate-binding protein 1-A - Xenopus laevis (African clawed| frog) Length = 633 Score = 429 bits (1104), Expect = e-119 Identities = 217/375 (57%), Positives = 281/375 (74%), Gaps = 2/375 (0%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LYVGDL V +A L++ FS G ++S+RVCRD+ TR SLGYAYVNF PADA RAL+ + Sbjct: 13 LYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 NF + G+P+RIM+S RDPS RKSG NIFIKNLDKSIDNKALYDTFSAFGNILSCKV Sbjct: 73 NFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVC 132 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFG--SPKFN 826 + +G SKGYGFV +E E+A+ AI+++NGMLLND+KV+VG F ++ERE G + +F Sbjct: 133 DENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFT 191 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDL 1006 NVY+KN + ++ LKE+FG +GP SV V+ D+GKS+ FGFV+FE +DA AV+++ Sbjct: 192 NVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDEM 251 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 NGK + K ++VGRAQKK ER+ +LK FE+ ++ R QG NLY+KNLD + DDE+L Sbjct: 252 NGKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGI-DDERL 310 Query: 1187 KELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQ 1366 ++ F FGTITS KVM + G +KG GFV F S E+AT+A+ MNG++V +KPLYVALAQ Sbjct: 311 RKEFLPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369 Query: 1367 RKEERRARLQAQFSQ 1411 RKEER+A L Q+ Q Sbjct: 370 RKEERQAHLTNQYMQ 384 Score = 172 bits (436), Expect = 6e-42 Identities = 101/297 (34%), Positives = 168/297 (56%), Gaps = 1/297 (0%) Frame = +2 Query: 524 DPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYEQ 700 +PS+ A++++ +L + + LY+ FS G ILS +V +M + S GY +V ++Q Sbjct: 2 NPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61 Query: 701 DESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKE 880 A+ A++ +N ++ + V + +R+ N+++KNL +S L + Sbjct: 62 PADAERALDTMNFDVIKGRPVR----IMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117 Query: 881 LFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKK 1060 F FG I S VV D+ S+ +GFV+FE + A A++ +NG +D++++VGR + + Sbjct: 118 TFSAFGNILSCKVV-CDENGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSR 176 Query: 1061 SEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD 1240 ERE +L A + TN+Y+KN G +DE+LKE+F ++G S KVM D Sbjct: 177 KEREAEL----------GARAKEFTNVYIKNF-GDDMNDERLKEMFGKYGPALSVKVMTD 225 Query: 1241 SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRARLQAQFSQ 1411 NG +KG GFV+F+ EDA +A+ MNGK + K ++V AQ+K ER+ L+ +F Q Sbjct: 226 DNGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVERQTELKRKFEQ 282 Score = 77.8 bits (190), Expect = 2e-13 Identities = 34/68 (50%), Positives = 54/68 (79%) Frame = +2 Query: 1889 PPEQQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKSKVAEAMEV 2068 PP++Q+ MLGE L+PL+ + A K+TGMLLE+D +E+LH++ESP++L+SKV EA+ V Sbjct: 552 PPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAV 611 Query: 2069 LRSAQQQQ 2092 L++ Q ++ Sbjct: 612 LQAHQAKE 619
>Q6IP09:PABPB_XENLA Polyadenylate-binding protein 1-B - Xenopus laevis (African clawed| frog) Length = 633 Score = 427 bits (1098), Expect = e-118 Identities = 219/375 (58%), Positives = 278/375 (74%), Gaps = 2/375 (0%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LYVGDL V +A L++ FS G ++S+RVCRD+ TR SLGYAYVNF PADA RAL+ + Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 NF + GKP+RIM+S RDPS RKSG NIFIKNLDKSIDNKALYDTFSAFGNILSCKV Sbjct: 73 NFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVC 132 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFG--SPKFN 826 + +G SKGYGFV +E E+A+ AI+++NGMLLND+KV+VG F ++ERE G + +F Sbjct: 133 DENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFT 191 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDL 1006 NVY+KN E ++ LKE FG +G SV V+ D GKSR FGFV+FE +DA AV+D+ Sbjct: 192 NVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDHGKSRGFGFVSFERHEDAQKAVDDM 251 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 NGK + K ++VGRAQKK ER+ +LK FE+ ++ R QG NLY+KNLD + DDE+L Sbjct: 252 NGKDLNGKAIFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGI-DDERL 310 Query: 1187 KELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQ 1366 ++ F FG+ITS KVM + G +KG GFV F S E+AT+A+ MNG++V +KPLYVALAQ Sbjct: 311 RKEFTPFGSITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369 Query: 1367 RKEERRARLQAQFSQ 1411 RKEER+A L Q+ Q Sbjct: 370 RKEERQAHLTNQYMQ 384 Score = 170 bits (431), Expect = 2e-41 Identities = 101/297 (34%), Positives = 166/297 (55%), Gaps = 1/297 (0%) Frame = +2 Query: 524 DPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYEQ 700 +PS+ A++++ +L + LY+ FS G ILS +V +M + S GY +V ++Q Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61 Query: 701 DESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKE 880 A+ A++ +N ++ K V + +R+ N+++KNL +S L + Sbjct: 62 PADAERALDTMNFDVIKGKPVR----IMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 117 Query: 881 LFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKK 1060 F FG I S VV D+ S+ +GFV+FE + A A++ +NG +D++++VGR + + Sbjct: 118 TFSAFGNILSCKVV-CDENGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSR 176 Query: 1061 SEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD 1240 ERE +L A + TN+Y+KN G DDE+LKE F ++G S KVM D Sbjct: 177 KEREAEL----------GARAKEFTNVYIKNF-GEDMDDERLKEWFGQYGAALSVKVMTD 225 Query: 1241 SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRARLQAQFSQ 1411 +G ++G GFV+F+ EDA +A+ MNGK + K ++V AQ+K ER+ L+ +F Q Sbjct: 226 DHGKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAIFVGRAQKKVERQTELKRKFEQ 282 Score = 77.8 bits (190), Expect = 2e-13 Identities = 34/68 (50%), Positives = 54/68 (79%) Frame = +2 Query: 1889 PPEQQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKSKVAEAMEV 2068 PP++Q+ MLGE L+PL+ + A K+TGMLLE+D +E+LH++ESP++L+SKV EA+ V Sbjct: 552 PPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAV 611 Query: 2069 LRSAQQQQ 2092 L++ Q ++ Sbjct: 612 LQAHQAKE 619
>P21187:PABP_DROME Polyadenylate-binding protein - Drosophila melanogaster (Fruit fly)| Length = 634 Score = 420 bits (1080), Expect = e-116 Identities = 216/374 (57%), Positives = 275/374 (73%), Gaps = 3/374 (0%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LYVGDL V ++ LFD FS G V+S+RVCRDV TR SLGYAYVNF PADA RAL+ + Sbjct: 4 LYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDTM 63 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 NF V KPIRIM+S RDPS R+SG N+FIKNLD++IDNKA+YDTFSAFGNILSCKVAT Sbjct: 64 NFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVAT 123 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFG--SPKFN 826 + G SKGYGFV +E +E+A +I+++NGMLLN KKVYVG F+ ++ERE G + F Sbjct: 124 DEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFT 183 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDL 1006 NVYVKN +E ++ LKE F +G ITS V+ +DGKS+ FGFV FE + A AV+ L Sbjct: 184 NVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQAL 243 Query: 1007 NGKKF-DDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEK 1183 NGK + K LYV RAQKK+ER+ +LK FE+ ++ + G NLY+KNLD ++DDD + Sbjct: 244 NGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDD-R 302 Query: 1184 LKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALA 1363 L+ F+ +G ITS KVM D G +KG GFV F ++ +AT A+ +NG++VGSKPLYVALA Sbjct: 303 LRIAFSPYGNITSAKVMTDEEGRSKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALA 362 Query: 1364 QRKEERRARLQAQF 1405 QRKEER+A L +Q+ Sbjct: 363 QRKEERKAHLASQY 376 Score = 165 bits (418), Expect = 7e-40 Identities = 99/289 (34%), Positives = 164/289 (56%), Gaps = 2/289 (0%) Frame = +2 Query: 551 ANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYEQDESAQNAIN 727 A++++ +L + ++ L+D FS+ G +LS +V ++ + S GY +V ++Q A+ A++ Sbjct: 2 ASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD 61 Query: 728 ELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPIT 907 +N L+ +K + + +R+ NV++KNL + + + F FG I Sbjct: 62 TMNFDLVRNKPIRI----MWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNIL 117 Query: 908 SVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKE 1087 S V + G S+ +GFV+FE + A +++ +NG + K++YVG+ + ERE +L E Sbjct: 118 SCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGE 177 Query: 1088 SFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSG 1267 + TN+Y+KN DD EKLKE F +G ITS KVM +G +KG G Sbjct: 178 KAKLF----------TNVYVKNFTEDFDD-EKLKEFFEPYGKITSYKVMSKEDGKSKGFG 226 Query: 1268 FVAFKSSEDATRALVAMNGKMVGS-KPLYVALAQRKEERRARLQAQFSQ 1411 FVAF+++E A A+ A+NGK +G K LYVA AQ+K ER+ L+ +F + Sbjct: 227 FVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQELKRKFEE 275 Score = 70.1 bits (170), Expect = 4e-11 Identities = 30/61 (49%), Positives = 49/61 (80%) Frame = +2 Query: 1892 PEQQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKSKVAEAMEVL 2071 P++Q+ +LGE LYP+++ + + A K+TGMLLE++ +E+LH+IE +ALK+KV EA+ VL Sbjct: 565 PQEQKQILGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKAKVEEAVAVL 624 Query: 2072 R 2074 + Sbjct: 625 Q 625
>Q4VXU2:PAP1L_HUMAN Polyadenylate-binding protein 1-like - Homo sapiens (Human)| Length = 614 Score = 417 bits (1071), Expect = e-115 Identities = 216/375 (57%), Positives = 274/375 (73%), Gaps = 2/375 (0%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LYVGDL V +A L++ FS G ++S+RVCRDV TR SLGYAY+NF PADA RAL+ + Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 NF + G+PIRIM+S RDP RKSG NIFIKNL+ SIDNKALYDTFS FGNILSCKVA Sbjct: 73 NFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVAC 132 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSP--KFN 826 + G S+G+GFV +E E+AQ AIN +NGMLLND+KV+VG F ++ERE G+ +F Sbjct: 133 DEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFT 191 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDL 1006 N+YVKNL E L++LF FG + SV V+R + G SRCFGFVNFE ++A AV + Sbjct: 192 NIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHM 251 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 NGK+ + LY GRAQK+ ER+ +LK FE+ ++ R QG NLY+KNLD S+DDD KL Sbjct: 252 NGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDD-KL 310 Query: 1187 KELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQ 1366 ++ F+ +G ITS KVM + G +KG GFV F S E+AT+A+ MNG++VG+KPLYVALAQ Sbjct: 311 RKEFSPYGVITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369 Query: 1367 RKEERRARLQAQFSQ 1411 RKEER+A L Q+ Q Sbjct: 370 RKEERKAILTNQYMQ 384 Score = 158 bits (400), Expect = 8e-38 Identities = 95/288 (32%), Positives = 162/288 (56%), Gaps = 1/288 (0%) Frame = +2 Query: 551 ANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYEQDESAQNAIN 727 A++++ +L + LY+ FS G ILS +V ++ + S GY ++ ++Q A+ A++ Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70 Query: 728 ELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPIT 907 +N +L + + + +R+ N+++KNL +S L + F FG I Sbjct: 71 TMNFEMLKGQPIR----IMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNIL 126 Query: 908 SVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKE 1087 S V D+ SR FGFV+FE + A A+ +NG +D++++VG + + ERE +L Sbjct: 127 S-CKVACDEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAEL-- 183 Query: 1088 SFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSG 1267 A + TN+Y+KNL V D++ L++LF++FG + S KVMRD++G ++ G Sbjct: 184 --------GARALEFTNIYVKNLPVDV-DEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFG 234 Query: 1268 FVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRARLQAQFSQ 1411 FV F+ E+A +A+V MNGK V + LY AQ++ ER+ L+ +F Q Sbjct: 235 FVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQ 282 Score = 66.6 bits (161), Expect = 4e-10 Identities = 30/68 (44%), Positives = 49/68 (72%) Frame = +2 Query: 1889 PPEQQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKSKVAEAMEV 2068 P +Q+ M+GE LYPL+ + A K+TGMLLE+D +E+L ++ESP++L +K+ EA+ V Sbjct: 540 PLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKIDEAVAV 599 Query: 2069 LRSAQQQQ 2092 L++ Q + Sbjct: 600 LQAHQAME 607
>Q6DEY7:EPAB_XENTR Embryonic polyadenylate-binding protein - Xenopus tropicalis (Western| clawed frog) (Silurana tropicalis) Length = 629 Score = 413 bits (1062), Expect = e-114 Identities = 210/375 (56%), Positives = 275/375 (73%), Gaps = 2/375 (0%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LYVGDL V +A L++ FS G ++S+RVCRD+ TR SLGYAY+NF PADA RAL+ + Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDTM 72 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 NF + G+PIRIM+S RDP RKSG N+FIKNLD+SIDNKALYDTFSAFGNILSCKV Sbjct: 73 NFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVC 132 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSP--KFN 826 + G S+GYGFV +E E+A AI +NGMLLND+KV+VG F ++ERE +G+ +F Sbjct: 133 DEHG-SRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFT 191 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDL 1006 NVY+KN E + L+E+F FG SV V+ D G+SR FGFVN+ N ++A AV ++ Sbjct: 192 NVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDTGRSRGFGFVNYGNHEEAQKAVSEM 251 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 NGK+ + + +YVGRAQK+ ER+ +LK FE+ +E +R QG NLY+KNLD +DDD +L Sbjct: 252 NGKEVNGRMIYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDD-RL 310 Query: 1187 KELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQ 1366 ++ F+ +GTITS KVM + G +KG GFV F S E+AT+A+ MNG++V +KPLYVALAQ Sbjct: 311 RKEFSPYGTITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQ 369 Query: 1367 RKEERRARLQAQFSQ 1411 RKEER+A L Q+ Q Sbjct: 370 RKEERKAILTNQYMQ 384 Score = 87.8 bits (216), Expect = 2e-16 Identities = 60/193 (31%), Positives = 103/193 (53%), Gaps = 1/193 (0%) Frame = +2 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHAVED 1003 ++YV +L TE L E F GPI S+ V R +S + ++NF+ P DA A++ Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDT 71 Query: 1004 LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEK 1183 +N + + + + S+R+ L++S N+++KNLD S+ D++ Sbjct: 72 MNFEVIKGRPIRI----MWSQRDPGLRKS------------GVGNVFIKNLDESI-DNKA 114 Query: 1184 LKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALA 1363 L + F+ FG I SCKV+ D +G ++G GFV F++ E A RA+ MNG ++ + ++V Sbjct: 115 LYDTFSAFGNILSCKVVCDEHG-SRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHF 173 Query: 1364 QRKEERRARLQAQ 1402 + + ER A+ Sbjct: 174 KSRRERELEYGAK 186 Score = 80.1 bits (196), Expect = 4e-14 Identities = 36/75 (48%), Positives = 57/75 (76%) Frame = +2 Query: 1889 PPEQQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKSKVAEAMEV 2068 PP++Q+ MLGE LYPL+ ++ A K+TGMLLE+D +E+LH++ESP++L SKV EA+ V Sbjct: 551 PPQEQKQMLGERLYPLIHEMHPTLAGKITGMLLEIDNSELLHMLESPESLHSKVEEAVAV 610 Query: 2069 LRSAQQQQTNVPADQ 2113 L++ Q ++ + + Q Sbjct: 611 LQAHQAKENSQKSAQ 625
>P31209:PABP_SCHPO Polyadenylate-binding protein - Schizosaccharomyces pombe (Fission| yeast) Length = 653 Score = 411 bits (1056), Expect = e-114 Identities = 223/449 (49%), Positives = 289/449 (64%), Gaps = 13/449 (2%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LYVG+LD SV +A LF++F+ +G V S+RVCRD TR SLGYAYVNF + D +AL+ L Sbjct: 82 LYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKALDEL 141 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 N+T + G+P RIM+S RDPS RK G N+FIKNLD +IDNKAL+DTFSAFG ILSCKVA Sbjct: 142 NYTLIKGRPCRIMWSQRDPSLRKMGTGNVFIKNLDPAIDNKALHDTFSAFGKILSCKVAV 201 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPK--FN 826 + G +KGYGFV ++ ESA AI +NGMLLNDKKVYVG V ++ER++ + K F Sbjct: 202 DELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKKVYVGHHVSRRERQSKVEALKANFT 261 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDL 1006 NVY+KNL TE +LFG FG ITS+ +V+ + K R FGFVN+ N + A AV++L Sbjct: 262 NVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDKPRGFGFVNYANHECAQKAVDEL 321 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 N K++ K+LYVGRAQKK ERE +L++ +E+ E ++ QG NL++KNL V DDE+L Sbjct: 322 NDKEYKGKKLYVGRAQKKHEREEELRKRYEQMKLEKMNKYQGVNLFIKNLQDEV-DDERL 380 Query: 1187 KELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQ 1366 K F+ FGTITS K+M D G +KG GFV + + E+A +A+ MN +M+ KPLYVALAQ Sbjct: 381 KAEFSAFGTITSAKIMTDEQGKSKGFGFVCYTTPEEANKAVTEMNQRMLAGKPLYVALAQ 440 Query: 1367 RKEERRARLQAQFSQXXXXXXXXXXXXXXXXXXXXXXXXQQLFY---GQPPPAFVNPQ-- 1531 RKE RR++L+AQ L Y G P PA VN + Sbjct: 441 RKEVRRSQLEAQIQARNQFRLQQQVAAAAGIPAVQYGATGPLIYGPGGYPIPAAVNGRGM 500 Query: 1532 ---PGYGFQQHMIPGMR---PGVAPMPNF 1600 PG+ M PGM P P P + Sbjct: 501 PMVPGHNGPMPMYPGMPTQFPAGGPAPGY 529 Score = 97.8 bits (242), Expect = 2e-19 Identities = 68/198 (34%), Positives = 105/198 (53%), Gaps = 2/198 (1%) Frame = +2 Query: 812 SPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAV 988 +P ++YV L S TE L ELF + GP+ S+ V R A +S + +VNF N +D Sbjct: 76 APTSASLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGE 135 Query: 989 HAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGT-NLYLKNLDGS 1165 A+++LN L GR + S ++ + R GT N+++KNLD + Sbjct: 136 KALDELN------YTLIKGRPCR-----------IMWSQRDPSLRKMGTGNVFIKNLDPA 178 Query: 1166 VDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKP 1345 + D++ L + F+ FG I SCKV D G KG GFV F S E A A+ +NG ++ K Sbjct: 179 I-DNKALHDTFSAFGKILSCKVAVDELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKK 237 Query: 1346 LYVALAQRKEERRARLQA 1399 +YV + ER+++++A Sbjct: 238 VYVGHHVSRRERQSKVEA 255 Score = 57.0 bits (136), Expect = 3e-07 Identities = 30/68 (44%), Positives = 42/68 (61%) Frame = +2 Query: 1889 PPEQQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKSKVAEAMEV 2068 P E ++ +LGE LYP V E + K+TGMLLEM +E+L L+E AL +V EA+ V Sbjct: 581 PEESRKQVLGELLYPKVFVREEKLSGKITGMLLEMPNSELLELLEDDSALNERVNEAIGV 640 Query: 2069 LRSAQQQQ 2092 L+ Q+ Sbjct: 641 LQEFVDQE 648
>Q98SP8:EPABA_XENLA Embryonic polyadenylate-binding protein-A - Xenopus laevis (African| clawed frog) Length = 629 Score = 411 bits (1056), Expect = e-114 Identities = 218/437 (49%), Positives = 286/437 (65%), Gaps = 9/437 (2%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LY+GDL V +A L++ FS G ++S+RVCRD+ TR SL YAY+NF PADA RAL+ + Sbjct: 13 LYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERALDTM 72 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 NF + G+PIRIM+S RDP RKSG N+FIKNLD+SIDNKALYDTFSAFGNILSCKV Sbjct: 73 NFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVC 132 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSP--KFN 826 + G S+GYGFV +E E+A AI +NGMLLND+KV+VG F ++ERE +G+ +F Sbjct: 133 DEHG-SRGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFT 191 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDL 1006 NVY+KN E + L+E+F FG SV V+ D G+SR FGFVN+ N ++A AV ++ Sbjct: 192 NVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDSGRSRGFGFVNYGNHEEAQKAVSEM 251 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 NGK+ + + +YVGRAQK+ ER+ +LK FE+ +E +R QG NLY+KNLD +DDD +L Sbjct: 252 NGKEVNGRMIYVGRAQKRIERQSELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDD-RL 310 Query: 1187 KELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQ 1366 ++ F +GTITS KVM + G +KG GFV F S E+AT+A+ MNG++V +KPLYVALAQ Sbjct: 311 RKEFLPYGTITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQ 369 Query: 1367 RKEERRARLQAQFSQXXXXXXXXXXXXXXXXXXXXXXXXQQL-------FYGQPPPAFVN 1525 RKEER+A L Q+ Q + FY P A V Sbjct: 370 RKEERKAILTNQYMQRLATMRAMPGPLLGSFQQPANYFLSAMPQPPNRTFYSPNPVAPVR 429 Query: 1526 PQPGYGFQQHMIPGMRP 1576 P P + Q P +P Sbjct: 430 PAPQWASHQSRPPQYQP 446 Score = 77.4 bits (189), Expect = 2e-13 Identities = 33/68 (48%), Positives = 54/68 (79%) Frame = +2 Query: 1889 PPEQQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKSKVAEAMEV 2068 PP++Q+ MLGE +YP++ ++ A K+TGMLLE+D +E+LH++ESP++L SKV EA+ V Sbjct: 551 PPQEQKQMLGERIYPVIHEMHPTLAGKITGMLLEIDNSELLHMLESPESLHSKVEEAVAV 610 Query: 2069 LRSAQQQQ 2092 L++ Q ++ Sbjct: 611 LQAHQAKE 618
>Q6GR16:EPABB_XENLA Embryonic polyadenylate-binding protein-B - Xenopus laevis (African| clawed frog) Length = 629 Score = 408 bits (1049), Expect = e-113 Identities = 208/375 (55%), Positives = 274/375 (73%), Gaps = 2/375 (0%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LY+GDL V +A L++ FS G ++S+RVCRD+ TR SLGYAY+NF PADA RAL+ + Sbjct: 13 LYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDTM 72 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 NF + G+PIRIM+S RDP RKSG N+FIKNLD SIDNKALYDTFSAFG+ILSCKV Sbjct: 73 NFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGDILSCKVVC 132 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSP--KFN 826 + G S+GYGFV +E E+A AI +NGMLLND+KV+VG F ++ERE +G+ +F Sbjct: 133 DEYG-SRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFT 191 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDL 1006 NVY+KN E + LKE+F FG SV V+ + G+SR FGFVN+ N ++A AV ++ Sbjct: 192 NVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDNSGRSRGFGFVNYGNHEEAQKAVTEM 251 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 NGK+ + + +YVGRAQK+ ER+ +LK FE+ +E +R QG NLY+KNLD +DDD +L Sbjct: 252 NGKEVNGRMVYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDD-RL 310 Query: 1187 KELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQ 1366 ++ F+ +GTITS KVM + G +KG GFV F S E+AT+A+ MNG++V +KPLYVALAQ Sbjct: 311 RKEFSPYGTITSTKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQ 369 Query: 1367 RKEERRARLQAQFSQ 1411 RKEER+A L Q+ Q Sbjct: 370 RKEERKAILTNQYMQ 384 Score = 73.6 bits (179), Expect = 4e-12 Identities = 32/69 (46%), Positives = 54/69 (78%) Frame = +2 Query: 1889 PPEQQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKSKVAEAMEV 2068 P ++Q+ +LGE +YPL+ ++ A K+TGMLLE+D +E+LH++ESP++L SKV EA+ V Sbjct: 551 PLQEQKQILGERIYPLIHEMHPTLAGKITGMLLEIDNSELLHMLESPESLHSKVEEAVAV 610 Query: 2069 LRSAQQQQT 2095 L++ Q +++ Sbjct: 611 LQAHQAKES 619
>Q9H361:PABP3_HUMAN Polyadenylate-binding protein 3 - Homo sapiens (Human)| Length = 631 Score = 404 bits (1037), Expect = e-111 Identities = 206/375 (54%), Positives = 273/375 (72%), Gaps = 2/375 (0%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LYVGDL V +A L++ FS G ++S+R+CRD+ T S YAYVNF DA AL+ + Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDTM 72 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 NF + GKP+RIM+S RDPS RKSG NIF+KNLDKSI+NKALYDT SAFGNILSC V Sbjct: 73 NFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVC 132 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFG--SPKFN 826 + +G SKGYGFV +E E+A+ AI ++NGMLLN +KV+VG F ++ERE G + +F Sbjct: 133 DENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFP 191 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDL 1006 NVY+KN E ++ LK+LFG FGP SV V+ + GKS+ FGFV+FE +DA AV+++ Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 251 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 NGK+ + K++YVGRAQKK ER+ +LK +FE+ ++ R Q NLY+KNLD + DDE+L Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGI-DDERL 310 Query: 1187 KELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQ 1366 ++ F+ FGTITS KVM + G +KG GFV F S E+AT+A+ MNG++V +KPLYVALAQ Sbjct: 311 RKAFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369 Query: 1367 RKEERRARLQAQFSQ 1411 RKEER+A L ++ Q Sbjct: 370 RKEERQAYLTNEYMQ 384 Score = 162 bits (409), Expect = 8e-39 Identities = 97/297 (32%), Positives = 163/297 (54%), Gaps = 1/297 (0%) Frame = +2 Query: 524 DPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYEQ 700 +PS+ A++++ +L + LY+ FS G ILS ++ ++ + S Y +V ++ Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQH 61 Query: 701 DESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKE 880 + A++A++ +N ++ K V + +R+ N++VKNL +S L + Sbjct: 62 TKDAEHALDTMNFDVIKGKPVR----IMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYD 117 Query: 881 LFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKK 1060 FG I S VV D+ S+ +GFV+FE + A A++ +NG + ++++VG+ + + Sbjct: 118 TVSAFGNILSCNVV-CDENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSR 176 Query: 1061 SEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD 1240 ERE +L A + N+Y+KN G DDE+LK+LF +FG S KVM D Sbjct: 177 KEREAEL----------GARAKEFPNVYIKNF-GEDMDDERLKDLFGKFGPALSVKVMTD 225 Query: 1241 SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRARLQAQFSQ 1411 +G +KG GFV+F+ EDA +A+ MNGK + K +YV AQ+K ER+ L+ F Q Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQ 282 Score = 75.5 bits (184), Expect = 9e-13 Identities = 34/73 (46%), Positives = 55/73 (75%) Frame = +2 Query: 1889 PPEQQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKSKVAEAMEV 2068 PP++Q+ MLGE L+PL+ + A K+TGMLLE+D +E+L+++ESP++L+SKV EA+ V Sbjct: 549 PPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESLRSKVDEAVAV 608 Query: 2069 LRSAQQQQTNVPA 2107 L++ Q ++ A Sbjct: 609 LQAHQAKEATQKA 621
>P04147:PABP_YEAST Polyadenylate-binding protein, cytoplasmic and nuclear -| Saccharomyces cerevisiae (Baker's yeast) Length = 577 Score = 401 bits (1031), Expect = e-111 Identities = 202/372 (54%), Positives = 272/372 (73%), Gaps = 2/372 (0%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LYVGDL+ SV +A L+D+FS +GSV S+RVCRD T+ SLGYAYVNF+ +A+E L Sbjct: 40 LYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQL 99 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 N+TP+ G+ RIM+S RDPS RK G+ NIFIKNL IDNKALYDTFS FG+ILS K+AT Sbjct: 100 NYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIAT 159 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPK--FN 826 + +G+SKG+GFV +E++ +A+ AI+ LNGMLLN +++YV P + ++ER++ K + Sbjct: 160 DENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYT 219 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDL 1006 N+YVKN++ TT++ +ELF FGPI S + + DGK + FGFVN+E +DAV AVE L Sbjct: 220 NLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEAL 279 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 N + + ++LYVGRAQKK+ER LK+ +E E + QG NL++KNLD SV DDEKL Sbjct: 280 NDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSV-DDEKL 338 Query: 1187 KELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQ 1366 +E FA +GTITS KVMR NG +KG GFV F + E+AT+A+ N ++V KPLYVA+AQ Sbjct: 339 EEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQ 398 Query: 1367 RKEERRARLQAQ 1402 RK+ RR++L Q Sbjct: 399 RKDVRRSQLAQQ 410 Score = 159 bits (403), Expect = 4e-38 Identities = 93/290 (32%), Positives = 158/290 (54%), Gaps = 18/290 (6%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 +++ +L + + L+D FS G ++S ++ D N + S G+ +V+F A A++ L Sbjct: 128 IFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGK-SKGFGFVHFEEEGAAKEAIDAL 186 Query: 473 NFTPVNGKPIRIM--YSNRDPSSR----KSGAANIFIKNLDKSIDNKALYDTFSAFGNIL 634 N +NG+ I + S ++ S+ K+ N+++KN++ ++ + F+ FG I+ Sbjct: 187 NGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIV 246 Query: 635 SCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGS 814 S + + G+ KG+GFV YE+ E A A+ LN LN +K+YVG +K ER +V Sbjct: 247 SASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLKK 306 Query: 815 P----------KFN--NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGF 958 K+ N++VKNL +S ++ L+E F +G ITS V+R ++GKS+ FGF Sbjct: 307 QYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKSKGFGF 366 Query: 959 VNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNK 1108 V F P++A A+ + N + K LYV AQ+K R QL + + N+ Sbjct: 367 VCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQARNQ 416 Score = 157 bits (398), Expect = 1e-37 Identities = 100/300 (33%), Positives = 163/300 (54%), Gaps = 6/300 (2%) Frame = +2 Query: 524 DPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFVQYEQ 700 + S ++ +A++++ +L+ S+ LYD FS G++ S +V + ++ S GY +V + Sbjct: 29 ESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFND 88 Query: 701 DESAQNAINELN-----GMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTE 865 E+ + AI +LN G L P +RK+ GS N+++KNL Sbjct: 89 HEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSLRKK------GS---GNIFIKNLHPDIDN 139 Query: 866 DNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVG 1045 L + F FG I S + ++GKS+ FGFV+FE A A++ LNG + +E+YV Sbjct: 140 KALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVA 199 Query: 1046 RAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSC 1225 + ER+ QL+E+ + TNLY+KN++ S DE+ +ELFA+FG I S Sbjct: 200 PHLSRKERDSQLEET----------KAHYTNLYVKNIN-SETTDEQFQELFAKFGPIVSA 248 Query: 1226 KVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRARLQAQF 1405 + +D++G KG GFV ++ EDA +A+ A+N + + LYV AQ+K ER L+ Q+ Sbjct: 249 SLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQY 308 Score = 42.0 bits (97), Expect = 0.011 Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 5/72 (6%) Frame = +2 Query: 1895 EQQRLMLGESLYPLVDQLEHDQ--AAKVTGMLLEMDQTEVLHLIESPDALKSKVAE---A 2059 ++QR LGE LY V ++ A K+TGM+L++ EV L+ES + + E A Sbjct: 503 QKQRQALGEQLYKKVSAKTSNEEAAGKITGMILDLPPQEVFPLLESDELFEQHYKEASAA 562 Query: 2060 MEVLRSAQQQQT 2095 E + Q+QQT Sbjct: 563 YESFKKEQEQQT 574
>Q9ZQA8:PABPX_ARATH Probable polyadenylate-binding protein At2g36660 - Arabidopsis| thaliana (Mouse-ear cress) Length = 609 Score = 340 bits (872), Expect = 2e-92 Identities = 174/371 (46%), Positives = 254/371 (68%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LYVGDL SV + L+D F++ S+ SVR+C+D ++ SL Y Y NF S DA A+E Sbjct: 26 LYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAIEKK 85 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 N + +NGK IR+M+S R P +R++G N+F+KNL +S+ N L D F FGNI+SCKVAT Sbjct: 86 NNSLLNGKMIRVMWSVRAPDARRNGVGNVFVKNLPESVTNAVLQDMFKKFGNIVSCKVAT 145 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNV 832 G+S+GYGFVQ+EQ+++A AI LN ++ DK++YVG F++K +R V K+ N+ Sbjct: 146 LEDGKSRGYGFVQFEQEDAAHAAIQTLNSTIVADKEIYVGKFMKKTDR--VKPEEKYTNL 203 Query: 833 YVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNG 1012 Y+KNL +ED L+E F FG I S+ + + ++ R + FVNF+NP+DA A E +NG Sbjct: 204 YMKNLDADVSEDLLREKFAEFGKIVSLAIAKDENRLCRGYAFVNFDNPEDARRAAETVNG 263 Query: 1013 KKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKE 1192 KF K LYVGRAQKK+ERE L+E F++ ++E + +N+Y+KN++ +V ++E L++ Sbjct: 264 TKFGSKCLYVGRAQKKAEREQLLREQFKEKHEEQKMIAKVSNIYVKNVNVAVTEEE-LRK 322 Query: 1193 LFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRK 1372 F++ GTITS K+M D G +KG GFV F + E+A A+ +G+M KPLYVA+AQ+K Sbjct: 323 HFSQCGTITSTKLMCDEKGKSKGFGFVCFSTPEEAIDAVKTFHGQMFHGKPLYVAIAQKK 382 Query: 1373 EERRARLQAQF 1405 E+R+ +LQ QF Sbjct: 383 EDRKMQLQVQF 393 Score = 180 bits (457), Expect = 2e-44 Identities = 119/301 (39%), Positives = 166/301 (55%), Gaps = 5/301 (1%) Frame = +2 Query: 524 DPSSRKSGA---ANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMS-GESKGYGFVQ 691 D SS S + A++++ +L S+ LYD F+ F ++ S ++ + S G S YG+ Sbjct: 12 DASSSGSSSPVTASLYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYAN 71 Query: 692 YEQDESAQNAINELNGMLLNDKKVYVGPFVRKQE-RENVFGSPKFNNVYVKNLSESTTED 868 + + A AI + N LLN K + V VR + R N G NV+VKNL ES T Sbjct: 72 FLSRQDANLAIEKKNNSLLNGKMIRVMWSVRAPDARRNGVG-----NVFVKNLPESVTNA 126 Query: 869 NLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGR 1048 L+++F FG I S V +DGKSR +GFV FE D A A++ LN DKE+YVG+ Sbjct: 127 VLQDMFKKFGNIVSCKVATLEDGKSRGYGFVQFEQEDAAHAAIQTLNSTIVADKEIYVGK 186 Query: 1049 AQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCK 1228 KK++R ++ +E + TNLY+KNLD V +D L+E FAEFG I S Sbjct: 187 FMKKTDR-VKPEEKY-------------TNLYMKNLDADVSED-LLREKFAEFGKIVSLA 231 Query: 1229 VMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRARLQAQFS 1408 + +D N + +G FV F + EDA RA +NG GSK LYV AQ+K ER L+ QF Sbjct: 232 IAKDENRLCRGYAFVNFDNPEDARRAAETVNGTKFGSKCLYVGRAQKKAEREQLLREQFK 291 Query: 1409 Q 1411 + Sbjct: 292 E 292 Score = 97.8 bits (242), Expect = 2e-19 Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 16/206 (7%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LY+ +LD V + L + F++ G +VS+ + +D N R+ GYA+VNF +P DA RA E + Sbjct: 203 LYMKNLDADVSEDLLREKFAEFGKIVSLAIAKDEN-RLCRGYAFVNFDNPEDARRAAETV 261 Query: 473 NFTPVNGKPIRIMYSNRDPSSRK----------------SGAANIFIKNLDKSIDNKALY 604 N T K + + + + + + +NI++KN++ ++ + L Sbjct: 262 NGTKFGSKCLYVGRAQKKAEREQLLREQFKEKHEEQKMIAKVSNIYVKNVNVAVTEEELR 321 Query: 605 DTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVR 784 FS G I S K+ + G+SKG+GFV + E A +A+ +G + + K +YV + Sbjct: 322 KHFSQCGTITSTKLMCDEKGKSKGFGFVCFSTPEEAIDAVKTFHGQMFHGKPLYVAIAQK 381 Query: 785 KQERENVFGSPKFNNVYVKNLSESTT 862 K++R+ N V + S S + Sbjct: 382 KEDRKMQLQVQFGNRVEARKSSSSAS 407 Score = 65.5 bits (158), Expect = 1e-09 Identities = 33/62 (53%), Positives = 48/62 (77%) Frame = +2 Query: 1910 MLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKSKVAEAMEVLRSAQQQ 2089 +LGE L+PLV++LE A K+TGMLLEMD++E+L L++SP+ L +V EA EVL+S++ Sbjct: 528 LLGELLHPLVEKLEPQLANKITGMLLEMDKSELLLLLKSPEDLAVRVDEAFEVLKSSKTN 587 Query: 2090 QT 2095 T Sbjct: 588 LT 589
>P60050:PABP5_PONPY Polyadenylate-binding protein 5 - Pongo pygmaeus (Orangutan)| Length = 382 Score = 329 bits (844), Expect = 3e-89 Identities = 182/363 (50%), Positives = 235/363 (64%), Gaps = 3/363 (0%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LYVGDLD V + L+ F G + R+CRD TR LGY YVNF PADA AL + Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 NF +NGKP R+M+S D RKSG NIFIKNLDKSIDN+AL+ FSAFGNILSCKV Sbjct: 80 NFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVC 139 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERE---NVFGSPKF 823 + +G SKGY +V ++ +A AI +NG+ LN+++VYVG F +ER F Sbjct: 140 DDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATF 198 Query: 824 NNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVED 1003 NV+VKN+ + ++ LKELF +GP SV V+R GKS+ FGFV +E + A AV D Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLD 258 Query: 1004 LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEK 1183 L+GK D K LYVGRAQKK ER +L+ FE+ + R G +Y+KNLD ++ +DEK Sbjct: 259 LHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETI-NDEK 317 Query: 1184 LKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALA 1363 LKE F+ FG+I+ KVM + G KG G V F S E+AT+A+ MNG++VGSKPL+V L Sbjct: 318 LKEEFSSFGSISRAKVMMEV-GQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLG 376 Query: 1364 QRK 1372 Q + Sbjct: 377 QAR 379 Score = 151 bits (381), Expect = 1e-35 Identities = 96/289 (33%), Positives = 160/289 (55%), Gaps = 2/289 (0%) Frame = +2 Query: 551 ANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESK-GYGFVQYEQDESAQNAIN 727 A +++ +LD + LY F G + ++ + S GYG+V + A+ A+N Sbjct: 18 AALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALN 77 Query: 728 ELNGMLLNDKKVYVGPF-VRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPI 904 +N L+N K PF + + ++ N+++KNL +S L LF FG I Sbjct: 78 TMNFDLINGK-----PFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNI 132 Query: 905 TSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLK 1084 S VV DD S+ + +V+F++ A A+ +NG + +++++YVGR + ER +++ Sbjct: 133 LSCKVV-CDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVR 191 Query: 1085 ESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGS 1264 T DR TN+++KN+ +DD EKLKELF E+G S KV+RD++G +KG Sbjct: 192 ---------TRDRATFTNVFVKNIGDDIDD-EKLKELFCEYGPTESVKVIRDASGKSKGF 241 Query: 1265 GFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRARLQAQFSQ 1411 GFV +++ E A +A++ ++GK + K LYV AQ+K ER A L+ +F + Sbjct: 242 GFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFER 290
>P60049:PABP5_PANTR Polyadenylate-binding protein 5 - Pan troglodytes (Chimpanzee)| Length = 382 Score = 329 bits (844), Expect = 3e-89 Identities = 182/363 (50%), Positives = 235/363 (64%), Gaps = 3/363 (0%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LYVGDLD V + L+ F G + R+CRD TR LGY YVNF PADA AL + Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 NF +NGKP R+M+S D RKSG NIFIKNLDKSIDN+AL+ FSAFGNILSCKV Sbjct: 80 NFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVC 139 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERE---NVFGSPKF 823 + +G SKGY +V ++ +A AI +NG+ LN+++VYVG F +ER F Sbjct: 140 DDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATF 198 Query: 824 NNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVED 1003 NV+VKN+ + ++ LKELF +GP SV V+R GKS+ FGFV +E + A AV D Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLD 258 Query: 1004 LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEK 1183 L+GK D K LYVGRAQKK ER +L+ FE+ + R G +Y+KNLD ++ +DEK Sbjct: 259 LHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETI-NDEK 317 Query: 1184 LKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALA 1363 LKE F+ FG+I+ KVM + G KG G V F S E+AT+A+ MNG++VGSKPL+V L Sbjct: 318 LKEEFSSFGSISRAKVMMEV-GQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLG 376 Query: 1364 QRK 1372 Q + Sbjct: 377 QAR 379 Score = 151 bits (381), Expect = 1e-35 Identities = 96/289 (33%), Positives = 160/289 (55%), Gaps = 2/289 (0%) Frame = +2 Query: 551 ANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESK-GYGFVQYEQDESAQNAIN 727 A +++ +LD + LY F G + ++ + S GYG+V + A+ A+N Sbjct: 18 AALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALN 77 Query: 728 ELNGMLLNDKKVYVGPF-VRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPI 904 +N L+N K PF + + ++ N+++KNL +S L LF FG I Sbjct: 78 TMNFDLINGK-----PFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNI 132 Query: 905 TSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLK 1084 S VV DD S+ + +V+F++ A A+ +NG + +++++YVGR + ER +++ Sbjct: 133 LSCKVV-CDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVR 191 Query: 1085 ESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGS 1264 T DR TN+++KN+ +DD EKLKELF E+G S KV+RD++G +KG Sbjct: 192 ---------TRDRATFTNVFVKNIGDDIDD-EKLKELFCEYGPTESVKVIRDASGKSKGF 241 Query: 1265 GFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRARLQAQFSQ 1411 GFV +++ E A +A++ ++GK + K LYV AQ+K ER A L+ +F + Sbjct: 242 GFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFER 290
>Q7JGR2:PABP5_MACMU Polyadenylate-binding protein 5 - Macaca mulatta (Rhesus macaque)| Length = 382 Score = 329 bits (844), Expect = 3e-89 Identities = 182/363 (50%), Positives = 235/363 (64%), Gaps = 3/363 (0%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LYVGDLD V + L+ F G + R+CRD TR LGY YVNF PADA AL + Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 NF +NGKP R+M+S D RKSG NIFIKNLDKSIDN+AL+ FSAFGNILSCKV Sbjct: 80 NFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVC 139 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERE---NVFGSPKF 823 + +G SKGY +V ++ +A AI +NG+ LN+++VYVG F +ER F Sbjct: 140 DDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATF 198 Query: 824 NNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVED 1003 NV+VKN+ + ++ LKELF +GP SV V+R GKS+ FGFV +E + A AV D Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLD 258 Query: 1004 LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEK 1183 L+GK D K LYVGRAQKK ER +L+ FE+ + R G +Y+KNLD ++ +DEK Sbjct: 259 LHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETI-NDEK 317 Query: 1184 LKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALA 1363 LKE F+ FG+I+ KVM + G KG G V F S E+AT+A+ MNG++VGSKPL+V L Sbjct: 318 LKEEFSSFGSISRAKVMMEV-GQGKGFGVVCFSSFEEATKAVDEMNGRVVGSKPLHVTLG 376 Query: 1364 QRK 1372 Q + Sbjct: 377 QAR 379 Score = 151 bits (381), Expect = 1e-35 Identities = 96/289 (33%), Positives = 160/289 (55%), Gaps = 2/289 (0%) Frame = +2 Query: 551 ANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESK-GYGFVQYEQDESAQNAIN 727 A +++ +LD + LY F G + ++ + S GYG+V + A+ A+N Sbjct: 18 AALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALN 77 Query: 728 ELNGMLLNDKKVYVGPF-VRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPI 904 +N L+N K PF + + ++ N+++KNL +S L LF FG I Sbjct: 78 TMNFDLINGK-----PFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNI 132 Query: 905 TSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLK 1084 S VV DD S+ + +V+F++ A A+ +NG + +++++YVGR + ER +++ Sbjct: 133 LSCKVV-CDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVR 191 Query: 1085 ESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGS 1264 T DR TN+++KN+ +DD EKLKELF E+G S KV+RD++G +KG Sbjct: 192 ---------TRDRATFTNVFVKNIGDDIDD-EKLKELFCEYGPTESVKVIRDASGKSKGF 241 Query: 1265 GFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRARLQAQFSQ 1411 GFV +++ E A +A++ ++GK + K LYV AQ+K ER A L+ +F + Sbjct: 242 GFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFER 290
>P60048:PABP5_HYLLA Polyadenylate-binding protein 5 - Hylobates lar (Common gibbon)| Length = 382 Score = 329 bits (844), Expect = 3e-89 Identities = 182/363 (50%), Positives = 235/363 (64%), Gaps = 3/363 (0%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LYVGDLD V + L+ F G + R+CRD TR LGY YVNF PADA AL + Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 NF +NGKP R+M+S D RKSG NIFIKNLDKSIDN+AL+ FSAFGNILSCKV Sbjct: 80 NFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVC 139 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERE---NVFGSPKF 823 + +G SKGY +V ++ +A AI +NG+ LN+++VYVG F +ER F Sbjct: 140 DDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATF 198 Query: 824 NNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVED 1003 NV+VKN+ + ++ LKELF +GP SV V+R GKS+ FGFV +E + A AV D Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLD 258 Query: 1004 LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEK 1183 L+GK D K LYVGRAQKK ER +L+ FE+ + R G +Y+KNLD ++ +DEK Sbjct: 259 LHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETI-NDEK 317 Query: 1184 LKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALA 1363 LKE F+ FG+I+ KVM + G KG G V F S E+AT+A+ MNG++VGSKPL+V L Sbjct: 318 LKEEFSSFGSISRAKVMMEV-GQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLG 376 Query: 1364 QRK 1372 Q + Sbjct: 377 QAR 379 Score = 151 bits (381), Expect = 1e-35 Identities = 96/289 (33%), Positives = 160/289 (55%), Gaps = 2/289 (0%) Frame = +2 Query: 551 ANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESK-GYGFVQYEQDESAQNAIN 727 A +++ +LD + LY F G + ++ + S GYG+V + A+ A+N Sbjct: 18 AALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALN 77 Query: 728 ELNGMLLNDKKVYVGPF-VRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPI 904 +N L+N K PF + + ++ N+++KNL +S L LF FG I Sbjct: 78 TMNFDLINGK-----PFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNI 132 Query: 905 TSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLK 1084 S VV DD S+ + +V+F++ A A+ +NG + +++++YVGR + ER +++ Sbjct: 133 LSCKVV-CDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVR 191 Query: 1085 ESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGS 1264 T DR TN+++KN+ +DD EKLKELF E+G S KV+RD++G +KG Sbjct: 192 ---------TRDRATFTNVFVKNIGDDIDD-EKLKELFCEYGPTESVKVIRDASGKSKGF 241 Query: 1265 GFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRARLQAQFSQ 1411 GFV +++ E A +A++ ++GK + K LYV AQ+K ER A L+ +F + Sbjct: 242 GFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFER 290
>Q96DU9:PABP5_HUMAN Polyadenylate-binding protein 5 - Homo sapiens (Human)| Length = 382 Score = 329 bits (844), Expect = 3e-89 Identities = 182/363 (50%), Positives = 235/363 (64%), Gaps = 3/363 (0%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LYVGDLD V + L+ F G + R+CRD TR LGY YVNF PADA AL + Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 NF +NGKP R+M+S D RKSG NIFIKNLDKSIDN+AL+ FSAFGNILSCKV Sbjct: 80 NFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVC 139 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERE---NVFGSPKF 823 + +G SKGY +V ++ +A AI +NG+ LN+++VYVG F +ER F Sbjct: 140 DDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATF 198 Query: 824 NNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVED 1003 NV+VKN+ + ++ LKELF +GP SV V+R GKS+ FGFV +E + A AV D Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLD 258 Query: 1004 LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEK 1183 L+GK D K LYVGRAQKK ER +L+ FE+ + R G +Y+KNLD ++ +DEK Sbjct: 259 LHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETI-NDEK 317 Query: 1184 LKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALA 1363 LKE F+ FG+I+ KVM + G KG G V F S E+AT+A+ MNG++VGSKPL+V L Sbjct: 318 LKEEFSSFGSISRAKVMMEV-GQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLG 376 Query: 1364 QRK 1372 Q + Sbjct: 377 QAR 379 Score = 151 bits (381), Expect = 1e-35 Identities = 96/289 (33%), Positives = 160/289 (55%), Gaps = 2/289 (0%) Frame = +2 Query: 551 ANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESK-GYGFVQYEQDESAQNAIN 727 A +++ +LD + LY F G + ++ + S GYG+V + A+ A+N Sbjct: 18 AALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALN 77 Query: 728 ELNGMLLNDKKVYVGPF-VRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPI 904 +N L+N K PF + + ++ N+++KNL +S L LF FG I Sbjct: 78 TMNFDLINGK-----PFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNI 132 Query: 905 TSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLK 1084 S VV DD S+ + +V+F++ A A+ +NG + +++++YVGR + ER +++ Sbjct: 133 LSCKVV-CDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVR 191 Query: 1085 ESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGS 1264 T DR TN+++KN+ +DD EKLKELF E+G S KV+RD++G +KG Sbjct: 192 ---------TRDRATFTNVFVKNIGDDIDD-EKLKELFCEYGPTESVKVIRDASGKSKGF 241 Query: 1265 GFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRARLQAQFSQ 1411 GFV +++ E A +A++ ++GK + K LYV AQ+K ER A L+ +F + Sbjct: 242 GFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFER 290
>P60047:PABP5_GORGO Polyadenylate-binding protein 5 - Gorilla gorilla gorilla (Lowland| gorilla) Length = 382 Score = 329 bits (844), Expect = 3e-89 Identities = 182/363 (50%), Positives = 235/363 (64%), Gaps = 3/363 (0%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LYVGDLD V + L+ F G + R+CRD TR LGY YVNF PADA AL + Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 NF +NGKP R+M+S D RKSG NIFIKNLDKSIDN+AL+ FSAFGNILSCKV Sbjct: 80 NFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVC 139 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERE---NVFGSPKF 823 + +G SKGY +V ++ +A AI +NG+ LN+++VYVG F +ER F Sbjct: 140 DDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATF 198 Query: 824 NNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVED 1003 NV+VKN+ + ++ LKELF +GP SV V+R GKS+ FGFV +E + A AV D Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLD 258 Query: 1004 LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEK 1183 L+GK D K LYVGRAQKK ER +L+ FE+ + R G +Y+KNLD ++ +DEK Sbjct: 259 LHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETI-NDEK 317 Query: 1184 LKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALA 1363 LKE F+ FG+I+ KVM + G KG G V F S E+AT+A+ MNG++VGSKPL+V L Sbjct: 318 LKEEFSSFGSISRAKVMMEV-GQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLG 376 Query: 1364 QRK 1372 Q + Sbjct: 377 QAR 379 Score = 151 bits (381), Expect = 1e-35 Identities = 96/289 (33%), Positives = 160/289 (55%), Gaps = 2/289 (0%) Frame = +2 Query: 551 ANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESK-GYGFVQYEQDESAQNAIN 727 A +++ +LD + LY F G + ++ + S GYG+V + A+ A+N Sbjct: 18 AALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALN 77 Query: 728 ELNGMLLNDKKVYVGPF-VRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPI 904 +N L+N K PF + + ++ N+++KNL +S L LF FG I Sbjct: 78 TMNFDLINGK-----PFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNI 132 Query: 905 TSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLK 1084 S VV DD S+ + +V+F++ A A+ +NG + +++++YVGR + ER +++ Sbjct: 133 LSCKVV-CDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVR 191 Query: 1085 ESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGS 1264 T DR TN+++KN+ +DD EKLKELF E+G S KV+RD++G +KG Sbjct: 192 ---------TRDRATFTNVFVKNIGDDIDD-EKLKELFCEYGPTESVKVIRDASGKSKGF 241 Query: 1265 GFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRARLQAQFSQ 1411 GFV +++ E A +A++ ++GK + K LYV AQ+K ER A L+ +F + Sbjct: 242 GFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFER 290
>P39684:PES4_YEAST Protein PES4 - Saccharomyces cerevisiae (Baker's yeast)| Length = 611 Score = 173 bits (439), Expect = 3e-42 Identities = 127/389 (32%), Positives = 191/389 (49%), Gaps = 41/389 (10%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++GDL +V + L +F + S VS +VC D T+ SLG+ Y+NF +A +A+E L Sbjct: 93 LFIGDLHETVTEETLKGIFKKYPSFVSAKVCLDSVTKKSLGHGYLNFEDKEEAEKAMEEL 152 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNL---DKSIDNKALYDTFSAFGNILSCK 643 N+T VNGK IRIM S R+ + RK+ N+F NL + + + YDTFS +G ILSCK Sbjct: 153 NYTKVNGKEIRIMPSLRNTTFRKNFGTNVFFSNLPLNNPLLTTRVFYDTFSRYGKILSCK 212 Query: 644 VATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQ----------- 790 + + K GFV +E +++A+N I N KK+ G K+ Sbjct: 213 LDSR-----KDIGFVYFEDEKTARNVIKMYNNTSFFGKKILCGIHFDKEVRSVPNFETQK 267 Query: 791 -------------------------ERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNF 895 E +N++ S + N++++KNL TT D++ F Sbjct: 268 SRLDAETIIEKEQSLNEKHSKGNDKESKNIYSSSQ-NSIFIKNLPTITTRDDILNFFSEV 326 Query: 896 GPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREM 1075 GPI S+ + A K + FV ++N D+ A++ N F K+L V RAQ K ER Sbjct: 327 GPIKSIYLSNATKVK-YLWAFVTYKNSSDSEKAIKRYNNFYFRGKKLLVTRAQDKEER-- 383 Query: 1076 QLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVN 1255 F +S K + L+L+NL +V + E LK L + I K+ D N Sbjct: 384 ---AKFIESQKI-------STLFLENL-SAVCNKEFLKYLCHQ-ENIRPFKIQIDGYDEN 431 Query: 1256 KG--SGFVAFKSSEDATRALVAMNGKMVG 1336 SGF+ F++ EDATR +N ++VG Sbjct: 432 SSTYSGFIKFRNFEDATRIFNFLNNRLVG 460 Score = 90.9 bits (224), Expect = 2e-17 Identities = 78/306 (25%), Positives = 138/306 (45%), Gaps = 24/306 (7%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFVQYEQDESAQNAINEL 733 +FI +L +++ + L F + + +S KV + ++ +S G+G++ +E E A+ A+ EL Sbjct: 93 LFIGDLHETVTEETLKGIFKKYPSFVSAKVCLDSVTKKSLGHGYLNFEDKEEAEKAMEEL 152 Query: 734 NGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSV 913 N +N K++ + P +R FG+ NV+ NL + + + F + Sbjct: 153 NYTKVNGKEIRIMPSLRNTTFRKNFGT----NVFFSNLPLNNPLLTTRVFYDTFSRYGKI 208 Query: 914 IVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVG---------------- 1045 + + D K GFV FE+ A + ++ N F K++ G Sbjct: 209 LSCKLDSRKD--IGFVYFEDEKTARNVIKMYNNTSFFGKKILCGIHFDKEVRSVPNFETQ 266 Query: 1046 ----RAQKKSEREMQLKESFEKSN-KETAD--RNQGTNLYLKNLDGSVDDDEKLKELFAE 1204 A+ E+E L E K N KE+ + + ++++KNL D+ L F+E Sbjct: 267 KSRLDAETIIEKEQSLNEKHSKGNDKESKNIYSSSQNSIFIKNLPTITTRDDIL-NFFSE 325 Query: 1205 FGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERR 1384 G I S + ++ V FV +K+S D+ +A+ N K L V AQ KEER Sbjct: 326 VGPIKSI-YLSNATKVKYLWAFVTYKNSSDSEKAIKRYNNFYFRGKKLLVTRAQDKEERA 384 Query: 1385 ARLQAQ 1402 +++Q Sbjct: 385 KFIESQ 390
>P38760:YHH5_YEAST Uncharacterized RNA-binding protein YHR015W - Saccharomyces| cerevisiae (Baker's yeast) Length = 659 Score = 122 bits (307), Expect = 5e-27 Identities = 97/377 (25%), Positives = 167/377 (44%), Gaps = 28/377 (7%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++G+L +V + L +F + S S +VCRD T+ SLGY Y+NF DA A + Sbjct: 113 LFIGNLKSTVTEEMLRKIFKRYQSFESAKVCRDFLTKKSLGYGYLNFKDKNDAESARKEF 172 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNL---DKSIDNKALYDTFSAFGNILSCK 643 N+T G+ ++IM S ++ RK+ N+F NL + + ++ Y +GN+LSC Sbjct: 173 NYTVFFGQEVKIMPSMKNTLFRKNIGTNVFFSNLPLENPQLTTRSFYLIMIEYGNVLSC- 231 Query: 644 VATEMSGESKGYGFVQYEQDESAQNAINELNGM----------LLNDKKVYVGPFVRKQE 793 + K GFV ++ D SA+N I + N L DK+V P K++ Sbjct: 232 ----LLERRKNIGFVYFDNDISARNVIKKYNNQEFFGNKIICGLHFDKEVRTRPEFTKRK 287 Query: 794 R---------------ENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRA 928 + N+ + + + VKNL TT++ + + F GPI SV + Sbjct: 288 KMIGSDIVIEDELLASNNLSDNARSKTILVKNLPSDTTQEEVLDYFSTIGPIKSVF-ISE 346 Query: 929 DDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNK 1108 + FV ++N +++ A + LN F + ++VG + +K Sbjct: 347 KQANTPHKAFVTYKNEEESKKAQKCLNKTIFKNHTIWVGPGK-------------DKPVH 393 Query: 1109 ETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSS 1288 N+ T +YLKNL + + + + E + K+ ++ G V S Sbjct: 394 NQIGTNKKTKVYLKNLSFNCNKEFISQLCLQEKIRFSEIKITNYNSLNWTFCGHVECFSR 453 Query: 1289 EDATRALVAMNGKMVGS 1339 DA R ++ +++GS Sbjct: 454 SDAERLFNILDRRLIGS 470
>Q5R9Z6:ELAV2_PONPY ELAV-like protein 2 - Pongo pygmaeus (Orangutan)| Length = 359 Score = 118 bits (295), Expect = 1e-25 Identities = 84/320 (26%), Positives = 145/320 (45%), Gaps = 61/320 (19%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L V L ++ +L +F +G + S ++ RD T SLGY +VN+ P DA +A+ L Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKV-A 649 N + K I++ Y+ PSS AN+++ L K++ K L FS +G I++ ++ Sbjct: 101 NGLRLQTKTIKVSYAR--PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILV 158 Query: 650 TEMSGESKGYGFVQYEQDESAQNAINELNG-----------------------------M 742 +++G S+G GF+++++ A+ AI LNG + Sbjct: 159 DQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQL 218 Query: 743 LLNDKKVYVGPFVRKQER-------ENVFGSPKFNN-----------------------V 832 + + Y GP ++ +R +G +F+ + Sbjct: 219 YQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCI 278 Query: 833 YVKNLSESTTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHAVEDLN 1009 +V NL+ E L ++FG FG +T+V V+R + K + FGFV N D+A A+ LN Sbjct: 279 FVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLN 338 Query: 1010 GKKFDDKELYVGRAQKKSER 1069 G + D+ L V K+ + Sbjct: 339 GYRLGDRVLQVSFKTNKTHK 358 Score = 110 bits (275), Expect = 3e-23 Identities = 93/335 (27%), Positives = 153/335 (45%), Gaps = 49/335 (14%) Frame = +2 Query: 524 DPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCK-VATEMSGESKGYGFVQYEQ 700 D + + N+ + L +++ + L F + G I SCK V +++G+S GYGFV Y Sbjct: 30 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 89 Query: 701 DESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKE 880 + A+ AIN LNG+ L K + V + R S + N+YV L ++ T+ L++ Sbjct: 90 PKDAEKAINTLNGLRLQTKTIKVS-YARPSS-----ASIRDANLYVSGLPKTMTQKELEQ 143 Query: 881 LFGNFGP-ITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKK--FDDKELYVGRA 1051 LF +G ITS I+V G SR GF+ F+ +A A++ LNG+K + + V A Sbjct: 144 LFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFA 203 Query: 1052 QKKSEREMQ--LKESFEKSNK-------ETADRNQGTNLY----------LKNLDGSVD- 1171 S++ Q L + ++ N+ + A R + NL +DG Sbjct: 204 NNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSL 263 Query: 1172 ------------------------DDEKLKELFAEFGTITSCKVMRDSN-GVNKGSGFVA 1276 D+ L ++F FG +T+ KV+RD N KG GFV Sbjct: 264 AGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVT 323 Query: 1277 FKSSEDATRALVAMNGKMVGSKPLYVALAQRKEER 1381 + ++A A+ ++NG +G + L V+ K + Sbjct: 324 MTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHK 358
>Q12926:ELAV2_HUMAN ELAV-like protein 2 - Homo sapiens (Human)| Length = 359 Score = 118 bits (295), Expect = 1e-25 Identities = 84/320 (26%), Positives = 145/320 (45%), Gaps = 61/320 (19%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L V L ++ +L +F +G + S ++ RD T SLGY +VN+ P DA +A+ L Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKV-A 649 N + K I++ Y+ PSS AN+++ L K++ K L FS +G I++ ++ Sbjct: 101 NGLRLQTKTIKVSYAR--PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILV 158 Query: 650 TEMSGESKGYGFVQYEQDESAQNAINELNG-----------------------------M 742 +++G S+G GF+++++ A+ AI LNG + Sbjct: 159 DQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQL 218 Query: 743 LLNDKKVYVGPFVRKQER-------ENVFGSPKFNN-----------------------V 832 + + Y GP ++ +R +G +F+ + Sbjct: 219 YQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCI 278 Query: 833 YVKNLSESTTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHAVEDLN 1009 +V NL+ E L ++FG FG +T+V V+R + K + FGFV N D+A A+ LN Sbjct: 279 FVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLN 338 Query: 1010 GKKFDDKELYVGRAQKKSER 1069 G + D+ L V K+ + Sbjct: 339 GYRLGDRVLQVSFKTNKTHK 358 Score = 110 bits (275), Expect = 3e-23 Identities = 93/335 (27%), Positives = 153/335 (45%), Gaps = 49/335 (14%) Frame = +2 Query: 524 DPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCK-VATEMSGESKGYGFVQYEQ 700 D + + N+ + L +++ + L F + G I SCK V +++G+S GYGFV Y Sbjct: 30 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 89 Query: 701 DESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKE 880 + A+ AIN LNG+ L K + V + R S + N+YV L ++ T+ L++ Sbjct: 90 PKDAEKAINTLNGLRLQTKTIKVS-YARPSS-----ASIRDANLYVSGLPKTMTQKELEQ 143 Query: 881 LFGNFGP-ITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKK--FDDKELYVGRA 1051 LF +G ITS I+V G SR GF+ F+ +A A++ LNG+K + + V A Sbjct: 144 LFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFA 203 Query: 1052 QKKSEREMQ--LKESFEKSNK-------ETADRNQGTNLY----------LKNLDGSVD- 1171 S++ Q L + ++ N+ + A R + NL +DG Sbjct: 204 NNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSL 263 Query: 1172 ------------------------DDEKLKELFAEFGTITSCKVMRDSN-GVNKGSGFVA 1276 D+ L ++F FG +T+ KV+RD N KG GFV Sbjct: 264 AGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVT 323 Query: 1277 FKSSEDATRALVAMNGKMVGSKPLYVALAQRKEER 1381 + ++A A+ ++NG +G + L V+ K + Sbjct: 324 MTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHK 358
>Q8CH84:ELAV2_RAT ELAV-like protein 2 - Rattus norvegicus (Rat)| Length = 359 Score = 116 bits (291), Expect = 4e-25 Identities = 82/315 (26%), Positives = 143/315 (45%), Gaps = 61/315 (19%) Frame = +2 Query: 308 LDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEMLNFTPV 487 L ++ +L +F +G + S ++ RD T SLGY +VN+ P DA +A+ LN + Sbjct: 46 LPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL 105 Query: 488 NGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKV-ATEMSG 664 K I++ Y+ PSS AN+++ L K++ K L FS +G I++ ++ +++G Sbjct: 106 QTKTIKVSYAR--PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 163 Query: 665 ESKGYGFVQYEQDESAQNAINELNG-----------------------------MLLNDK 757 S+G GF+++++ A+ AI LNG + + Sbjct: 164 ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPN 223 Query: 758 KVYVGPFVRKQER-------ENVFGSPKFNN-----------------------VYVKNL 847 + Y GP ++ +R +G +F+ ++V NL Sbjct: 224 RRYPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNL 283 Query: 848 SESTTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFD 1024 + E L ++FG FG +T+V V+R + K + FGFV N D+A A+ LNG + Sbjct: 284 APDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLG 343 Query: 1025 DKELYVGRAQKKSER 1069 D+ L V K+ + Sbjct: 344 DRVLQVSFKTNKTHK 358 Score = 108 bits (269), Expect = 1e-22 Identities = 93/335 (27%), Positives = 152/335 (45%), Gaps = 49/335 (14%) Frame = +2 Query: 524 DPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCK-VATEMSGESKGYGFVQYEQ 700 D + + N+ L +++ + L F + G I SCK V +++G+S GYGFV Y Sbjct: 30 DSGNTEDSKTNLIDNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 89 Query: 701 DESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKE 880 + A+ AIN LNG+ L K + V + R S + N+YV L ++ T+ L++ Sbjct: 90 PKDAEKAINTLNGLRLQTKTIKVS-YARPSS-----ASIRDANLYVSGLPKTMTQKELEQ 143 Query: 881 LFGNFGP-ITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKK--FDDKELYVGRA 1051 LF +G ITS I+V G SR GF+ F+ +A A++ LNG+K + + V A Sbjct: 144 LFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFA 203 Query: 1052 QKKSEREMQ--LKESFEKSNK-------ETADRNQGTNLY----------LKNLDGSVD- 1171 S++ Q L + ++ N+ + A R + NL +DG Sbjct: 204 NNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSL 263 Query: 1172 ------------------------DDEKLKELFAEFGTITSCKVMRDSN-GVNKGSGFVA 1276 D+ L ++F FG +T+ KV+RD N KG GFV Sbjct: 264 AGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVT 323 Query: 1277 FKSSEDATRALVAMNGKMVGSKPLYVALAQRKEER 1381 + ++A A+ ++NG +G + L V+ K + Sbjct: 324 MTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHK 358
>Q60899:ELAV2_MOUSE ELAV-like protein 2 - Mus musculus (Mouse)| Length = 360 Score = 116 bits (290), Expect = 5e-25 Identities = 85/321 (26%), Positives = 144/321 (44%), Gaps = 62/321 (19%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L V L ++ +L +F +G + S ++ RD T SLGY +VN+ P DA +A+ L Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKV-A 649 N + K I++ Y+ PSS AN+++ L K++ K L FS +G I++ ++ Sbjct: 101 NGLRLQTKTIKVSYAR--PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILV 158 Query: 650 TEMSGESKGYGFVQYEQDESAQNAINELNG-----------------------------M 742 +++G S+G GF+++++ A+ AI LNG + Sbjct: 159 DQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQL 218 Query: 743 LLNDKKVYVGPFVRKQER------------------------------ENVFGSPKFN-N 829 + + Y GP ++ +R N+ G P Sbjct: 219 YQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMTIDGMTSLAGINIPGHPGTGWC 278 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHAVEDL 1006 ++V NL+ E L ++FG FG +T+V V+R + K + FGFV N D+A A+ L Sbjct: 279 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 338 Query: 1007 NGKKFDDKELYVGRAQKKSER 1069 NG + D+ L V K+ + Sbjct: 339 NGYRLGDRVLQVSFKTNKTHK 359 Score = 110 bits (274), Expect = 3e-23 Identities = 93/336 (27%), Positives = 153/336 (45%), Gaps = 50/336 (14%) Frame = +2 Query: 524 DPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCK-VATEMSGESKGYGFVQYEQ 700 D + + N+ + L +++ + L F + G I SCK V +++G+S GYGFV Y Sbjct: 30 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 89 Query: 701 DESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKE 880 + A+ AIN LNG+ L K + V + R S + N+YV L ++ T+ L++ Sbjct: 90 PKDAEKAINTLNGLRLQTKTIKVS-YARPSS-----ASIRDANLYVSGLPKTMTQKELEQ 143 Query: 881 LFGNFGP-ITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKK--FDDKELYVGRA 1051 LF +G ITS I+V G SR GF+ F+ +A A++ LNG+K + + V A Sbjct: 144 LFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFA 203 Query: 1052 QKKSEREMQ--LKESFEKSNK-------ETADRNQGTNLY-----------LKNLDGSVD 1171 S++ Q L + ++ N+ + A R + NL +DG Sbjct: 204 NNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMTIDGMTS 263 Query: 1172 -------------------------DDEKLKELFAEFGTITSCKVMRDSN-GVNKGSGFV 1273 D+ L ++F FG +T+ KV+RD N KG GFV Sbjct: 264 LAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFV 323 Query: 1274 AFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEER 1381 + ++A A+ ++NG +G + L V+ K + Sbjct: 324 TMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHK 359
>Q15717:ELAV1_HUMAN ELAV-like protein 1 - Homo sapiens (Human)| Length = 326 Score = 115 bits (287), Expect = 1e-24 Identities = 85/307 (27%), Positives = 140/307 (45%), Gaps = 48/307 (15%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L V L ++ +L +FS +G V S ++ RD SLGY +VN+ + DA RA+ L Sbjct: 22 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTL 81 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 N + K I++ Y+ PSS AN++I L +++ K + D FS FG I++ +V Sbjct: 82 NGLRLQSKTIKVSYAR--PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLV 139 Query: 653 EM-SGESKGYGFVQYEQDESAQNAINELNGMLL--NDKKVYVGPFVRKQERENV------ 805 + +G S+G F+++++ A+ AI NG + + + V + +NV Sbjct: 140 DQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQL 199 Query: 806 -------FGSPKFNN-------------------------------VYVKNLSESTTEDN 871 FG P + +++ NL + E Sbjct: 200 YHSPARRFGGPVHHQAQRFRFSPMGVDHMSGLSGVNVPGNASSGWCIFIYNLGQDADEGI 259 Query: 872 LKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGR 1048 L ++FG FG +T+V V+R + K + FGFV N ++A A+ LNG + DK L V Sbjct: 260 LWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSF 319 Query: 1049 AQKKSER 1069 KS + Sbjct: 320 KTNKSHK 326 Score = 103 bits (256), Expect = 4e-21 Identities = 84/316 (26%), Positives = 139/316 (43%), Gaps = 37/316 (11%) Frame = +2 Query: 545 GAANIFIKNLDKSIDNKALYDTFSAFGNILSCK-VATEMSGESKGYGFVQYEQDESAQNA 721 G N+ + L +++ L FS+ G + S K + +++G S GYGFV Y + A+ A Sbjct: 18 GRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERA 77 Query: 722 INELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGP 901 IN LNG+ L K + V + E + K N+Y+ L + T+ +++++F FG Sbjct: 78 INTLNGLRLQSKTIKVS--YARPSSEVI----KDANLYISGLPRTMTQKDVEDMFSRFGR 131 Query: 902 -ITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDD----------------- 1027 I S ++V G SR F+ F+ +A A+ NG K Sbjct: 132 IINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNK 191 Query: 1028 -----KELYVGRAQKKSEREMQLKESFEKSN------------KETADRNQGTNLYLKNL 1156 +LY A++ + F S + + G +++ NL Sbjct: 192 NVALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHMSGLSGVNVPGNASSGWCIFIYNL 251 Query: 1157 DGSVDDDEKLKELFAEFGTITSCKVMRDSN-GVNKGSGFVAFKSSEDATRALVAMNGKMV 1333 G D+ L ++F FG +T+ KV+RD N KG GFV + E+A A+ ++NG + Sbjct: 252 -GQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRL 310 Query: 1334 GSKPLYVALAQRKEER 1381 G K L V+ K + Sbjct: 311 GDKILQVSFKTNKSHK 326 Score = 73.6 bits (179), Expect = 4e-12 Identities = 51/190 (26%), Positives = 93/190 (48%), Gaps = 4/190 (2%) Frame = +2 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVHAVED 1003 N+ V L ++ T+D L+ LF + G + S ++R G S +GFVN+ DA A+ Sbjct: 21 NLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINT 80 Query: 1004 LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEK 1183 LNG + K + V A+ SE +K++ NLY+ L ++ + Sbjct: 81 LNGLRLQSKTIKVSYARPSSE---VIKDA---------------NLYISGLPRTMTQKD- 121 Query: 1184 LKELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATRALVAMNGKMV--GSKPLYV 1354 ++++F+ FG I + +V+ D + G+++G F+ F +A A+ + NG S+P+ V Sbjct: 122 VEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITV 181 Query: 1355 ALAQRKEERR 1384 A + + Sbjct: 182 KFAANPNQNK 191
>O14102:SAP49_SCHPO Spliceosome-associated protein 49 - Schizosaccharomyces pombe| (Fission yeast) Length = 335 Score = 114 bits (284), Expect = 2e-24 Identities = 72/207 (34%), Positives = 105/207 (50%), Gaps = 4/207 (1%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 +Y+G+LD V D+ LF++ Q G VV++ + RD G+ + F D A ++L Sbjct: 13 IYLGNLDEKVTDSILFELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHEQDVEYACQIL 72 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSC-KVA 649 N + GKPIR+ +++D AN+F+ NLD +D + LYDTFSA G ++ +VA Sbjct: 73 NQVKLFGKPIRVNRASQDRGVNTLIGANLFVGNLDPLVDERVLYDTFSALGQLVKAPQVA 132 Query: 650 TEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVG-PFVR--KQERENVFGSPK 820 + +G SKGYGFV Y+ E+A AI +N L +K + V F R K ER K Sbjct: 133 RDENGRSKGYGFVSYDSFETADAAIEAMNNQFLMNKPITVSYAFKREGKGERHGDIAERK 192 Query: 821 FNNVYVKNLSESTTEDNLKELFGNFGP 901 KN T + L F P Sbjct: 193 LAAAAKKNKVAVTPQSTLPPGFSPATP 219 Score = 79.0 bits (193), Expect = 8e-14 Identities = 60/189 (31%), Positives = 91/189 (48%), Gaps = 2/189 (1%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRC-FGFVNFENPDDAVHAVEDL 1006 +Y+ NL E T+ L EL GP+ ++ + R S FGF F + D +A + L Sbjct: 13 IYLGNLDEKVTDSILFELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHEQDVEYACQIL 72 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 N K K + V RA S + G NL++ NLD VD+ L Sbjct: 73 NQVKLFGKPIRVNRA----------------SQDRGVNTLIGANLFVGNLDPLVDE-RVL 115 Query: 1187 KELFAEFGTITSC-KVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALA 1363 + F+ G + +V RD NG +KG GFV++ S E A A+ AMN + + +KP+ V+ A Sbjct: 116 YDTFSALGQLVKAPQVARDENGRSKGYGFVSYDSFETADAAIEAMNNQFLMNKPITVSYA 175 Query: 1364 QRKEERRAR 1390 ++E + R Sbjct: 176 FKREGKGER 184 Score = 60.5 bits (145), Expect = 3e-08 Identities = 44/195 (22%), Positives = 94/195 (48%), Gaps = 2/195 (1%) Frame = +2 Query: 551 ANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGES-KGYGFVQYEQDESAQNAIN 727 A I++ NLD+ + + L++ G +++ + + S G+GF ++ ++ + A Sbjct: 11 ATIYLGNLDEKVTDSILFELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHEQDVEYACQ 70 Query: 728 ELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPIT 907 LN + L K + V + + + G+ N++V NL E L + F G + Sbjct: 71 ILNQVKLFGKPIRVNRASQDRGVNTLIGA----NLFVGNLDPLVDERVLYDTFSALGQLV 126 Query: 908 SVI-VVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLK 1084 V R ++G+S+ +GFV++++ + A A+E +N + +K + V A K+ + + Sbjct: 127 KAPQVARDENGRSKGYGFVSYDSFETADAAIEAMNNQFLMNKPITVSYAFKREGKGERHG 186 Query: 1085 ESFEKSNKETADRNQ 1129 + E+ A +N+ Sbjct: 187 DIAERKLAAAAKKNK 201 Score = 40.0 bits (92), Expect = 0.043 Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 1/85 (1%) Frame = +2 Query: 1118 DRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDS-NGVNKGSGFVAFKSSED 1294 DRNQ +YL NLD V D L EL + G + + + RD + G GF F +D Sbjct: 6 DRNQDATIYLGNLDEKV-TDSILFELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHEQD 64 Query: 1295 ATRALVAMNGKMVGSKPLYVALAQR 1369 A +N + KP+ V A + Sbjct: 65 VEYACQILNQVKLFGKPIRVNRASQ 89
>Q15427:SF3B4_HUMAN Splicing factor 3B subunit 4 - Homo sapiens (Human)| Length = 424 Score = 111 bits (278), Expect = 1e-23 Identities = 74/206 (35%), Positives = 112/206 (54%), Gaps = 3/206 (1%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 +YVG LD V + L+++F Q G VV+ + +D T GY +V F S DA A++++ Sbjct: 15 VYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIM 74 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSC-KVA 649 N + GKPIR+ ++ + G ANIFI NLD ID K LYDTFSAFG IL K+ Sbjct: 75 NMIKLYGKPIRVNKASAHNKNLDVG-ANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIM 133 Query: 650 TEM-SGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFN 826 + +G SKGY F+ + +++ AI +NG L ++ + V +K + GS Sbjct: 134 RDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAER 193 Query: 827 NVYVKN-LSESTTEDNLKELFGNFGP 901 + +N LS++ D +LF + P Sbjct: 194 LLAAQNPLSQA---DRPHQLFADAPP 216 Score = 77.8 bits (190), Expect = 2e-13 Identities = 56/190 (29%), Positives = 100/190 (52%), Gaps = 3/190 (1%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVHAVEDL 1006 VYV L E +E L ELF GP+ + + + G+ + +GFV F + +DA +A++ + Sbjct: 15 VYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIM 74 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 N K K + V +A ++ + + G N+++ NLD +D+ + L Sbjct: 75 NMIKLYGKPIRVNKASAHNK-----------------NLDVGANIFIGNLDPEIDE-KLL 116 Query: 1187 KELFAEFGTITSC-KVMRDSN-GVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVAL 1360 + F+ FG I K+MRD + G +KG F+ F S + + A+ AMNG+ + ++P+ V+ Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSY 176 Query: 1361 AQRKEERRAR 1390 A +K+ + R Sbjct: 177 AFKKDSKGER 186
>P70372:ELAV1_MOUSE ELAV-like protein 1 - Mus musculus (Mouse)| Length = 326 Score = 110 bits (274), Expect = 3e-23 Identities = 84/307 (27%), Positives = 143/307 (46%), Gaps = 48/307 (15%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L V L ++ +L +FS +G V S ++ RD SLGY +VN+ + DA RA+ L Sbjct: 22 LIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTL 81 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 N + K I++ Y+ PSS AN++I L +++ K + D FS FG I++ +V Sbjct: 82 NGLRLQSKTIKVSYAR--PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLV 139 Query: 653 EM-SGESKGYGFVQYEQDESAQNAI-----------------------NELNGMLL---- 748 + +G S+G F+++++ A+ AI N+ M L Sbjct: 140 DQTTGLSRGVAFIRFDKRSEAEEAITSFIGHKPPGSSEPITVKFAANPNQNKNMALLSQL 199 Query: 749 --NDKKVYVGPFVRKQER--------ENVFGSPKFN---------NVYVKNLSESTTEDN 871 + + + GP + +R +++ G N +++ NL + E Sbjct: 200 YHSPARRFGGPVHHQAQRFRFSPMGVDHMSGISGVNVPGNASSGWCIFIYNLGQDADEGI 259 Query: 872 LKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGR 1048 L ++FG FG +T+V V+R + K + FGFV N +++ A+ LNG + DK L V Sbjct: 260 LWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEESAMAIASLNGYRLGDKILQVSF 319 Query: 1049 AQKKSER 1069 KS + Sbjct: 320 KTNKSHK 326 Score = 97.4 bits (241), Expect = 2e-19 Identities = 81/316 (25%), Positives = 139/316 (43%), Gaps = 37/316 (11%) Frame = +2 Query: 545 GAANIFIKNLDKSIDNKALYDTFSAFGNILSCK-VATEMSGESKGYGFVQYEQDESAQNA 721 G N+ + L +++ + L FS+ G + S K + +++G S GYGFV Y + A+ A Sbjct: 18 GRTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERA 77 Query: 722 INELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGP 901 I+ LNG+ L K + V + E + K N+Y+ L + T+ +++++F FG Sbjct: 78 ISTLNGLRLQSKTIKVS--YARPSSEVI----KDANLYISGLPRTMTQKDVEDMFSRFGR 131 Query: 902 -ITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDD----------------- 1027 I S ++V G SR F+ F+ +A A+ G K Sbjct: 132 IINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFIGHKPPGSSEPITVKFAANPNQNK 191 Query: 1028 -----KELYVGRAQKKSEREMQLKESFEKSN------------KETADRNQGTNLYLKNL 1156 +LY A++ + F S + + G +++ NL Sbjct: 192 NMALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHMSGISGVNVPGNASSGWCIFIYNL 251 Query: 1157 DGSVDDDEKLKELFAEFGTITSCKVMRDSN-GVNKGSGFVAFKSSEDATRALVAMNGKMV 1333 G D+ L ++F FG +T+ KV+RD N KG GFV + E++ A+ ++NG + Sbjct: 252 -GQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEESAMAIASLNGYRL 310 Query: 1334 GSKPLYVALAQRKEER 1381 G K L V+ K + Sbjct: 311 GDKILQVSFKTNKSHK 326 Score = 68.6 bits (166), Expect = 1e-10 Identities = 49/190 (25%), Positives = 92/190 (48%), Gaps = 4/190 (2%) Frame = +2 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVHAVED 1003 N+ V L ++ T++ L+ LF + G + S ++R G S +GFVN+ DA A+ Sbjct: 21 NLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIST 80 Query: 1004 LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEK 1183 LNG + K + V A+ SE +K++ NLY+ L ++ + Sbjct: 81 LNGLRLQSKTIKVSYARPSSE---VIKDA---------------NLYISGLPRTMTQKD- 121 Query: 1184 LKELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATRALVAMNGKMV--GSKPLYV 1354 ++++F+ FG I + +V+ D + G+++G F+ F +A A+ + G S+P+ V Sbjct: 122 VEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFIGHKPPGSSEPITV 181 Query: 1355 ALAQRKEERR 1384 A + + Sbjct: 182 KFAANPNQNK 191
>Q09442:SF3B4_CAEEL Splicing factor 3B subunit 4 - Caenorhabditis elegans| Length = 388 Score = 108 bits (270), Expect = 1e-22 Identities = 62/176 (35%), Positives = 100/176 (56%), Gaps = 2/176 (1%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 +YVG LD V ++ L+++ Q G VVSV + +D T G+ +V F DA A+++L Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSC-KVA 649 N + GKPI++ ++ + G ANIF+ NLD +D K LYDTFSAFG IL K+ Sbjct: 75 NMIKLYGKPIKVNKASAHEKNMDVG-ANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIM 133 Query: 650 TEM-SGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGS 814 ++ SG SKG+ F+ + E++ A+ +NG L ++ + V ++ + G+ Sbjct: 134 RDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKRDSKGERHGT 189 Score = 80.5 bits (197), Expect = 3e-14 Identities = 79/278 (28%), Positives = 116/278 (41%), Gaps = 23/278 (8%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVHAVEDL 1006 +YV L E +E L EL GP+ SV + + + FGFV F +DA +A++ L Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 N K K + V +A E+ M + G N+++ NLD VD+ + L Sbjct: 75 NMIKLYGKPIKVNKASAH-EKNMDV----------------GANIFVGNLDPEVDE-KLL 116 Query: 1187 KELFAEFGTITSC-KVMRD-SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVAL 1360 + F+ FG I K+MRD +G +KG F+ F S E + AL AMNG+ + ++ + V+ Sbjct: 117 YDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSY 176 Query: 1361 AQRKEERRAR--------LQAQ------------FSQXXXXXXXXXXXXXXXXXXXXXXX 1480 A +++ + R L AQ FS Sbjct: 177 AFKRDSKGERHGTAAERMLAAQNPLFPKDRPHQVFSDVPLGVPANTPLAMPGVHAAIAAH 236 Query: 1481 XQQLFYGQPPPAFVNPQPGYGFQQHMIPGMRPGVAPMP 1594 QPPP Q GY Q +P P V PMP Sbjct: 237 ATGRPGYQPPPLMGMAQSGYQGQYPPVPPPPPSVTPMP 274
>P26378:ELAV4_HUMAN ELAV-like protein 4 - Homo sapiens (Human)| Length = 380 Score = 106 bits (265), Expect = 4e-22 Identities = 82/334 (24%), Positives = 144/334 (43%), Gaps = 75/334 (22%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L V L ++ + +F +G + S ++ RD T SLGY +VN+ P DA +A+ L Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKV-A 649 N + K I++ Y+ PSS AN+++ L K++ K L FS +G I++ ++ Sbjct: 108 NGLRLQTKTIKVSYAR--PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILV 165 Query: 650 TEMSGESKGYGFVQYEQDESAQNAINELNG-----------------------------M 742 +++G S+G GF+++++ A+ AI LNG + Sbjct: 166 DQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL 225 Query: 743 LLNDKKVYVGPFVRKQER---ENVFG------------------SPKFNNVYVKNLSE-- 853 + + Y GP + +R +N+ SP+F+ + + ++ Sbjct: 226 YQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVKRLMSGPVPPSACSPRFSPITIDGMTSLV 285 Query: 854 ---------------------STTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVNF 967 + E L +LFG FG + +V V+R + K + FGFV Sbjct: 286 GMNIPGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTM 345 Query: 968 ENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSER 1069 N D+A A+ LNG + D+ L V K+ + Sbjct: 346 TNYDEAAMAIASLNGYRLGDRVLQVSFKTNKAHK 379 Score = 95.1 bits (235), Expect = 1e-18 Identities = 95/359 (26%), Positives = 155/359 (43%), Gaps = 70/359 (19%) Frame = +2 Query: 515 SNRD-PSSRKSGAA------NIFIKNLDKSIDNKALYDTFSAFGNILSCK-VATEMSGES 670 +NR+ PS ++GA N+ + L +++ + F + G I SCK V +++G+S Sbjct: 27 NNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQS 86 Query: 671 KGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLS 850 GYGFV Y + A+ AIN LNG+ L K + V + R S + N+YV L Sbjct: 87 LGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVS-YARPSS-----ASIRDANLYVSGLP 140 Query: 851 ESTTEDNLKELFGNFGP-ITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFD- 1024 ++ T+ L++LF +G ITS I+V G SR GF+ F+ +A A++ LNG+K Sbjct: 141 KTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSG 200 Query: 1025 -DKELYVGRAQKKSEREMQ--LKESFEKSNKETAD--RNQGTNLYLKNL----------- 1156 + + V A S++ Q L + ++ N+ +Q L NL Sbjct: 201 ATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVKRLM 260 Query: 1157 ------------------DG----------------------SVDDDEKLKELFAEFG-- 1210 DG ++ D L+ FG Sbjct: 261 SGPVPPSACSPRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSPDSDESVLWQLFGPF 320 Query: 1211 -TITSCKVMRDSN-GVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEER 1381 + + KV+RD N KG GFV + ++A A+ ++NG +G + L V+ K + Sbjct: 321 GAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKAHK 379 Score = 78.6 bits (192), Expect = 1e-13 Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 4/199 (2%) Frame = +2 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVHAVED 1003 N+ V L ++ T++ + LFG+ G I S +VR G+S +GFVN+ +P DA A+ Sbjct: 47 NLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINT 106 Query: 1004 LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEK 1183 LNG + K + V A+ S + NLY+ L ++ E Sbjct: 107 LNGLRLQTKTIKVSYARPSSA------------------SIRDANLYVSGLPKTMTQKE- 147 Query: 1184 LKELFAEFGTITSCKVMRDS-NGVNKGSGFVAFKSSEDATRALVAMNGKMV--GSKPLYV 1354 L++LF+++G I + +++ D GV++G GF+ F +A A+ +NG+ ++P+ V Sbjct: 148 LEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITV 207 Query: 1355 ALAQRKEERRARLQAQFSQ 1411 A ++ + QA SQ Sbjct: 208 KFANNPSQKSS--QALLSQ 224
>Q01085:TIAR_HUMAN Nucleolysin TIAR - Homo sapiens (Human)| Length = 375 Score = 103 bits (256), Expect = 4e-21 Identities = 73/260 (28%), Positives = 121/260 (46%), Gaps = 20/260 (7%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LYVG+L V + + +FSQ+G S ++ + + Y +V F DAA AL + Sbjct: 11 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDP--YCFVEFYEHRDAAAALAAM 68 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAAN---IFIKNLDKSIDNKALYDTFSAFGNILSCK 643 N + GK +++ ++ PSS+K +N +F+ +L I + + F+ FG I + Sbjct: 69 NGRKILGKEVKVNWAT-TPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDAR 127 Query: 644 VATEM-SGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVG-----PFVRKQERENV 805 V +M +G+SKGYGFV + A+NAI + G L +++ P K +EN Sbjct: 128 VVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENN 187 Query: 806 F-----------GSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCF 952 SPK VY ++ T+ +++ F FG I + V + + Sbjct: 188 TKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVF-----PEKGY 242 Query: 953 GFVNFENPDDAVHAVEDLNG 1012 FV F + A HA+ +NG Sbjct: 243 SFVRFSTHESAAHAIVSVNG 262 Score = 95.9 bits (237), Expect = 7e-19 Identities = 74/270 (27%), Positives = 132/270 (48%), Gaps = 11/270 (4%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 +++ NL + + + FS G SCK+ TE + Y FV++ + A A+ +N Sbjct: 11 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDP-YCFVEFYEHRDAAAALAAMN 69 Query: 737 GMLLNDKKVYVG----PFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPI 904 G + K+V V P +K++ N F +V+V +LS T +++K F FG I Sbjct: 70 GRKILGKEVKVNWATTPSSQKKDTSNHF------HVFVGDLSPEITTEDIKSAFAPFGKI 123 Query: 905 TSVIVVR-ADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQK-----KSE 1066 + VV+ GKS+ +GFV+F N DA +A+ + G+ +++ A + KS Sbjct: 124 SDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKST 183 Query: 1067 REMQLKE-SFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDS 1243 +E K+ FE +++ +N +Y + + D+ +++ F+ FG I +V + Sbjct: 184 QENNTKQLRFEDVVNQSSPKN--CTVYCGGIASGL-TDQLMRQTFSPFGQIMEIRVFPE- 239 Query: 1244 NGVNKGSGFVAFKSSEDATRALVAMNGKMV 1333 KG FV F + E A A+V++NG + Sbjct: 240 ----KGYSFVRFSTHESAAHAIVSVNGTTI 265 Score = 75.5 bits (184), Expect = 9e-13 Identities = 55/189 (29%), Positives = 92/189 (48%), Gaps = 1/189 (0%) Frame = +2 Query: 809 GSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAV 988 G P+ +YV NLS TE + +LF GP S ++ + + + FV F DA Sbjct: 6 GQPR--TLYVGNLSRDVTEVLILQLFSQIGPCKSCKMI-TEHTSNDPYCFVEFYEHRDAA 62 Query: 989 HAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSV 1168 A+ +NG+K KE+ V A S ++ F ++++ +L + Sbjct: 63 AALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHF--------------HVFVGDLSPEI 108 Query: 1169 DDDEKLKELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKP 1345 ++ +K FA FG I+ +V++D + G +KG GFV+F + DA A+V M G+ +G + Sbjct: 109 TTED-IKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 167 Query: 1346 LYVALAQRK 1372 + A RK Sbjct: 168 IRTNWATRK 176 Score = 72.8 bits (177), Expect = 6e-12 Identities = 56/219 (25%), Positives = 95/219 (43%), Gaps = 35/219 (15%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 ++VGDL + + F+ G + RV +D+ T S GY +V+F + DA A+ + Sbjct: 99 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 158 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAAN--------------------IFIKNLDKSIDN 592 + G+ IR ++ R P + KS N ++ + + + Sbjct: 159 GGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTD 218 Query: 593 KALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDK--KVY 766 + + TFS FG I+ +V E KGY FV++ ESA +AI +NG + K Y Sbjct: 219 QLMRQTFSPFGQIMEIRVFPE-----KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCY 273 Query: 767 VG---PFVRKQERE----------NVFGSPKFNNVYVKN 844 G P + K ++ V+G+P+ Y+ N Sbjct: 274 WGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMAN 312
>P20397:NUCL_XENLA Nucleolin - Xenopus laevis (African clawed frog)| Length = 651 Score = 101 bits (252), Expect = 1e-20 Identities = 83/358 (23%), Positives = 166/358 (46%), Gaps = 8/358 (2%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 +++G+L+ + + +L D + S ++ + +D+ S + YV+FSS + +AL++ Sbjct: 235 IFIGNLNSTKEFDELKDALREFFSKKNLTI-QDIRIGNSKKFGYVDFSSEEEVEKALKLT 293 Query: 473 NF----TPVNGKPIRIMYSNRDPSSRKS-GAANIFIKNLDKSIDNKALYDTFSAFGNILS 637 T V + N+ ++K + +F+KN+ S + L + F N Sbjct: 294 GKKILGTEVKIEKAMAFDKNKTAENKKERDSRTLFVKNIPYSTTVEELQEIFE---NAKD 350 Query: 638 CKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSP 817 ++ T G +KG +V++ ++ A A+ E G + + ++V K + P Sbjct: 351 IRIPTGKDGSNKGIAYVEFSNEDEANKALEEKQGAEIEGRSIFVDFTGEKSQNSGNKKGP 410 Query: 818 KFNN--VYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVH 991 + ++ + V NLS S TED+L+E+F + I + + G+++ F F+ F + +DA Sbjct: 411 EGDSKVLVVNNLSYSATEDSLREVFEK----ATSIRIPQNQGRAKGFAFIEFSSAEDAKD 466 Query: 992 AVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVD 1171 A++ N + + + + ++ + Q L+++ L Sbjct: 467 AMDSCNNTEIEGRSI-----------RLEFSQGGGPQGGGRGGSAQSKTLFVRGLSEDTT 515 Query: 1172 DDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAM-NGKMVGSK 1342 + E LKE F G++ + V G +KG GFV F ++EDA A AM +G++ G+K Sbjct: 516 E-ETLKEAFD--GSVNARIVTDRDTGASKGFGFVDFSTAEDAKAAKEAMEDGEIDGNK 570 Score = 83.6 bits (205), Expect = 3e-15 Identities = 68/272 (25%), Positives = 125/272 (45%), Gaps = 12/272 (4%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L+V ++ S +L ++F + + +D + + G AYV FS+ +A +ALE Sbjct: 327 LFVKNIPYSTTVEELQEIFENAKDI-RIPTGKDGSNK---GIAYVEFSNEDEANKALEEK 382 Query: 473 NFTPVNGKPIRIMYSNRDP--SSRKSGAAN----IFIKNLDKSIDNKALYDTFSAFGNIL 634 + G+ I + ++ S K G + + NL S +L + F +I Sbjct: 383 QGAEIEGRSIFVDFTGEKSQNSGNKKGPEGDSKVLVVNNLSYSATEDSLREVFEKATSIR 442 Query: 635 SCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYV------GPFVRKQER 796 + G +KG+ F+++ E A++A++ N + + + + GP + Sbjct: 443 ----IPQNQGRAKGFAFIEFSSAEDAKDAMDSCNNTEIEGRSIRLEFSQGGGP-----QG 493 Query: 797 ENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENP 976 GS + ++V+ LSE TTE+ LKE F G + + IV D G S+ FGFV+F Sbjct: 494 GGRGGSAQSKTLFVRGLSEDTTEETLKEAFD--GSVNARIVTDRDTGASKGFGFVDFSTA 551 Query: 977 DDAVHAVEDLNGKKFDDKELYVGRAQKKSERE 1072 +DA A E + + D ++ + A+ K + + Sbjct: 552 EDAKAAKEAMEDGEIDGNKVTLDFAKPKGDSQ 583
>P08199:NUCL_MESAU Nucleolin - Mesocricetus auratus (Golden hamster)| Length = 714 Score = 101 bits (252), Expect = 1e-20 Identities = 95/356 (26%), Positives = 166/356 (46%), Gaps = 6/356 (1%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++G+L+ + A+L S+ + + V DV T + + YV+F S D +ALE+ Sbjct: 310 LFIGNLNPNKSVAELKVAISEPFAKNDLAVV-DVRTGTNRKFGYVDFESAEDLEKALELT 368 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 V G I++ S + A + KNL +I L + F + L ++ + Sbjct: 369 GLK-VFGNEIKLEKPKGRDSKKVRAARTLLAKNLSFNITEDELKEVFE---DALEIRLVS 424 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKV---YVGPFVRKQER--ENVFGSP 817 + G+SKG +++++ + A+ + E G ++ + V Y G ++QER +N S Sbjct: 425 Q-DGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEKGQRQERTGKNSTWSG 483 Query: 818 KFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAV 997 + + + NLS S TE+ L+E+F T + V + GKS+ + F+ F + +DA A+ Sbjct: 484 ESKTLVLSNLSYSATEETLQEVFEK---ATFIKVPQNQQGKSKGYAFIEFASFEDAKEAL 540 Query: 998 EDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDD 1177 N + + + + R + + R A L++K L + Sbjct: 541 NSCNKMEIEGRTI---RLELQGPR-----------GSPNARSQPSKTLFVKGLSEDTTE- 585 Query: 1178 EKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAM-NGKMVGSK 1342 E LKE F G++ + V G +KG GFV F S EDA A AM +G++ G+K Sbjct: 586 ETLKESFE--GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNK 639 Score = 95.9 bits (237), Expect = 7e-19 Identities = 68/234 (29%), Positives = 110/234 (47%), Gaps = 14/234 (5%) Frame = +2 Query: 407 SLGYAYVNFSSPADAARALEMLNFTPVNGKPIRIMYSNRDPSSRKSGAAN---------I 559 S G AY+ F S ADA + LE ++G+ + + Y+ ++ N + Sbjct: 429 SKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEKGQRQERTGKNSTWSGESKTL 488 Query: 560 FIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNG 739 + NL S + L + F I KV G+SKGY F+++ E A+ A+N N Sbjct: 489 VLSNLSYSATEETLQEVFEKATFI---KVPQNQQGKSKGYAFIEFASFEDAKEALNSCNK 545 Query: 740 MLLNDKKVYVGPFVRKQERENVFGSPKFNN-----VYVKNLSESTTEDNLKELFGNFGPI 904 M + + + + E + GSP + ++VK LSE TTE+ LKE F G + Sbjct: 546 MEIEGRTI-------RLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFE--GSV 596 Query: 905 TSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSE 1066 + IV + G S+ FGFV+F + +DA A E + + D ++ + A+ K E Sbjct: 597 RARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGE 650 Score = 82.4 bits (202), Expect = 8e-15 Identities = 77/287 (26%), Positives = 133/287 (46%), Gaps = 6/287 (2%) Frame = +2 Query: 554 NIFIKNLDKSIDNKALYDTFSAFGNILS---CKVATEMSGESKGYGFVQYEQDESAQNAI 724 N+FI NL+ NK++ + A + V +G ++ +G+V +E E + A+ Sbjct: 309 NLFIGNLNP---NKSVAELKVAISEPFAKNDLAVVDVRTGTNRKFGYVDFESAEDLEKAL 365 Query: 725 NELNGMLLNDKKVYVGPFVRKQERENVFGSPKFN---NVYVKNLSESTTEDNLKELFGNF 895 EL G+ + ++ K E+ S K + KNLS + TED LKE+F + Sbjct: 366 -ELTGLKVFGNEI-------KLEKPKGRDSKKVRAARTLLAKNLSFNITEDELKEVFEDA 417 Query: 896 GPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREM 1075 I V + DGKS+ ++ F++ DA +E+ G + D + + + +K +R+ Sbjct: 418 LEIRLV----SQDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEKGQRQ- 472 Query: 1076 QLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVN 1255 E++ K + + L L NL S + E L+E+F + T KV ++ G + Sbjct: 473 ------ERTGKNSTWSGESKTLVLSNLSYSATE-ETLQEVFEK---ATFIKVPQNQQGKS 522 Query: 1256 KGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRARLQ 1396 KG F+ F S EDA AL + N + + + + L + AR Q Sbjct: 523 KGYAFIEFASFEDAKEALNSCNKMEIEGRTIRLELQGPRGSPNARSQ 569
>P15771:NUCL_CHICK Nucleolin - Gallus gallus (Chicken)| Length = 694 Score = 101 bits (251), Expect = 2e-20 Identities = 77/268 (28%), Positives = 131/268 (48%), Gaps = 10/268 (3%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L+V +L V + ++ +VF + + VR+ + S G AY+ F + A+A +ALE Sbjct: 373 LFVKNLPYRVTEDEMKNVFE---NALEVRLVLN-KEGSSKGMAYIEFKTEAEAEKALEEK 428 Query: 473 NFTPVNGKPIRIMYSNR--DPSSRKSG----AANIFIKNLDKSIDNKALYDTFSAFGNIL 634 T V+G+ + I Y+ S+K G + + + NL + + L + F Sbjct: 429 QGTEVDGRAMVIDYTGEKSQQESQKGGGERESKTLIVNNLSYAASEETLQELFK---KAT 485 Query: 635 SCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGS 814 S K+ G KGY FV++ E A+ A+N N + + + + ++ N+ Sbjct: 486 SIKMPQNNQGRPKGYAFVEFPTAEDAKEALNSCNNTEIEGRAIRLEFSSPSWQKGNMNAR 545 Query: 815 PKFNN----VYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDD 982 FN ++V+ LSE TTE+ L+E F G I++ IV D G S+ FGFV+F +P+D Sbjct: 546 GGFNQQSKTLFVRGLSEDTTEETLRESFE--GSISARIVTDRDTGSSKGFGFVDFSSPED 603 Query: 983 AVHAVEDLNGKKFDDKELYVGRAQKKSE 1066 A A E + + D ++ + A+ K E Sbjct: 604 AKAAKEAMEDGEIDGNKVTLDFAKPKGE 631 Score = 95.9 bits (237), Expect = 7e-19 Identities = 82/326 (25%), Positives = 154/326 (47%), Gaps = 8/326 (2%) Frame = +2 Query: 389 DVNTRMSLGYAYVNFSSPADAARALEMLNFTPVNGKPIRIMYSNRDPSSRKS----GAAN 556 +V S + YV+F S D +AL+ LN + G I++ + S +++ A Sbjct: 314 EVRIGSSKRFGYVDFLSAEDMDKALQ-LNGKKLMGLEIKLEKAKSKESLKENKKERDART 372 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 +F+KNL + + + F N L ++ G SKG +++++ + A+ A+ E Sbjct: 373 LFVKNLPYRVTEDEMKNVFE---NALEVRLVLNKEGSSKGMAYIEFKTEAEAEKALEEKQ 429 Query: 737 GMLLNDKKVYVGPFVRK--QERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITS 910 G ++ + + + K QE + G + + V NLS + +E+ L+ELF TS Sbjct: 430 GTEVDGRAMVIDYTGEKSQQESQKGGGERESKTLIVNNLSYAASEETLQELFKK---ATS 486 Query: 911 VIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSER-EMQLKE 1087 + + + + G+ + + FV F +DA A+ N + + + + + + ++ M + Sbjct: 487 IKMPQNNQGRPKGYAFVEFPTAEDAKEALNSCNNTEIEGRAIRLEFSSPSWQKGNMNARG 546 Query: 1088 SFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSG 1267 F + +K L+++ L + E L+E F G+I++ V G +KG G Sbjct: 547 GFNQQSK---------TLFVRGLSEDTTE-ETLRESFE--GSISARIVTDRDTGSSKGFG 594 Query: 1268 FVAFKSSEDATRALVAM-NGKMVGSK 1342 FV F S EDA A AM +G++ G+K Sbjct: 595 FVDFSSPEDAKAAKEAMEDGEIDGNK 620 Score = 90.1 bits (222), Expect = 4e-17 Identities = 76/292 (26%), Positives = 136/292 (46%), Gaps = 6/292 (2%) Frame = +2 Query: 491 GKPIRIMYSNRDPSSRK------SGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 GK + M + P ++K + A ++F+KNL + D + L F + +V+ Sbjct: 255 GKRKKEMANKSAPEAKKKKTETPASAFSLFVKNLTPTKDYEELRTAIKEFFGKKNLQVSE 314 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNV 832 G SK +G+V + E A+ +LNG L ++ + K+ + + Sbjct: 315 VRIGSSKRFGYVDFLSAEDMDKAL-QLNGKKLMGLEIKLEKAKSKESLKENKKERDARTL 373 Query: 833 YVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNG 1012 +VKNL TED +K +F N V +V +G S+ ++ F+ +A A+E+ G Sbjct: 374 FVKNLPYRVTEDEMKNVFEN---ALEVRLVLNKEGSSKGMAYIEFKTEAEAEKALEEKQG 430 Query: 1013 KKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKE 1192 + D + + + +KS++E Q K E+ +K L + NL + +E L+E Sbjct: 431 TEVDGRAMVIDYTGEKSQQESQ-KGGGERESK---------TLIVNNLSYAA-SEETLQE 479 Query: 1193 LFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPL 1348 LF + TS K+ +++ G KG FV F ++EDA AL + N + + + Sbjct: 480 LFKK---ATSIKMPQNNQGRPKGYAFVEFPTAEDAKEALNSCNNTEIEGRAI 528 Score = 64.3 bits (155), Expect = 2e-09 Identities = 54/232 (23%), Positives = 108/232 (46%) Frame = +2 Query: 695 EQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNL 874 E++ + + E G + P +K++ E + +++VKNL+ + + L Sbjct: 241 EEESEDEKPVKEAPGKRKKEMANKSAPEAKKKKTETPASA---FSLFVKNLTPTKDYEEL 297 Query: 875 KELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQ 1054 + F ++ V G S+ FG+V+F + +D A++ LNGKK E+ + +A+ Sbjct: 298 RTAIKEFFGKKNLQVSEVRIGSSKRFGYVDFLSAEDMDKALQ-LNGKKLMGLEIKLEKAK 356 Query: 1055 KKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVM 1234 K ES +++ KE R L++KNL V +DE +K +F +++ Sbjct: 357 SK--------ESLKENKKERDART----LFVKNLPYRVTEDE-MKNVFEN---ALEVRLV 400 Query: 1235 RDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRAR 1390 + G +KG ++ FK+ +A +AL G V + + + K ++ ++ Sbjct: 401 LNKEGSSKGMAYIEFKTEAEAEKALEEKQGTEVDGRAMVIDYTGEKSQQESQ 452 Score = 37.4 bits (85), Expect = 0.28 Identities = 24/85 (28%), Positives = 42/85 (49%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L+V L + L + F GS+ S R+ D +T S G+ +V+FSSP DA A E + Sbjct: 555 LFVRGLSEDTTEETLRESFE--GSI-SARIVTDRDTGSSKGFGFVDFSSPEDAKAAKEAM 611 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSG 547 ++G + + ++ ++ G Sbjct: 612 EDGEIDGNKVTLDFAKPKGEFQRGG 636
>O60176:YG41_SCHPO Uncharacterized RNA-binding protein C23E6.01c - Schizosaccharomyces| pombe (Fission yeast) Length = 473 Score = 100 bits (250), Expect = 2e-20 Identities = 76/273 (27%), Positives = 138/273 (50%), Gaps = 33/273 (12%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++G+L+ V +A + V++ +G V V++ R+ T M+ GY +V F+SP +A+ A+ M Sbjct: 95 LWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASPHEASSAMSM- 153 Query: 473 NFTPVNGKP--IRIMYSN----RDPSSRKSGAANIFIKNLDKSIDNKALYDTF-SAFGNI 631 N P+ G ++ +++ R+ S K+ +IF+ +L +++ +Y F S + + Sbjct: 154 NNKPIPGTNHLFKLNWASGGGLREKSISKASEYSIFVGDLSPNVNEFDVYSLFASRYNSC 213 Query: 632 LSCKVATE-MSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVF 808 S K+ T+ + S+GYGFV++ + ++A+ E+ G + D+ + VG + + +VF Sbjct: 214 KSAKIMTDPQTNVSRGYGFVRFTDENDQKSALAEMQGQICGDRPIRVG-LATPKSKAHVF 272 Query: 809 GS--------------------PKF-----NNVYVKNLSESTTEDNLKELFGNFGPITSV 913 P+F + V+V LS+ +E+ LK LF NFG + Sbjct: 273 SPVNVVPVSMPPVGFYSAAQPVPQFADTANSTVFVGGLSKFVSEEELKYLFQNFG---EI 329 Query: 914 IVVRADDGKSRCFGFVNFENPDDAVHAVEDLNG 1012 + V+ GK GFV F N A A+ L G Sbjct: 330 VYVKIPPGKG--CGFVQFVNRQSAEIAINQLQG 360 Score = 70.9 bits (172), Expect = 2e-11 Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 29/218 (13%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVF-SQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEM 469 ++VGDL +V + ++ +F S+ S S ++ D T +S GY +V F+ D AL Sbjct: 188 IFVGDLSPNVNEFDVYSLFASRYNSCKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALAE 247 Query: 470 LN----------------------FTPVNGKPIRI----MYSNRDPSSRKSGAAN--IFI 565 + F+PVN P+ + YS P + + AN +F+ Sbjct: 248 MQGQICGDRPIRVGLATPKSKAHVFSPVNVVPVSMPPVGFYSAAQPVPQFADTANSTVFV 307 Query: 566 KNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGML 745 L K + + L F FG I+ K+ KG GFVQ+ +SA+ AIN+L G Sbjct: 308 GGLSKFVSEEELKYLFQNFGEIVYVKIPP-----GKGCGFVQFVNRQSAEIAINQLQGYP 362 Query: 746 LNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSEST 859 L + ++ + +N +P N Y +S++T Sbjct: 363 LGNSRIRLS----WGRNQNPIAAPALN--YQSQVSQTT 394
>P70318:TIAR_MOUSE Nucleolysin TIAR - Mus musculus (Mouse)| Length = 392 Score = 100 bits (250), Expect = 2e-20 Identities = 78/275 (28%), Positives = 126/275 (45%), Gaps = 35/275 (12%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRV------CRDVNTRMSLG---------YAYV 427 LYVG+L V + + +FSQ+G S ++ R VN+ + Y +V Sbjct: 11 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFV 70 Query: 428 NFSSPADAARALEMLNFTPVNGKPIRIMYSNRDPSSRKSGAAN---IFIKNLDKSIDNKA 598 F DAA AL +N + GK +++ ++ PSS+K +N +F+ +L I + Sbjct: 71 EFYEHRDAAAALAAMNGRKILGKEVKVNWAT-TPSSQKKDTSNHFHVFVGDLSPEITTED 129 Query: 599 LYDTFSAFGNILSCKVATEM-SGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGP 775 + F+ FG I +V +M +G+SKGYGFV + A+NAI + G L +++ Sbjct: 130 IKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNW 189 Query: 776 FVRK-------QER-------ENVF--GSPKFNNVYVKNLSESTTEDNLKELFGNFGPIT 907 RK QE E+V SPK VY ++ T+ +++ F FG I Sbjct: 190 ATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIM 249 Query: 908 SVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNG 1012 + V + + FV F + A HA+ +NG Sbjct: 250 EIRVF-----PEKGYSFVRFSTHESAAHAIVSVNG 279 Score = 90.1 bits (222), Expect = 4e-17 Identities = 74/286 (25%), Positives = 132/286 (46%), Gaps = 27/286 (9%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESK----------------GYGFV 688 +++ NL + + + FS G SCK+ TE + Y FV Sbjct: 11 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFV 70 Query: 689 QYEQDESAQNAINELNGMLLNDKKVYVG----PFVRKQERENVFGSPKFNNVYVKNLSES 856 ++ + A A+ +NG + K+V V P +K++ N F +V+V +LS Sbjct: 71 EFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHF------HVFVGDLSPE 124 Query: 857 TTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKE 1033 T +++K F FG I+ VV+ GKS+ +GFV+F N DA +A+ + G+ ++ Sbjct: 125 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 184 Query: 1034 LYVGRAQK-----KSEREMQLKE-SFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKEL 1195 + A + KS +E K+ FE +++ +N +Y + + D+ +++ Sbjct: 185 IRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKN--CTVYCGGIASGL-TDQLMRQT 241 Query: 1196 FAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMV 1333 F+ FG I +V + KG FV F + E A A+V++NG + Sbjct: 242 FSPFGQIMEIRVFPE-----KGYSFVRFSTHESAAHAIVSVNGTTI 282 Score = 71.2 bits (173), Expect = 2e-11 Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 17/205 (8%) Frame = +2 Query: 809 GSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRC------------- 949 G P+ +YV NLS TE + +LF GP S ++ R Sbjct: 6 GQPR--TLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTS 63 Query: 950 ---FGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETAD 1120 + FV F DA A+ +NG+K KE+ V A S ++ F Sbjct: 64 NDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHF--------- 114 Query: 1121 RNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDA 1297 ++++ +L + ++ +K FA FG I+ +V++D + G +KG GFV+F + DA Sbjct: 115 -----HVFVGDLSPEITTED-IKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 168 Query: 1298 TRALVAMNGKMVGSKPLYVALAQRK 1372 A+V M G+ +G + + A RK Sbjct: 169 ENAIVHMGGQWLGGRQIRTNWATRK 193 Score = 70.9 bits (172), Expect = 2e-11 Identities = 55/219 (25%), Positives = 94/219 (42%), Gaps = 35/219 (15%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 ++VGDL + + F+ G + RV +D+ T S GY +V+F + DA A+ + Sbjct: 116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 175 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGA--------------------ANIFIKNLDKSIDN 592 + G+ IR ++ R P + KS ++ + + + Sbjct: 176 GGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTD 235 Query: 593 KALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDK--KVY 766 + + TFS FG I+ +V E KGY FV++ ESA +AI +NG + K Y Sbjct: 236 QLMRQTFSPFGQIMEIRVFPE-----KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCY 290 Query: 767 VG---PFVRKQERE----------NVFGSPKFNNVYVKN 844 G P + K ++ V+G+P+ Y+ N Sbjct: 291 WGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMAN 329
>P13383:NUCL_RAT Nucleolin - Rattus norvegicus (Rat)| Length = 713 Score = 99.0 bits (245), Expect = 8e-20 Identities = 93/356 (26%), Positives = 165/356 (46%), Gaps = 6/356 (1%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++G+L+ + A+L S++ + + DV T + + YV+F S D +ALE+ Sbjct: 313 LFIGNLNPNKSVAELKVAISELFAKNDLAAV-DVRTGTNRKFGYVDFESAEDLEKALELT 371 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 V G I++ S + A + KNL +I L + F + + ++ + Sbjct: 372 GLK-VFGNEIKLEKPKGRDSKKVRAARTLLAKNLSFNITEDELKEVFE---DAVEIRLVS 427 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKV---YVGPFVRKQER--ENVFGSP 817 + G SKG +++++ + A+ + E G ++ + V Y G ++QER +N S Sbjct: 428 Q-DGRSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEKGQRQERTGKNSTWSG 486 Query: 818 KFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAV 997 + + + NLS S TE+ L+E+F T + V + GKS+ + F+ F + +DA A+ Sbjct: 487 ESKTLVLSNLSYSATEETLQEVFEK---ATFIKVPQNPHGKSKGYAFIEFASFEDAKEAL 543 Query: 998 EDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDD 1177 N + + + + R + + R A L++K L + Sbjct: 544 NSCNKMEIEGRTI---RLELQGPR-----------GSPNARSQPSKTLFVKGLSEDTTE- 588 Query: 1178 EKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAM-NGKMVGSK 1342 E LKE F G++ + V G +KG GFV F S EDA A AM +G++ G+K Sbjct: 589 ETLKESFE--GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNK 642 Score = 95.9 bits (237), Expect = 7e-19 Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 14/272 (5%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L +L ++ + +L +VF V +R+ S G AY+ F S ADA + LE Sbjct: 399 LLAKNLSFNITEDELKEVFEDA---VEIRLVSQDGR--SKGIAYIEFKSEADAEKNLEEK 453 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAAN---------IFIKNLDKSIDNKALYDTFSAFG 625 ++G+ + + Y+ ++ N + + NL S + L + F Sbjct: 454 QGAEIDGRSVSLYYTGEKGQRQERTGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKAT 513 Query: 626 NILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENV 805 I KV G+SKGY F+++ E A+ A+N N M + + + + E + Sbjct: 514 FI---KVPQNPHGKSKGYAFIEFASFEDAKEALNSCNKMEIEGRTI-------RLELQGP 563 Query: 806 FGSPKFNN-----VYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFE 970 GSP + ++VK LSE TTE+ LKE F G + + IV + G S+ FGFV+F Sbjct: 564 RGSPNARSQPSKTLFVKGLSEDTTEETLKESFE--GSVRARIVTDRETGSSKGFGFVDFN 621 Query: 971 NPDDAVHAVEDLNGKKFDDKELYVGRAQKKSE 1066 + +DA A E + + D ++ + A+ K E Sbjct: 622 SEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGE 653 Score = 82.8 bits (203), Expect = 6e-15 Identities = 78/287 (27%), Positives = 136/287 (47%), Gaps = 6/287 (2%) Frame = +2 Query: 554 NIFIKNLD--KSI-DNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAI 724 N+FI NL+ KS+ + K A ++ + V T G ++ +G+V +E E + A+ Sbjct: 312 NLFIGNLNPNKSVAELKVAISELFAKNDLAAVDVRT---GTNRKFGYVDFESAEDLEKAL 368 Query: 725 NELNGMLLNDKKVYVGPFVRKQERENVFGSPKFN---NVYVKNLSESTTEDNLKELFGNF 895 EL G+ + ++ K E+ S K + KNLS + TED LKE+F + Sbjct: 369 -ELTGLKVFGNEI-------KLEKPKGRDSKKVRAARTLLAKNLSFNITEDELKEVFEDA 420 Query: 896 GPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREM 1075 I V + DG+S+ ++ F++ DA +E+ G + D + + + +K +R+ Sbjct: 421 VEIRLV----SQDGRSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEKGQRQ- 475 Query: 1076 QLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVN 1255 E++ K + + L L NL S + E L+E+F + T KV ++ +G + Sbjct: 476 ------ERTGKNSTWSGESKTLVLSNLSYSATE-ETLQEVFEK---ATFIKVPQNPHGKS 525 Query: 1256 KGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRARLQ 1396 KG F+ F S EDA AL + N + + + + L + AR Q Sbjct: 526 KGYAFIEFASFEDAKEALNSCNKMEIEGRTIRLELQGPRGSPNARSQ 572
>Q14576:ELAV3_HUMAN ELAV-like protein 3 - Homo sapiens (Human)| Length = 367 Score = 97.4 bits (241), Expect = 2e-19 Identities = 81/328 (24%), Positives = 143/328 (43%), Gaps = 69/328 (21%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L V L ++ + +F +G + S ++ RD T SLGY +VN+S P DA +A+ L Sbjct: 41 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 100 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKV-A 649 N + K I++ Y+ PSS AN+++ L K++ K + FS +G I++ ++ Sbjct: 101 NGLKLQTKTIKVSYAR--PSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILV 158 Query: 650 TEMSGESKGYGFVQYEQDESAQNAINELNG-----------------------------M 742 +++G S+G GF+++++ A+ AI LNG + Sbjct: 159 DQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHL 218 Query: 743 LLNDKKVYVGPFVRKQER---ENVFG------SP-----KFNNVYVKNLS---------- 850 + + Y GP + +R +N+ SP +F+ + + +S Sbjct: 219 YQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKSPLSLIARFSPIAIDGMSGLAGVGLSGG 278 Query: 851 -----------ESTTEDNLKELFGNFGP---ITSVIVVR-ADDGKSRCFGFVNFENPDDA 985 + E + L+ FGP +T+V V+R K + FGFV N D+A Sbjct: 279 AAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEA 338 Query: 986 VHAVEDLNGKKFDDKELYVGRAQKKSER 1069 A+ LNG + ++ L V K + Sbjct: 339 AMAIASLNGYRLGERVLQVSFKTSKQHK 366 Score = 84.7 bits (208), Expect = 2e-15 Identities = 53/157 (33%), Positives = 84/157 (53%), Gaps = 2/157 (1%) Frame = +2 Query: 554 NIFIKNLDKSIDNKALYDTFSAFGNILSCK-VATEMSGESKGYGFVQYEQDESAQNAINE 730 N+ + L +++ F + G+I SCK V +++G+S GYGFV Y A AIN Sbjct: 40 NLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINT 99 Query: 731 LNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGP-IT 907 LNG+ L K + V + R S + N+YV L ++ ++ +++LF +G IT Sbjct: 100 LNGLKLQTKTIKVS-YARPSS-----ASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIIT 153 Query: 908 SVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKK 1018 S I+V G SR GF+ F+ +A A++ LNG+K Sbjct: 154 SRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQK 190 Score = 83.2 bits (204), Expect = 4e-15 Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 4/189 (2%) Frame = +2 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVHAVED 1003 N+ V L ++ T+D K LFG+ G I S +VR G+S +GFVN+ +P+DA A+ Sbjct: 40 NLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINT 99 Query: 1004 LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEK 1183 LNG K K + V A+ S + NLY+ L ++ E Sbjct: 100 LNGLKLQTKTIKVSYARPSSA------------------SIRDANLYVSGLPKTMSQKE- 140 Query: 1184 LKELFAEFGTITSCKVMRDS-NGVNKGSGFVAFKSSEDATRALVAMNGK--MVGSKPLYV 1354 +++LF+++G I + +++ D GV++G GF+ F +A A+ +NG+ + ++P+ V Sbjct: 141 MEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITV 200 Query: 1355 ALAQRKEER 1381 A ++ Sbjct: 201 KFANNPSQK 209 Score = 48.1 bits (113), Expect = 2e-04 Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%) Frame = +2 Query: 1130 GTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATRA 1306 G +++ NL D+ L +LF FG +T+ KV+RD + KG GFV + ++A A Sbjct: 283 GWCIFVYNLSPEADESV-LWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMA 341 Query: 1307 LVAMNGKMVGSKPLYVALAQRKEER 1381 + ++NG +G + L V+ K+ + Sbjct: 342 IASLNGYRLGERVLQVSFKTSKQHK 366
>P52912:TIA1_MOUSE Nucleolysin TIA-1 - Mus musculus (Mouse)| Length = 386 Score = 97.1 bits (240), Expect = 3e-19 Identities = 72/270 (26%), Positives = 122/270 (45%), Gaps = 30/270 (11%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LYVG+L V +A + +FSQ+G + ++ D T + Y +V F AA AL + Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAM 66 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAA-------------NIFIKNLDKSIDNKALYDTF 613 N + GK +++ ++ S +K ++ ++F+ +L I + + F Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 126 Query: 614 SAFGNILSCKVATEM-SGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQ 790 + FG I +V +M +G+SKGYGFV + A+NAI ++ G L +++ RK Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186 Query: 791 --------------ERENVFGSPKFNN--VYVKNLSESTTEDNLKELFGNFGPITSVIVV 922 + V NN VY ++ TE +++ F FG I + V Sbjct: 187 PAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVF 246 Query: 923 RADDGKSRCFGFVNFENPDDAVHAVEDLNG 1012 D G + FV F + + A HA+ +NG Sbjct: 247 -PDKG----YSFVRFSSHESAAHAIVSVNG 271 Score = 92.4 bits (228), Expect = 7e-18 Identities = 72/273 (26%), Positives = 129/273 (47%), Gaps = 14/273 (5%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 +++ NL + + + FS G +CK+ + +G Y FV++ + A A+ +N Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDP-YCFVEFHEHRHAAAALAAMN 67 Query: 737 GMLLNDKKVYVG----PFVRKQEREN-----VFGSPKFNNVYVKNLSESTTEDNLKELFG 889 G + K+V V P +K++ + S +V+V +LS T +++K F Sbjct: 68 GRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFA 127 Query: 890 NFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSE 1066 FG I+ VV+ GKS+ +GFV+F N DA +A++ + G+ +++ A +K Sbjct: 128 PFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPP 187 Query: 1067 REMQLKESFEK--SNKETADRNQGTN--LYLKNLDGSVDDDEKLKELFAEFGTITSCKVM 1234 ES K S E ++ N +Y + + ++ +++ F+ FG I +V Sbjct: 188 APKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGL-TEQLMRQTFSPFGQIMEIRVF 246 Query: 1235 RDSNGVNKGSGFVAFKSSEDATRALVAMNGKMV 1333 D KG FV F S E A A+V++NG + Sbjct: 247 PD-----KGYSFVRFSSHESAAHAIVSVNGTTI 274 Score = 75.9 bits (185), Expect = 7e-13 Identities = 53/182 (29%), Positives = 90/182 (49%), Gaps = 1/182 (0%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLN 1009 +YV NLS TE + +LF GP + ++ G + FV F A A+ +N Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDP-YCFVEFHEHRHAAAALAAMN 67 Query: 1010 GKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLK 1189 G+K KE+ V A S ++ S S + + D ++++ +L + ++ +K Sbjct: 68 GRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDH---FHVFVGDLSPEITTED-IK 123 Query: 1190 ELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQ 1366 FA FG I+ +V++D + G +KG GFV+F + DA A+ M G+ +G + + A Sbjct: 124 AAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWAT 183 Query: 1367 RK 1372 RK Sbjct: 184 RK 185 Score = 71.2 bits (173), Expect = 2e-11 Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 26/201 (12%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 ++VGDL + + F+ G + RV +D+ T S GY +V+F + DA A++ + Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKS--------------------GAANIFIKNLDKSIDN 592 + G+ IR ++ R P + KS ++ + + Sbjct: 168 GGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTE 227 Query: 593 KALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDK--KVY 766 + + TFS FG I+ +V + KGY FV++ ESA +AI +NG + K Y Sbjct: 228 QLMRQTFSPFGQIMEIRVFPD-----KGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCY 282 Query: 767 VG----PFVRKQERENVFGSP 817 G + +++N G P Sbjct: 283 WGKETLDMINPVQQQNQIGYP 303
>Q5RF26:NUCL_PONPY Nucleolin - Pongo pygmaeus (Orangutan)| Length = 712 Score = 97.1 bits (240), Expect = 3e-19 Identities = 92/357 (25%), Positives = 159/357 (44%), Gaps = 7/357 (1%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L+VG+L+ + +L S V + + V DV M+ + YV+F S D +ALE+ Sbjct: 311 LFVGNLNFNKSAPELKTGISDVFAKNDLAVV-DVRIGMTRKFGYVDFESAEDLEKALELT 369 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 V G I++ S ++ A + KNL + L + F I Sbjct: 370 GLK-VFGNEIKLEKPKGKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAAEIR----LV 424 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKV---YVGPFVRKQER---ENVFGS 814 G+SKG +++++ + A+ E G ++ + + Y G + Q+ +N S Sbjct: 425 SKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEKGQNQDYRGGKNSTWS 484 Query: 815 PKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHA 994 + + + NLS S TE+ L+E+F T + V + +GKS+ + F+ F + +DA A Sbjct: 485 GESKTLVLSNLSYSATEETLQEVFEK---ATFIKVPQNQNGKSKGYAFIEFASFEDAKEA 541 Query: 995 VEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDD 1174 + N ++ + + + R + + R A L++K L + Sbjct: 542 LNSCNKREIEGRAI---RLELQGPR-----------GSPNARSQPSKTLFVKGLSEDTTE 587 Query: 1175 DEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAM-NGKMVGSK 1342 E LKE F G++ + V G +KG GFV F S EDA A AM +G++ G+K Sbjct: 588 -ETLKESFD--GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNK 641 Score = 95.5 bits (236), Expect = 9e-19 Identities = 76/273 (27%), Positives = 124/273 (45%), Gaps = 15/273 (5%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L +L V +L +VF + V S G AY+ F + ADA + E Sbjct: 397 LLAKNLPYKVTQDELKEVFEDAAEIRLVS-----KDGKSKGIAYIEFKTEADAEKTFEEK 451 Query: 473 NFTPVNGKPIRIMYS-----NRDPSSRKSG-----AANIFIKNLDKSIDNKALYDTFSAF 622 T ++G+ I + Y+ N+D K+ + + + NL S + L + F Sbjct: 452 QGTEIDGRSISLYYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKA 511 Query: 623 GNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQEREN 802 I KV +G+SKGY F+++ E A+ A+N N + + + + E + Sbjct: 512 TFI---KVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAI-------RLELQG 561 Query: 803 VFGSPKFNN-----VYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNF 967 GSP + ++VK LSE TTE+ LKE F G + + IV + G S+ FGFV+F Sbjct: 562 PRGSPNARSQPSKTLFVKGLSEDTTEETLKESFD--GSVRARIVTDRETGSSKGFGFVDF 619 Query: 968 ENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSE 1066 + +DA A E + + D ++ + A+ K E Sbjct: 620 NSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGE 652 Score = 78.2 bits (191), Expect = 1e-13 Identities = 70/286 (24%), Positives = 129/286 (45%), Gaps = 3/286 (1%) Frame = +2 Query: 548 AANIFIKNLDKSIDNKALYDTFSAFGNILS---CKVATEMSGESKGYGFVQYEQDESAQN 718 A N+F+ NL+ NK+ + + ++ + V G ++ +G+V +E E + Sbjct: 308 AFNLFVGNLNF---NKSAPELKTGISDVFAKNDLAVVDVRIGMTRKFGYVDFESAEDLEK 364 Query: 719 AINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFG 898 A+ EL G+ + ++ + K + ++ + KNL T+D LKE+F + Sbjct: 365 AL-ELTGLKVFGNEIKL----EKPKGKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAA 419 Query: 899 PITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQ 1078 I V + DGKS+ ++ F+ DA E+ G + D + + + +K + + Sbjct: 420 EIRLV----SKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEKGQNQDY 475 Query: 1079 LKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNK 1258 + K + + L L NL S + E L+E+F + T KV ++ NG +K Sbjct: 476 ------RGGKNSTWSGESKTLVLSNLSYSATE-ETLQEVFEK---ATFIKVPQNQNGKSK 525 Query: 1259 GSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRARLQ 1396 G F+ F S EDA AL + N + + + + + L + AR Q Sbjct: 526 GYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPRGSPNARSQ 571
>Q4R4J7:NUCL_MACFA Nucleolin - Macaca fascicularis (Crab eating macaque) (Cynomolgus| monkey) Length = 711 Score = 97.1 bits (240), Expect = 3e-19 Identities = 92/357 (25%), Positives = 159/357 (44%), Gaps = 7/357 (1%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L+VG+L+ + +L S V + + V DV M+ + YV+F S D +ALE+ Sbjct: 310 LFVGNLNFNKSAPELKTGISDVFAKNDLAVV-DVRIGMTRKFGYVDFESAEDLEKALELT 368 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 V G I++ S ++ A + KNL + L + F I Sbjct: 369 GLK-VFGNEIKLEKPKGKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAAEIR----LV 423 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKV---YVGPFVRKQER---ENVFGS 814 G+SKG +++++ + A+ E G ++ + + Y G + Q+ +N S Sbjct: 424 SKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEKGQNQDYRGGKNSTWS 483 Query: 815 PKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHA 994 + + + NLS S TE+ L+E+F T + V + +GKS+ + F+ F + +DA A Sbjct: 484 GESKTLVLSNLSYSATEETLQEVFEK---ATFIKVPQNQNGKSKGYAFIEFASFEDAKEA 540 Query: 995 VEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDD 1174 + N ++ + + + R + + R A L++K L + Sbjct: 541 LNSCNKREIEGRAI---RLELQGPR-----------GSPNARSQPSKTLFVKGLSEDTTE 586 Query: 1175 DEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAM-NGKMVGSK 1342 E LKE F G++ + V G +KG GFV F S EDA A AM +G++ G+K Sbjct: 587 -ETLKESFD--GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNK 640 Score = 95.5 bits (236), Expect = 9e-19 Identities = 76/273 (27%), Positives = 124/273 (45%), Gaps = 15/273 (5%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L +L V +L +VF + V S G AY+ F + ADA + E Sbjct: 396 LLAKNLPYKVTQDELKEVFEDAAEIRLVS-----KDGKSKGIAYIEFKTEADAEKTFEEK 450 Query: 473 NFTPVNGKPIRIMYS-----NRDPSSRKSG-----AANIFIKNLDKSIDNKALYDTFSAF 622 T ++G+ I + Y+ N+D K+ + + + NL S + L + F Sbjct: 451 QGTEIDGRSISLYYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKA 510 Query: 623 GNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQEREN 802 I KV +G+SKGY F+++ E A+ A+N N + + + + E + Sbjct: 511 TFI---KVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAI-------RLELQG 560 Query: 803 VFGSPKFNN-----VYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNF 967 GSP + ++VK LSE TTE+ LKE F G + + IV + G S+ FGFV+F Sbjct: 561 PRGSPNARSQPSKTLFVKGLSEDTTEETLKESFD--GSVRARIVTDRETGSSKGFGFVDF 618 Query: 968 ENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSE 1066 + +DA A E + + D ++ + A+ K E Sbjct: 619 NSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGE 651 Score = 78.2 bits (191), Expect = 1e-13 Identities = 70/286 (24%), Positives = 129/286 (45%), Gaps = 3/286 (1%) Frame = +2 Query: 548 AANIFIKNLDKSIDNKALYDTFSAFGNILS---CKVATEMSGESKGYGFVQYEQDESAQN 718 A N+F+ NL+ NK+ + + ++ + V G ++ +G+V +E E + Sbjct: 307 AFNLFVGNLNF---NKSAPELKTGISDVFAKNDLAVVDVRIGMTRKFGYVDFESAEDLEK 363 Query: 719 AINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFG 898 A+ EL G+ + ++ + K + ++ + KNL T+D LKE+F + Sbjct: 364 AL-ELTGLKVFGNEIKL----EKPKGKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAA 418 Query: 899 PITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQ 1078 I V + DGKS+ ++ F+ DA E+ G + D + + + +K + + Sbjct: 419 EIRLV----SKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEKGQNQDY 474 Query: 1079 LKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNK 1258 + K + + L L NL S + E L+E+F + T KV ++ NG +K Sbjct: 475 ------RGGKNSTWSGESKTLVLSNLSYSATE-ETLQEVFEK---ATFIKVPQNQNGKSK 524 Query: 1259 GSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRARLQ 1396 G F+ F S EDA AL + N + + + + + L + AR Q Sbjct: 525 GYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPRGSPNARSQ 570
>P19338:NUCL_HUMAN Nucleolin - Homo sapiens (Human)| Length = 710 Score = 97.1 bits (240), Expect = 3e-19 Identities = 92/357 (25%), Positives = 159/357 (44%), Gaps = 7/357 (1%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L+VG+L+ + +L S V + + V DV M+ + YV+F S D +ALE+ Sbjct: 309 LFVGNLNFNKSAPELKTGISDVFAKNDLAVV-DVRIGMTRKFGYVDFESAEDLEKALELT 367 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 V G I++ S ++ A + KNL + L + F I Sbjct: 368 GLK-VFGNEIKLEKPKGKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAAEIR----LV 422 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKV---YVGPFVRKQER---ENVFGS 814 G+SKG +++++ + A+ E G ++ + + Y G + Q+ +N S Sbjct: 423 SKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEKGQNQDYRGGKNSTWS 482 Query: 815 PKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHA 994 + + + NLS S TE+ L+E+F T + V + +GKS+ + F+ F + +DA A Sbjct: 483 GESKTLVLSNLSYSATEETLQEVFEK---ATFIKVPQNQNGKSKGYAFIEFASFEDAKEA 539 Query: 995 VEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDD 1174 + N ++ + + + R + + R A L++K L + Sbjct: 540 LNSCNKREIEGRAI---RLELQGPR-----------GSPNARSQPSKTLFVKGLSEDTTE 585 Query: 1175 DEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAM-NGKMVGSK 1342 E LKE F G++ + V G +KG GFV F S EDA A AM +G++ G+K Sbjct: 586 -ETLKESFD--GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNK 639 Score = 95.5 bits (236), Expect = 9e-19 Identities = 76/273 (27%), Positives = 124/273 (45%), Gaps = 15/273 (5%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L +L V +L +VF + V S G AY+ F + ADA + E Sbjct: 395 LLAKNLPYKVTQDELKEVFEDAAEIRLVS-----KDGKSKGIAYIEFKTEADAEKTFEEK 449 Query: 473 NFTPVNGKPIRIMYS-----NRDPSSRKSG-----AANIFIKNLDKSIDNKALYDTFSAF 622 T ++G+ I + Y+ N+D K+ + + + NL S + L + F Sbjct: 450 QGTEIDGRSISLYYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKA 509 Query: 623 GNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQEREN 802 I KV +G+SKGY F+++ E A+ A+N N + + + + E + Sbjct: 510 TFI---KVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAI-------RLELQG 559 Query: 803 VFGSPKFNN-----VYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNF 967 GSP + ++VK LSE TTE+ LKE F G + + IV + G S+ FGFV+F Sbjct: 560 PRGSPNARSQPSKTLFVKGLSEDTTEETLKESFD--GSVRARIVTDRETGSSKGFGFVDF 617 Query: 968 ENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSE 1066 + +DA A E + + D ++ + A+ K E Sbjct: 618 NSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGE 650 Score = 78.2 bits (191), Expect = 1e-13 Identities = 70/286 (24%), Positives = 129/286 (45%), Gaps = 3/286 (1%) Frame = +2 Query: 548 AANIFIKNLDKSIDNKALYDTFSAFGNILS---CKVATEMSGESKGYGFVQYEQDESAQN 718 A N+F+ NL+ NK+ + + ++ + V G ++ +G+V +E E + Sbjct: 306 AFNLFVGNLNF---NKSAPELKTGISDVFAKNDLAVVDVRIGMTRKFGYVDFESAEDLEK 362 Query: 719 AINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFG 898 A+ EL G+ + ++ + K + ++ + KNL T+D LKE+F + Sbjct: 363 AL-ELTGLKVFGNEIKL----EKPKGKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAA 417 Query: 899 PITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQ 1078 I V + DGKS+ ++ F+ DA E+ G + D + + + +K + + Sbjct: 418 EIRLV----SKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEKGQNQDY 473 Query: 1079 LKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNK 1258 + K + + L L NL S + E L+E+F + T KV ++ NG +K Sbjct: 474 ------RGGKNSTWSGESKTLVLSNLSYSATE-ETLQEVFEK---ATFIKVPQNQNGKSK 523 Query: 1259 GSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRARLQ 1396 G F+ F S EDA AL + N + + + + + L + AR Q Sbjct: 524 GYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPRGSPNARSQ 569
>P31483:TIA1_HUMAN Nucleolysin TIA-1 isoform p40 - Homo sapiens (Human)| Length = 386 Score = 96.7 bits (239), Expect = 4e-19 Identities = 71/270 (26%), Positives = 120/270 (44%), Gaps = 30/270 (11%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LYVG+L V +A + +FSQ+G + ++ D T + Y +V F AA AL + Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAM 66 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAA-------------NIFIKNLDKSIDNKALYDTF 613 N + GK +++ ++ S +K ++ ++F+ +L I + + F Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQNHFHVFVGDLSPQITTEDIKAAF 126 Query: 614 SAFGNILSCKVATEM-SGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQ 790 + FG I +V +M +G+SKGYGFV + A+NAI ++ G L +++ RK Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186 Query: 791 ERENVF----------------GSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVV 922 SP VY ++ TE +++ F FG I + V Sbjct: 187 PAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVF 246 Query: 923 RADDGKSRCFGFVNFENPDDAVHAVEDLNG 1012 D G + FV F + + A HA+ +NG Sbjct: 247 -PDKG----YSFVRFNSHESAAHAIVSVNG 271 Score = 94.7 bits (234), Expect = 1e-18 Identities = 73/273 (26%), Positives = 133/273 (48%), Gaps = 14/273 (5%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 +++ NL + + + FS G +CK+ + +G Y FV++ + A A+ +N Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDP-YCFVEFHEHRHAAAALAAMN 67 Query: 737 GMLLNDKKVYVG----PFVRKQEREN--VFGSPKFNN---VYVKNLSESTTEDNLKELFG 889 G + K+V V P +K++ + V + + N V+V +LS T +++K F Sbjct: 68 GRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQNHFHVFVGDLSPQITTEDIKAAFA 127 Query: 890 NFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSE 1066 FG I+ VV+ GKS+ +GFV+F N DA +A++ + G+ +++ A +K Sbjct: 128 PFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPP 187 Query: 1067 REMQLKESFEK--SNKETADRNQGTN--LYLKNLDGSVDDDEKLKELFAEFGTITSCKVM 1234 ES K S E +++ +N +Y + + ++ +++ F+ FG I +V Sbjct: 188 APKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGL-TEQLMRQTFSPFGQIMEIRVF 246 Query: 1235 RDSNGVNKGSGFVAFKSSEDATRALVAMNGKMV 1333 D KG FV F S E A A+V++NG + Sbjct: 247 PD-----KGYSFVRFNSHESAAHAIVSVNGTTI 274 Score = 73.9 bits (180), Expect = 3e-12 Identities = 52/182 (28%), Positives = 90/182 (49%), Gaps = 1/182 (0%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLN 1009 +YV NLS TE + +LF GP + ++ G + FV F A A+ +N Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDP-YCFVEFHEHRHAAAALAAMN 67 Query: 1010 GKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLK 1189 G+K KE+ V A S ++ S S + + + ++++ +L + ++ +K Sbjct: 68 GRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQNH---FHVFVGDLSPQITTED-IK 123 Query: 1190 ELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQ 1366 FA FG I+ +V++D + G +KG GFV+F + DA A+ M G+ +G + + A Sbjct: 124 AAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWAT 183 Query: 1367 RK 1372 RK Sbjct: 184 RK 185 Score = 71.6 bits (174), Expect = 1e-11 Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 26/202 (12%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 ++VGDL + + F+ G + RV +D+ T S GY +V+F + DA A++ + Sbjct: 108 VFVGDLSPQITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKS--------------------GAANIFIKNLDKSIDN 592 + G+ IR ++ R P + KS ++ + + Sbjct: 168 GGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTE 227 Query: 593 KALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDK--KVY 766 + + TFS FG I+ +V + KGY FV++ ESA +AI +NG + K Y Sbjct: 228 QLMRQTFSPFGQIMEIRVFPD-----KGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCY 282 Query: 767 VG----PFVRKQERENVFGSPK 820 G + +++N G P+ Sbjct: 283 WGKETLDMINPVQQQNQIGYPQ 304
>O09032:ELAV4_RAT ELAV-like protein 4 - Rattus norvegicus (Rat)| Length = 373 Score = 96.7 bits (239), Expect = 4e-19 Identities = 96/359 (26%), Positives = 156/359 (43%), Gaps = 70/359 (19%) Frame = +2 Query: 515 SNRD-PSSRKSGAA------NIFIKNLDKSIDNKALYDTFSAFGNILSCK-VATEMSGES 670 +NR+ PS ++GAA N+ + L +++ + F + G I SCK V +++G+S Sbjct: 20 NNRNCPSPMQTGAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQS 79 Query: 671 KGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLS 850 GYGFV Y + A+ AIN LNG+ L K + V + R S + N+YV L Sbjct: 80 LGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVS-YARPSS-----ASIRDANLYVSGLP 133 Query: 851 ESTTEDNLKELFGNFGP-ITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFD- 1024 ++ T+ L++LF +G ITS I+V G SR GF+ F+ +A A++ LNG+K Sbjct: 134 KTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSG 193 Query: 1025 -DKELYVGRAQKKSEREMQ--LKESFEKSNKETAD--RNQGTNLYLKNL----------- 1156 + + V A S++ Q L + ++ N+ +Q L NL Sbjct: 194 ATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVKRLM 253 Query: 1157 ------------------DG----------------------SVDDDEKLKELFAEFG-- 1210 DG ++ D L+ FG Sbjct: 254 SGPVPPSACPPRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSPDSDESVLWQLFGPF 313 Query: 1211 -TITSCKVMRDSN-GVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEER 1381 + + KV+RD N KG GFV + ++A A+ ++NG +G + L V+ K + Sbjct: 314 GAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKAHK 372 Score = 90.1 bits (222), Expect = 4e-17 Identities = 48/150 (32%), Positives = 84/150 (56%), Gaps = 1/150 (0%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L V L ++ + +F +G + S ++ RD T SLGY +VN+ P DA +A+ L Sbjct: 41 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKV-A 649 N + K I++ Y+ PSS AN+++ L K++ K L FS +G I++ ++ Sbjct: 101 NGLRLQTKTIKVSYAR--PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILV 158 Query: 650 TEMSGESKGYGFVQYEQDESAQNAINELNG 739 +++G S+G GF+++++ A+ AI LNG Sbjct: 159 DQVTGVSRGVGFIRFDKRIEAEEAIKGLNG 188 Score = 78.6 bits (192), Expect = 1e-13 Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 4/199 (2%) Frame = +2 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVHAVED 1003 N+ V L ++ T++ + LFG+ G I S +VR G+S +GFVN+ +P DA A+ Sbjct: 40 NLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINT 99 Query: 1004 LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEK 1183 LNG + K + V A+ S + NLY+ L ++ E Sbjct: 100 LNGLRLQTKTIKVSYARPSSA------------------SIRDANLYVSGLPKTMTQKE- 140 Query: 1184 LKELFAEFGTITSCKVMRDS-NGVNKGSGFVAFKSSEDATRALVAMNGKMV--GSKPLYV 1354 L++LF+++G I + +++ D GV++G GF+ F +A A+ +NG+ ++P+ V Sbjct: 141 LEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITV 200 Query: 1355 ALAQRKEERRARLQAQFSQ 1411 A ++ + QA SQ Sbjct: 201 KFANNPSQKSS--QALLSQ 217 Score = 45.1 bits (105), Expect = 0.001 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 2/88 (2%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LYV L ++ +L +FSQ G +++ R+ D T +S G ++ F +A A++ L Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 186 Query: 473 NFTPVNG--KPIRIMYSNRDPSSRKSGA 550 N +G +PI + ++N +PS + S A Sbjct: 187 NGQKPSGATEPITVKFAN-NPSQKSSQA 213
>Q61701:ELAV4_MOUSE ELAV-like protein 4 - Mus musculus (Mouse)| Length = 385 Score = 96.7 bits (239), Expect = 4e-19 Identities = 96/359 (26%), Positives = 156/359 (43%), Gaps = 70/359 (19%) Frame = +2 Query: 515 SNRD-PSSRKSGAA------NIFIKNLDKSIDNKALYDTFSAFGNILSCK-VATEMSGES 670 +NR+ PS ++GAA N+ + L +++ + F + G I SCK V +++G+S Sbjct: 32 NNRNCPSPMQTGAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQS 91 Query: 671 KGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLS 850 GYGFV Y + A+ AIN LNG+ L K + V + R S + N+YV L Sbjct: 92 LGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVS-YARPSS-----ASIRDANLYVSGLP 145 Query: 851 ESTTEDNLKELFGNFGP-ITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFD- 1024 ++ T+ L++LF +G ITS I+V G SR GF+ F+ +A A++ LNG+K Sbjct: 146 KTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSG 205 Query: 1025 -DKELYVGRAQKKSEREMQ--LKESFEKSNKETAD--RNQGTNLYLKNL----------- 1156 + + V A S++ Q L + ++ N+ +Q L NL Sbjct: 206 ATEPITVKFANNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVKRLM 265 Query: 1157 ------------------DG----------------------SVDDDEKLKELFAEFG-- 1210 DG ++ D L+ FG Sbjct: 266 SGPVPPSACPPRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSPDSDESVLWQLFGPF 325 Query: 1211 -TITSCKVMRDSN-GVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEER 1381 + + KV+RD N KG GFV + ++A A+ ++NG +G + L V+ K + Sbjct: 326 GAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKAHK 384 Score = 90.1 bits (222), Expect = 4e-17 Identities = 48/150 (32%), Positives = 84/150 (56%), Gaps = 1/150 (0%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L V L ++ + +F +G + S ++ RD T SLGY +VN+ P DA +A+ L Sbjct: 53 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 112 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKV-A 649 N + K I++ Y+ PSS AN+++ L K++ K L FS +G I++ ++ Sbjct: 113 NGLRLQTKTIKVSYAR--PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILV 170 Query: 650 TEMSGESKGYGFVQYEQDESAQNAINELNG 739 +++G S+G GF+++++ A+ AI LNG Sbjct: 171 DQVTGVSRGVGFIRFDKRIEAEEAIKGLNG 200 Score = 78.6 bits (192), Expect = 1e-13 Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 4/199 (2%) Frame = +2 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVHAVED 1003 N+ V L ++ T++ + LFG+ G I S +VR G+S +GFVN+ +P DA A+ Sbjct: 52 NLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINT 111 Query: 1004 LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEK 1183 LNG + K + V A+ S + NLY+ L ++ E Sbjct: 112 LNGLRLQTKTIKVSYARPSSA------------------SIRDANLYVSGLPKTMTQKE- 152 Query: 1184 LKELFAEFGTITSCKVMRDS-NGVNKGSGFVAFKSSEDATRALVAMNGKMV--GSKPLYV 1354 L++LF+++G I + +++ D GV++G GF+ F +A A+ +NG+ ++P+ V Sbjct: 153 LEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITV 212 Query: 1355 ALAQRKEERRARLQAQFSQ 1411 A ++ + QA SQ Sbjct: 213 KFANNPSQKSS--QALLSQ 229 Score = 45.1 bits (105), Expect = 0.001 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 2/88 (2%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LYV L ++ +L +FSQ G +++ R+ D T +S G ++ F +A A++ L Sbjct: 139 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 198 Query: 473 NFTPVNG--KPIRIMYSNRDPSSRKSGA 550 N +G +PI + ++N +PS + S A Sbjct: 199 NGQKPSGATEPITVKFAN-NPSQKSSQA 225
>Q60900:ELAV3_MOUSE ELAV-like protein 3 - Mus musculus (Mouse)| Length = 367 Score = 96.7 bits (239), Expect = 4e-19 Identities = 81/328 (24%), Positives = 142/328 (43%), Gaps = 69/328 (21%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L V L ++ + +F +G + S ++ RD T SLGY +VN+S P DA +A+ L Sbjct: 41 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 100 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 N + K I++ Y+ PSS AN+++ L K++ K + FS +G I++ ++ Sbjct: 101 NGLKLQTKTIKVSYAR--PSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILL 158 Query: 653 EM-SGESKGYGFVQYEQDESAQNAINELNG-----------------------------M 742 + +G S+G GF+++++ A+ AI LNG + Sbjct: 159 DQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHL 218 Query: 743 LLNDKKVYVGPFVRKQER---ENVFG------SP-----KFNNVYVKNLS---------- 850 + + Y GP + +R +N+ SP +F+ + + +S Sbjct: 219 YQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKSPLSLIARFSPIAIDGMSGLAGVGLSGG 278 Query: 851 -----------ESTTEDNLKELFGNFGP---ITSVIVVR-ADDGKSRCFGFVNFENPDDA 985 + E + L+ FGP +T+V V+R K + FGFV N D+A Sbjct: 279 AAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEA 338 Query: 986 VHAVEDLNGKKFDDKELYVGRAQKKSER 1069 A+ LNG + ++ L V K + Sbjct: 339 AMAIASLNGYRLGERVLQVSFKTSKQHK 366 Score = 84.0 bits (206), Expect = 3e-15 Identities = 55/189 (29%), Positives = 97/189 (51%), Gaps = 4/189 (2%) Frame = +2 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVHAVED 1003 N+ V L ++ T+D K LFG+ G I S +VR G+S +GFVN+ +P+DA A+ Sbjct: 40 NLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINT 99 Query: 1004 LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEK 1183 LNG K K + V A+ S + NLY+ L ++ E Sbjct: 100 LNGLKLQTKTIKVSYARPSSA------------------SIRDANLYVSGLPKTMSQKE- 140 Query: 1184 LKELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATRALVAMNGK--MVGSKPLYV 1354 +++LF+++G I + +++ D + GV++G GF+ F +A A+ +NG+ + ++P+ V Sbjct: 141 MEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITV 200 Query: 1355 ALAQRKEER 1381 A ++ Sbjct: 201 KFANNPSQK 209 Score = 84.0 bits (206), Expect = 3e-15 Identities = 52/157 (33%), Positives = 84/157 (53%), Gaps = 2/157 (1%) Frame = +2 Query: 554 NIFIKNLDKSIDNKALYDTFSAFGNILSCK-VATEMSGESKGYGFVQYEQDESAQNAINE 730 N+ + L +++ F + G+I SCK V +++G+S GYGFV Y A AIN Sbjct: 40 NLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINT 99 Query: 731 LNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGP-IT 907 LNG+ L K + V + R S + N+YV L ++ ++ +++LF +G IT Sbjct: 100 LNGLKLQTKTIKVS-YARPSS-----ASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIIT 153 Query: 908 SVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKK 1018 S I++ G SR GF+ F+ +A A++ LNG+K Sbjct: 154 SRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQK 190 Score = 48.1 bits (113), Expect = 2e-04 Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%) Frame = +2 Query: 1130 GTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATRA 1306 G +++ NL D+ L +LF FG +T+ KV+RD + KG GFV + ++A A Sbjct: 283 GWCIFVYNLSPEADESV-LWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMA 341 Query: 1307 LVAMNGKMVGSKPLYVALAQRKEER 1381 + ++NG +G + L V+ K+ + Sbjct: 342 IASLNGYRLGERVLQVSFKTSKQHK 366
>P09405:NUCL_MOUSE Nucleolin - Mus musculus (Mouse)| Length = 707 Score = 94.4 bits (233), Expect = 2e-18 Identities = 91/356 (25%), Positives = 166/356 (46%), Gaps = 6/356 (1%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++G+L+ + +L S++ + + V DV T + + YV+F S D +ALE+ Sbjct: 311 LFIGNLNPNKSVNELKFAISELFAKNDLAVV-DVRTGTNRKFGYVDFESAEDLEKALELT 369 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 V G I++ S + A + KNL +I L + F + + ++ + Sbjct: 370 GLK-VFGNEIKLEKPKGRDSKKVRAARTLLAKNLSFNITEDELKEVFE---DAMEIRLVS 425 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKV---YVGPFVRKQERENVFG--SP 817 + G+SKG +++++ + A+ + E G ++ + V Y G ++QER S Sbjct: 426 Q-DGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEKGQRQERTGKTSTWSG 484 Query: 818 KFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAV 997 + + + NLS S T++ L+E+F T + V + GK + + F+ F + +DA A+ Sbjct: 485 ESKTLVLSNLSYSATKETLEEVFEK---ATFIKVPQNPHGKPKGYAFIEFASFEDAKEAL 541 Query: 998 EDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDD 1177 N + + + + + E+Q S + +K L++K L + Sbjct: 542 NSCNKMEIEGRTIRL---------ELQGSNSRSQPSK---------TLFVKGLSEDTTE- 582 Query: 1178 EKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAM-NGKMVGSK 1342 E LKE F G++ + V G +KG GFV F S EDA A AM +G++ G+K Sbjct: 583 ETLKESFE--GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNK 636 Score = 91.3 bits (225), Expect = 2e-17 Identities = 72/267 (26%), Positives = 120/267 (44%), Gaps = 9/267 (3%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L +L ++ + +L +VF + V S G AY+ F S ADA + LE Sbjct: 397 LLAKNLSFNITEDELKEVFEDAMEIRLVS-----QDGKSKGIAYIEFKSEADAEKNLEEK 451 Query: 473 NFTPVNGKPIRIMYSNRD---------PSSRKSGAANIFIKNLDKSIDNKALYDTFSAFG 625 ++G+ + + Y+ S+ + + + NL S + L + F Sbjct: 452 QGAEIDGRSVSLYYTGEKGQRQERTGKTSTWSGESKTLVLSNLSYSATKETLEEVFEKAT 511 Query: 626 NILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENV 805 I KV G+ KGY F+++ E A+ A+N N M + G +R + + + Sbjct: 512 FI---KVPQNPHGKPKGYAFIEFASFEDAKEALNSCNKMEIE------GRTIRLELQGSN 562 Query: 806 FGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDA 985 S ++VK LSE TTE+ LKE F G + + IV + G S+ FGFV+F + +DA Sbjct: 563 SRSQPSKTLFVKGLSEDTTEETLKESFE--GSVRARIVTDRETGSSKGFGFVDFNSEEDA 620 Query: 986 VHAVEDLNGKKFDDKELYVGRAQKKSE 1066 A E + + D ++ + A+ K E Sbjct: 621 KAAKEAMEDGEIDGNKVTLDWAKPKGE 647 Score = 58.5 bits (140), Expect = 1e-07 Identities = 60/232 (25%), Positives = 104/232 (44%) Frame = +2 Query: 695 EQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNL 874 E++E + A + + K+ P +KQ+ E + FN +++ NL+ + + + L Sbjct: 270 EEEEPVKAAPGKRKKEMTKQKEA---PEAKKQKVEGSEPTTPFN-LFIGNLNPNKSVNEL 325 Query: 875 KELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQ 1054 K + VV G +R FG+V+FE+ +D A+E L G K E+ + + Sbjct: 326 KFAISELFAKNDLAVVDVRTGTNRKFGYVDFESAEDLEKALE-LTGLKVFGNEI---KLE 381 Query: 1055 KKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVM 1234 K R+ S K A R L KNL ++ +DE LKE+F + I + Sbjct: 382 KPKGRD---------SKKVRAAR----TLLAKNLSFNITEDE-LKEVFEDAMEIR----L 423 Query: 1235 RDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRAR 1390 +G +KG ++ FKS DA + L G + + + + K +R+ R Sbjct: 424 VSQDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEKGQRQER 475
>O01671:SXL_MEGSC Sex-lethal homolog - Megaselia scalaris| Length = 321 Score = 90.5 bits (223), Expect = 3e-17 Identities = 48/152 (31%), Positives = 83/152 (54%), Gaps = 1/152 (0%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L V L +QD +L+ +F +G + + R+ RD T S GY +V+F S ADA RA+ L Sbjct: 80 LIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADALRAINNL 139 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 N V K I++ ++ P + N+++ NL +SI ++ L F +G I+ + Sbjct: 140 NGITVRNKRIKVSFAR--PGGEQLRDTNLYVTNLSRSITDEQLETIFGKYGQIVQKNILR 197 Query: 653 EM-SGESKGYGFVQYEQDESAQNAINELNGML 745 + +G +G F+++ + E AQ AI+ LN ++ Sbjct: 198 DKHTGTPRGVAFIRFNKREEAQEAISALNNVI 229 Score = 82.8 bits (203), Expect = 6e-15 Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 2/162 (1%) Frame = +2 Query: 530 SSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYEQDE 706 S + N+ + L + + ++ LY F G I +C++ + +G S GYGFV + + Sbjct: 71 SGTNNSGTNLIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEA 130 Query: 707 SAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELF 886 A AIN LNG+ + +K++ V F R + + N+YV NLS S T++ L+ +F Sbjct: 131 DALRAINNLNGITVRNKRIKVS-FARPGGEQ-----LRDTNLYVTNLSRSITDEQLETIF 184 Query: 887 GNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHAVEDLN 1009 G +G I ++R G R F+ F ++A A+ LN Sbjct: 185 GKYGQIVQKNILRDKHTGTPRGVAFIRFNKREEAQEAISALN 226 Score = 78.2 bits (191), Expect = 1e-13 Identities = 57/184 (30%), Positives = 94/184 (51%), Gaps = 4/184 (2%) Frame = +2 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRA-DDGKSRCFGFVNFENPDDAVHAVED 1003 N+ V L + + L LF GPI + ++R G S +GFV+F + DA+ A+ + Sbjct: 79 NLIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADALRAINN 138 Query: 1004 LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEK 1183 LNG +K + V A+ E QL++ TNLY+ NL S+ DE+ Sbjct: 139 LNGITVRNKRIKVSFARPGGE---QLRD---------------TNLYVTNLSRSI-TDEQ 179 Query: 1184 LKELFAEFGTITSCKVMRDSN-GVNKGSGFVAFKSSEDATRALVAMNGKMV--GSKPLYV 1354 L+ +F ++G I ++RD + G +G F+ F E+A A+ A+N + G++PL V Sbjct: 180 LETIFGKYGQIVQKNILRDKHTGTPRGVAFIRFNKREEAQEAISALNNVIPEGGTQPLTV 239 Query: 1355 ALAQ 1366 +A+ Sbjct: 240 RVAE 243 Score = 55.5 bits (132), Expect = 1e-06 Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 1/82 (1%) Frame = +2 Query: 1124 NQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDAT 1300 N GTNL + L + D E L LF G I +C++MRD G + G GFV F S DA Sbjct: 75 NSGTNLIVNYLPQDMQDRE-LYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADAL 133 Query: 1301 RALVAMNGKMVGSKPLYVALAQ 1366 RA+ +NG V +K + V+ A+ Sbjct: 134 RAINNLNGITVRNKRIKVSFAR 155
>Q9NW13:RBM28_HUMAN RNA-binding protein 28 - Homo sapiens (Human)| Length = 759 Score = 87.4 bits (215), Expect = 2e-16 Identities = 96/427 (22%), Positives = 179/427 (41%), Gaps = 59/427 (13%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARAL--- 463 L+VG L S + QL ++FSQVG V V + ++ G+ YV FS D RAL Sbjct: 6 LFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALKEI 65 Query: 464 ---------------EMLNFTPVNGKPIRIMYSNRDPSSRKSGAAN----IFIKNLDKSI 586 ++ N T GK ++P ++K+ A+ + I+NL Sbjct: 66 TTFEGCKINVTVAKKKLRNKTKEKGKNENSECPKKEPKAKKAKVADKKARLIIRNLSFKC 125 Query: 587 DNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVY 766 L F+ FG +L + + G+ +G+GFVQ++ A A+ +N + + V Sbjct: 126 SEDDLKTVFAQFGAVLEVNIPRKPDGKMRGFGFVQFKNLLEAGKALKGMNMKEIKGRTVA 185 Query: 767 VGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSR 946 V V K + ++ + + + + ES ++++K+ + DD Sbjct: 186 VDWAVAKDKYKD---TQSVSAIGEEKSHESKHQESVKKKGREEEDMEEEENDDDDDDDDE 242 Query: 947 CFGFVNFENPDD--------------------------AVHAVEDLNGKKFDD----KEL 1036 G + E+ ++ + H+ ED + ++ D +EL Sbjct: 243 EDGVFDDEDEEEENIESKVTKPVQIQKRAVKRPAPAKSSDHSEEDSDLEESDSIDDGEEL 302 Query: 1037 YVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTI 1216 + + + ++ S +K K +D N+G ++++NL ++E+L EL +FG + Sbjct: 303 AQSDTSTEEQEDKAVQVSNKKKRKLPSDVNEGKTVFIRNLSFD-SEEEELGELLQQFGEL 361 Query: 1217 TSCK-VMRDSNGVNKGSGFVAFKSSEDATRALVAMN------GKMVGSKPLYVALAQRKE 1375 + V+ +KG F F + E A + L+A + G + + L V LA ++ Sbjct: 362 KYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLAASPENEAGGLKLDGRQLKVDLAVTRD 421 Query: 1376 ERRARLQ 1396 E A+LQ Sbjct: 422 E-AAKLQ 427 Score = 58.9 bits (141), Expect = 9e-08 Identities = 101/475 (21%), Positives = 176/475 (37%), Gaps = 107/475 (22%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L + +L + L VF+Q G+V+ V + R + +M G+ +V F + +A +AL+ + Sbjct: 116 LIIRNLSFKCSEDDLKTVFAQFGAVLEVNIPRKPDGKMR-GFGFVQFKNLLEAGKALKGM 174 Query: 473 NFTPVNGKPIRIMY-----------------------SNRDPSSRKSGAANIFIKNLDKS 583 N + G+ + + + S S +K G ++ + Sbjct: 175 NMKEIKGRTVAVDWAVAKDKYKDTQSVSAIGEEKSHESKHQESVKKKGREEEDMEEEEND 234 Query: 584 IDNK------ALYDTFSAFGNILSCKV---------ATEMSGESKGYGFVQYEQDESAQN 718 D+ ++D + KV A + +K + + D + Sbjct: 235 DDDDDDDEEDGVFDDEDEEEENIESKVTKPVQIQKRAVKRPAPAKSSDHSEEDSDLEESD 294 Query: 719 AINELNGMLLND--------KKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNL 874 +I++ + +D K V V K++R+ + V+++NLS + E+ L Sbjct: 295 SIDDGEELAQSDTSTEEQEDKAVQVS---NKKKRKLPSDVNEGKTVFIRNLSFDSEEEEL 351 Query: 875 KELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHAV------EDLNGKKFDDKE 1033 EL FG + V IV+ D S+ F F + A + + G K D ++ Sbjct: 352 GELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLAASPENEAGGLKLDGRQ 411 Query: 1034 LYVGRAQKKSER--------------------------------------EMQLKESFEK 1099 L V A + E +M +E FE Sbjct: 412 LKVDLAVTRDEAAKLQTTKVKKPTGTRNLYLAREGLIRAGTKAAEGVSAADMAKRERFEL 471 Query: 1100 -SNKETADRN---QGTNLYLKNLDGSVDDDEKLKELFA----EFGT-ITSCKVMRDSNGV 1252 +++ D+N T L L NL +VDD + K L + E G I C+VMRD GV Sbjct: 472 LKHQKLKDQNIFVSRTRLCLHNLPKAVDDKQLRKLLLSATSGEKGVRIKECRVMRDLKGV 531 Query: 1253 -------NKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRARLQ 1396 + G F F+ E A +AL +N PL + + E R +L+ Sbjct: 532 HGNMKGQSLGYAFAEFQEHEHALKALRLINNNPEIFGPLKRPIVEFSLEDRRKLK 586
>P25555:GBP2_YEAST Single-strand telomeric DNA-binding protein GBP2 - Saccharomyces| cerevisiae (Baker's yeast) Length = 427 Score = 87.0 bits (214), Expect = 3e-16 Identities = 79/317 (24%), Positives = 142/317 (44%), Gaps = 37/317 (11%) Frame = +2 Query: 530 SSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDES 709 +++++ +IF++NL + L + F G ++ + T G +G G V++ ++ES Sbjct: 115 ATKRNFENSIFVRNLTFDCTPEDLKELFGTVGEVVEADIITS-KGHHRGMGTVEFTKNES 173 Query: 710 AQNAINELNGMLLNDKKVYVGP----------FVRKQERENVFGSPKFNNVYVKNLSEST 859 Q+AI++ +G L D+K+ V F +K RE + + V++ NL S Sbjct: 174 VQDAISKFDGALFMDRKLMVRQDNPPPEAAKEFSKKATREEIDNGFE---VFIINLPYSM 230 Query: 860 TEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELY 1039 +LK++F G + V +G SR FG V + D+ + A++ NG + + + L Sbjct: 231 NWQSLKDMFKECGHVLRADVELDFNGFSRGFGSVIYPTEDEMIRAIDTFNGMEVEGRVLE 290 Query: 1040 V--GRAQKK--SEREMQLKESFEKSN--------------KETADR-NQGTN-------- 1138 V GR K+ ++R Q +E E + ETA + +G N Sbjct: 291 VREGRFNKRKNNDRYNQRREDLEDTRGTEPGLAQDAAVHIDETAAKFTEGVNPGGDRNCF 350 Query: 1139 LYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAM 1318 +Y NL S + L +LF G I + ++ NG G V +++ DA + + Sbjct: 351 IYCSNLPFSTARSD-LFDLFGPIGKINNAELKPQENGQPTGVAVVEYENLVDADFCIQKL 409 Query: 1319 NGKMVGSKPLYVALAQR 1369 N G L ++ A+R Sbjct: 410 NNYNYGGCSLQISYARR 426 Score = 78.6 bits (192), Expect = 1e-13 Identities = 58/199 (29%), Positives = 98/199 (49%), Gaps = 3/199 (1%) Frame = +2 Query: 767 VGPFVRKQERENVFGSPKFN---NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDG 937 +GP V + + E F + K N +++V+NL+ T ++LKELFG G + ++ G Sbjct: 101 LGPIVER-DLERQFDATKRNFENSIFVRNLTFDCTPEDLKELFGTVGEVVEADII-TSKG 158 Query: 938 KSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETA 1117 R G V F + A+ +G F D++L V + E KE +K+ +E Sbjct: 159 HHRGMGTVEFTKNESVQDAISKFDGALFMDRKLMVRQDNPPPE---AAKEFSKKATREEI 215 Query: 1118 DRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDA 1297 D G +++ NL S+ + + LK++F E G + V D NG ++G G V + + ++ Sbjct: 216 D--NGFEVFIINLPYSM-NWQSLKDMFKECGHVLRADVELDFNGFSRGFGSVIYPTEDEM 272 Query: 1298 TRALVAMNGKMVGSKPLYV 1354 RA+ NG V + L V Sbjct: 273 IRAIDTFNGMEVEGRVLEV 291 Score = 65.1 bits (157), Expect = 1e-09 Identities = 66/305 (21%), Positives = 117/305 (38%), Gaps = 50/305 (16%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 ++V +L L ++F VG VV + +G V F+ A+ Sbjct: 124 IFVRNLTFDCTPEDLKELFGTVGEVVEADIITSKGHHRGMGT--VEFTKNESVQDAISKF 181 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKS-----------GAANIFIKNLDKSIDNKALYDTFSA 619 + + + + N P + K +FI NL S++ ++L D F Sbjct: 182 DGALFMDRKLMVRQDNPPPEAAKEFSKKATREEIDNGFEVFIINLPYSMNWQSLKDMFKE 241 Query: 620 FGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDK--KVYVGPF----- 778 G++L V + +G S+G+G V Y ++ AI+ NGM + + +V G F Sbjct: 242 CGHVLRADVELDFNGFSRGFGSVIYPTEDEMIRAIDTFNGMEVEGRVLEVREGRFNKRKN 301 Query: 779 -----VRKQERENVFG----------------SPKFNN-----------VYVKNLSESTT 862 R+++ E+ G + KF +Y NL ST Sbjct: 302 NDRYNQRREDLEDTRGTEPGLAQDAAVHIDETAAKFTEGVNPGGDRNCFIYCSNLPFSTA 361 Query: 863 EDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYV 1042 +L +LFG G I + + ++G+ V +EN DA ++ LN + L + Sbjct: 362 RSDLFDLFGPIGKINNAELKPQENGQPTGVAVVEYENLVDADFCIQKLNNYNYGGCSLQI 421 Query: 1043 GRAQK 1057 A++ Sbjct: 422 SYARR 426
>P23241:ELAV_DROVI Protein elav - Drosophila virilis (Fruit fly)| Length = 519 Score = 86.7 bits (213), Expect = 4e-16 Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 16/182 (8%) Frame = +2 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVR--------------ADDGKSRCFGFVN 964 N+ V L ++ TED ++ LF + G I SV ++R G+S +GFVN Sbjct: 186 NLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVN 245 Query: 965 FENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLY 1144 + P DA AV LNG + +K + V A+ S D +G NLY Sbjct: 246 YVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSS------------------DAIKGANLY 287 Query: 1145 LKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNG--VNKGSGFVAFKSSEDATRALVAM 1318 + L ++ E L+ +FA FG I + ++++++ KG GF+ F E+ATRA++A+ Sbjct: 288 VSGLPKTMTQQE-LEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIAL 346 Query: 1319 NG 1324 NG Sbjct: 347 NG 348 Score = 78.6 bits (192), Expect = 1e-13 Identities = 48/164 (29%), Positives = 86/164 (52%), Gaps = 15/164 (9%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNT-------------RMSLGYAYVNF 433 L V L ++ + ++ +FS VG + SV++ RD + SLGY +VN+ Sbjct: 187 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 246 Query: 434 SSPADAARALEMLNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTF 613 P DA +A+ +LN + K I++ ++ PSS AN+++ L K++ + L F Sbjct: 247 VRPQDAEQAVNVLNGLRLQNKTIKVSFAR--PSSDAIKGANLYVSGLPKTMTQQELEAIF 304 Query: 614 SAFGNILSCKVATEMSG--ESKGYGFVQYEQDESAQNAINELNG 739 + FG I++ ++ ++KG GF+++++ E A AI LNG Sbjct: 305 APFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 348 Score = 74.7 bits (182), Expect = 2e-12 Identities = 52/169 (30%), Positives = 86/169 (50%), Gaps = 16/169 (9%) Frame = +2 Query: 554 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMS--------------GESKGYGFVQ 691 N+ + L +++ + FS+ G I S K+ + S G+S GYGFV Sbjct: 186 NLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVN 245 Query: 692 YEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDN 871 Y + + A+ A+N LNG+ L +K + V F R + K N+YV L ++ T+ Sbjct: 246 YVRPQDAEQAVNVLNGLRLQNKTIKVS-FARPSS-----DAIKGANLYVSGLPKTMTQQE 299 Query: 872 LKELFGNFGP-ITSVIVVRA-DDGKSRCFGFVNFENPDDAVHAVEDLNG 1012 L+ +F FG ITS I+ A +D +++ GF+ F+ ++A A+ LNG Sbjct: 300 LEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 348 Score = 49.7 bits (117), Expect = 5e-05 Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 10/111 (9%) Frame = +2 Query: 467 MLNFTPVNGKPIRIMYSN---------RDPSSRKSGAANIFIKNLDKSIDNKALYDTFSA 619 + F+P+ G + +M N +S GA IFI NL + AL+ F Sbjct: 401 LARFSPMAGDMLDVMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEAALWQLFGP 460 Query: 620 FGNILSCKVATE-MSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYV 769 FG + S K+ + + + KGYGFV + A AI LNG + ++ + V Sbjct: 461 FGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNGYTMGNRVLQV 511 Score = 48.1 bits (113), Expect = 2e-04 Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 2/81 (2%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRC--FGFVNFENPDDAVHAVED 1003 +++ NL+ T E L +LFG FG + SV +V+ D ++C +GFV+ N D+A A+ Sbjct: 440 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVK-DPTTNQCKGYGFVSMTNYDEAAMAIRA 498 Query: 1004 LNGKKFDDKELYVGRAQKKSE 1066 LNG ++ L V K++ Sbjct: 499 LNGYTMGNRVLQVSFKTNKAK 519 Score = 43.1 bits (100), Expect = 0.005 Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 1/68 (1%) Frame = +2 Query: 1172 DDEKLKELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPL 1348 ++ L +LF FG + S K+++D + KG GFV+ + ++A A+ A+NG +G++ L Sbjct: 450 EEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNGYTMGNRVL 509 Query: 1349 YVALAQRK 1372 V+ K Sbjct: 510 QVSFKTNK 517 Score = 42.7 bits (99), Expect = 0.007 Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 14/103 (13%) Frame = +2 Query: 1100 SNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD------------- 1240 SN T R TNL + L ++ +DE ++ LF+ G I S K++RD Sbjct: 177 SNGSTETR---TNLIVNYLPQTMTEDE-IRSLFSSVGEIESVKLIRDKSQVYIDPLNPQA 232 Query: 1241 -SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQ 1366 S G + G GFV + +DA +A+ +NG + +K + V+ A+ Sbjct: 233 PSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFAR 275
>P16914:ELAV_DROME Protein elav - Drosophila melanogaster (Fruit fly)| Length = 483 Score = 86.7 bits (213), Expect = 4e-16 Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 16/182 (8%) Frame = +2 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVR--------------ADDGKSRCFGFVN 964 N+ V L ++ TED ++ LF + G I SV ++R G+S +GFVN Sbjct: 150 NLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVN 209 Query: 965 FENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLY 1144 + P DA AV LNG + +K + V A+ S D +G NLY Sbjct: 210 YVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSS------------------DAIKGANLY 251 Query: 1145 LKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNG--VNKGSGFVAFKSSEDATRALVAM 1318 + L ++ E L+ +FA FG I + ++++++ KG GF+ F E+ATRA++A+ Sbjct: 252 VSGLPKTMTQQE-LEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIAL 310 Query: 1319 NG 1324 NG Sbjct: 311 NG 312 Score = 78.6 bits (192), Expect = 1e-13 Identities = 48/164 (29%), Positives = 86/164 (52%), Gaps = 15/164 (9%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNT-------------RMSLGYAYVNF 433 L V L ++ + ++ +FS VG + SV++ RD + SLGY +VN+ Sbjct: 151 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 210 Query: 434 SSPADAARALEMLNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTF 613 P DA +A+ +LN + K I++ ++ PSS AN+++ L K++ + L F Sbjct: 211 VRPQDAEQAVNVLNGLRLQNKTIKVSFAR--PSSDAIKGANLYVSGLPKTMTQQELEAIF 268 Query: 614 SAFGNILSCKVATEMSG--ESKGYGFVQYEQDESAQNAINELNG 739 + FG I++ ++ ++KG GF+++++ E A AI LNG Sbjct: 269 APFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 312 Score = 74.7 bits (182), Expect = 2e-12 Identities = 52/169 (30%), Positives = 86/169 (50%), Gaps = 16/169 (9%) Frame = +2 Query: 554 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMS--------------GESKGYGFVQ 691 N+ + L +++ + FS+ G I S K+ + S G+S GYGFV Sbjct: 150 NLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVN 209 Query: 692 YEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDN 871 Y + + A+ A+N LNG+ L +K + V F R + K N+YV L ++ T+ Sbjct: 210 YVRPQDAEQAVNVLNGLRLQNKTIKVS-FARPSS-----DAIKGANLYVSGLPKTMTQQE 263 Query: 872 LKELFGNFGP-ITSVIVVRA-DDGKSRCFGFVNFENPDDAVHAVEDLNG 1012 L+ +F FG ITS I+ A +D +++ GF+ F+ ++A A+ LNG Sbjct: 264 LEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 312 Score = 49.7 bits (117), Expect = 5e-05 Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 10/111 (9%) Frame = +2 Query: 467 MLNFTPVNGKPIRIMYSN---------RDPSSRKSGAANIFIKNLDKSIDNKALYDTFSA 619 + F+P+ G + +M N +S GA IFI NL + AL+ F Sbjct: 365 LARFSPMAGDMLDVMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEAALWQLFGP 424 Query: 620 FGNILSCKVATE-MSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYV 769 FG + S K+ + + + KGYGFV + A AI LNG + ++ + V Sbjct: 425 FGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNGYTMGNRVLQV 475 Score = 48.1 bits (113), Expect = 2e-04 Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 2/81 (2%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRC--FGFVNFENPDDAVHAVED 1003 +++ NL+ T E L +LFG FG + SV +V+ D ++C +GFV+ N D+A A+ Sbjct: 404 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVK-DPTTNQCKGYGFVSMTNYDEAAMAIRA 462 Query: 1004 LNGKKFDDKELYVGRAQKKSE 1066 LNG ++ L V K++ Sbjct: 463 LNGYTMGNRVLQVSFKTNKAK 483 Score = 43.1 bits (100), Expect = 0.005 Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 1/68 (1%) Frame = +2 Query: 1172 DDEKLKELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPL 1348 ++ L +LF FG + S K+++D + KG GFV+ + ++A A+ A+NG +G++ L Sbjct: 414 EEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNGYTMGNRVL 473 Query: 1349 YVALAQRK 1372 V+ K Sbjct: 474 QVSFKTNK 481 Score = 42.7 bits (99), Expect = 0.007 Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 14/103 (13%) Frame = +2 Query: 1100 SNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD------------- 1240 SN T R TNL + L ++ +DE ++ LF+ G I S K++RD Sbjct: 141 SNGSTETR---TNLIVNYLPQTMTEDE-IRSLFSSVGEIESVKLIRDKSQVYIDPLNPQA 196 Query: 1241 -SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQ 1366 S G + G GFV + +DA +A+ +NG + +K + V+ A+ Sbjct: 197 PSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFAR 239
>Q08935:ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 273 Score = 86.3 bits (212), Expect = 5e-16 Identities = 56/182 (30%), Positives = 92/182 (50%), Gaps = 11/182 (6%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFVQYEQDESAQNAINEL 733 IF+ NL S D+ AL + F GN+ +V + ++G S+G+GFV E + A + Sbjct: 89 IFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQF 148 Query: 734 NGMLLNDKKVYV--GPFVRKQERENVFGSPK-------FNNVYVKNLSESTTEDNLKELF 886 NG L+ + + V GP K+E + G + N VYV NL+ +D L+ LF Sbjct: 149 NGYELDGRALRVNSGPPPEKRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLF 208 Query: 887 GNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKS 1063 G + +V D G+SR FGFV + + ++ +A+E L+G + + + V A+ + Sbjct: 209 SEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARP 268 Query: 1064 ER 1069 R Sbjct: 269 PR 270 Score = 85.5 bits (210), Expect = 9e-16 Identities = 54/175 (30%), Positives = 86/175 (49%), Gaps = 14/175 (8%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 ++VG+L S A L ++F + G+V V V D T S G+ +V SS + A + Sbjct: 89 IFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQF 148 Query: 473 NFTPVNGKPIRIMYS----NRDPSSRKSGAAN---------IFIKNLDKSIDNKALYDTF 613 N ++G+ +R+ R+ SS + G+ +++ NL +D AL F Sbjct: 149 NGYELDGRALRVNSGPPPEKRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLF 208 Query: 614 SAFGNILSCKVATEM-SGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGP 775 S G ++ KV + SG S+G+GFV Y E NAI L+G+ LN + + V P Sbjct: 209 SEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSP 263 Score = 80.5 bits (197), Expect = 3e-14 Identities = 55/187 (29%), Positives = 92/187 (49%), Gaps = 2/187 (1%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVHAVEDL 1006 ++V NL S L ELF G + V V+ G+SR FGFV + ++ A + Sbjct: 89 IFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQF 148 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 NG + D + L V +RE SF ++ + +Y+ NL VD D L Sbjct: 149 NGYELDGRALRVNSGPPPEKRE---NSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQD-AL 204 Query: 1187 KELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALA 1363 + LF+E G + KV+ D +G ++G GFV + S+E+ A+ +++G + + + V+ A Sbjct: 205 ETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPA 264 Query: 1364 QRKEERR 1384 + + RR Sbjct: 265 EARPPRR 271 Score = 50.1 bits (118), Expect = 4e-05 Identities = 27/83 (32%), Positives = 45/83 (54%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 +YVG+L V L +FS+ G VV +V D ++ S G+ +V +SS + A+E L Sbjct: 190 VYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESL 249 Query: 473 NFTPVNGKPIRIMYSNRDPSSRK 541 + +NG+ IR+ + P R+ Sbjct: 250 DGVDLNGRAIRVSPAEARPPRRQ 272
>Q06106:MRD1_YEAST Multiple RNA-binding domain-containing protein 1 - Saccharomyces| cerevisiae (Baker's yeast) Length = 887 Score = 85.9 bits (211), Expect = 7e-16 Identities = 78/283 (27%), Positives = 131/283 (46%), Gaps = 33/283 (11%) Frame = +2 Query: 431 FSSPADAARALEMLNFT-------PVNGKPIR--IMYSNRDPSSRKSGA----------A 553 F+ PA+A +++N T PV KP +M +N+D + S A Sbjct: 607 FTKPAEAD---DLINNTSAKEEENPVEVKPSSNDLMEANKDVTEGSSNAHDEDVIDGPTV 663 Query: 554 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGE------SKGYGFVQYEQDESAQ 715 +IFIKNL+ S N+ L D F F + +V T+ + S G+GFV++ E A Sbjct: 664 SIFIKNLNFSTTNQNLTDRFKVFTGFVVAQVKTKPDPKHQGKTLSMGFGFVEFRTKEQAN 723 Query: 716 NAINELNGMLLNDKKVYVGPFVRKQEREN---VFGSPKFNNVYVKNLSESTTEDNLKELF 886 I ++G +++ K+ + R+ + + K + VKNL T ++ ELF Sbjct: 724 AVIAAMDGTVIDGHKIQLKLSHRQASQSGNTKTKSNKKSGKIIVKNLPFEATRKDVFELF 783 Query: 887 GNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKS- 1063 +FG + SV V + D +R F FV F P +A +A++ L+G + L + A++ + Sbjct: 784 NSFGQLKSVRVPKKFDKSARGFAFVEFLLPKEAENAMDQLHGVHLLGRRLVMQYAEEDAV 843 Query: 1064 EREMQLKESFEKSNKETADRNQGTNLYLKNLDG----SVDDDE 1180 + E ++ +K K+ A L+N G VDD+E Sbjct: 844 DAEEEIARMTKKVRKQVATNEMAA---LRNGGGRKKLDVDDEE 883 Score = 64.3 bits (155), Expect = 2e-09 Identities = 57/212 (26%), Positives = 90/212 (42%), Gaps = 25/212 (11%) Frame = +2 Query: 824 NNVYVKNLSESTTEDNLKELF-------------GNFGP--ITSVIVVRADDGKSRCFGF 958 + + VK L T+DNL+E F GP IT V ++R +G+SR FGF Sbjct: 2 SRIIVKGLPVYLTDDNLREHFTKRLRQKHSHQAVNGSGPDLITDVKILRDRNGESRRFGF 61 Query: 959 VNFENPDDAVHAVEDLNGKKFDDKELYVGRAQK----------KSEREMQLKESFEKSNK 1108 + + N +DA AVE NG + ++ V A+ K +R LK EK K Sbjct: 62 IGYRNEEDAFDAVEYFNGSFINTSKIEVSMAKSFADPRVPQPMKEKRREALKRFREKEEK 121 Query: 1109 ETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSS 1288 + N+ +N ++DD+ + + EF + M+ S+ V KS Sbjct: 122 LLQEENRKKKKVDENKHSNIDDEIRKNKQLQEF-----METMKPSSQVTSWEKVGIDKSI 176 Query: 1289 EDATRALVAMNGKMVGSKPLYVALAQRKEERR 1384 ED + + G+ L ALA ++E + Sbjct: 177 EDEKLKREEEDSSVQGNSLLAHALALKEENNK 208 Score = 61.6 bits (148), Expect = 1e-08 Identities = 86/413 (20%), Positives = 156/413 (37%), Gaps = 53/413 (12%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++ ++ + ++ +FS G + V V D T S G+AYV F +A A L Sbjct: 347 LFLRNILYTSKEEDFRKLFSPFGELEEVHVALDTRTGQSKGFAYVLFKDSKNAVNAYVEL 406 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNL----DKSIDNKALYD--TFSAFGNIL 634 + G+ + I+ S R +KN+ K + KA TFS + Sbjct: 407 DKQIFQGRLLHILPGEEKKSHRLD---EFDLKNMPLKKQKELKRKAAASRQTFSWNSLYM 463 Query: 635 SCKVATEMSGESKGYGFVQYEQDESAQNAINEL--NGMLLNDKKVYVGPFVRKQERENVF 808 + G Q E++ +A+ + ++ D + Y F K F Sbjct: 464 NQDAVLGSVAAKLGLEKSQLIDAENSSSAVKQALAEAHVIGDVRKY---FESKGVDLTKF 520 Query: 809 GSPKFNN------VYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFE 970 K N + VKN TT + L E+F +G + +++ A V F Sbjct: 521 SQLKSTNQRDDKVILVKNFPFGTTREELGEMFLPYGKLERLLMPPAGT-----IAIVQFR 575 Query: 971 NPDDAVHAVEDLNGKKFDDKELYVGR-------------------AQKKSEREMQLKESF 1093 + A A L+ K+F D +Y+ R + K+ E +++K S Sbjct: 576 DTTSARAAFTKLSYKRFKDGIIYLERGPKDCFTKPAEADDLINNTSAKEEENPVEVKPSS 635 Query: 1094 EKSNKETADRNQGTN--------------LYLKNLDGSVDDDEKLKELFAEFGTITSCKV 1231 + D +G++ +++KNL+ S + + L + F F +V Sbjct: 636 NDLMEANKDVTEGSSNAHDEDVIDGPTVSIFIKNLNFSTTN-QNLTDRFKVFTGFVVAQV 694 Query: 1232 M------RDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRK 1372 ++ G GFV F++ E A + AM+G ++ + + L+ R+ Sbjct: 695 KTKPDPKHQGKTLSMGFGFVEFRTKEQANAVIAAMDGTVIDGHKIQLKLSHRQ 747 Score = 55.8 bits (133), Expect = 8e-07 Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 10/209 (4%) Frame = +2 Query: 797 ENVFGSPKFNNVYVKNLSESTTEDNLKELFGNF-GPITSVIVVRAD---DGK--SRCFGF 958 E+V P + +++KNL+ STT NL + F F G + + + + D GK S FGF Sbjct: 655 EDVIDGPTVS-IFIKNLNFSTTNQNLTDRFKVFTGFVVAQVKTKPDPKHQGKTLSMGFGF 713 Query: 959 VNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTN 1138 V F + A + ++G D ++ + ++ +++ + N +T + Sbjct: 714 VEFRTKEQANAVIAAMDGTVIDGHKIQL---------KLSHRQASQSGNTKTKSNKKSGK 764 Query: 1139 LYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAM 1318 + +KNL + ELF FG + S +V + + +G FV F ++A A+ + Sbjct: 765 IIVKNLPFEATRKDVF-ELFNSFGQLKSVRVPKKFDKSARGFAFVEFLLPKEAENAMDQL 823 Query: 1319 NGKMVGSKPLYVALAQR----KEERRARL 1393 +G + + L + A+ EE AR+ Sbjct: 824 HGVHLLGRRLVMQYAEEDAVDAEEEIARM 852 Score = 42.7 bits (99), Expect = 0.007 Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 10/71 (14%) Frame = +2 Query: 1214 ITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQ--------- 1366 IT K++RD NG ++ GF+ +++ EDA A+ NG + + + V++A+ Sbjct: 43 ITDVKILRDRNGESRRFGFIGYRNEEDAFDAVEYFNGSFINTSKIEVSMAKSFADPRVPQ 102 Query: 1367 -RKEERRARLQ 1396 KE+RR L+ Sbjct: 103 PMKEKRREALK 113 Score = 39.3 bits (90), Expect = 0.074 Identities = 16/47 (34%), Positives = 27/47 (57%) Frame = +2 Query: 629 ILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYV 769 I K+ + +GES+ +GF+ Y +E A +A+ NG +N K+ V Sbjct: 43 ITDVKILRDRNGESRRFGFIGYRNEEDAFDAVEYFNGSFINTSKIEV 89
>P27476:NSR1_YEAST Nuclear localization sequence-binding protein - Saccharomyces| cerevisiae (Baker's yeast) Length = 414 Score = 85.5 bits (210), Expect = 9e-16 Identities = 52/191 (27%), Positives = 92/191 (48%), Gaps = 12/191 (6%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 ++VG L S+ D L F +G V+ RV + T S GY YV+F + + A +A++ + Sbjct: 170 IFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEM 229 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAA-----------NIFIKNLDKSIDNKALYDTFSA 619 ++G+PI S P+ A +F+ NL + D A+++ F+ Sbjct: 230 QGKEIDGRPINCDMSTSKPAGNNDRAKKFGDTPSEPSDTLFLGNLSFNADRDAIFELFAK 289 Query: 620 FGNILSCKVATEMSGES-KGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQER 796 G ++S ++ T E KG+G+VQ+ E A+ A++ L G ++++ V + Sbjct: 290 HGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNRPVRLD-------- 341 Query: 797 ENVFGSPKFNN 829 F SP+ NN Sbjct: 342 ---FSSPRPNN 349 Score = 75.9 bits (185), Expect = 7e-13 Identities = 53/176 (30%), Positives = 91/176 (51%), Gaps = 3/176 (1%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITS--VIVVRADDGKSRCFGFVNFENPDDAVHAVED 1003 ++V LS S ++ LK+ F + G + VI R D +SR +G+V+FEN A A+++ Sbjct: 170 IFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTD-RSRGYGYVDFENKSYAEKAIQE 228 Query: 1004 LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEK 1183 + GK+ D + + + K + F + E +D L+L NL + D D Sbjct: 229 MQGKEIDGRPINCDMSTSKPAGNNDRAKKFGDTPSEPSD-----TLFLGNLSFNADRD-A 282 Query: 1184 LKELFAEFGTITSCKV-MRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPL 1348 + ELFA+ G + S ++ KG G+V F + EDA +AL A+ G+ + ++P+ Sbjct: 283 IFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNRPV 338 Score = 75.5 bits (184), Expect = 9e-13 Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 9/169 (5%) Frame = +2 Query: 551 ANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYEQDESAQNAIN 727 A IF+ L SID++ L F G ++ +V E + S+GYG+V +E A+ AI Sbjct: 168 ATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQ 227 Query: 728 ELNGMLLNDKKVYVGPFVRK----QERENVFG---SPKFNNVYVKNLSESTTEDNLKELF 886 E+ G ++ + + K +R FG S + +++ NLS + D + ELF Sbjct: 228 EMQGKEIDGRPINCDMSTSKPAGNNDRAKKFGDTPSEPSDTLFLGNLSFNADRDAIFELF 287 Query: 887 GNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDK 1030 G + SV I + + + FG+V F N +DA A++ L G+ D++ Sbjct: 288 AKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNR 336 Score = 43.9 bits (102), Expect = 0.003 Identities = 27/110 (24%), Positives = 56/110 (50%), Gaps = 3/110 (2%) Frame = +2 Query: 1052 QKKSEREMQLKESFEKSNKE--TADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSC 1225 +K+ + + +E E SNK+ + + +++ L S+DD E LK+ F G + Sbjct: 139 KKRKSEDAEEEEDEESSNKKQKNEETEEPATIFVGRLSWSIDD-EWLKKEFEHIGGVIGA 197 Query: 1226 KVMRD-SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRK 1372 +V+ + ++G G+V F++ A +A+ M GK + +P+ ++ K Sbjct: 198 RVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEIDGRPINCDMSTSK 247
>Q9ZUU4:ROC1_ARATH Putative ribonucleoprotein At2g37220, chloroplast precursor -| Arabidopsis thaliana (Mouse-ear cress) Length = 289 Score = 84.7 bits (208), Expect = 2e-15 Identities = 57/185 (30%), Positives = 91/185 (49%), Gaps = 26/185 (14%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L+VG+L +V AQL +F G+V V V D T S G+ +V SS ++ A + Sbjct: 93 LFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQF 152 Query: 473 NFTPVNGKPIRIMYS----------NRDPSSR------------KSGAAN---IFIKNLD 577 N ++G+P+R+ +R P S SGA + +++ NL Sbjct: 153 NGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLS 212 Query: 578 KSIDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYEQDESAQNAINELNGMLLND 754 +D+ AL FS G ++ +V + SG SKG+GFV Y+ + QNAI L+G L+ Sbjct: 213 WGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDG 272 Query: 755 KKVYV 769 +++ V Sbjct: 273 RQIRV 277 Score = 75.5 bits (184), Expect = 9e-13 Identities = 50/199 (25%), Positives = 91/199 (45%), Gaps = 23/199 (11%) Frame = +2 Query: 542 SGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFVQYEQDESAQN 718 S +F+ NL ++D+ L F + GN+ +V + ++G S+G+GFV + Sbjct: 88 SADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEA 147 Query: 719 AINELNGMLLNDKKVYVGPFVRKQERENVF---------------------GSPKFNNVY 835 A + NG L+ + + V +RE+ F G+ N VY Sbjct: 148 AAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVY 207 Query: 836 VKNLSESTTEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHAVEDLNG 1012 V NLS + L+ LF G + ++ D G+S+ FGFV +++ + +A++ L+G Sbjct: 208 VGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDG 267 Query: 1013 KKFDDKELYVGRAQKKSER 1069 D +++ V A+ + R Sbjct: 268 ADLDGRQIRVSEAEARPPR 286 Score = 72.4 bits (176), Expect = 8e-12 Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 11/196 (5%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVHAVEDL 1006 ++V NL + L +LF + G + V V+ G+SR FGFV + + A + Sbjct: 93 LFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQF 152 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQL----KESFEKSNKET-----ADRNQGTNLYLKNLD 1159 NG + D + L V +RE + SF S + G +Y+ NL Sbjct: 153 NGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLS 212 Query: 1160 GSVDDDEKLKELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATRALVAMNGKMVG 1336 VDD L+ LF+E G + +V+ D +G +KG GFV + SS++ A+ +++G + Sbjct: 213 WGVDD-MALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLD 271 Query: 1337 SKPLYVALAQRKEERR 1384 + + V+ A+ + RR Sbjct: 272 GRQIRVSEAEARPPRR 287 Score = 50.8 bits (120), Expect = 2e-05 Identities = 26/83 (31%), Positives = 45/83 (54%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 +YVG+L V D L +FS+ G VV RV D ++ S G+ +V + S + A++ L Sbjct: 206 VYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSL 265 Query: 473 NFTPVNGKPIRIMYSNRDPSSRK 541 + ++G+ IR+ + P R+ Sbjct: 266 DGADLDGRQIRVSEAEARPPRRQ 288
>P37838:NOP4_YEAST Nucleolar protein 4 - Saccharomyces cerevisiae (Baker's yeast)| Length = 685 Score = 83.6 bits (205), Expect = 3e-15 Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 19/210 (9%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLN 1009 ++V+++ + T++ L + F NF PI +VV+ + +SR FGFV+F DD A+ Sbjct: 28 LFVRSIPQDVTDEQLADFFSNFAPIKHAVVVKDTNKRSRGFGFVSFAVEDDTKEALAKAR 87 Query: 1010 GKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTN----------------- 1138 KF+ L V A K+ +R + E EKS E++++ G N Sbjct: 88 KTKFNGHILRVDIA-KRRDRSKKTSEVVEKSTPESSEKITGQNNEDEDDADGEDSMLKGK 146 Query: 1139 --LYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALV 1312 L ++N+ S D KLK++F +GT+ + R +G G FV K + AL Sbjct: 147 PKLIIRNMPWSCRDPVKLKKIFGRYGTVVEATIPRKRDGKLCGFAFVTMKKISNCRIALE 206 Query: 1313 AMNGKMVGSKPLYVALAQRKEERRARLQAQ 1402 + + + V A +K +AQ Sbjct: 207 NTKDLKIDGRKVAVDFAVQKNRWEDYKKAQ 236 Score = 70.1 bits (170), Expect = 4e-11 Identities = 74/339 (21%), Positives = 132/339 (38%), Gaps = 73/339 (21%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAI---- 724 +F++++ + + ++ L D FS F I V + + S+G+GFV + ++ + A+ Sbjct: 28 LFVRSIPQDVTDEQLADFFSNFAPIKHAVVVKDTNKRSRGFGFVSFAVEDDTKEALAKAR 87 Query: 725 -NELNGMLLN-------DKKVYVGPFVRKQEREN---------------------VFGSP 817 + NG +L D+ V K E+ + G P Sbjct: 88 KTKFNGHILRVDIAKRRDRSKKTSEVVEKSTPESSEKITGQNNEDEDDADGEDSMLKGKP 147 Query: 818 KFNNVYVKNLSESTTED-NLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHA 994 K + ++N+ S + LK++FG +G + + R DGK F FV + + A Sbjct: 148 K---LIIRNMPWSCRDPVKLKKIFGRYGTVVEATIPRKRDGKLCGFAFVTMKKISNCRIA 204 Query: 995 VEDLNGKKFDDKELYVGRA--------QKKSEREMQLKESFEKSNKETADRNQGTNLYLK 1150 +E+ K D +++ V A KK++ EM K+ E N++ + + + Sbjct: 205 LENTKDLKIDGRKVAVDFAVQKNRWEDYKKAQPEMNDKDDNESGNEDAEENHDDEEDENE 264 Query: 1151 NLDGSVDDDEKLKEL------------------------------FAEFGTIT-SCKVMR 1237 D VD K KE F++FG++ + V+ Sbjct: 265 EEDRQVDQASKNKESKRKAQNKREDFSVFVRNVPYDATEESLAPHFSKFGSVKYALPVID 324 Query: 1238 DSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYV 1354 S G+ KG+ FVAFK + N GS L + Sbjct: 325 KSTGLAKGTAFVAFKDQYTYNECI--KNAPAAGSTSLLI 361
>P49313:ROC1_NICPL 30 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| plumbaginifolia (Leadwort-leaved tobacco) Length = 279 Score = 82.4 bits (202), Expect = 8e-15 Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 17/188 (9%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFVQYEQDESAQNAINEL 733 IF+ NL S D+ AL + F GN+ +V + ++G S+G+GFV E + A + Sbjct: 89 IFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQF 148 Query: 734 NGMLLNDKKVYV--GPFVRKQERENVFGSPKF-------------NNVYVKNLSESTTED 868 NG L+ + + V GP K+E + + F N VYV NL+ +D Sbjct: 149 NGYELDGRALRVNSGPPPEKRENSSFRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQD 208 Query: 869 NLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVG 1045 L+ LF G + +V D G+SR FGFV + + ++ +A+E L+G + + + V Sbjct: 209 ALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVS 268 Query: 1046 RAQKKSER 1069 A+ + R Sbjct: 269 PAEARPPR 276 Score = 82.4 bits (202), Expect = 8e-15 Identities = 55/181 (30%), Positives = 87/181 (48%), Gaps = 20/181 (11%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 ++VG+L S A L ++F + G+V V V D T S G+ +V SS + A + Sbjct: 89 IFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQF 148 Query: 473 NFTPVNGKPIRIMY----------SNRDPSSRKSGAAN---------IFIKNLDKSIDNK 595 N ++G+ +R+ S R+ SS + G+ +++ NL +D Sbjct: 149 NGYELDGRALRVNSGPPPEKRENSSFRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQD 208 Query: 596 ALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVG 772 AL FS G ++ KV + SG S+G+GFV Y E NAI L+G+ LN + + V Sbjct: 209 ALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVS 268 Query: 773 P 775 P Sbjct: 269 P 269 Score = 79.3 bits (194), Expect = 6e-14 Identities = 54/190 (28%), Positives = 93/190 (48%), Gaps = 5/190 (2%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVHAVEDL 1006 ++V NL S L ELF G + V V+ G+SR FGFV + ++ A + Sbjct: 89 IFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQF 148 Query: 1007 NGKKFDDKELYVGRA---QKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDD 1177 NG + D + L V +K+ + SF ++ + +Y+ NL VD D Sbjct: 149 NGYELDGRALRVNSGPPPEKRENSSFRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQD 208 Query: 1178 EKLKELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYV 1354 L+ LF+E G + KV+ D +G ++G GFV + S+E+ A+ +++G + + + V Sbjct: 209 -ALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRV 267 Query: 1355 ALAQRKEERR 1384 + A+ + RR Sbjct: 268 SPAEARPPRR 277 Score = 50.1 bits (118), Expect = 4e-05 Identities = 27/83 (32%), Positives = 45/83 (54%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 +YVG+L V L +FS+ G VV +V D ++ S G+ +V +SS + A+E L Sbjct: 196 VYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESL 255 Query: 473 NFTPVNGKPIRIMYSNRDPSSRK 541 + +NG+ IR+ + P R+ Sbjct: 256 DGVDLNGRAIRVSPAEARPPRRQ 278
>P49314:ROC2_NICPL 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| plumbaginifolia (Leadwort-leaved tobacco) Length = 292 Score = 82.0 bits (201), Expect = 1e-14 Identities = 60/209 (28%), Positives = 93/209 (44%), Gaps = 30/209 (14%) Frame = +2 Query: 536 RKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFVQYEQDESA 712 R S +F+ NL S+D+ AL F GN+ +V + +SG S+G+GFV E Sbjct: 83 RFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEV 142 Query: 713 QNAINELNGMLLNDKKVYV--GPFVRKQERENVFGS------------------------ 814 + A + NG ++ + + V GP K+E + G Sbjct: 143 EAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGR 202 Query: 815 --PKFNNVYVKNLSESTTEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDA 985 N VYV NLS + LKELF G + +V D G+SR FGFV + + + Sbjct: 203 SVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEV 262 Query: 986 VHAVEDLNGKKFDDKELYVGRAQKKSERE 1072 A++ LNG D + + V A+++ R+ Sbjct: 263 NDAIDSLNGIDLDGRSIRVSAAEERPRRQ 291 Score = 72.0 bits (175), Expect = 1e-11 Identities = 59/230 (25%), Positives = 102/230 (44%), Gaps = 21/230 (9%) Frame = +2 Query: 758 KVYVGPFVRKQERENVFGSPKFNN---VYVKNLSESTTEDNLKELFGNFGPITSVIVVRA 928 +V + F + ++ V P+F+ ++V NL S L LF G + V V+ Sbjct: 63 RVALSDFDQLEDDVEVAEQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYD 122 Query: 929 D-DGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSN 1105 G+SR FGFV ++ A + NG + D + + V ++RE N Sbjct: 123 KLSGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGN 182 Query: 1106 KETADRNQGTN----------------LYLKNLDGSVDDDEKLKELFAEFGTITSCKVMR 1237 G + +Y+ NL VDD LKELF+E G + KV+ Sbjct: 183 SSYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDD-LALKELFSEQGNVVDAKVVY 241 Query: 1238 D-SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERR 1384 D +G ++G GFV + S+++ A+ ++NG + + + V+ A+ + R+ Sbjct: 242 DRDSGRSRGFGFVTYSSAKEVNDAIDSLNGIDLDGRSIRVSAAEERPRRQ 291 Score = 52.0 bits (123), Expect = 1e-05 Identities = 26/79 (32%), Positives = 46/79 (58%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 +YVG+L V D L ++FS+ G+VV +V D ++ S G+ +V +SS + A++ L Sbjct: 210 VYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDSL 269 Query: 473 NFTPVNGKPIRIMYSNRDP 529 N ++G+ IR+ + P Sbjct: 270 NGIDLDGRSIRVSAAEERP 288
>P32588:PUB1_YEAST Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 -| Saccharomyces cerevisiae (Baker's yeast) Length = 453 Score = 82.0 bits (201), Expect = 1e-14 Identities = 56/183 (30%), Positives = 100/183 (54%), Gaps = 1/183 (0%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLN 1009 +YV NL ++ TED LK+ F GPI ++ ++ + K+ + FV + DA A++ LN Sbjct: 77 LYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQTLN 136 Query: 1010 GKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLK 1189 GK+ ++ + + A +S + S+ +T NL++ +L+ +V DDE L+ Sbjct: 137 GKQIENNIVKINWA----------FQSQQSSSDDT------FNLFVGDLNVNV-DDETLR 179 Query: 1190 ELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQ 1366 F +F + S VM D G ++G GFV+F S +DA A+ +M G+ + +PL + A Sbjct: 180 NAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAA 239 Query: 1367 RKE 1375 +++ Sbjct: 240 KRD 242 Score = 77.4 bits (189), Expect = 2e-13 Identities = 51/212 (24%), Positives = 99/212 (46%), Gaps = 1/212 (0%) Frame = +2 Query: 506 IMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGF 685 ++ +N R++ +++ NLDK+I L F G I + K+ + + ++ Y F Sbjct: 60 VVPANAITGGRETSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAF 119 Query: 686 VQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTE 865 V+Y Q A A+ LNG + + V + + Q+ S N++V +L+ + + Sbjct: 120 VEYHQSHDANIALQTLNGKQIENNIVKINWAFQSQQS----SSDDTFNLFVGDLNVNVDD 175 Query: 866 DNLKELFGNF-GPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYV 1042 + L+ F +F ++ ++ G SR +GFV+F + DDA +A++ + G+ + + L + Sbjct: 176 ETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRI 235 Query: 1043 GRAQKKSEREMQLKESFEKSNKETADRNQGTN 1138 A K+ +N RN G N Sbjct: 236 NWAAKRDN---------NNNNNYQQRRNYGNN 258 Score = 66.6 bits (161), Expect = 4e-10 Identities = 62/263 (23%), Positives = 117/263 (44%), Gaps = 6/263 (2%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L+VGDL+V+V D L + F S +S V D+ T S GY +V+F+S DA A++ + Sbjct: 164 LFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSM 223 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGN---ILSCK 643 +NG+P+RI ++ + R + N + + + +N+ + ++ N + Sbjct: 224 QGQDLNGRPLRINWA----AKRDNNNNNNYQQRRNYGNNNRGGFRQYNNNNNNNMNMGMN 279 Query: 644 VATEMS-GESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGS-- 814 + M+ S+G A ++ G + + + P V Q +++ S Sbjct: 280 MNMNMNMNNSRGMPPSSMGMPIGAMPLPSQ--GQPQQSQTIGLPPQVNPQAVDHIIRSAP 337 Query: 815 PKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHA 994 P+ Y+ N+ TE +L LF NFG ++ + K C F+ ++ + A Sbjct: 338 PRVTTAYIGNIPHFATEADLIPLFQNFG---FILDFKHYPEKGCC--FIKYDTHEQAAVC 392 Query: 995 VEDLNGKKFDDKELYVGRAQKKS 1063 + L F + L G +++S Sbjct: 393 IVALANFPFQGRNLRTGWGKERS 415
>Q08937:ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 291 Score = 81.6 bits (200), Expect = 1e-14 Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 30/209 (14%) Frame = +2 Query: 536 RKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFVQYEQDESA 712 R S +F+ NL S+D+ AL F GN+ +V + ++G S+G+GFV E Sbjct: 82 RFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEV 141 Query: 713 QNAINELNGMLLNDKKVYV--GPFVRKQERENVFGS------------------------ 814 + A + NG ++ + + V GP K+E + G Sbjct: 142 EAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGR 201 Query: 815 --PKFNNVYVKNLSESTTEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDA 985 N VYV NLS + LKELF G + +V D G+SR FGFV + + + Sbjct: 202 SVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEV 261 Query: 986 VHAVEDLNGKKFDDKELYVGRAQKKSERE 1072 A++ LNG D + + V A+++ R+ Sbjct: 262 NDAIDSLNGVDLDGRSIRVSAAEERPRRQ 290 Score = 73.2 bits (178), Expect = 5e-12 Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 21/230 (9%) Frame = +2 Query: 758 KVYVGPFVRKQERENVFGSPKFNN---VYVKNLSESTTEDNLKELFGNFGPITSVIVVRA 928 +V + F + ++ V P+F+ ++V NL S L LF G + V V+ Sbjct: 62 RVALSGFDQLEDDVEVAEQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYD 121 Query: 929 D-DGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSN 1105 G+SR FGFV ++ A + NG + D + + V ++RE N Sbjct: 122 KLTGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGN 181 Query: 1106 KETADRNQGTN----------------LYLKNLDGSVDDDEKLKELFAEFGTITSCKVMR 1237 G + +Y+ NL VDD LKELF+E G + KV+ Sbjct: 182 SSYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDD-LALKELFSEQGNVVDAKVVY 240 Query: 1238 D-SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERR 1384 D +G ++G GFV + SS++ A+ ++NG + + + V+ A+ + R+ Sbjct: 241 DRDSGRSRGFGFVTYSSSKEVNDAIDSLNGVDLDGRSIRVSAAEERPRRQ 290 Score = 52.4 bits (124), Expect = 8e-06 Identities = 26/79 (32%), Positives = 46/79 (58%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 +YVG+L V D L ++FS+ G+VV +V D ++ S G+ +V +SS + A++ L Sbjct: 209 VYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDSL 268 Query: 473 NFTPVNGKPIRIMYSNRDP 529 N ++G+ IR+ + P Sbjct: 269 NGVDLDGRSIRVSAAEERP 287
>O97018:SXL_CHRRU Sex-lethal homolog - Chrysomya rufifacies (Hairy maggot blowfly)| Length = 307 Score = 80.5 bits (197), Expect = 3e-14 Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 2/208 (0%) Frame = +2 Query: 392 VNTRMSLGYAYVNFSSPADAARALEMLNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKN 571 +N R G Y +FS A + M N P ++ N+ + Sbjct: 34 MNHRGGRGGGYNDFSGGGSAMGS--MCNMAPAISTNSVNSGGGDCGDNQGCNGTNLIVNY 91 Query: 572 LDKSIDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYEQDESAQNAINELNGMLL 748 L + + ++ LY F G I +C++ + +G S GY FV + + AQNAI LNG+ + Sbjct: 92 LPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKSLNGVTV 151 Query: 749 NDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRA 928 +K++ V + R S K N+YV NL + T+D L+++FG +G I ++R Sbjct: 152 RNKRLKVS-YARPGGE-----SIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRD 205 Query: 929 D-DGKSRCFGFVNFENPDDAVHAVEDLN 1009 GK R FV F ++A A+ LN Sbjct: 206 KLTGKPRGVAFVRFNKREEAQEAISALN 233 Score = 76.6 bits (187), Expect = 4e-13 Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 4/191 (2%) Frame = +2 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRA-DDGKSRCFGFVNFENPDDAVHAVED 1003 N+ V L + T+ L LF GPI + +++ G S + FV+F + DA +A++ Sbjct: 86 NLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKS 145 Query: 1004 LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEK 1183 LNG +K L V A+ E +K+ TNLY+ NL ++ DDE Sbjct: 146 LNGVTVRNKRLKVSYARPGGE---SIKD---------------TNLYVTNLPRTITDDE- 186 Query: 1184 LKELFAEFGTITSCKVMRDS-NGVNKGSGFVAFKSSEDATRALVAMNGKMV--GSKPLYV 1354 L+++F ++G I ++RD G +G FV F E+A A+ A+N + S+PL V Sbjct: 187 LEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISALNNVIPEGASQPLTV 246 Query: 1355 ALAQRKEERRA 1387 LA+ + +A Sbjct: 247 RLAEEHGKMKA 257 Score = 47.8 bits (112), Expect = 2e-04 Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 1/80 (1%) Frame = +2 Query: 1130 GTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATRA 1306 GTNL + L + D E L LF G I +C++M+D G + G FV F S DA A Sbjct: 84 GTNLIVNYLPQDMTDRE-LYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNA 142 Query: 1307 LVAMNGKMVGSKPLYVALAQ 1366 + ++NG V +K L V+ A+ Sbjct: 143 IKSLNGVTVRNKRLKVSYAR 162
>Q6FXP4:MRD1_CANGA Multiple RNA-binding domain-containing protein 1 - Candida glabrata| (Yeast) (Torulopsis glabrata) Length = 861 Score = 80.1 bits (196), Expect = 4e-14 Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 12/200 (6%) Frame = +2 Query: 554 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESK------GYGFVQYEQDESAQ 715 +IFIKNL+ ++ L D F F + +V T+ + K G+GFV++ E A Sbjct: 641 SIFIKNLNFKTTSQQLTDRFKVFSGFVVAQVKTKPDPKQKNKVLSMGFGFVEFRTKEQAT 700 Query: 716 NAINELNGMLLNDKKVYVGPFVRKQERENVFGSP-----KFNNVYVKNLSESTTEDNLKE 880 I+ ++G +++ K+ + + R+ GS K + VKNL T ++ E Sbjct: 701 AVISAMDGTVIDGHKIQL----KLSHRQGNAGSQEKKKAKNGKIIVKNLPFEATRKDVFE 756 Query: 881 LFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRA-QK 1057 LF +FG + SV V + D +R F FV F P +A +A++ L G + L + A Q+ Sbjct: 757 LFNSFGQLKSVRVPKKFDKSARGFAFVEFVLPKEAENAMDQLQGVHLLGRRLVMQPAEQE 816 Query: 1058 KSEREMQLKESFEKSNKETA 1117 + E +L+ +K K+ A Sbjct: 817 AANAEEELERMTKKVRKQAA 836 Score = 69.7 bits (169), Expect = 5e-11 Identities = 42/180 (23%), Positives = 91/180 (50%), Gaps = 10/180 (5%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVC-----RDVNTRMSLGYAYVNFSSPADAAR 457 +++ +L+ QL D F V +V + N +S+G+ +V F + A Sbjct: 642 IFIKNLNFKTTSQQLTDRFKVFSGFVVAQVKTKPDPKQKNKVLSMGFGFVEFRTKEQATA 701 Query: 458 ALEMLNFTPVNGKPIRIMYSNRDPSS-----RKSGAANIFIKNLDKSIDNKALYDTFSAF 622 + ++ T ++G I++ S+R ++ +K+ I +KNL K +++ F++F Sbjct: 702 VISAMDGTVIDGHKIQLKLSHRQGNAGSQEKKKAKNGKIIVKNLPFEATRKDVFELFNSF 761 Query: 623 GNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQEREN 802 G + S +V + ++G+ FV++ + A+NA+++L G+ L +++ + P +QE N Sbjct: 762 GQLKSVRVPKKFDKSARGFAFVEFVLPKEAENAMDQLQGVHLLGRRLVMQP--AEQEAAN 819 Score = 61.2 bits (147), Expect = 2e-08 Identities = 89/411 (21%), Positives = 159/411 (38%), Gaps = 51/411 (12%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++ ++ S + +FS G + V V D T S G+AYV F+ P +A +A L Sbjct: 327 LFLRNILYSSTEDDFKKLFSPYGELKEVHVAVDTRTGNSKGFAYVLFAKPEEAVQAYIEL 386 Query: 473 NFTPVNGKPIRIMYSN--RDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKV 646 + G+ + I+ ++ +D + N+ +K + + KA + N L Sbjct: 387 DKQIFQGRLLHILAADEMKDHRLDEFDLKNMPLKK-QRELKKKAAASKATFSWNSLYMNQ 445 Query: 647 ATEMSGESKGYGFVQYE--QDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPK 820 + + G + + E++ +A+ + + +V VRK K Sbjct: 446 DAVLGSVAAKLGVQKADLIDPENSNSAVKQALA------EAHVIGDVRKYFETKGVDLTK 499 Query: 821 FNN-----------VYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNF 967 F+N + VKN TT + L ELF FG + +++ A V F Sbjct: 500 FSNLKSPSQRDDRVILVKNFPFGTTREELGELFVPFGKLERLLMPPAGT-----IAIVQF 554 Query: 968 ENPDDAVHAVEDLNGKKFDDKELYVGRAQKK-----SEREMQLKESFEKSNKE------- 1111 + A L K+F +Y+ + K + E ++ EKS KE Sbjct: 555 RDIASGRSAFSKLAFKRFKGTVIYLEKGPKDCFTKAASNEDAMEHDEEKSAKEAGPSSAD 614 Query: 1112 ---------TADRNQG---------TNLYLKNLDGSVDDDEKLKELFAEFG--TITSCKV 1231 T D+ ++++KNL+ ++L + F F + K Sbjct: 615 LLESVSSKKTEDKEDEDEQVVDGPTVSIFIKNLNFKTTS-QQLTDRFKVFSGFVVAQVKT 673 Query: 1232 MRDSNGVNK----GSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRK 1372 D NK G GFV F++ E AT + AM+G ++ + + L+ R+ Sbjct: 674 KPDPKQKNKVLSMGFGFVEFRTKEQATAVISAMDGTVIDGHKIQLKLSHRQ 724 Score = 53.9 bits (128), Expect = 3e-06 Identities = 56/228 (24%), Positives = 94/228 (41%), Gaps = 18/228 (7%) Frame = +2 Query: 782 RKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGK------S 943 ++ E E V P + +++KNL+ TT L + F F V D K S Sbjct: 627 KEDEDEQVVDGPTVS-IFIKNLNFKTTSQQLTDRFKVFSGFVVAQVKTKPDPKQKNKVLS 685 Query: 944 RCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADR 1123 FGFV F + A + ++G D ++ QLK S + N + ++ Sbjct: 686 MGFGFVEFRTKEQATAVISAMDGTVIDGHKI-------------QLKLSHRQGNAGSQEK 732 Query: 1124 NQGTN--LYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDA 1297 + N + +KNL + ELF FG + S +V + + +G FV F ++A Sbjct: 733 KKAKNGKIIVKNLPFEATRKDVF-ELFNSFGQLKSVRVPKKFDKSARGFAFVEFVLPKEA 791 Query: 1298 TRAL-----VAMNGKMVGSKPLYVALAQRKEE-----RRARLQAQFSQ 1411 A+ V + G+ + +P A +EE ++ R QA S+ Sbjct: 792 ENAMDQLQGVHLLGRRLVMQPAEQEAANAEEELERMTKKVRKQAAVSE 839 Score = 49.3 bits (116), Expect = 7e-05 Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 25/148 (16%) Frame = +2 Query: 824 NNVYVKNLSESTTEDNLKELFGNF-----------GPITSVIVVRADDGKSRCFGFVNFE 970 + V VK L TE L++ F G IT + +++ +GKSR F F+ ++ Sbjct: 2 SRVIVKGLPIYLTEPELQKHFNKRLITTHATSNVDGLITDLRILKNREGKSRRFAFIGYK 61 Query: 971 NPDDAVHAVEDLNG-------------KKFDDKELYVGRAQKKSEREMQLKESFEKSNKE 1111 N DA+ AV +G K F D + +KK E +L+E EK +E Sbjct: 62 NEQDALDAVNYFDGSFIYTSKIEVDMAKSFADPRVPKSMKEKKREALKRLREKEEKLLEE 121 Query: 1112 TADRNQGTNLYLK-NLDGSVDDDEKLKE 1192 + + + K N+D ++ D++LKE Sbjct: 122 KNKKLKVQDTKSKINIDAEIEKDKQLKE 149
>P28644:ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplast - Spinacia oleracea (Spinach)| Length = 233 Score = 79.7 bits (195), Expect = 5e-14 Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 2/191 (1%) Frame = +2 Query: 815 PKFNNVYVKNLSESTTEDNLKELFGNFGPIT-SVIVVRADDGKSRCFGFVNFENPDDAVH 991 P+ ++V NL + L +F G + + ++ + +SR FGFV ++A Sbjct: 52 PEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEK 111 Query: 992 AVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVD 1171 AVE LNG D ++L V +A + E + FE S +Y+ NL V Sbjct: 112 AVELLNGYDMDGRQLTVNKAAPRGSPERAPRGDFEPS----------CRVYVGNLPWDV- 160 Query: 1172 DDEKLKELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPL 1348 D +L++LF+E G + S +V+ D G ++G GFV S + A+ A++G+ + + + Sbjct: 161 DTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAV 220 Query: 1349 YVALAQRKEER 1381 V +A+ + R Sbjct: 221 RVNVAEERPRR 231 Score = 74.7 bits (182), Expect = 2e-12 Identities = 45/166 (27%), Positives = 81/166 (48%), Gaps = 7/166 (4%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L+VG+L V +L +F G V V + T S G+ +V S+ +A +A+E+L Sbjct: 57 LFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELL 116 Query: 473 NFTPVNGKPIRIMYS------NRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNIL 634 N ++G+ + + + R P + +++ NL +D L FS G ++ Sbjct: 117 NGYDMDGRQLTVNKAAPRGSPERAPRGDFEPSCRVYVGNLPWDVDTSRLEQLFSEHGKVV 176 Query: 635 SCKVATEM-SGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYV 769 S +V ++ +G S+G+GFV + +AI L+G L+ + V V Sbjct: 177 SARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRV 222 Score = 49.3 bits (116), Expect = 7e-05 Identities = 26/79 (32%), Positives = 44/79 (55%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 +YVG+L V ++L +FS+ G VVS RV D T S G+ +V SS ++ A+ L Sbjct: 151 VYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAAL 210 Query: 473 NFTPVNGKPIRIMYSNRDP 529 + ++G+ +R+ + P Sbjct: 211 DGQTLDGRAVRVNVAEERP 229
>Q9P6M8:PABPX_SCHPO mRNA export factor crp79 - Schizosaccharomyces pombe (Fission yeast)| Length = 710 Score = 79.7 bits (195), Expect = 5e-14 Identities = 77/284 (27%), Positives = 117/284 (41%), Gaps = 2/284 (0%) Frame = +2 Query: 563 IKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGM 742 I NL + LY+ F G + V+ + YG V + ES QNAI +LN + Sbjct: 207 ILNLPAEVTPIDLYNHFKQAGVVKGTAVSQFLDQRGFRYGEVIMDSVESCQNAIEKLNNV 266 Query: 743 LLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVV 922 Y G + + S VK++ + T ++L T + + Sbjct: 267 ------PYKGSILEVSIKNKASSS-------VKSIPTTPTGESLWPFPSENANKTQINIE 313 Query: 923 RADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKS 1102 A K + + + G K + + E S Sbjct: 314 NATCSKMTWI--MGSPTKEKSQWGSVSTTGVSNQQNHPAAWNPDNKPQSIVHWDSLRESS 371 Query: 1103 NKETADRNQGTNLYLKNLDGSVDD-DEKLKELFAEFGTITSCKVMRDSN-GVNKGSGFVA 1276 +NLY+KNLD +V +L++LF+ FG+I S + N G++KG GFVA Sbjct: 372 PSIPNSPIDPSNLYVKNLDDTVITCKSQLEDLFSPFGSILSSMLACYPNSGISKGYGFVA 431 Query: 1277 FKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRARLQAQFS 1408 F+ E A RA +NG MVG K ++V A+RK +R RLQA F+ Sbjct: 432 FRQIEAAVRAKDTLNGMMVGKKRIFVCFAERKSDRIRRLQAFFA 475 Score = 69.7 bits (169), Expect = 5e-11 Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 12/209 (5%) Frame = +2 Query: 551 ANIFIKNLDKSIDN--KALYDTFSAFGNILSCKVAT-EMSGESKGYGFVQYEQDESAQNA 721 +N+++KNLD ++ L D FS FG+ILS +A SG SKGYGFV + Q E+A A Sbjct: 382 SNLYVKNLDDTVITCKSQLEDLFSPFGSILSSMLACYPNSGISKGYGFVAFRQIEAAVRA 441 Query: 722 INELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGP 901 + LNGM++ K+++V RK +R + N K SE T + + K LF Sbjct: 442 KDTLNGMMVGKKRIFVCFAERKSDRIRRLQAFFAN----KPTSEQTAQQDNKALFVKPER 497 Query: 902 ITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKE------LYVGRAQKKS 1063 ++V + + + + ENP VE+ N K + + YV Q+ Sbjct: 498 SSTVTIRKPIESSTNKIS----ENPTTLSSKVENKNEPKTGENKEPSQTNEYVNCKQENK 553 Query: 1064 EREMQLKESFE---KSNKETADRNQGTNL 1141 E QL + + ++ K + D QG L Sbjct: 554 ELSGQLSGNLDIKKEAGKLSHDGEQGNLL 582 Score = 43.5 bits (101), Expect = 0.004 Identities = 38/111 (34%), Positives = 54/111 (48%), Gaps = 7/111 (6%) Frame = +2 Query: 293 LYVGDLDVSVQD--AQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALE 466 LYV +LD +V +QL D+FS GS++S + N+ +S GY +V F A RA + Sbjct: 384 LYVKNLDDTVITCKSQLEDLFSPFGSILSSMLACYPNSGISKGYGFVAFRQIEAAVRAKD 443 Query: 467 MLNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKS-----IDNKALY 604 LN V K I + ++ R S + F N S DNKAL+ Sbjct: 444 TLNGMMVGKKRIFVCFAER--KSDRIRRLQAFFANKPTSEQTAQQDNKALF 492
>Q5BGA9:MRD1_EMENI Multiple RNA-binding domain-containing protein 1 - Emericella| nidulans (Aspergillus nidulans) Length = 819 Score = 79.7 bits (195), Expect = 5e-14 Identities = 93/398 (23%), Positives = 158/398 (39%), Gaps = 34/398 (8%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L+V +L ++++L VFS G + + V D S G+AYV ++ P A A L Sbjct: 297 LFVRNLSYETKESELEPVFSPFGKIEEIHVAFDTRFTTSKGFAYVQYADPDAAVEAYRNL 356 Query: 473 NFTPVNGKPIRIMYSNRDPSSR--KSGAANIFIKNLDKSIDNK--ALYDTFSAFGNILSC 640 + G+ + I+ +++ + + + + + +K K I K A TFS ++ Sbjct: 357 DGKIFQGRLLHILPASQKKTYKLDEHELSKLPLKK-QKQIKRKQEAASSTFSWNSLYMNA 415 Query: 641 KVATEMSGESKGYGFVQYEQDESAQNAINELNG--MLLNDKKVYVGPFVRKQERENVFGS 814 E G S+ A+ + + ++ + K Y F + F Sbjct: 416 DAVMSSVAERIGVSKADLLDPTSSDAAVKQAHAETHVIQETKAY---FKANGVNLDAFKQ 472 Query: 815 PKFNN--VYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAV 988 + N + VKN S T ++L++LF FG IT +++ S V F PD+A Sbjct: 473 RERGNLAILVKNFSYGTKTEDLRKLFEPFGQITRLLM-----PPSGTIAIVAFARPDEAQ 527 Query: 989 HAVEDLNGKKFDDKELYVGRA-----------QKKSEREMQLKESFEKSNKETADRNQ-- 1129 A + L +K D L++ +A Q + + F ++ AD Sbjct: 528 KAFKSLAYRKLGDSILFLEKAPKDLFEADVPPQNPLPETKAVSQGFSTADTFAADEGDEE 587 Query: 1130 ---GTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGS------GFVAFK 1282 L++KNL+ S ++ L E F S ++ + N G GF FK Sbjct: 588 VMATATLFIKNLNFST-TNQSLIEAFRPLDGFVSARIKTKPDPKNPGQTLSMGFGFADFK 646 Query: 1283 SSEDATRALVAMNGKMVGSKPLYVALAQR----KEERR 1384 + A AL MNG + L V + + EERR Sbjct: 647 TKAQAQAALAVMNGYTLDRHTLVVRASHKGMDAAEERR 684 Score = 70.1 bits (170), Expect = 4e-11 Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 14/205 (6%) Frame = +2 Query: 551 ANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGE------SKGYGFVQYEQDESA 712 A +FIKNL+ S N++L + F +S ++ T+ + S G+GF ++ A Sbjct: 592 ATLFIKNLNFSTTNQSLIEAFRPLDGFVSARIKTKPDPKNPGQTLSMGFGFADFKTKAQA 651 Query: 713 QNAINELNGMLLNDKKVYVGPFVR----KQERENVFGSPKF----NNVYVKNLSESTTED 868 Q A+ +NG L+ + V + +ER + K + +KNL T+ Sbjct: 652 QAALAVMNGYTLDRHTLVVRASHKGMDAAEERRKEDTAKKIAARRTKIIIKNLPFQATKK 711 Query: 869 NLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGR 1048 +++ LFG +G + SV V + D +R FGF +F + +A +A++ L + L + Sbjct: 712 DVRSLFGAYGQLRSVRVPKKFDRSARGFGFADFVSAREAENAMDALKNTHLLGRRLVLEF 771 Query: 1049 AQKKSEREMQLKESFEKSNKETADR 1123 A +++ + + EK E DR Sbjct: 772 ANEEAIDAEEEIQRIEKKVGEQLDR 796 Score = 48.5 bits (114), Expect = 1e-04 Identities = 61/284 (21%), Positives = 116/284 (40%), Gaps = 10/284 (3%) Frame = +2 Query: 548 AANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMS-GESKGYGFVQYEQDESAQNAI 724 +A +F++NL L FS FG I VA + SKG+ +VQY ++A A Sbjct: 294 SARLFVRNLSYETKESELEPVFSPFGKIEEIHVAFDTRFTTSKGFAYVQYADPDAAVEAY 353 Query: 725 NELNGMLLNDKKVYVGPFVRKQ----ERENVFGSPKFNNVYVKNLSESTTED-NLKELFG 889 L+G + + +++ P +K+ + + P +K E+ + + L+ Sbjct: 354 RNLDGKIFQGRLLHILPASQKKTYKLDEHELSKLPLKKQKQIKRKQEAASSTFSWNSLYM 413 Query: 890 NFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSER 1069 N + S + R K+ + +P + AV+ + E +V Sbjct: 414 NADAVMSSVAERIGVSKA------DLLDPTSSDAAVKQAHA------ETHV--------- 452 Query: 1070 EMQLKESFEKSNKETAD----RNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMR 1237 +Q +++ K+N D R +G L E L++LF FG IT +++ Sbjct: 453 -IQETKAYFKANGVNLDAFKQRERGNLAILVKNFSYGTKTEDLRKLFEPFGQIT--RLLM 509 Query: 1238 DSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQR 1369 +G VAF ++A +A ++ + +G L++ A + Sbjct: 510 PPSGT---IAIVAFARPDEAQKAFKSLAYRKLGDSILFLEKAPK 550
>Q75A83:MRD1_ASHGO Multiple RNA-binding domain-containing protein 1 - Ashbya gossypii| (Yeast) (Eremothecium gossypii) Length = 838 Score = 79.7 bits (195), Expect = 5e-14 Identities = 64/244 (26%), Positives = 115/244 (47%), Gaps = 21/244 (8%) Frame = +2 Query: 518 NRDPSSRKSG----AANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGE------ 667 ++ PSS + +IF+KNL+ S + L + F F + +V T+ + Sbjct: 597 SKTPSSEATAIDGPTVSIFVKNLNFSTTSAQLAEKFKPFSGFVVAQVKTKPDPKNSDKKL 656 Query: 668 SKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVG--------PFVRKQERENVFGSPKF 823 S G+GF+++ E A I ++G +++ K+ + P K ++ + G Sbjct: 657 SMGFGFIEFRTKEQAGAVIAAMDGAVIDGHKIQLKISHKQSSLPKTSKGSKKKISGK--- 713 Query: 824 NNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVED 1003 + VKNL T ++ ELF +FG + SV V + D +R F FV F P +A +A++ Sbjct: 714 --IIVKNLPFEATRKDVFELFSSFGQLKSVRVPKKFDKSARGFAFVEFLLPSEAENAMDQ 771 Query: 1004 LNGKKFDDKELYVGRAQKKSER-EMQLKESFEKSNKETADRNQGT--NLYLKNLDGSVDD 1174 L G + L + A+++S+ E Q+ + K K+ A G N + +D S D+ Sbjct: 772 LQGVHLLGRRLVMQYAEQESDDVEEQISKMTMKMKKQAAVSKMGALRNSGKRKIDMSDDE 831 Query: 1175 DEKL 1186 ++ L Sbjct: 832 NDGL 835 Score = 69.3 bits (168), Expect = 7e-11 Identities = 39/169 (23%), Positives = 87/169 (51%), Gaps = 12/169 (7%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVC-----RDVNTRMSLGYAYVNFSSPADAAR 457 ++V +L+ S AQL + F V +V ++ + ++S+G+ ++ F + A Sbjct: 614 IFVKNLNFSTTSAQLAEKFKPFSGFVVAQVKTKPDPKNSDKKLSMGFGFIEFRTKEQAGA 673 Query: 458 ALEMLNFTPVNGKPIRIMYSNRDPS-------SRKSGAANIFIKNLDKSIDNKALYDTFS 616 + ++ ++G I++ S++ S S+K + I +KNL K +++ FS Sbjct: 674 VIAAMDGAVIDGHKIQLKISHKQSSLPKTSKGSKKKISGKIIVKNLPFEATRKDVFELFS 733 Query: 617 AFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKV 763 +FG + S +V + ++G+ FV++ A+NA+++L G+ L +++ Sbjct: 734 SFGQLKSVRVPKKFDKSARGFAFVEFLLPSEAENAMDQLQGVHLLGRRL 782 Score = 63.5 bits (153), Expect = 4e-09 Identities = 85/403 (21%), Positives = 154/403 (38%), Gaps = 43/403 (10%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++ ++ + +FS G + V V D T S G+AYV F P AA A L Sbjct: 303 LFLRNILYDATEEDFKQLFSPYGELEEVHVAVDTRTGQSKGFAYVLFKDPEHAANAYIEL 362 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNL----DKSIDNKAL--YDTFSAFGNIL 634 + G+ + I+ ++ + R +KNL + + KA TFS + Sbjct: 363 DKQIFQGRLLHILPADAKKTHRLD---EFDLKNLPLKKQRELKRKATAAQQTFSWNSLFM 419 Query: 635 SCKVATEMSGESKGYGFVQYEQDESAQNAINEL--NGMLLNDKKVYV---GPFVRKQERE 799 + G Q E++ +A+ + ++ D + Y G + + E+ Sbjct: 420 NQDAVLSSVAAKLGMEKSQLIDPENSGSAVKQALAEAHVIGDVRKYFEARGVDLTQFEKF 479 Query: 800 NVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPD 979 + VKN TT + L ELF FG I +++ S + + + Sbjct: 480 KKVTERDDRIILVKNFPHGTTREELAELFLPFGKIERMLM-----PPSGTIAIIQYRDVP 534 Query: 980 DAVHAVEDLNGKKFDDKELYVGRAQ--------------------------KKSEREMQL 1081 A A L+ K+F LY+ + KKS ++ Sbjct: 535 AARGAFTKLSYKRFKAPILYLEKGPKDCFSREPRGDELLEGDAAPEDVKEIKKSVEDVMD 594 Query: 1082 KESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFG--TITSCKVMRDSNGVN 1255 +S S++ TA ++++KNL+ S +L E F F + K D + Sbjct: 595 ADSKTPSSEATAIDGPTVSIFVKNLNFST-TSAQLAEKFKPFSGFVVAQVKTKPDPKNSD 653 Query: 1256 K----GSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRK 1372 K G GF+ F++ E A + AM+G ++ + + ++ ++ Sbjct: 654 KKLSMGFGFIEFRTKEQAGAVIAAMDGAVIDGHKIQLKISHKQ 696 Score = 53.9 bits (128), Expect = 3e-06 Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 6/190 (3%) Frame = +2 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGK------SRCFGFVNFENPDDAV 988 +++VKNL+ STT L E F F V D K S FGF+ F + A Sbjct: 613 SIFVKNLNFSTTSAQLAEKFKPFSGFVVAQVKTKPDPKNSDKKLSMGFGFIEFRTKEQAG 672 Query: 989 HAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSV 1168 + ++G D ++ + + K+S S K++K + + G + +KNL Sbjct: 673 AVIAAMDGAVIDGHKIQLKISHKQS--------SLPKTSKGSKKKISG-KIIVKNLPFEA 723 Query: 1169 DDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPL 1348 + ELF+ FG + S +V + + +G FV F +A A+ + G + + L Sbjct: 724 TRKDVF-ELFSSFGQLKSVRVPKKFDKSARGFAFVEFLLPSEAENAMDQLQGVHLLGRRL 782 Query: 1349 YVALAQRKEE 1378 + A+++ + Sbjct: 783 VMQYAEQESD 792 Score = 45.1 bits (105), Expect = 0.001 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 10/112 (8%) Frame = +2 Query: 887 GNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQK--- 1057 G+ IT V +V+ G SR F F+ + + DA A+E NG D + V A+ Sbjct: 32 GSEDQITDVKIVKDKSGNSRRFAFIGYRSEQDAFDAIEYFNGSFIDTARIEVAMAKSFAD 91 Query: 1058 -------KSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKE 1192 + +R LK E+ ++ A++ Q +D + +++L+E Sbjct: 92 PRVPTPMREKRREALKRLREREDRILAEKRQKQTKPQHGIDAEISKNKQLQE 143 Score = 36.6 bits (83), Expect = 0.48 Identities = 15/51 (29%), Positives = 31/51 (60%) Frame = +2 Query: 1214 ITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQ 1366 IT K+++D +G ++ F+ ++S +DA A+ NG + + + VA+A+ Sbjct: 37 ITDVKIVKDKSGNSRRFAFIGYRSEQDAFDAIEYFNGSFIDTARIEVAMAK 87
>P41891:GAR2_SCHPO Protein gar2 - Schizosaccharomyces pombe (Fission yeast)| Length = 500 Score = 79.7 bits (195), Expect = 5e-14 Identities = 56/175 (32%), Positives = 88/175 (50%), Gaps = 13/175 (7%) Frame = +2 Query: 527 PSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFVQYEQD 703 PS + +F+ L ++D++ L F +G I+ +V + SG SKGYG+V +E Sbjct: 255 PSQDSNETCTVFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETP 314 Query: 704 ESAQNAI-----NELNGMLLN---DKKVYVGPFVRKQERENVFG---SPKFNNVYVKNLS 850 E+A+ A+ E++G ++N P Q+R FG S + V+V NLS Sbjct: 315 EAAKAAVAANGTKEIDGRMVNLDLSNPRPANPQPYAQQRAGNFGDQLSEPSDTVFVGNLS 374 Query: 851 ESTTEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHAVEDLNG 1012 + TED+L FG G I S+ + G+ + FG+V F + D A VE +NG Sbjct: 375 FNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKKCVE-MNG 428 Score = 68.2 bits (165), Expect = 1e-10 Identities = 46/165 (27%), Positives = 81/165 (49%), Gaps = 16/165 (9%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 ++VG L +V D L F + G++V RV D + S GY YV+F +P A A+ Sbjct: 265 VFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAKAAVAAN 324 Query: 473 NFTPVNGKPIRIMYSNRDPSS------RKSG---------AANIFIKNLDKSIDNKALYD 607 ++G+ + + SN P++ +++G + +F+ NL + L Sbjct: 325 GTKEIDGRMVNLDLSNPRPANPQPYAQQRAGNFGDQLSEPSDTVFVGNLSFNATEDDLST 384 Query: 608 TFSAFGNILSCKVATE-MSGESKGYGFVQYEQDESAQNAINELNG 739 F G+I S ++ T+ SG KG+G+V + +SA+ + E+NG Sbjct: 385 AFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKKCV-EMNG 428 Score = 58.2 bits (139), Expect = 2e-07 Identities = 59/242 (24%), Positives = 105/242 (43%), Gaps = 9/242 (3%) Frame = +2 Query: 647 ATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFN 826 ++E S +S+ E +S ++ +E ++KK P ++ + S N Sbjct: 201 SSESSSDSESSSDSSSESGDSDSSSDSESESSSEDEKKRKAEPASEERPAKITKPSQDSN 260 Query: 827 N---VYVKNLSESTTEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHA 994 V+V LS + + L + F +G I +++ G+S+ +G+V+FE P+ A A Sbjct: 261 ETCTVFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAKAA 320 Query: 995 VEDLNGKKFDDK----ELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDG 1162 V K+ D + +L R Q +F E +D +++ NL Sbjct: 321 VAANGTKEIDGRMVNLDLSNPRPANPQPYAQQRAGNFGDQLSEPSD-----TVFVGNLSF 375 Query: 1163 SVDDDEKLKELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGS 1339 + +D+ L F G I S ++ D +G KG G+V F S D+ + V MNG + Sbjct: 376 NATEDD-LSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTF-SDIDSAKKCVEMNGHFIAG 433 Query: 1340 KP 1345 +P Sbjct: 434 RP 435
>O61374:SXL_CERCA Sex-lethal homolog - Ceratitis capitata (Mediterranean fruit fly)| Length = 348 Score = 79.3 bits (194), Expect = 6e-14 Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 2/165 (1%) Frame = +2 Query: 521 RDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYE 697 RD S N+ + L + + ++ LY F G I +C++ + +G S GY FV + Sbjct: 100 RDGHGGGSNGTNLIVNYLPQDMTDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFA 159 Query: 698 QDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLK 877 + +Q AI LNG+ + +K++ V + R S K N+YV NL + T+D L Sbjct: 160 AETDSQRAIKSLNGITVRNKRLKVS-YARPGGE-----SIKDTNLYVTNLPRTITDDQLD 213 Query: 878 ELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVHAVEDLN 1009 +FG +G I ++R GK R FV F ++A A+ LN Sbjct: 214 TIFGKYGMIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISALN 258 Score = 76.3 bits (186), Expect = 5e-13 Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 4/210 (1%) Frame = +2 Query: 794 RENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRA-DDGKSRCFGFVNFE 970 R+ G N+ V L + T+ L LF GPI + ++R G S + FV+F Sbjct: 100 RDGHGGGSNGTNLIVNYLPQDMTDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFA 159 Query: 971 NPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLK 1150 D+ A++ LNG +K L V A+ E +K+ TNLY+ Sbjct: 160 AETDSQRAIKSLNGITVRNKRLKVSYARPGGE---SIKD---------------TNLYVT 201 Query: 1151 NLDGSVDDDEKLKELFAEFGTITSCKVMRDS-NGVNKGSGFVAFKSSEDATRALVAMNGK 1327 NL ++ DD+ L +F ++G I ++RD G +G FV F E+A A+ A+N Sbjct: 202 NLPRTITDDQ-LDTIFGKYGMIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISALNNV 260 Query: 1328 MV--GSKPLYVALAQRKEERRARLQAQFSQ 1411 + S+PL V LA+ E +A+ Q SQ Sbjct: 261 IPEGASQPLTVRLAE--EHGKAKAQHYMSQ 288
>P19683:ROC4_NICSY 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 315 Score = 79.0 bits (193), Expect = 8e-14 Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 2/200 (1%) Frame = +2 Query: 788 QERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPIT-SVIVVRADDGKSRCFGFVN 964 +E E P+ ++V NL + L LF G + + ++ D +SR FGFV Sbjct: 124 EEEEEFQEPPEDAKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVT 183 Query: 965 FENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLY 1144 ++A AVE N + + L V +A ++ ER + +FE+S + +Y Sbjct: 184 MSTVEEAEKAVEMYNRYDVNGRLLTVNKAARRGERPERPPRTFEQSYR----------IY 233 Query: 1145 LKNLDGSVDDDEKLKELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATRALVAMN 1321 + N+ + DD +L++LF+E G + S +V+ D G ++G GFV S + + A+ ++ Sbjct: 234 VGNIPWGI-DDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLD 292 Query: 1322 GKMVGSKPLYVALAQRKEER 1381 G+ + + + V +A+ + R Sbjct: 293 GQSLDGRTIRVNVAEDRSRR 312 Score = 68.2 bits (165), Expect = 1e-10 Identities = 47/177 (26%), Positives = 84/177 (47%), Gaps = 4/177 (2%) Frame = +2 Query: 551 ANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYEQDESAQNAIN 727 A +F+ NL +D++ L F G + +V + +S+G+GFV E A+ A+ Sbjct: 136 AKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVE 195 Query: 728 ELNGMLLNDKKVYVGPFVRKQEREN--VFGSPKFNNVYVKNLSESTTEDNLKELFGNFGP 901 N +N + + V R+ ER + +YV N+ + L++LF G Sbjct: 196 MYNRYDVNGRLLTVNKAARRGERPERPPRTFEQSYRIYVGNIPWGIDDARLEQLFSEHGK 255 Query: 902 ITSV-IVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSER 1069 + S +V + G+SR FGFV + + A+ +L+G+ D + + V A+ +S R Sbjct: 256 VVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLDGQSLDGRTIRVNVAEDRSRR 312 Score = 51.6 bits (122), Expect = 1e-05 Identities = 26/72 (36%), Positives = 44/72 (61%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 +YVG++ + DA+L +FS+ G VVS RV D T S G+ +V +S A+ + A+ L Sbjct: 232 IYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANL 291 Query: 473 NFTPVNGKPIRI 508 + ++G+ IR+ Sbjct: 292 DGQSLDGRTIRV 303
>Q6CEW9:MRD1_YARLI Multiple RNA-binding domain-containing protein 1 - Yarrowia| lipolytica (Candida lipolytica) Length = 828 Score = 79.0 bits (193), Expect = 8e-14 Identities = 53/215 (24%), Positives = 106/215 (49%), Gaps = 8/215 (3%) Frame = +2 Query: 506 IMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKG--- 676 +M + + + + ++F+KNL+ ++ L D F A L +V + ++KG Sbjct: 590 VMDTGSNDERPATASTSVFVKNLNFKTTSRVLTDAFKALDGFLVAQVKMKPDSKNKGKFL 649 Query: 677 ---YGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNN-VYVKN 844 +GFV++ E+A+ A ++G +L+ K+ + R Q+ E ++ + +KN Sbjct: 650 SMGFGFVEFSSKEAAEIAQKAMDGHVLDGHKLQLKISNRGQDEETTETKKAIDSKILIKN 709 Query: 845 LSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFD 1024 L T+ ++++LFG FG + +V V + + +SR F F + + +A HA+ L G Sbjct: 710 LPFEATKKDVQKLFGAFGSLKTVRVPKKFNSESRGFAFAEYVSAKEAEHAMSALQGTHLL 769 Query: 1025 DKELYVGRAQ-KKSEREMQLKESFEKSNKETADRN 1126 + L + AQ S E +++ +K+ A R+ Sbjct: 770 GRRLVLQYAQADASNAEEEIERMQATVSKQAAQRS 804 Score = 62.0 bits (149), Expect = 1e-08 Identities = 42/167 (25%), Positives = 84/167 (50%), Gaps = 10/167 (5%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGS--VVSVRVCRDVNTR---MSLGYAYVNFSSPADAAR 457 ++V +L+ L D F + V V++ D + +S+G+ +V FSS A Sbjct: 607 VFVKNLNFKTTSRVLTDAFKALDGFLVAQVKMKPDSKNKGKFLSMGFGFVEFSSKEAAEI 666 Query: 458 ALEMLNFTPVNGKPIRIMYSNRDPS-----SRKSGAANIFIKNLDKSIDNKALYDTFSAF 622 A + ++ ++G +++ SNR ++K+ + I IKNL K + F AF Sbjct: 667 AQKAMDGHVLDGHKLQLKISNRGQDEETTETKKAIDSKILIKNLPFEATKKDVQKLFGAF 726 Query: 623 GNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKV 763 G++ + +V + + ES+G+ F +Y + A++A++ L G L +++ Sbjct: 727 GSLKTVRVPKKFNSESRGFAFAEYVSAKEAEHAMSALQGTHLLGRRL 773 Score = 57.4 bits (137), Expect = 3e-07 Identities = 85/408 (20%), Positives = 154/408 (37%), Gaps = 46/408 (11%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++ +L + ++ +FSQ G + V + + T G+A+V F P +A A E Sbjct: 303 LFLRNLLYTAKEEDFRQLFSQYGELEEVHLPINTKTGQCKGFAHVQFEDPENAIAAYEAQ 362 Query: 473 NFTPVNGKPIRIM-------YSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNI 631 + G+ + I+ Y+ D K N+ +K + + KA N Sbjct: 363 DGKIFQGRLLHILPGKPKKDYNRLDEHDLK----NLPLKK-QQELKRKAEAAKQQFSWNS 417 Query: 632 LSCKVATEMSGESKGYGFVQYE--QDESAQNAINE--LNGMLLNDKKVY-------VGPF 778 L M +K G + E +S+ A+ + ++ D K Y + F Sbjct: 418 LYMNQDAVMESVAKSMGIKKSELIDPDSSDAAVKQALAEATVIGDVKSYFEKMGVDLASF 477 Query: 779 VRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGF 958 K + V + VKN TT+ + E+F +G + V++ A Sbjct: 478 DNKDRDDRV--------ILVKNFPFGTTQPEIAEMFSEYGDLYKVMMPPAG-----TIAI 524 Query: 959 VNFENPDDAVHAVEDLNGKKFDDKELYVGRAQK----------------KSEREMQLKES 1090 V F++ DA A L ++F LY+ + K K ++ + +++ Sbjct: 525 VIFKHIPDARAAFAKLAFRRFKTSILYLEKGPKNLLPNEKMESDEVEHVKQDKIVTIEDK 584 Query: 1091 FEKSNKETADRNQ------GTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGV 1252 S+ N T++++KNL+ L + F +V + Sbjct: 585 LSASDVMDTGSNDERPATASTSVFVKNLNFKT-TSRVLTDAFKALDGFLVAQVKMKPDSK 643 Query: 1253 NKGS------GFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEE 1378 NKG GFV F S E A A AM+G ++ L + ++ R ++ Sbjct: 644 NKGKFLSMGFGFVEFSSKEAAEIAQKAMDGHVLDGHKLQLKISNRGQD 691 Score = 48.5 bits (114), Expect = 1e-04 Identities = 30/114 (26%), Positives = 58/114 (50%), Gaps = 10/114 (8%) Frame = +2 Query: 818 KFNNVYVKNLSESTTEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHA 994 K ++++NL + E++ ++LF +G + V + + G+ + F V FE+P++A+ A Sbjct: 299 KTGRLFLRNLLYTAKEEDFRQLFSQYGELEEVHLPINTKTGQCKGFAHVQFEDPENAIAA 358 Query: 995 VEDLNGKKFDDKELYV--GRAQKKSER-------EMQLKESFEKSNKETADRNQ 1129 E +GK F + L++ G+ +K R + LK+ E K A + Q Sbjct: 359 YEAQDGKIFQGRLLHILPGKPKKDYNRLDEHDLKNLPLKKQQELKRKAEAAKQQ 412 Score = 41.6 bits (96), Expect = 0.015 Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 10/110 (9%) Frame = +2 Query: 824 NNVYVKNLSESTTEDNLKELFGN--------FGP--ITSVIVVRADDGKSRCFGFVNFEN 973 + + VKNL E LK+ F F P IT V VVRA DGK+R FGFV F + Sbjct: 2 SRLIVKNLPPYLDEAGLKKHFSTVKDPKSAGFAPSDITDVKVVRARDGKTRRFGFVGFRS 61 Query: 974 PDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADR 1123 + A AV+ + + ++ V A ++ + L S + ++ A R Sbjct: 62 DETAEAAVKYFDTSFINSTKISVAVAMTFTDPNVPL--SSRERKRQAAQR 109 Score = 37.4 bits (85), Expect = 0.28 Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 10/83 (12%) Frame = +2 Query: 551 ANIFIKNLDKSIDNKALYDTFS----------AFGNILSCKVATEMSGESKGYGFVQYEQ 700 + + +KNL +D L FS A +I KV G+++ +GFV + Sbjct: 2 SRLIVKNLPPYLDEAGLKKHFSTVKDPKSAGFAPSDITDVKVVRARDGKTRRFGFVGFRS 61 Query: 701 DESAQNAINELNGMLLNDKKVYV 769 DE+A+ A+ + +N K+ V Sbjct: 62 DETAEAAVKYFDTSFINSTKISV 84 Score = 33.5 bits (75), Expect = 4.0 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = +2 Query: 1214 ITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALA 1363 IT KV+R +G + GFV F+S E A A+ + + S + VA+A Sbjct: 38 ITDVKVVRARDGKTRRFGFVGFRSDETAEAAVKYFDTSFINSTKISVAVA 87
>Q5AJS6:MRD1_CANAL Multiple RNA-binding domain-containing protein 1 - Candida albicans| (Yeast) Length = 841 Score = 78.6 bits (192), Expect = 1e-13 Identities = 61/201 (30%), Positives = 100/201 (49%), Gaps = 11/201 (5%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEM----SGE--SKGYGFVQYEQDESAQN 718 +F+KNL+ + +AL D F + V T+ SG+ S G+GFV++ E A Sbjct: 619 VFVKNLNFATTVQALSDLFKPLPGFVVATVKTKPDPKNSGKTLSMGFGFVEFRTKEQANV 678 Query: 719 AINELNGMLLNDKKVYVGPFVRKQ----ERENVFGSPKFNNVYVKNLSESTTEDNLKELF 886 AI+ L+G +L+ K+ + KQ ++ S K + + +KNL T +L ELF Sbjct: 679 AISTLDGHVLDGHKLQL-KLSHKQGTGTSASSIKKSGKSSKIIIKNLPFEATRKDLLELF 737 Query: 887 GNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSE 1066 G FG + SV V + D +R F FV F +A A+ L G + L + A++ E Sbjct: 738 GAFGQLKSVRVPKKFDQSARGFAFVEFNLMKEAETAMSQLEGVHLLGRRLVMQYAEQDPE 797 Query: 1067 R-EMQLKESFEKSNKETADRN 1126 E++++ +K K+ A +N Sbjct: 798 NAEVEIERMTKKVKKQVATQN 818 Score = 62.8 bits (151), Expect = 6e-09 Identities = 83/407 (20%), Positives = 155/407 (38%), Gaps = 47/407 (11%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++ ++ + +FSQ G++ V + D T S G+ YV F DA RA L Sbjct: 312 LFIRNISYEASEEDFRSLFSQYGALEEVHIAIDTRTGKSKGFLYVQFLKKEDATRAYRSL 371 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNL----DKSIDNKA--LYDTFSAFGNIL 634 + G+ + I+ +++ R +KNL + + KA FS + Sbjct: 372 DKQIFQGRLLHILPADKKKDHRLD---EFDLKNLPLKKQRELKKKAQAAKTQFSWNSLYM 428 Query: 635 SCKVATEMSGESKGYGFVQYEQDESAQNAINELNG---------MLLNDKKVYVGPFVRK 787 + E G Q E++ +A+ + D+ V + F +K Sbjct: 429 NSDAVLESVASKLGVTKSQLIDPENSSSAVKQALAEAHVIGDVRKYFEDRGVDLTSFDKK 488 Query: 788 QERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNF 967 + + + + VKN TT D + ELF +G + +++ A + F Sbjct: 489 ERDDKI--------ILVKNFPFGTTIDEIGELFSAYGQLKRMLMPPAG-----TIAIIEF 535 Query: 968 ENPDDAVHAVEDLNGKKFDDKELYVGRA-------------------QKKSEREMQLKES 1090 + A A L K+F LY+ + Q+++E ++ K S Sbjct: 536 RDAPSARAAFSKLAYKRFKSSILYLEKGPKDLFTREPTTNEVATIPEQQQNEHAVEAKIS 595 Query: 1091 F-----EKSNKETADRNQGTN--LYLKNLDGSVDDDEKLKELFAEFG--TITSCKVMRDS 1243 E + + QG +++KNL+ + + L +LF + + K D Sbjct: 596 ANEILGESKEDDEIESVQGPTVAVFVKNLNFAT-TVQALSDLFKPLPGFVVATVKTKPDP 654 Query: 1244 NGVNK----GSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRK 1372 K G GFV F++ E A A+ ++G ++ L + L+ ++ Sbjct: 655 KNSGKTLSMGFGFVEFRTKEQANVAISTLDGHVLDGHKLQLKLSHKQ 701 Score = 59.3 bits (142), Expect = 7e-08 Identities = 41/169 (24%), Positives = 85/169 (50%), Gaps = 12/169 (7%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVC-----RDVNTRMSLGYAYVNFSSPADAAR 457 ++V +L+ + L D+F + V V ++ +S+G+ +V F + A Sbjct: 619 VFVKNLNFATTVQALSDLFKPLPGFVVATVKTKPDPKNSGKTLSMGFGFVEFRTKEQANV 678 Query: 458 ALEMLNFTPVNGKPIRIMYSNRD------PSSRKSG-AANIFIKNLDKSIDNKALYDTFS 616 A+ L+ ++G +++ S++ S +KSG ++ I IKNL K L + F Sbjct: 679 AISTLDGHVLDGHKLQLKLSHKQGTGTSASSIKKSGKSSKIIIKNLPFEATRKDLLELFG 738 Query: 617 AFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKV 763 AFG + S +V + ++G+ FV++ + A+ A+++L G+ L +++ Sbjct: 739 AFGQLKSVRVPKKFDQSARGFAFVEFNLMKEAETAMSQLEGVHLLGRRL 787 Score = 51.2 bits (121), Expect = 2e-05 Identities = 34/138 (24%), Positives = 63/138 (45%), Gaps = 15/138 (10%) Frame = +2 Query: 824 NNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVED 1003 + + VK L + TE+ L+E F G +T V +++ +G+SR F F+ +++ D A AV+ Sbjct: 2 SRLIVKGLPKYYTEEKLREFFSKQGDVTDVKLMKKRNGESRKFAFIGYKSADAAERAVKY 61 Query: 1004 LN-------------GKKFDDKELYVGRAQKKSEREMQLKESFEK--SNKETADRNQGTN 1138 N K F D + + +K+ E +LK+ E+ + A + Sbjct: 62 FNKSFIDTARIEVEFAKTFSDPTVPLSFKEKRKREEQKLKDEQERLLEQELRAQAKKQKT 121 Query: 1139 LYLKNLDGSVDDDEKLKE 1192 +D + + KL+E Sbjct: 122 KSTSEIDDEIASNPKLRE 139 Score = 44.7 bits (104), Expect = 0.002 Identities = 27/112 (24%), Positives = 59/112 (52%), Gaps = 1/112 (0%) Frame = +2 Query: 1052 QKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKV 1231 Q +E E+ +E + +ET L+++N+ +++ + LF+++G + + Sbjct: 289 QSDNEPELTPEEQIAQKIEETG------RLFIRNISYEASEED-FRSLFSQYGALEEVHI 341 Query: 1232 MRDSN-GVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERR 1384 D+ G +KG +V F EDATRA +++ ++ + L++ A +K++ R Sbjct: 342 AIDTRTGKSKGFLYVQFLKKEDATRAYRSLDKQIFQGRLLHILPADKKKDHR 393 Score = 44.3 bits (103), Expect = 0.002 Identities = 20/64 (31%), Positives = 38/64 (59%) Frame = +2 Query: 1175 DEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYV 1354 +EKL+E F++ G +T K+M+ NG ++ F+ +KS++ A RA+ N + + + V Sbjct: 15 EEKLREFFSKQGDVTDVKLMKKRNGESRKFAFIGYKSADAAERAVKYFNKSFIDTARIEV 74 Query: 1355 ALAQ 1366 A+ Sbjct: 75 EFAK 78 Score = 35.8 bits (81), Expect = 0.81 Identities = 23/109 (21%), Positives = 51/109 (46%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 + + +L L ++F G + SVRV + + + + G+A+V F+ +A A+ L Sbjct: 719 IIIKNLPFEATRKDLLELFGAFGQLKSVRVPKKFD-QSARGFAFVEFNLMKEAETAMSQL 777 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSA 619 + G+ + + Y+ +DP + A + I+ + K + + +A Sbjct: 778 EGVHLLGRRLVMQYAEQDPEN-----AEVEIERMTKKVKKQVATQNLAA 821
>Q4WJT7:MRD1_ASPFU Multiple RNA-binding domain-containing protein 1 - Aspergillus| fumigatus (Sartorya fumigata) Length = 825 Score = 78.6 bits (192), Expect = 1e-13 Identities = 92/397 (23%), Positives = 161/397 (40%), Gaps = 33/397 (8%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L+V +L ++ L VFS+ G + + V D + S G+AYV + P A +A + L Sbjct: 303 LFVRNLPYDASESDLEPVFSKFGKIEEIHVAFDTRSTTSKGFAYVQYIEPDAAVQAYKEL 362 Query: 473 NFTPVNGKPIRIMYSNRDPSSR--KSGAANIFIKNLDKSIDNK--ALYDTFSAFGNILSC 640 + G+ + I+ + + + + + + +K K I K A TFS ++ Sbjct: 363 DGKHFQGRLMHILPATAKKTYKIDEHELSKLPLKK-QKQIKRKLEASSSTFSWNSLYMNT 421 Query: 641 KVATEMSGESKGYGFVQYEQDESAQNAINELNG--MLLNDKKVYVGPFVRKQERENVFGS 814 E G SA A+ + + ++ + K Y F + F Sbjct: 422 DAVMSSVAERLGVSKADLLDPTSADAAVKQAHAETHVIQETKAY---FTANGVNLDAFKQ 478 Query: 815 PKFNN--VYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAV 988 + N + VKN S D+L++LF +G IT +++ S V F PD+A Sbjct: 479 RERGNTAILVKNFSYGVKVDDLRKLFEPYGQITRLLM-----PPSGTIAIVEFARPDEAQ 533 Query: 989 HAVEDLNGKKFDDKELYVGRA-----------QKKSEREMQLKESFEKSNKETADRNQ-- 1129 A + L +K D L++ +A Q + + F ++ A+ Sbjct: 534 KAFKGLAYRKVGDSILFLEKAPANLFDATTAPQTSVLETKAVSQGFSTADTFAAEDGDEP 593 Query: 1130 --GTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKV------MRDSNGVNKGSGFVAFKS 1285 + L++KNL+ S +E+ E+F S ++ R ++ G GFV F++ Sbjct: 594 VVTSTLFVKNLNFST-TNERFTEVFKPLDGFVSARIKTKPDPKRPGKTLSMGFGFVDFRT 652 Query: 1286 SEDATRALVAMNGKMVGSKPLYVALAQR----KEERR 1384 A AL AM+G + L V + + EERR Sbjct: 653 KAQAQAALAAMDGYKLDQHELVVRASNKAMDAAEERR 689 Score = 70.9 bits (172), Expect = 2e-11 Identities = 59/248 (23%), Positives = 110/248 (44%), Gaps = 19/248 (7%) Frame = +2 Query: 437 SPADAARALEMLNFTPVNGKPIRIMYSNRDPSSRKSG-----AANIFIKNLDKSIDNKAL 601 +PA+ A + + K + +S D + + G + +F+KNL+ S N+ Sbjct: 554 APANLFDATTAPQTSVLETKAVSQGFSTADTFAAEDGDEPVVTSTLFVKNLNFSTTNERF 613 Query: 602 YDTFSAFGNILSCKVATEMSGE------SKGYGFVQYEQDESAQNAINELNGMLLNDKKV 763 + F +S ++ T+ + S G+GFV + AQ A+ ++G L+ ++ Sbjct: 614 TEVFKPLDGFVSARIKTKPDPKRPGKTLSMGFGFVDFRTKAQAQAALAAMDGYKLDQHEL 673 Query: 764 YVGPFVRK----QERENVFGSPKF----NNVYVKNLSESTTEDNLKELFGNFGPITSVIV 919 V + +ER + K + +KNL T+ +++ LFG +G + SV V Sbjct: 674 VVRASNKAMDAAEERRREDTAKKIAARRTKIIIKNLPFQATKKDVRSLFGAYGQLRSVRV 733 Query: 920 VRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEK 1099 + D +R FGF +F + +A +A++ L + L + A +++ Q E EK Sbjct: 734 PKKFDRSARGFGFADFVSAREAENAMDALKNTHLLGRRLVLEFANEEAVDPEQEIEQIEK 793 Query: 1100 SNKETADR 1123 E DR Sbjct: 794 KVGEQLDR 801 Score = 53.5 bits (127), Expect = 4e-06 Identities = 55/241 (22%), Positives = 98/241 (40%), Gaps = 30/241 (12%) Frame = +2 Query: 689 QYEQDESAQ-NAINELNGMLLNDKKVYVGPFVRKQERE-NVFGSPKFNNVYVKNLSESTT 862 Q + D S++ +++ +D K V V ++E + N+ + ++V+NL + Sbjct: 254 QRKPDPSSEPETVSKAGAQHSDDDKAAVESSVEEEEVDTNIEHIRLSSRLFVRNLPYDAS 313 Query: 863 EDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELY 1039 E +L+ +F FG I + + S+ F +V + PD AV A ++L+GK F + ++ Sbjct: 314 ESDLEPVFSKFGKIEEIHVAFDTRSTTSKGFAYVQYIEPDAAVQAYKELDGKHFQGRLMH 373 Query: 1040 VGRAQKKS--------------EREMQLKESFEKS-----------NKETADRNQGTNLY 1144 + A K +++ Q+K E S N + + L Sbjct: 374 ILPATAKKTYKIDEHELSKLPLKKQKQIKRKLEASSSTFSWNSLYMNTDAVMSSVAERLG 433 Query: 1145 LKNLD--GSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAM 1318 + D D +K+ AE I K +NGVN AFK E A++ Sbjct: 434 VSKADLLDPTSADAAVKQAHAETHVIQETKAYFTANGVN----LDAFKQRERGNTAILVK 489 Query: 1319 N 1321 N Sbjct: 490 N 490 Score = 49.3 bits (116), Expect = 7e-05 Identities = 66/283 (23%), Positives = 119/283 (42%), Gaps = 11/283 (3%) Frame = +2 Query: 548 AANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFVQYEQDESAQNAI 724 ++ +F++NL L FS FG I VA + S SKG+ +VQY + ++A A Sbjct: 300 SSRLFVRNLPYDASESDLEPVFSKFGKIEEIHVAFDTRSTTSKGFAYVQYIEPDAAVQAY 359 Query: 725 NELNGMLLNDKKVYVGPFVRKQ-----ERENVFGSPKFNNVYVKNLSESTTEDNLKELFG 889 EL+G + +++ P K+ E E K + L S++ + L+ Sbjct: 360 KELDGKHFQGRLMHILPATAKKTYKIDEHELSKLPLKKQKQIKRKLEASSSTFSWNSLYM 419 Query: 890 NFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSER 1069 N + S + R K+ + +P A AV+ + E +V Sbjct: 420 NTDAVMSSVAERLGVSKA------DLLDPTSADAAVKQAHA------ETHV--------- 458 Query: 1070 EMQLKESFEKSNKETAD----RNQG-TNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVM 1234 +Q +++ +N D R +G T + +KN V D+ L++LF +G IT +++ Sbjct: 459 -IQETKAYFTANGVNLDAFKQRERGNTAILVKNFSYGVKVDD-LRKLFEPYGQIT--RLL 514 Query: 1235 RDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALA 1363 +G V F ++A +A + + VG L++ A Sbjct: 515 MPPSGT---IAIVEFARPDEAQKAFKGLAYRKVGDSILFLEKA 554
>Q5RBD3:RBMS3_PONPY RNA-binding motif, single-stranded-interacting protein 3 - Pongo| pygmaeus (Orangutan) Length = 436 Score = 78.2 bits (191), Expect = 1e-13 Identities = 45/152 (29%), Positives = 72/152 (47%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LY+ L D L + G +VS + D NT GY +V+F SPA A +A+ L Sbjct: 62 LYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAAQKAVASL 121 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 V + + +DP+ N++I NL S+D + L + FG+++S ++ Sbjct: 122 KANGVQAQMAK--QQEQDPT-------NLYISNLPISMDEQELENMLKPFGHVISTRILR 172 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLL 748 + +G S+G GF + E E + I NG L Sbjct: 173 DANGVSRGVGFARMESTEKCEVVIQHFNGKYL 204 Score = 74.3 bits (181), Expect = 2e-12 Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 2/175 (1%) Frame = +2 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRC--FGFVNFENPDDAVHAVE 1000 N+Y++ L TT+ +L +L +G I S + D ++C +GFV+F++P A AV Sbjct: 61 NLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAI-LDKNTNQCKGYGFVDFDSPAAAQKAVA 119 Query: 1001 DLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDE 1180 L +AQ ++E TNLY+ NL S+D+ E Sbjct: 120 SLKANGV--------QAQMAKQQEQD-----------------PTNLYISNLPISMDEQE 154 Query: 1181 KLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKP 1345 L+ + FG + S +++RD+NGV++G GF +S+E + NGK + + P Sbjct: 155 -LENMLKPFGHVISTRILRDANGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPP 208
>Q8BWL5:RBMS3_MOUSE RNA-binding motif, single-stranded-interacting protein 3 - Mus| musculus (Mouse) Length = 431 Score = 78.2 bits (191), Expect = 1e-13 Identities = 45/152 (29%), Positives = 72/152 (47%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LY+ L D L + G +VS + D NT GY +V+F SPA A +A+ L Sbjct: 58 LYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAAQKAVASL 117 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 V + + +DP+ N++I NL S+D + L + FG+++S ++ Sbjct: 118 KANGVQAQMAK--QQEQDPT-------NLYISNLPISMDEQELENMLKPFGHVISTRILR 168 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLL 748 + +G S+G GF + E E + I NG L Sbjct: 169 DANGVSRGVGFARMESTEKCEVVIQHFNGKYL 200 Score = 74.3 bits (181), Expect = 2e-12 Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 2/175 (1%) Frame = +2 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRC--FGFVNFENPDDAVHAVE 1000 N+Y++ L TT+ +L +L +G I S + D ++C +GFV+F++P A AV Sbjct: 57 NLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAI-LDKNTNQCKGYGFVDFDSPAAAQKAVA 115 Query: 1001 DLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDE 1180 L +AQ ++E TNLY+ NL S+D+ E Sbjct: 116 SLKANGV--------QAQMAKQQEQD-----------------PTNLYISNLPISMDEQE 150 Query: 1181 KLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKP 1345 L+ + FG + S +++RD+NGV++G GF +S+E + NGK + + P Sbjct: 151 -LENMLKPFGHVISTRILRDANGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPP 204
>Q6XE24:RBMS3_HUMAN RNA-binding motif, single-stranded-interacting protein 3 - Homo| sapiens (Human) Length = 437 Score = 78.2 bits (191), Expect = 1e-13 Identities = 45/152 (29%), Positives = 72/152 (47%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LY+ L D L + G +VS + D NT GY +V+F SPA A +A+ L Sbjct: 63 LYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAAQKAVASL 122 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 V + + +DP+ N++I NL S+D + L + FG+++S ++ Sbjct: 123 KANGVQAQMAK--QQEQDPT-------NLYISNLPISMDEQELENMLKPFGHVISTRILR 173 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLL 748 + +G S+G GF + E E + I NG L Sbjct: 174 DANGVSRGVGFARMESTEKCEVVIQHFNGKYL 205 Score = 74.3 bits (181), Expect = 2e-12 Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 2/175 (1%) Frame = +2 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRC--FGFVNFENPDDAVHAVE 1000 N+Y++ L TT+ +L +L +G I S + D ++C +GFV+F++P A AV Sbjct: 62 NLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAI-LDKNTNQCKGYGFVDFDSPAAAQKAVA 120 Query: 1001 DLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDE 1180 L +AQ ++E TNLY+ NL S+D+ E Sbjct: 121 SLKANGV--------QAQMAKQQEQD-----------------PTNLYISNLPISMDEQE 155 Query: 1181 KLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKP 1345 L+ + FG + S +++RD+NGV++G GF +S+E + NGK + + P Sbjct: 156 -LENMLKPFGHVISTRILRDANGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPP 209
>O60506:HNRPQ_HUMAN Heterogeneous nuclear ribonucleoprotein Q - Homo sapiens (Human)| Length = 623 Score = 78.2 bits (191), Expect = 1e-13 Identities = 68/276 (24%), Positives = 129/276 (46%), Gaps = 14/276 (5%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 ++VG + + + +L +F + G + +R+ D T ++ GYA+V F + A A+++ Sbjct: 164 IFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLY 223 Query: 473 NFTPV-NGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVA 649 N + +GK I + S + +F+ ++ KS + + + FS L+ + Sbjct: 224 NNHEIRSGKHIGVCISVAN--------NRLFVGSIPKSKTKEQILEEFSKVTEGLTDVIL 275 Query: 650 TEMSGESK---GYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSP- 817 + K G+ F++YE ++A A L KV V V E + P Sbjct: 276 YHQPDDKKKNRGFCFLEYEDHKTAAQARRR-----LMSGKVKVWGNVGTVEWADPIEDPD 330 Query: 818 -----KFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDD 982 K ++V+NL+ + TE+ L++ F FG + V K + + F++F+ D Sbjct: 331 PEVMAKVKVLFVRNLANTVTEEILEKAFSQFGKLERV-------KKLKDYAFIHFDERDG 383 Query: 983 AVHAVEDLNGKKFDDKELYVGRA----QKKSEREMQ 1078 AV A+E++NGK + + + + A QK+ ER+ Q Sbjct: 384 AVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQ 419
>Q3ZBP3:RBMS1_BOVIN RNA-binding motif, single-stranded-interacting protein 1 - Bos| taurus (Bovine) Length = 403 Score = 77.8 bits (190), Expect = 2e-13 Identities = 44/152 (28%), Positives = 72/152 (47%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LY+ L + D L + G +VS + D T GY +V+F SPA A +A+ L Sbjct: 64 LYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAAQKAVSAL 123 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 + V + + +DP+ N++I NL S+D + L + FG ++S ++ Sbjct: 124 KASGVQAQMAK--QQEQDPT-------NLYISNLPLSMDEQELENMLKPFGQVISTRILR 174 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLL 748 + SG S+G GF + E E + I NG + Sbjct: 175 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFI 206 Score = 74.7 bits (182), Expect = 2e-12 Identities = 50/174 (28%), Positives = 86/174 (49%), Gaps = 1/174 (0%) Frame = +2 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHAVED 1003 N+Y++ L +TT+ +L +L +G I S ++ K + +GFV+F++P A AV Sbjct: 63 NLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAAQKAVSA 122 Query: 1004 LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEK 1183 L K S + Q+ + E+ TNLY+ NL S+D+ E Sbjct: 123 L----------------KASGVQAQMAKQQEQDP---------TNLYISNLPLSMDEQE- 156 Query: 1184 LKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKP 1345 L+ + FG + S +++RDS+G ++G GF +S+E + NGK + + P Sbjct: 157 LENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPP 210
>Q7TP47:HNRPQ_RAT Heterogeneous nuclear ribonucleoprotein Q - Rattus norvegicus (Rat)| Length = 533 Score = 77.8 bits (190), Expect = 2e-13 Identities = 68/276 (24%), Positives = 129/276 (46%), Gaps = 14/276 (5%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 ++VG + + + +L +F + G + +R+ D T ++ GYA+V F + A A+++ Sbjct: 74 IFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLY 133 Query: 473 NFTPV-NGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVA 649 N + +GK I + S + +F+ ++ KS + + + FS L+ + Sbjct: 134 NNHEIRSGKHIGVCISVAN--------NRLFVGSIPKSKTKEQILEEFSKVTEGLTDVIL 185 Query: 650 TEMSGESK---GYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSP- 817 + K G+ F++YE ++A A L KV V V E + P Sbjct: 186 YHQPDDKKKNRGFCFLEYEDHKTAAQARRR-----LMSGKVKVWGNVGTVEWADPIEDPD 240 Query: 818 -----KFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDD 982 K ++V+NL+ + TE+ L++ F FG + V K + + F++F+ D Sbjct: 241 PEVMAKVKVLFVRNLANTVTEEILEKSFSQFGKLERV-------KKLKDYAFIHFDERDG 293 Query: 983 AVHAVEDLNGKKFDDKELYVGRA----QKKSEREMQ 1078 AV A+E++NGK + + + + A QK+ ER+ Q Sbjct: 294 AVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQ 329
>Q7TMK9:HNRPQ_MOUSE Heterogeneous nuclear ribonucleoprotein Q - Mus musculus (Mouse)| Length = 623 Score = 77.8 bits (190), Expect = 2e-13 Identities = 68/276 (24%), Positives = 129/276 (46%), Gaps = 14/276 (5%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 ++VG + + + +L +F + G + +R+ D T ++ GYA+V F + A A+++ Sbjct: 164 IFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLY 223 Query: 473 NFTPV-NGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVA 649 N + +GK I + S + +F+ ++ KS + + + FS L+ + Sbjct: 224 NNHEIRSGKHIGVCISVAN--------NRLFVGSIPKSKTKEQILEEFSKVTEGLTDVIL 275 Query: 650 TEMSGESK---GYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSP- 817 + K G+ F++YE ++A A L KV V V E + P Sbjct: 276 YHQPDDKKKNRGFCFLEYEDHKTAAQARRR-----LMSGKVKVWGNVGTVEWADPIEDPD 330 Query: 818 -----KFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDD 982 K ++V+NL+ + TE+ L++ F FG + V K + + F++F+ D Sbjct: 331 PEVMAKVKVLFVRNLANTVTEEILEKSFSQFGKLERV-------KKLKDYAFIHFDERDG 383 Query: 983 AVHAVEDLNGKKFDDKELYVGRA----QKKSEREMQ 1078 AV A+E++NGK + + + + A QK+ ER+ Q Sbjct: 384 AVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQ 419
>O17310:SXL_MUSDO Sex-lethal homolog - Musca domestica (House fly)| Length = 324 Score = 77.4 bits (189), Expect = 2e-13 Identities = 48/154 (31%), Positives = 81/154 (52%), Gaps = 2/154 (1%) Frame = +2 Query: 554 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYEQDESAQNAINE 730 N+ + L + + ++ LY F G I +C++ + +G S GY FV + + AQNAI Sbjct: 103 NLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKT 162 Query: 731 LNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITS 910 +NG+ + +K++ V + R S K N+YV NL + T+D L+++FG +G I Sbjct: 163 VNGITVRNKRLKVS-YARPGGE-----SIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQ 216 Query: 911 VIVVRAD-DGKSRCFGFVNFENPDDAVHAVEDLN 1009 ++R G+ R FV F ++A A+ LN Sbjct: 217 KNILRDKLTGRPRGVAFVRFNKREEAQEAISALN 250 Score = 74.3 bits (181), Expect = 2e-12 Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 4/191 (2%) Frame = +2 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRA-DDGKSRCFGFVNFENPDDAVHAVED 1003 N+ V L + T+ L LF GPI + +++ G S + FV+F + DA +A++ Sbjct: 103 NLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKT 162 Query: 1004 LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEK 1183 +NG +K L V A+ E +K+ TNLY+ NL ++ DDE Sbjct: 163 VNGITVRNKRLKVSYARPGGE---SIKD---------------TNLYVTNLPRTITDDE- 203 Query: 1184 LKELFAEFGTITSCKVMRDS-NGVNKGSGFVAFKSSEDATRALVAMNGKMV--GSKPLYV 1354 L+++F ++G I ++RD G +G FV F E+A A+ A+N + S+PL V Sbjct: 204 LEKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAISALNNVIPEGASQPLTV 263 Query: 1355 ALAQRKEERRA 1387 LA+ + +A Sbjct: 264 RLAEEHGKMKA 274 Score = 46.6 bits (109), Expect = 5e-04 Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 1/80 (1%) Frame = +2 Query: 1130 GTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATRA 1306 GTNL + L + D E L LF G I +C++M+D G + G FV F S DA A Sbjct: 101 GTNLIVNYLPQDMTDRE-LYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNA 159 Query: 1307 LVAMNGKMVGSKPLYVALAQ 1366 + +NG V +K L V+ A+ Sbjct: 160 IKTVNGITVRNKRLKVSYAR 179
>Q5PQP1:RBMS1_RAT RNA-binding motif, single-stranded-interacting protein 1 - Rattus| norvegicus (Rat) Length = 403 Score = 77.4 bits (189), Expect = 2e-13 Identities = 45/152 (29%), Positives = 72/152 (47%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LY+ L + D L + G +VS + D T GY +V+F SPA A +A+ L Sbjct: 64 LYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKAVSAL 123 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 + V + + +DP+ N++I NL S+D + L + FG ++S +V Sbjct: 124 KASGVQAQMAK--QQEQDPT-------NLYISNLPLSMDEQELENMLKPFGQVISTRVLR 174 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLL 748 + SG S+G GF + E E + I NG + Sbjct: 175 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFI 206 Score = 75.5 bits (184), Expect = 9e-13 Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 2/175 (1%) Frame = +2 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRC--FGFVNFENPDDAVHAVE 1000 N+Y++ L +TT+ +L +L +G I S + D ++C +GFV+F++P A AV Sbjct: 63 NLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAI-LDKATNKCKGYGFVDFDSPAAAQKAVS 121 Query: 1001 DLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDE 1180 L K S + Q+ + E+ TNLY+ NL S+D+ E Sbjct: 122 AL----------------KASGVQAQMAKQQEQDP---------TNLYISNLPLSMDEQE 156 Query: 1181 KLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKP 1345 L+ + FG + S +V+RDS+G ++G GF +S+E + NGK + + P Sbjct: 157 -LENMLKPFGQVISTRVLRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPP 210
>Q24668:SXL_DROSU Protein sex-lethal - Drosophila subobscura (Fruit fly)| Length = 354 Score = 77.0 bits (188), Expect = 3e-13 Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 2/160 (1%) Frame = +2 Query: 536 RKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYEQDESA 712 ++S N+ + L + + ++ LY F A G I +C++ + +G S GY FV + + + Sbjct: 122 QRSSNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDS 181 Query: 713 QNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGN 892 Q AI LNG+ + +K++ V + E++ K N+YV NL + T+D L +FG Sbjct: 182 QRAIKVLNGITVRNKRLKVS--YARPGGESI----KDTNLYVTNLPRTITDDQLDTIFGK 235 Query: 893 FGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVHAVEDLN 1009 +G I ++R G+ R FV + ++A A+ LN Sbjct: 236 YGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALN 275 Score = 74.3 bits (181), Expect = 2e-12 Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 4/191 (2%) Frame = +2 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRA-DDGKSRCFGFVNFENPDDAVHAVED 1003 N+ V L + T+ L LF GPI + ++R G S + FV+F + D+ A++ Sbjct: 128 NLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKV 187 Query: 1004 LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEK 1183 LNG +K L V A+ E +K+ TNLY+ NL ++ DD+ Sbjct: 188 LNGITVRNKRLKVSYARPGGE---SIKD---------------TNLYVTNLPRTITDDQ- 228 Query: 1184 LKELFAEFGTITSCKVMRDS-NGVNKGSGFVAFKSSEDATRALVAMNGKMV--GSKPLYV 1354 L +F ++G+I ++RD G +G FV + E+A A+ A+N + GS+PL V Sbjct: 229 LDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSV 288 Query: 1355 ALAQRKEERRA 1387 LAQ + +A Sbjct: 289 RLAQEHGKAKA 299 Score = 50.1 bits (118), Expect = 4e-05 Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 1/83 (1%) Frame = +2 Query: 1121 RNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDA 1297 R+ TNL + L + D E L LF G I +C++MRD G + G FV F S D+ Sbjct: 123 RSSNTNLIVNYLPQDMTDRE-LYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDS 181 Query: 1298 TRALVAMNGKMVGSKPLYVALAQ 1366 RA+ +NG V +K L V+ A+ Sbjct: 182 QRAIKVLNGITVRNKRLKVSYAR 204 Score = 40.8 bits (94), Expect = 0.025 Identities = 21/61 (34%), Positives = 33/61 (54%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LYV +L ++ D QL +F + GS+V + RD T G A+V ++ +A A+ L Sbjct: 215 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 274 Query: 473 N 475 N Sbjct: 275 N 275
>Q91W59:RBMS1_MOUSE RNA-binding motif, single-stranded-interacting protein 1 - Mus| musculus (Mouse) Length = 403 Score = 77.0 bits (188), Expect = 3e-13 Identities = 45/152 (29%), Positives = 71/152 (46%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LY+ L + D L + G +VS + D T GY +V+F SPA A +A+ L Sbjct: 64 LYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKAVSAL 123 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 V + + +DP+ N++I NL S+D + L + FG ++S +V Sbjct: 124 KANGVQAQMAK--QQEQDPT-------NLYISNLPLSMDEQELENMLKPFGQVISTRVLR 174 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLL 748 + SG S+G GF + E E + I NG + Sbjct: 175 DSSGASRGVGFARMESTEKCEAVIGHFNGKFI 206 Score = 75.1 bits (183), Expect = 1e-12 Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 2/175 (1%) Frame = +2 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRC--FGFVNFENPDDAVHAVE 1000 N+Y++ L +TT+ +L +L +G I S + D ++C +GFV+F++P A AV Sbjct: 63 NLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAI-LDKATNKCKGYGFVDFDSPAAAQKAVS 121 Query: 1001 DLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDE 1180 L +AQ ++E TNLY+ NL S+D+ E Sbjct: 122 ALKANGV--------QAQMAKQQEQD-----------------PTNLYISNLPLSMDEQE 156 Query: 1181 KLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKP 1345 L+ + FG + S +V+RDS+G ++G GF +S+E + NGK + + P Sbjct: 157 -LENMLKPFGQVISTRVLRDSSGASRGVGFARMESTEKCEAVIGHFNGKFIKTPP 210
>P29558:RBMS1_HUMAN RNA-binding motif, single-stranded-interacting protein 1 - Homo| sapiens (Human) Length = 406 Score = 77.0 bits (188), Expect = 3e-13 Identities = 44/152 (28%), Positives = 71/152 (46%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LY+ L D L + G +VS + D T GY +V+F SPA A +A+ L Sbjct: 64 LYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAAQKAVSAL 123 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 + V + + +DP+ N++I NL S+D + L + FG ++S ++ Sbjct: 124 KASGVQAQMAK--QQEQDPT-------NLYISNLPLSMDEQELENMLKPFGQVISTRILR 174 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLL 748 + SG S+G GF + E E + I NG + Sbjct: 175 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFI 206 Score = 73.9 bits (180), Expect = 3e-12 Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 1/174 (0%) Frame = +2 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHAVED 1003 N+Y++ L TT+ +L +L +G I S ++ K + +GFV+F++P A AV Sbjct: 63 NLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAAQKAVSA 122 Query: 1004 LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEK 1183 L K S + Q+ + E+ TNLY+ NL S+D+ E Sbjct: 123 L----------------KASGVQAQMAKQQEQDP---------TNLYISNLPLSMDEQE- 156 Query: 1184 LKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKP 1345 L+ + FG + S +++RDS+G ++G GF +S+E + NGK + + P Sbjct: 157 LENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPP 210
>Q8CGC6:RBM28_MOUSE RNA-binding protein 28 - Mus musculus (Mouse)| Length = 750 Score = 77.0 bits (188), Expect = 3e-13 Identities = 98/424 (23%), Positives = 167/424 (39%), Gaps = 54/424 (12%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L+VG L S + QL ++FSQVG V V + ++ G+ YV FS D RAL+ Sbjct: 6 LFVGRLPPSARSDQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALK-- 63 Query: 473 NFTPVNGKPIRIMYS--------------------NRDPSSRKSGAAN----IFIKNLDK 580 T G I + + ++P +K+ A+ + I+NL Sbjct: 64 EITTFEGCKIDVTVAKKKLRNKSKETRKNENAESPKKEPKHKKAKVADKKARLIIRNLSF 123 Query: 581 SIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKK 760 L F+ +G +L + + G+ +G+ FVQ++ A A+ N + + Sbjct: 124 KCSEDDLKAVFTHYGTVLEVNIPKKPDGKMRGFAFVQFKNLLEAGKALKGANMKEIKGRT 183 Query: 761 VYV----------------GPFVRKQERENVFGSPKFN---NVYVKNLSESTTEDNLKEL 883 V V P V+K S K N V++ + +D+ + Sbjct: 184 VAVDWAVAKDKYKDAQHASAPGVKKSSDRKPKESGKKNCRVEEQVEDSDDEEDDDSHDDE 243 Query: 884 FGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKS 1063 I S + V K R + E D + + G +D+ G +S Sbjct: 244 EERESTIASPVSVHKRAVK-RAAPEESIEEDDSYEDSDLEEGGSSYDE-----GTVDSES 297 Query: 1064 EREMQLKE----SFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCK- 1228 E Q E S +K K +D +G ++++NL ++E L E+ +FG + + Sbjct: 298 SAEDQEDEDVPVSEKKKRKLPSDVTEGKTVFIRNLSFD-SEEEALGEVLQQFGDLKYVRV 356 Query: 1229 VMRDSNGVNKGSGFVAFKSSEDATRALVAMN------GKMVGSKPLYVALAQRKEERRAR 1390 V+ +KG F F + E A + L A + G + + L V LA ++E A+ Sbjct: 357 VLHPDTEHSKGCAFAQFMTQEAAQKCLAAASPEAEGGGLKLDGRQLKVDLAVTRDE-AAK 415 Query: 1391 LQAQ 1402 LQ + Sbjct: 416 LQTK 419 Score = 60.1 bits (144), Expect = 4e-08 Identities = 99/465 (21%), Positives = 178/465 (38%), Gaps = 97/465 (20%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L + +L + L VF+ G+V+ V + + + +M G+A+V F + +A +AL+ Sbjct: 116 LIIRNLSFKCSEDDLKAVFTHYGTVLEVNIPKKPDGKMR-GFAFVQFKNLLEAGKALKGA 174 Query: 473 NFTPVNGKPIRIMYS-------------------NRDPSSRKSGAANIFIKNLDKSIDNK 595 N + G+ + + ++ + D ++SG N ++ + D++ Sbjct: 175 NMKEIKGRTVAVDWAVAKDKYKDAQHASAPGVKKSSDRKPKESGKKNCRVEEQVEDSDDE 234 Query: 596 A---LYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVY 766 +D + ++ V+ + E+D+S +++ E G ++ V Sbjct: 235 EDDDSHDDEEERESTIASPVSVHKRAVKRAAPEESIEEDDSYEDSDLEEGGSSYDEGTVD 294 Query: 767 VGPFVRKQERENVFGSPKFNN-----------VYVKNLSESTTEDNLKELFGNFGPITSV 913 QE E+V S K V+++NLS + E+ L E+ FG + V Sbjct: 295 SESSAEDQEDEDVPVSEKKKRKLPSDVTEGKTVFIRNLSFDSEEEALGEVLQQFGDLKYV 354 Query: 914 -IVVRADDGKSRCFGFVNFENPDDAVHAV------EDLNGKKFDDKE------------- 1033 +V+ D S+ F F + A + + G K D ++ Sbjct: 355 RVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASPEAEGGGLKLDGRQLKVDLAVTRDEAA 414 Query: 1034 ---------------LYVGR----------AQKKSEREMQLKESFEKSNKETADRNQG-- 1132 LY+ R A+ S +M +E FE K +NQ Sbjct: 415 KLQTKKVKKPTGTRNLYLAREGLIRAGTKAAEGVSAADMAKRERFELL-KHQKLKNQNIF 473 Query: 1133 ---TNLYLKNLDGSVDDDEKLKELF----AEFGT-ITSCKVMRDSNGV-------NKGSG 1267 T L L N +VDD + K L E G I C+VMRD GV + G Sbjct: 474 VSQTRLCLHNFPKAVDDKQLRKLLLEATRGEKGVRIKECRVMRDLKGVHGKMKGQSLGYA 533 Query: 1268 FVAFKSSEDATRALVAMNG--KMVGSKPLYVALAQRKEERRARLQ 1396 F F+ E A RAL N ++ GS+ + ++ R+ +++ Sbjct: 534 FAEFQKHEHALRALRHFNNNPEIFGSQKRPIVEFSLEDRRKLKVK 578
>Q3ZC34:RBMS2_BOVIN RNA-binding motif, single-stranded-interacting protein 2 - Bos| taurus (Bovine) Length = 407 Score = 76.6 bits (187), Expect = 4e-13 Identities = 44/149 (29%), Positives = 70/149 (46%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LY+ L S D L + G +VS + D T GY +V+F SP+ A +A+ L Sbjct: 58 LYIRGLQPSTTDQDLVKLCQSYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTAL 117 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 + V + + +DP+ N++I NL S+D + L FG ++S ++ Sbjct: 118 KASGVQAQMAK--QQEQDPT-------NLYISNLPLSMDEQELEGMLKPFGQVISTRILR 168 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNG 739 + SG S+G GF + E E + I NG Sbjct: 169 DTSGTSRGVGFARMESTEKCEAIITHFNG 197 Score = 76.3 bits (186), Expect = 5e-13 Identities = 50/174 (28%), Positives = 87/174 (50%), Gaps = 1/174 (0%) Frame = +2 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHAVED 1003 N+Y++ L STT+ +L +L ++G I S ++ K + +GFV+F++P A AV Sbjct: 57 NLYIRGLQPSTTDQDLVKLCQSYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTA 116 Query: 1004 LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEK 1183 L K S + Q+ + E+ TNLY+ NL S+D+ E Sbjct: 117 L----------------KASGVQAQMAKQQEQDP---------TNLYISNLPLSMDEQE- 150 Query: 1184 LKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKP 1345 L+ + FG + S +++RD++G ++G GF +S+E + NGK + + P Sbjct: 151 LEGMLKPFGQVISTRILRDTSGTSRGVGFARMESTEKCEAIITHFNGKYIKTPP 204
>P19339:SXL_DROME Protein sex-lethal - Drosophila melanogaster (Fruit fly)| Length = 354 Score = 75.5 bits (184), Expect = 9e-13 Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 2/159 (1%) Frame = +2 Query: 539 KSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYEQDESAQ 715 ++ N+ + L + + ++ LY F A G I +C++ + +G S GY FV + + +Q Sbjct: 121 RASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQ 180 Query: 716 NAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNF 895 AI LNG+ + +K++ V + E++ K N+YV NL + T+D L +FG + Sbjct: 181 RAIKVLNGITVRNKRLKVS--YARPGGESI----KDTNLYVTNLPRTITDDQLDTIFGKY 234 Query: 896 GPITSVIVVRAD-DGKSRCFGFVNFENPDDAVHAVEDLN 1009 G I ++R G+ R FV + ++A A+ LN Sbjct: 235 GSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALN 273 Score = 73.9 bits (180), Expect = 3e-12 Identities = 67/249 (26%), Positives = 116/249 (46%), Gaps = 6/249 (2%) Frame = +2 Query: 659 SGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNN--V 832 S + G G + + ++ N++N L G+ L +++ P+ +N + Sbjct: 79 SANNLGGGNMCHLPPMASNNSLNNLCGLSLGSGG-----------SDDLMNDPRASNTNL 127 Query: 833 YVKNLSESTTEDNLKELFGNFGPITSVIVVRA-DDGKSRCFGFVNFENPDDAVHAVEDLN 1009 V L + T+ L LF GPI + ++R G S + FV+F + D+ A++ LN Sbjct: 128 IVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLN 187 Query: 1010 GKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLK 1189 G +K L V A+ E +K+ TNLY+ NL ++ DD+ L Sbjct: 188 GITVRNKRLKVSYARPGGE---SIKD---------------TNLYVTNLPRTITDDQ-LD 228 Query: 1190 ELFAEFGTITSCKVMRDS-NGVNKGSGFVAFKSSEDATRALVAMNGKMV--GSKPLYVAL 1360 +F ++G+I ++RD G +G FV + E+A A+ A+N + GS+PL V L Sbjct: 229 TIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRL 288 Query: 1361 AQRKEERRA 1387 A+ + +A Sbjct: 289 AEEHGKAKA 297 Score = 40.8 bits (94), Expect = 0.025 Identities = 21/61 (34%), Positives = 33/61 (54%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LYV +L ++ D QL +F + GS+V + RD T G A+V ++ +A A+ L Sbjct: 213 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 272 Query: 473 N 475 N Sbjct: 273 N 273
>Q8VC70:RBMS2_MOUSE RNA-binding motif, single-stranded-interacting protein 2 - Mus| musculus (Mouse) Length = 383 Score = 75.5 bits (184), Expect = 9e-13 Identities = 43/149 (28%), Positives = 69/149 (46%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LY+ L D L + G +VS + D T GY +V+F SP+ A +A+ L Sbjct: 60 LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSSAQKAVTAL 119 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 + V + + +DP+ N++I NL S+D + L FG ++S ++ Sbjct: 120 KASGVQAQMAK--QQEQDPT-------NLYISNLPLSMDEQELEGMLKPFGQVISTRILR 170 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNG 739 + SG S+G GF + E E + I NG Sbjct: 171 DTSGASRGVGFARMESTEKCEAIITHFNG 199 Score = 74.3 bits (181), Expect = 2e-12 Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 1/174 (0%) Frame = +2 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHAVED 1003 N+Y++ L TT+ +L +L +G I S ++ K + +GFV+F++P A AV Sbjct: 59 NLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSSAQKAVTA 118 Query: 1004 LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEK 1183 L K S + Q+ + E+ TNLY+ NL S+D+ E Sbjct: 119 L----------------KASGVQAQMAKQQEQDP---------TNLYISNLPLSMDEQE- 152 Query: 1184 LKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKP 1345 L+ + FG + S +++RD++G ++G GF +S+E + NGK + + P Sbjct: 153 LEGMLKPFGQVISTRILRDTSGASRGVGFARMESTEKCEAIITHFNGKYIKTPP 206
>Q9UT83:MUG28_SCHPO Meiotically up-regulated gene 28 protein - Schizosaccharomyces pombe| (Fission yeast) Length = 609 Score = 75.5 bits (184), Expect = 9e-13 Identities = 40/94 (42%), Positives = 64/94 (68%), Gaps = 2/94 (2%) Frame = +2 Query: 1136 NLYLKNLDGS-VDDDEKLKELFAEFGTITSCKVMR-DSNGVNKGSGFVAFKSSEDATRAL 1309 NL++KNLD + V + ++L+ELF++FG I SC + S ++KG GFV+F +A +A+ Sbjct: 420 NLFVKNLDDNIVGNTQQLEELFSKFGRIKSCTLASYPSTEISKGYGFVSFSHPFEAVQAI 479 Query: 1310 VAMNGKMVGSKPLYVALAQRKEERRARLQAQFSQ 1411 +NG + G K L+V A+++E+R+ RL A FSQ Sbjct: 480 NTLNGVLFGKKRLFVNYAEKREDRKKRLSAIFSQ 513 Score = 65.9 bits (159), Expect = 7e-10 Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 3/85 (3%) Frame = +2 Query: 554 NIFIKNLDKSI--DNKALYDTFSAFGNILSCKVATEMSGE-SKGYGFVQYEQDESAQNAI 724 N+F+KNLD +I + + L + FS FG I SC +A+ S E SKGYGFV + A AI Sbjct: 420 NLFVKNLDDNIVGNTQQLEELFSKFGRIKSCTLASYPSTEISKGYGFVSFSHPFEAVQAI 479 Query: 725 NELNGMLLNDKKVYVGPFVRKQERE 799 N LNG+L K+++V ++++R+ Sbjct: 480 NTLNGVLFGKKRLFVNYAEKREDRK 504 Score = 62.0 bits (149), Expect = 1e-08 Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 3/95 (3%) Frame = +2 Query: 827 NVYVKNLSESTTEDN--LKELFGNFGPITSVIVVRADDGK-SRCFGFVNFENPDDAVHAV 997 N++VKNL ++ + L+ELF FG I S + + S+ +GFV+F +P +AV A+ Sbjct: 420 NLFVKNLDDNIVGNTQQLEELFSKFGRIKSCTLASYPSTEISKGYGFVSFSHPFEAVQAI 479 Query: 998 EDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKS 1102 LNG F K L+V A+K+ +R+ +L F +S Sbjct: 480 NTLNGVLFGKKRLFVNYAEKREDRKKRLSAIFSQS 514 Score = 40.8 bits (94), Expect = 0.025 Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Frame = +2 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVV-----RADDGKS-RCFGFVNFENPDDAV 988 ++YV NL + +L ELF FG + ++ ++ D KS F F+ FEN A Sbjct: 21 SIYVGNLPSTCQSSDLHELFEPFGNFSKFHMLSRKKNKSTDSKSPTLFAFITFENKCSAD 80 Query: 989 HAVEDLNGKKFDDKELYV 1042 +A+ LNG F L V Sbjct: 81 NAIASLNGSSFQGNTLKV 98 Score = 37.7 bits (86), Expect = 0.21 Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 6/81 (7%) Frame = +2 Query: 515 SNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKG------ 676 S ++ S K +I++ NL + + L++ F FGN + + +S Sbjct: 8 SEKNKRSTKKCEISIYVGNLPSTCQSSDLHELFEPFGNFSKFHMLSRKKNKSTDSKSPTL 67 Query: 677 YGFVQYEQDESAQNAINELNG 739 + F+ +E SA NAI LNG Sbjct: 68 FAFITFENKCSADNAIASLNG 88
>Q9HEQ9:TCG1_SCHPO Single-stranded TG1-3 DNA-binding protein - Schizosaccharomyces pombe| (Fission yeast) Length = 348 Score = 74.7 bits (182), Expect = 2e-12 Identities = 86/327 (26%), Positives = 143/327 (43%), Gaps = 30/327 (9%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRV----CRDVNTRMSLGYAYVNFSSPADAARA 460 ++VG L S + +++ +F VG+V V + R + G A+V F++ D +A Sbjct: 46 VFVGRLSTSTKKSEIRSLFETVGTVRKVTIPFRRVRRGTRLVPSGIAFVTFNNQEDVDKA 105 Query: 461 LEMLNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSID-NKALYDTFSAFGNILS 637 +E LN ++ + I + + P + IK+ KS + N +T ++ N S Sbjct: 106 IETLNGKTLDDREIVVQKAR--PVQEQP------IKDRKKSKNKNGEEPETSTSVENAES 157 Query: 638 CKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSP 817 K +++ + E + + + NE NG+ DKK + E + GS Sbjct: 158 AKGSSD-----------ENEANTATAPSSNEANGV---DKK--------QNEIKGKGGSG 195 Query: 818 KF-------NNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRA-------------DDG 937 K N++YV LS + T + LKE+F + P + I VR+ + Sbjct: 196 KNKAKPLPPNSIYVSGLSVTLTNEGLKEMFDAYNPTRARIAVRSLPPYIIRRIKLRGEQR 255 Query: 938 KSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRA-----QKKSEREMQLKESFEKS 1102 + R FGFV+F N +D A+E++NGK+ D L V A ++ E E E E S Sbjct: 256 RGRGFGFVSFANAEDQSRAIEEMNGKQVGDLTLVVKSAVFREDKQNDENEKNENEPIEAS 315 Query: 1103 NKETADRNQGTNLYLKNLDGSVDDDEK 1183 E+A N + K VD +EK Sbjct: 316 --ESAPTNVSDSTEPK--ASEVDSEEK 338 Score = 62.8 bits (151), Expect = 6e-09 Identities = 60/257 (23%), Positives = 102/257 (39%), Gaps = 72/257 (28%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVV-----RADDGKSRCFGFVNFENPDDAVHA 994 V+V LS ST + ++ LF G + V + R FV F N +D A Sbjct: 46 VFVGRLSTSTKKSEIRSLFETVGTVRKVTIPFRRVRRGTRLVPSGIAFVTFNNQEDVDKA 105 Query: 995 VEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKE----------------TADRN 1126 +E LNGK DD+E+ V +A+ E+ ++ ++ + N E ++D N Sbjct: 106 IETLNGKTLDDREIVVQKARPVQEQPIKDRKKSKNKNGEEPETSTSVENAESAKGSSDEN 165 Query: 1127 QGT-------------------------------------NLYLKNLDGSVDDDEKLKEL 1195 + ++Y+ L ++ + E LKE+ Sbjct: 166 EANTATAPSSNEANGVDKKQNEIKGKGGSGKNKAKPLPPNSIYVSGLSVTLTN-EGLKEM 224 Query: 1196 FAEFGTITSCKV--------------MRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMV 1333 F + T ++ +R +G GFV+F ++ED +RA+ MNGK V Sbjct: 225 FDAYNP-TRARIAVRSLPPYIIRRIKLRGEQRRGRGFGFVSFANAEDQSRAIEEMNGKQV 283 Query: 1334 GSKPLYVALAQRKEERR 1384 G L V A +E+++ Sbjct: 284 GDLTLVVKSAVFREDKQ 300
>Q15434:RBMS2_HUMAN RNA-binding motif, single-stranded-interacting protein 2 - Homo| sapiens (Human) Length = 407 Score = 74.7 bits (182), Expect = 2e-12 Identities = 43/149 (28%), Positives = 69/149 (46%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LY+ L D L + G +VS + D T GY +V+F SP+ A +A+ L Sbjct: 58 LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTAL 117 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 + V + + +DP+ N++I NL S+D + L FG ++S ++ Sbjct: 118 KASGVQAQMAK--QQEQDPT-------NLYISNLPLSMDEQELEGMLKPFGQVISTRILR 168 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNG 739 + SG S+G GF + E E + I NG Sbjct: 169 DTSGTSRGVGFARMESTEKCEAIITHFNG 197 Score = 73.6 bits (179), Expect = 4e-12 Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 1/174 (0%) Frame = +2 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHAVED 1003 N+Y++ L TT+ +L +L +G I S ++ K + +GFV+F++P A AV Sbjct: 57 NLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTA 116 Query: 1004 LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEK 1183 L K S + Q+ + E+ TNLY+ NL S+D+ E Sbjct: 117 L----------------KASGVQAQMAKQQEQDP---------TNLYISNLPLSMDEQE- 150 Query: 1184 LKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKP 1345 L+ + FG + S +++RD++G ++G GF +S+E + NGK + + P Sbjct: 151 LEGMLKPFGQVISTRILRDTSGTSRGVGFARMESTEKCEAIITHFNGKYIKTPP 204
>P38922:HRB1_YEAST Protein HRB1 - Saccharomyces cerevisiae (Baker's yeast)| Length = 454 Score = 74.7 bits (182), Expect = 2e-12 Identities = 72/311 (23%), Positives = 124/311 (39%), Gaps = 22/311 (7%) Frame = +2 Query: 503 RIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYG 682 R + S + ++ + +IF+ NL + L + FS G ++ + T G +G G Sbjct: 145 RELDSTYEEKVNRNYSNSIFVGNLTYDSTPEDLTEFFSQIGKVVRADIITSR-GHHRGMG 203 Query: 683 FVQYEQDESAQNAINELNGMLLNDKKVYVG-----PFVRKQERE-----NVFGSPKFNNV 832 V++ + AI + +G D+K++V P +ER+ + + K + V Sbjct: 204 TVEFTNSDDVDRAIRQYDGAFFMDRKIFVRQDNPPPSNNIKERKALDRGELRHNRKTHEV 263 Query: 833 YVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNG 1012 VKNL S LK++F G + V DG S G V+F + D A+E NG Sbjct: 264 IVKNLPASVNWQALKDIFKECGNVAHADVELDGDGVSTGSGTVSFYDIKDLHRAIEKYNG 323 Query: 1013 KKFDDKELYVGRAQKKSER-----------EMQLKESFEKSNKETADRNQGTNL-YLKNL 1156 + L V + + + E K + + L Y NL Sbjct: 324 YSIEGNVLDVKSKESVHNHSDGDDVDIPMDDSPVNEEARKFTENVVGGGERNRLIYCSNL 383 Query: 1157 DGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVG 1336 S + L +LF G + + ++ DS G G V + + +DA + +N G Sbjct: 384 PFSTAKSD-LYDLFETIGKVNNAELRYDSKGAPTGIAVVEYDNVDDADVCIERLNNYNYG 442 Query: 1337 SKPLYVALAQR 1369 L ++ A+R Sbjct: 443 GCDLDISYAKR 453 Score = 71.2 bits (173), Expect = 2e-11 Identities = 70/293 (23%), Positives = 115/293 (39%), Gaps = 38/293 (12%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 ++VG+L L + FSQ+G VV + +G V F++ D RA+ Sbjct: 163 IFVGNLTYDSTPEDLTEFFSQIGKVVRADIITSRGHHRGMGT--VEFTNSDDVDRAIRQY 220 Query: 473 NFTPVNGKPIRIMYSNRDPSS----RKS----------GAANIFIKNLDKSIDNKALYDT 610 + + I + N PS+ RK+ + +KNL S++ +AL D Sbjct: 221 DGAFFMDRKIFVRQDNPPPSNNIKERKALDRGELRHNRKTHEVIVKNLPASVNWQALKDI 280 Query: 611 FSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYV------- 769 F GN+ V + G S G G V + + AI + NG + + V Sbjct: 281 FKECGNVAHADVELDGDGVSTGSGTVSFYDIKDLHRAIEKYNGYSIEGNVLDVKSKESVH 340 Query: 770 -------------GPFVRKQER---ENVFGSPKFNN-VYVKNLSESTTEDNLKELFGNFG 898 V ++ R ENV G + N +Y NL ST + +L +LF G Sbjct: 341 NHSDGDDVDIPMDDSPVNEEARKFTENVVGGGERNRLIYCSNLPFSTAKSDLYDLFETIG 400 Query: 899 PITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQK 1057 + + + G V ++N DDA +E LN + +L + A++ Sbjct: 401 KVNNAELRYDSKGAPTGIAVVEYDNVDDADVCIERLNNYNYGGCDLDISYAKR 453
>Q9Y4C8:RBM19_HUMAN Probable RNA-binding protein 19 - Homo sapiens (Human)| Length = 960 Score = 74.3 bits (181), Expect = 2e-12 Identities = 81/348 (23%), Positives = 152/348 (43%), Gaps = 6/348 (1%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 + V +L A+L + F + GS+ V + T A V F P +A +A L Sbjct: 589 ILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGTT------AIVEFLEPLEARKAFRHL 642 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 ++ + P+ + ++ P S AA K L DT S + T Sbjct: 643 AYSKFHHVPLYLEWA---PVGVFSSAAP----------QKKKLQDTPSEPMEKDPAEPET 689 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNV 832 GE+ +++ + + A N M +++ ++E E++ G + Sbjct: 690 VPDGETPE------DENPTEEGADNSSAKMEEEEEE-------EEEEEESLPGC----TL 732 Query: 833 YVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGK----SRCFGFVNFENPDDAVHAVE 1000 ++KNL+ TTE+ LKE+F G + S + + + S FGFV + P+ A A++ Sbjct: 733 FIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALK 792 Query: 1001 DLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDE 1180 L G D +L V +++ ++ + L + K+T + + ++N+ E Sbjct: 793 QLQGHVVDGHKLEVRISERATKPAVTLARKKQVPRKQTTSK-----ILVRNIPFQAHSRE 847 Query: 1181 KLKELFAEFGTITSCKVMRD--SNGVNKGSGFVAFKSSEDATRALVAM 1318 ++ELF+ FG + + ++ + G ++G GFV F + +DA RA A+ Sbjct: 848 -IRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFNAL 894 Score = 73.2 bits (178), Expect = 5e-12 Identities = 96/424 (22%), Positives = 168/424 (39%), Gaps = 65/424 (15%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L+V +L + + L +FS+ G + + D T+ G+A++ F P A +A + Sbjct: 404 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEV 463 Query: 473 NFTPVNGKPIRIMYSN-RDPSSRKSGAANIFIKNLDKSIDNKAL------YDTFSAFGNI 631 + G+ + ++ S + +S + A K +KA ++T N Sbjct: 464 DGQVFQGRMLHVLPSTIKKEASEDASALGSSSYKKKKEAQDKANSASSHNWNTLFMGPNA 523 Query: 632 LSCKVATEMSG--------ESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRK 787 ++ +A + + E+KG V+ E+ + E+ L+ D V + F + Sbjct: 524 VADAIAQKYNATKSQVFDHETKGSVAVRVALGET--QLVQEVRRFLI-DNGVSLDSFSQA 580 Query: 788 Q-ERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVN 964 ER + VKNL T L+E FG FG + V++ + G + V Sbjct: 581 AAERSKTV-------ILVKNLPAGTLAAELQETFGRFGSLGRVLL--PEGGTT---AIVE 628 Query: 965 FENPDDAVHAVEDLNGKKFDDKELYVGRA----------QKK------------------ 1060 F P +A A L KF LY+ A QKK Sbjct: 629 FLEPLEARKAFRHLAYSKFHHVPLYLEWAPVGVFSSAAPQKKKLQDTPSEPMEKDPAEPE 688 Query: 1061 -----------------SEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLK 1189 ++ E E+ +E + G L++KNL+ + EKLK Sbjct: 689 TVPDGETPEDENPTEEGADNSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTE-EKLK 747 Query: 1190 ELFAEFGTITSCKVMRDSNG----VNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVA 1357 E+F++ GT+ SC + + N ++ G GFV ++ E A +AL + G +V L V Sbjct: 748 EVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVR 807 Query: 1358 LAQR 1369 +++R Sbjct: 808 ISER 811 Score = 56.2 bits (134), Expect = 6e-07 Identities = 43/188 (22%), Positives = 82/188 (43%), Gaps = 24/188 (12%) Frame = +2 Query: 632 LSCKVATEMSGESKGYGFVQYEQDESAQNAIN--------------------ELNGMLLN 751 ++ ++ G GY FV + +E + A+ G N Sbjct: 320 VAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGRYIEVFREKNVPTTKGAPKN 379 Query: 752 DKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSV-IVVRA 928 K + G + + E E ++V+NL ++TE++L++LF +GP++ + + + Sbjct: 380 TTKSWQGRILGENEEEEDLAES--GRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDS 437 Query: 929 DDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRA---QKKSEREMQLKESFEK 1099 K + F F+ F P+ AV A +++G+ F + L+V + ++ SE L S K Sbjct: 438 LTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHVLPSTIKKEASEDASALGSSSYK 497 Query: 1100 SNKETADR 1123 KE D+ Sbjct: 498 KKKEAQDK 505 Score = 47.4 bits (111), Expect = 3e-04 Identities = 24/74 (32%), Positives = 41/74 (55%) Frame = +2 Query: 1133 TNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALV 1312 + L +KNL + + E+ ++LFA FGT+T C + +G + GF+ FKS E+A +A Sbjct: 2 SRLIVKNLPNGMKE-ERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQK 60 Query: 1313 AMNGKMVGSKPLYV 1354 N + + + V Sbjct: 61 HFNKSFIDTSRITV 74 Score = 46.2 bits (108), Expect = 6e-04 Identities = 23/73 (31%), Positives = 37/73 (50%) Frame = +2 Query: 824 NNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVED 1003 + + VKNL E+ ++LF FG +T + DGK R FGF+ F++ ++A A + Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQKH 61 Query: 1004 LNGKKFDDKELYV 1042 N D + V Sbjct: 62 FNKSFIDTSRITV 74 Score = 43.1 bits (100), Expect = 0.005 Identities = 17/73 (23%), Positives = 36/73 (49%) Frame = +2 Query: 551 ANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINE 730 + + +KNL + + F+AFG + C + G+ + +GF+ ++ +E AQ A Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQKH 61 Query: 731 LNGMLLNDKKVYV 769 N ++ ++ V Sbjct: 62 FNKSFIDTSRITV 74
>P49960:PRP24_YEAST U4/U6 snRNA-associated-splicing factor PRP24 - Saccharomyces| cerevisiae (Baker's yeast) Length = 444 Score = 73.9 bits (180), Expect = 3e-12 Identities = 61/283 (21%), Positives = 125/283 (44%), Gaps = 3/283 (1%) Frame = +2 Query: 533 SRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESA 712 +R + +KNL KS + +Y F G I+ VA + + + +++ + + A Sbjct: 35 TRNRELTTVLVKNLPKSYNQNKVYKYFKHCGPIIHVDVADSLKKNFR-FARIEFARYDGA 93 Query: 713 QNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGN 892 AI + + ++ + E + +++ N S T+ N+++L + Sbjct: 94 LAAITKTHKVV--------------GQNEIIVSHLTECTLWMTNFPPSYTQRNIRDLLQD 139 Query: 893 FGPIT-SVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSER 1069 + S+ + SR F +++ + +DA + VE LNG K + L Sbjct: 140 INVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVT--------- 190 Query: 1070 EMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVM--RDS 1243 ++ EKS + + +G + ++NL + D+ L+E F FG+I + + Sbjct: 191 --KVSNPLEKSKRTDSATLEGREIMIRNLSTELLDENLLRESFEGFGSIEKINIPAGQKE 248 Query: 1244 NGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRK 1372 + N F+ F++ + A RAL MN ++G++ + V+LA +K Sbjct: 249 HSFNNCCAFMVFENKDSAERAL-QMNRSLLGNREISVSLADKK 290
>Q6CQR6:MRD1_KLULA Multiple RNA-binding domain-containing protein 1 - Kluyveromyces| lactis (Yeast) (Candida sphaerica) Length = 878 Score = 73.9 bits (180), Expect = 3e-12 Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 11/207 (5%) Frame = +2 Query: 524 DPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGE------SKGYGF 685 D + +IFIKNL+ S ++ L + F F + +V T+ + S G+GF Sbjct: 642 DDDVQAGPTVSIFIKNLNFSTTSQQLTEKFKPFNGFVVAQVKTKPDPKQPGKTLSMGFGF 701 Query: 686 VQYEQDESAQNAINELNGMLLNDKKVYVGPFVRK-QERENVFGSPKFNN---VYVKNLSE 853 +++ E A I+ + G +L+ K+ + R+ N K N + VKNL Sbjct: 702 AEFKTKEQANAVISAMEGTILDGHKLQLKLSHRQGTSTTNASSKKKKKNQGKIIVKNLPF 761 Query: 854 STTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKE 1033 T ++ ELF +FG + SV V + D +R F FV F P +A +A++ L G + Sbjct: 762 EATRKDVFELFSSFGQLKSVRVPKKFDKSARGFAFVEFLLPKEAENAMDQLQGVHLLGRR 821 Query: 1034 LYVGRAQKKSER-EMQLKESFEKSNKE 1111 L + ++ E E Q+++ K K+ Sbjct: 822 LVMEFVEQDPEDVEQQIEKMTRKVKKQ 848 Score = 64.7 bits (156), Expect = 2e-09 Identities = 43/184 (23%), Positives = 92/184 (50%), Gaps = 13/184 (7%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTR-----MSLGYAYVNFSSPADAAR 457 +++ +L+ S QL + F V +V + + +S+G+ + F + A Sbjct: 653 IFIKNLNFSTTSQQLTEKFKPFNGFVVAQVKTKPDPKQPGKTLSMGFGFAEFKTKEQANA 712 Query: 458 ALEMLNFTPVNGKPIRIMYSNRDPSS--------RKSGAANIFIKNLDKSIDNKALYDTF 613 + + T ++G +++ S+R +S +K I +KNL K +++ F Sbjct: 713 VISAMEGTILDGHKLQLKLSHRQGTSTTNASSKKKKKNQGKIIVKNLPFEATRKDVFELF 772 Query: 614 SAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQE 793 S+FG + S +V + ++G+ FV++ + A+NA+++L G+ L +++ V FV +Q+ Sbjct: 773 SSFGQLKSVRVPKKFDKSARGFAFVEFLLPKEAENAMDQLQGVHLLGRRL-VMEFV-EQD 830 Query: 794 RENV 805 E+V Sbjct: 831 PEDV 834 Score = 55.1 bits (131), Expect = 1e-06 Identities = 83/397 (20%), Positives = 159/397 (40%), Gaps = 54/397 (13%) Frame = +2 Query: 344 VFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEMLNFTPVNGKPIRIMYSNR 523 +FS G + V + D T S G+AYV F + +AA A L+ G+ + I+ ++ Sbjct: 349 LFSPYGELEEVHIAVDTRTGQSKGFAYVLFKNADNAATAFVELDKQIFQGRLLHILPAD- 407 Query: 524 DPSSRKSGAANIF-IKNL----DKSIDNKA--LYDTFSAFGNILSCKVATEMSGESKGYG 682 ++KS + F +KNL + + KA TFS ++ + G Sbjct: 408 ---AKKSHKLDEFDLKNLPLKKQRELKRKANSAQQTFSWNSLYMNQDAVLSSVADKLGMK 464 Query: 683 FVQYEQDESAQNAINEL--NGMLLND-KKVYVGPFVRKQERENVFGSPKFNNVY-VKNLS 850 + E++ +A+ + ++ D +K + V + + S + + V VKN Sbjct: 465 KSELIDAENSSSAVKQALAEASVIGDVRKFFETRGVDLTKFAQLKNSERDDRVILVKNFP 524 Query: 851 ESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDK 1030 TT + + ELF FG + +++ S + F + A A ++ K+F D Sbjct: 525 YGTTREEIAELFLPFGKLQRLLLP-----PSGTIAILQFRDVPAARAAFSKISYKRFKDG 579 Query: 1031 ELYVGRA---------------------QKKSEREMQLK-------ESFEKSNKETADRN 1126 +Y+ + QK + +E ++ +S ++K+ D + Sbjct: 580 IIYLEKGPSDCFTRDAQGDELVESETDIQKATAKEAKISGADLLEAQSLPAADKDDHDDD 639 Query: 1127 QG---------TNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVM------RDSNGVNKG 1261 ++++KNL+ S ++L E F F +V + ++ G Sbjct: 640 DDDDDVQAGPTVSIFIKNLNFSTTS-QQLTEKFKPFNGFVVAQVKTKPDPKQPGKTLSMG 698 Query: 1262 SGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRK 1372 GF FK+ E A + AM G ++ L + L+ R+ Sbjct: 699 FGFAEFKTKEQANAVISAMEGTILDGHKLQLKLSHRQ 735 Score = 52.4 bits (124), Expect = 8e-06 Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 6/190 (3%) Frame = +2 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGK------SRCFGFVNFENPDDAV 988 ++++KNL+ STT L E F F V D K S FGF F+ + A Sbjct: 652 SIFIKNLNFSTTSQQLTEKFKPFNGFVVAQVKTKPDPKQPGKTLSMGFGFAEFKTKEQAN 711 Query: 989 HAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSV 1168 + + G D +L + K S R+ S ++ + +NQG + +KNL Sbjct: 712 AVISAMEGTILDGHKLQL----KLSHRQ---GTSTTNASSKKKKKNQG-KIIVKNLPFEA 763 Query: 1169 DDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPL 1348 + ELF+ FG + S +V + + +G FV F ++A A+ + G + + L Sbjct: 764 TRKDVF-ELFSSFGQLKSVRVPKKFDKSARGFAFVEFLLPKEAENAMDQLQGVHLLGRRL 822 Query: 1349 YVALAQRKEE 1378 + ++ E Sbjct: 823 VMEFVEQDPE 832 Score = 45.1 bits (105), Expect = 0.001 Identities = 31/147 (21%), Positives = 73/147 (49%), Gaps = 11/147 (7%) Frame = +2 Query: 977 DDAVHAVEDLNGKKF---DDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTN--- 1138 D+AV ++ L ++ D + V + Q++ + E Q E E + ++ + Sbjct: 268 DEAVSDLDWLKNRRVRIKDGADTPVSKQQQQPDTEQQQPEETEVETSQESEEEKSLKKIR 327 Query: 1139 ----LYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSN-GVNKGSGFVAFKSSEDATR 1303 L+L+N+ + +D+ ++LF+ +G + + D+ G +KG +V FK++++A Sbjct: 328 ETGRLFLRNILYTATEDD-FRKLFSPYGELEEVHIAVDTRTGQSKGFAYVLFKNADNAAT 386 Query: 1304 ALVAMNGKMVGSKPLYVALAQRKEERR 1384 A V ++ ++ + L++ A K+ + Sbjct: 387 AFVELDKQIFQGRLLHILPADAKKSHK 413 Score = 38.5 bits (88), Expect = 0.13 Identities = 49/213 (23%), Positives = 80/213 (37%), Gaps = 25/213 (11%) Frame = +2 Query: 824 NNVYVKNLSESTTEDNLKELFGNF-----------GPITSVIVVRADDGKSRCFGFVNFE 970 + V VK L ED L++L ++ V +++ DG+SR F F+ F Sbjct: 2 SRVIVKGLPIYLKEDRLRDLIEKRLTQKHQSTDVQSYLSDVKLMKNRDGESRRFAFIGFR 61 Query: 971 NPDDAVHAVEDLNGKKFDDKELYVGRAQK----------KSEREMQLKESFEKSNKETAD 1120 + +DA V NG D ++ V A+ + +R LK E+ AD Sbjct: 62 DEEDAFDCVNYFNGTFVDTSKIEVSMAKSFADPRVPQPMREKRREALKRLREREELLLAD 121 Query: 1121 RNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCK----VMRDSNGVNKGSGFVAFKSS 1288 + K S +D K ++ AE + M+ S+ V + K+ Sbjct: 122 KKDSQK---KQKSDSNNDGGKKHDIDAEIAKNKQLQEFINTMKPSSQVTSWETVQSSKTQ 178 Query: 1289 EDATRALVAMNGKMVGSKPLYVALAQRKEERRA 1387 + A G+M + L ALA + R A Sbjct: 179 GEDEEAADDEVGEMSSNPLLSQALALKGNSRDA 211 Score = 35.8 bits (81), Expect = 0.81 Identities = 47/227 (20%), Positives = 96/227 (42%), Gaps = 7/227 (3%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYEQDESAQNAINEL 733 +F++N+ + FS +G + +A + +G+SKG+ +V ++ ++A A EL Sbjct: 332 LFLRNILYTATEDDFRKLFSPYGELEEVHIAVDTRTGQSKGFAYVLFKNADNAATAFVEL 391 Query: 734 NGMLLNDKKVYVGPFVRKQERE----NVFGSPKFNNVYVKNLSESTTED-NLKELFGNFG 898 + + + +++ P K+ + ++ P +K + S + + L+ N Sbjct: 392 DKQIFQGRLLHILPADAKKSHKLDEFDLKNLPLKKQRELKRKANSAQQTFSWNSLYMNQD 451 Query: 899 PITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSE-REM 1075 + S + + KS ++ EN AV K+ + +G +K E R + Sbjct: 452 AVLSSVADKLGMKKSE---LIDAENSSSAV--------KQALAEASVIGDVRKFFETRGV 500 Query: 1076 QLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTI 1216 L + + N E DR + +KN +E + ELF FG + Sbjct: 501 DLTKFAQLKNSERDDR----VILVKNFPYGTTREE-IAELFLPFGKL 542
>Q94901:LARK_DROME RNA-binding protein lark - Drosophila melanogaster (Fruit fly)| Length = 352 Score = 73.6 bits (179), Expect = 4e-12 Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 2/169 (1%) Frame = +2 Query: 542 SGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNA 721 +G +FI NLD+ L F +G ++ C V K YGFV E ++ ++A Sbjct: 4 AGTFKLFIGNLDEKTQATELRALFEKYGTVVECDVV-------KNYGFVHMETEQQGRDA 56 Query: 722 INELNGMLLNDKKVYVGPFVRKQERENVFGSPK--FNNVYVKNLSESTTEDNLKELFGNF 895 I LNG LN+ F K E +P ++V NL++ T ++ELF + Sbjct: 57 IQNLNGYTLNE-------FAIKVEAAKSRRAPNTPTTKIFVGNLTDKTRAPEVRELFQKY 109 Query: 896 GPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYV 1042 G + +VR +GFV+ + D A+++LNG+ D + L V Sbjct: 110 GTVVECDIVRN-------YGFVHLDCVGDVQDAIKELNGRVVDGQPLKV 151 Score = 58.9 bits (141), Expect = 9e-08 Identities = 46/178 (25%), Positives = 79/178 (44%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLN 1009 +++ NL E T L+ LF +G + VV+ +GFV+ E A+++LN Sbjct: 9 LFIGNLDEKTQATELRALFEKYGTVVECDVVKN-------YGFVHMETEQQGRDAIQNLN 61 Query: 1010 GKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLK 1189 G ++ + V A KS R A T +++ NL E ++ Sbjct: 62 GYTLNEFAIKVEAA--KSRR---------------APNTPTTKIFVGNLTDKTRAPE-VR 103 Query: 1190 ELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALA 1363 ELF ++GT+ C ++R+ GFV D A+ +NG++V +PL V ++ Sbjct: 104 ELFQKYGTVVECDIVRN-------YGFVHLDCVGDVQDAIKELNGRVVDGQPLKVQVS 154 Score = 55.1 bits (131), Expect = 1e-06 Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 2/178 (1%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++G+LD Q +L +F + G+VV V ++ Y +V+ + A++ L Sbjct: 9 LFIGNLDEKTQATELRALFEKYGTVVECDVVKN--------YGFVHMETEQQGRDAIQNL 60 Query: 473 NFTPVNGKPIRI--MYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKV 646 N +N I++ S R P++ + IF+ NL + + F +G ++ C + Sbjct: 61 NGYTLNEFAIKVEAAKSRRAPNTPTT---KIFVGNLTDKTRAPEVRELFQKYGTVVECDI 117 Query: 647 ATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPK 820 + YGFV + Q+AI ELNG +++ + + V + + G P+ Sbjct: 118 V-------RNYGFVHLDCVGDVQDAIKELNGRVVDGQPLKVQVSTSRVRPKPGMGDPE 168
>O13845:RSD1_SCHPO RNA-binding protein rsd1 - Schizosaccharomyces pombe (Fission yeast)| Length = 604 Score = 73.2 bits (178), Expect = 5e-12 Identities = 54/222 (24%), Positives = 105/222 (47%), Gaps = 17/222 (7%) Frame = +2 Query: 530 SSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFVQYEQDE 706 S + +F+ L + ++ LYD F G + ++ + +SG SKG +V++ ++ Sbjct: 233 SEEERDRRTVFVSQLANRLTSRELYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEFCHED 292 Query: 707 SAQNAINELNGMLLNDKKVYVGPFVRKQEREN---------VFGSPKFNNVYVKNLSEST 859 S Q AI L+G L V V ++ R+ F+ + V N+ + Sbjct: 293 SVQAAI-ALSGKRLLGLPVIVQLTEAEKNRKAREAAELARAASAEIPFHRLCVSNIHFNL 351 Query: 860 TEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELY 1039 T++++K +F FG I V + R D +S+ FG++ + NP A +A+E +NG + + Sbjct: 352 TDEDVKAIFEPFGDIEFVHLQRDDQNRSKGFGYIQYRNPISARNALEKMNGFDLAGRNMR 411 Query: 1040 V--GRAQKKSEREMQLKESFEKS-----NKETADRNQGTNLY 1144 V G + +E + + F+++ + + RN G++ Y Sbjct: 412 VCLGNDKFTTETTSSMLKRFDETLARQERSQPSQRNGGSSTY 453 Score = 62.4 bits (150), Expect = 8e-09 Identities = 42/172 (24%), Positives = 80/172 (46%), Gaps = 13/172 (7%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 ++V L + +L+D F Q G V ++ RD + S G AYV F D+ +A L Sbjct: 242 VFVSQLANRLTSRELYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEFCH-EDSVQAAIAL 300 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAA-------------NIFIKNLDKSIDNKALYDTF 613 + + G P+ + + + + + AA + + N+ ++ ++ + F Sbjct: 301 SGKRLLGLPVIVQLTEAEKNRKAREAAELARAASAEIPFHRLCVSNIHFNLTDEDVKAIF 360 Query: 614 SAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYV 769 FG+I + + SKG+G++QY SA+NA+ ++NG L + + V Sbjct: 361 EPFGDIEFVHLQRDDQNRSKGFGYIQYRNPISARNALEKMNGFDLAGRNMRV 412 Score = 59.3 bits (142), Expect = 7e-08 Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 1/182 (0%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVHAVEDL 1006 V+V L+ T L + F GP+ +VR G+S+ +V F + +D+V A L Sbjct: 242 VFVSQLANRLTSRELYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEFCH-EDSVQAAIAL 300 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 +GK+ + V + +E+ + +E+ E + +A+ L + N+ ++ D++ + Sbjct: 301 SGKRLLGLPVIVQLTE--AEKNRKAREAAELARAASAEI-PFHRLCVSNIHFNLTDED-V 356 Query: 1187 KELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQ 1366 K +F FG I + RD +KG G++ +++ A AL MNG + + + V L Sbjct: 357 KAIFEPFGDIEFVHLQRDDQNRSKGFGYIQYRNPISARNALEKMNGFDLAGRNMRVCLGN 416 Query: 1367 RK 1372 K Sbjct: 417 DK 418 Score = 48.9 bits (115), Expect = 9e-05 Identities = 30/120 (25%), Positives = 63/120 (52%), Gaps = 1/120 (0%) Frame = +2 Query: 1055 KKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVM 1234 + ER+ E+S+K + + +++ L + E L + F + G + +++ Sbjct: 214 RSHERKRSRSRPRERSSKLSEEERDRRTVFVSQLANRLTSRE-LYDFFEQAGPVRDAQIV 272 Query: 1235 RDS-NGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRARLQAQFSQ 1411 RD +G +KG +V F ED+ +A +A++GK + P+ V L + ++ R+AR A+ ++ Sbjct: 273 RDKISGRSKGVAYVEF-CHEDSVQAAIALSGKRLLGLPVIVQLTEAEKNRKAREAAELAR 331
>Q43349:ROC2_ARATH 29 kDa ribonucleoprotein, chloroplast precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 342 Score = 72.8 bits (177), Expect = 6e-12 Identities = 63/263 (23%), Positives = 102/263 (38%), Gaps = 4/263 (1%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L+VG+L +V AQL +F G+V V V D T S G+ +V S+ A+ A + Sbjct: 101 LFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQF 160 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 N G+P+R+ P +S + +G+ + Sbjct: 161 NGYEFEGRPLRVNAGPPPPKREESFSRG----------------PRSGGYGSERGGGYGS 204 Query: 653 EMSGESKGYGFVQ---YEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKF 823 E G GYG + Y + G ++ G + GS Sbjct: 205 ERGG---GYGSERGGGYGSERGGGYGSQRSGGGYGGSQRSSYG-----SGSGSGSGSGSG 256 Query: 824 NNVYVKNLSESTTEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHAVE 1000 N +YV NLS + L+ LF G + ++ D G+S+ FGFV + + A+ Sbjct: 257 NRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAIN 316 Query: 1001 DLNGKKFDDKELYVGRAQKKSER 1069 LNG D +++ V A+ + R Sbjct: 317 SLNGADLDGRQIRVSEAEARPPR 339 Score = 50.8 bits (120), Expect = 2e-05 Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 1/101 (0%) Frame = +2 Query: 1082 KESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD-SNGVNK 1258 + S+ + + G LY+ NL VDD L+ LF E G + +V+ D +G +K Sbjct: 240 RSSYGSGSGSGSGSGSGNRLYVGNLSWGVDD-MALENLFNEQGKVVEARVIYDRDSGRSK 298 Query: 1259 GSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEER 1381 G GFV SS++ +A+ ++NG + + + V+ A+ + R Sbjct: 299 GFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPR 339 Score = 40.0 bits (92), Expect = 0.043 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 1/91 (1%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVHAVEDL 1006 ++V NLS + L +LF + G + V V+ G+SR FGFV + A + Sbjct: 101 LFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQF 160 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEK 1099 NG +F+ + L V +RE ESF + Sbjct: 161 NGYEFEGRPLRVNAGPPPPKRE----ESFSR 187 Score = 33.5 bits (75), Expect = 4.0 Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 1/73 (1%) Frame = +2 Query: 1139 LYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDS-NGVNKGSGFVAFKSSEDATRALVA 1315 L++ NL +VD + L +LF G + +V+ D G ++G GFV ++ + A Sbjct: 101 LFVGNLSFNVDSAQ-LAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159 Query: 1316 MNGKMVGSKPLYV 1354 NG +PL V Sbjct: 160 FNGYEFEGRPLRV 172
>Q7SG09:MRD1_NEUCR Multiple RNA-binding domain-containing protein 1 - Neurospora crassa| Length = 827 Score = 72.8 bits (177), Expect = 6e-12 Identities = 88/369 (23%), Positives = 156/369 (42%), Gaps = 41/369 (11%) Frame = +2 Query: 392 VNTRMS--LGYAYVNFSSPADAARAL-----------EMLNFTPVNGKPIRIMYSNRDPS 532 VNT M+ LG + P DA+ A+ E + NG I Sbjct: 429 VNTAMAERLGVSKAELLDPTDASAAVKQAVAETTVIQEAKQYFAANGVNIEAF------K 482 Query: 533 SRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESA 712 +++ G I +KN+ K+ + L F G +L +V SG F Q Q +A Sbjct: 483 TQQRGDTTILVKNI-KNTTIEELRTLFEEHGTVL--RVLMPPSGTIAIVQFAQPVQCRTA 539 Query: 713 --QNAINELNGMLLNDKKVYVGPF--------------VRKQ------ERENVFGSPKFN 826 + A + +L +K G F V+K ER++ + + Sbjct: 540 FARKAYSRFKDSVLFLEKGPKGLFTDNVAVPTDARPAGVQKPSVADLLERDDAEEQLETS 599 Query: 827 NVYVKNLSESTTEDNLKELFGNF-GPITSVIVVRADDGK-----SRCFGFVNFENPDDAV 988 +++V+NL+ STT L + F + G + + + + D K S FGFV F D A Sbjct: 600 SLFVRNLNFSTTSQGLTDAFKHLDGFVQAKVKTKTDPKKPGQVLSMGFGFVAFRTKDQAQ 659 Query: 989 HAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSV 1168 A++ ++G+ D ++ V K S R + E + + NQGT L +KNL V Sbjct: 660 AALKVMDGQVLDAHKISV----KASHRGLDAAEERRREDMAKKAANQGTKLVVKNLPFEV 715 Query: 1169 DDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPL 1348 E ++ LF+ +G + + ++ + N ++G F F ++++A A ++ + + L Sbjct: 716 TKKE-VRTLFSAYGKLVALRIPKKFNQSSRGFAFAEFSTAKEALNAFNSLKDTHILGRRL 774 Query: 1349 YVALAQRKE 1375 + AQ ++ Sbjct: 775 VIDFAQAED 783 Score = 68.6 bits (166), Expect = 1e-10 Identities = 60/239 (25%), Positives = 108/239 (45%), Gaps = 19/239 (7%) Frame = +2 Query: 521 RDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGE------SKGYG 682 RD + + +++F++NL+ S ++ L D F + KV T+ + S G+G Sbjct: 589 RDDAEEQLETSSLFVRNLNFSTTSQGLTDAFKHLDGFVQAKVKTKTDPKKPGQVLSMGFG 648 Query: 683 FVQYEQDESAQNAINELNGMLLNDKKVYVGPFVR----KQERENVFGSPKFNN----VYV 838 FV + + AQ A+ ++G +L+ K+ V R +ER + K N + V Sbjct: 649 FVAFRTKDQAQAALKVMDGQVLDAHKISVKASHRGLDAAEERRREDMAKKAANQGTKLVV 708 Query: 839 KNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKK 1018 KNL T+ ++ LF +G + ++ + + + SR F F F +A++A L Sbjct: 709 KNLPFEVTKKEVRTLFSAYGKLVALRIPKKFNQSSRGFAFAEFSTAKEALNAFNSLKDTH 768 Query: 1019 FDDKELYVGRAQKKS-EREMQL----KESFEKSNKETADRNQGTNLYLKNLDGSVDDDE 1180 + L + AQ + + E Q+ K++ + NK + GT K G D+DE Sbjct: 769 ILGRRLVIDFAQAEDIDPEDQIAAMEKKTRAQVNKVALQQLTGTG-RAKVTIGDNDEDE 826 Score = 55.8 bits (133), Expect = 8e-07 Identities = 38/164 (23%), Positives = 77/164 (46%), Gaps = 17/164 (10%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTR-----MSLGYAYVNFSSPADAAR 457 L+V +L+ S L D F + V +V + + +S+G+ +V F + A Sbjct: 601 LFVRNLNFSTTSQGLTDAFKHLDGFVQAKVKTKTDPKKPGQVLSMGFGFVAFRTKDQAQA 660 Query: 458 ALEMLNFTPVNGKPIRIMYSNRDPSSRKSG--------AAN----IFIKNLDKSIDNKAL 601 AL++++ ++ I + S+R + + AAN + +KNL + K + Sbjct: 661 ALKVMDGQVLDAHKISVKASHRGLDAAEERRREDMAKKAANQGTKLVVKNLPFEVTKKEV 720 Query: 602 YDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINEL 733 FSA+G +++ ++ + + S+G+ F ++ + A NA N L Sbjct: 721 RTLFSAYGKLVALRIPKKFNQSSRGFAFAEFSTAKEALNAFNSL 764 Score = 48.1 bits (113), Expect = 2e-04 Identities = 45/197 (22%), Positives = 77/197 (39%), Gaps = 27/197 (13%) Frame = +2 Query: 818 KFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAV 997 K + ++++NLS + TED+++E F FG + V V G S+ F + +E P A+ A Sbjct: 306 KTSRLFLRNLSYTVTEDDVREHFAKFGILVEVHVPLDSKGHSKGFAMIRYEKPASALAAF 365 Query: 998 EDLNGKKFDDKELYVGRAQKKSEREMQ---------LKESFEKSNKETADRNQGTNLYLK 1150 + +G F + +++ A K E ++ K+ + E A N Sbjct: 366 Q-TDGTVFQGRIVHILPAAAKRENKLDEFALSKLPLKKQQLLRKKAEAASSTFNWNSLFM 424 Query: 1151 NLDG------------------SVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVA 1276 + D D +K+ AE I K +NGVN A Sbjct: 425 SQDAVNTAMAERLGVSKAELLDPTDASAAVKQAVAETTVIQEAKQYFAANGVN----IEA 480 Query: 1277 FKSSEDATRALVAMNGK 1327 FK+ + ++ N K Sbjct: 481 FKTQQRGDTTILVKNIK 497 Score = 47.8 bits (112), Expect = 2e-04 Identities = 81/398 (20%), Positives = 160/398 (40%), Gaps = 34/398 (8%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++ +L +V + + + F++ G +V V V D S G+A + + PA A A + Sbjct: 310 LFLRNLSYTVTEDDVREHFAKFGILVEVHVPLDSKGH-SKGFAMIRYEKPASALAAFQT- 367 Query: 473 NFTPVNGKPIRIM--YSNRDPSSRKSGAANIFIKN---LDKSIDNKALYDTFSAFGNILS 637 + T G+ + I+ + R+ + + + +K L K + A TF+ +S Sbjct: 368 DGTVFQGRIVHILPAAAKRENKLDEFALSKLPLKKQQLLRKKAE--AASSTFNWNSLFMS 425 Query: 638 CKVATEMSGESKGYGFVQYEQDESAQNAINEL--NGMLLNDKKVYVGPFVRKQERENVFG 811 E G + A A+ + ++ + K Y F F Sbjct: 426 QDAVNTAMAERLGVSKAELLDPTDASAAVKQAVAETTVIQEAKQY---FAANGVNIEAFK 482 Query: 812 SPKFNN--VYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDA 985 + + + + VKN+ +T E+ L+ LF G + V++ S V F P Sbjct: 483 TQQRGDTTILVKNIKNTTIEE-LRTLFEEHGTVLRVLMP-----PSGTIAIVQFAQPVQC 536 Query: 986 VHAVEDLNGKKFDDKELYVGRAQK---------------KSEREMQLKESFEKSNKETAD 1120 A +F D L++ + K ++ + + E+ + E + Sbjct: 537 RTAFARKAYSRFKDSVLFLEKGPKGLFTDNVAVPTDARPAGVQKPSVADLLERDDAE--E 594 Query: 1121 RNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNG------VNKGSGFVAFK 1282 + + ++L+++NL+ S + L + F KV ++ ++ G GFVAF+ Sbjct: 595 QLETSSLFVRNLNFSTTS-QGLTDAFKHLDGFVQAKVKTKTDPKKPGQVLSMGFGFVAFR 653 Query: 1283 SSEDATRALVAMNGKMVGSKPLYVALAQR----KEERR 1384 + + A AL M+G+++ + + V + R EERR Sbjct: 654 TKDQAQAALKVMDGQVLDAHKISVKASHRGLDAAEERR 691 Score = 47.4 bits (111), Expect = 3e-04 Identities = 51/242 (21%), Positives = 97/242 (40%), Gaps = 8/242 (3%) Frame = +2 Query: 515 SNRDPSSRKS---GAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGF 685 S DP S S + +F++NL ++ + + F+ FG ++ V + G SKG+ Sbjct: 293 STHDPESAISLIEKTSRLFLRNLSYTVTEDDVREHFAKFGILVEVHVPLDSKGHSKGFAM 352 Query: 686 VQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERE-NVFGSPKF----NNVYVKNLS 850 ++YE+ SA A + +G + + V++ P K+E + + F K + K Sbjct: 353 IRYEKPASALAAF-QTDGTVFQGRIVHILPAAAKRENKLDEFALSKLPLKKQQLLRKKAE 411 Query: 851 ESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDK 1030 +++ N LF + + + + R K+ +P DA AV+ Sbjct: 412 AASSTFNWNSLFMSQDAVNTAMAERLGVSKAELL------DPTDASAAVKQA-------- 457 Query: 1031 ELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFG 1210 V E + + + T + +KN+ + E+L+ LF E G Sbjct: 458 ---VAETTVIQEAKQYFAANGVNIEAFKTQQRGDTTILVKNIKNTT--IEELRTLFEEHG 512 Query: 1211 TI 1216 T+ Sbjct: 513 TV 514 Score = 36.6 bits (83), Expect = 0.48 Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 1/102 (0%) Frame = +2 Query: 824 NNVYVKNLSESTTEDNLKELFGNFG-PITSVIVVRADDGKSRCFGFVNFENPDDAVHAVE 1000 + ++VKNL + TE ++ F G +T V ++ A R GFV +++ +DA AV+ Sbjct: 5 SRIFVKNLPPTITEAEFRKHFSAEGRQVTDVKLIPA-----RHIGFVGYKSAEDAARAVK 59 Query: 1001 DLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRN 1126 N + V A+ ++ + Q K + S+K+ +N Sbjct: 60 YFNRSFIRMSRISVDIAKPIADSKPQHKSPSKGSSKDADPKN 101 Score = 35.8 bits (81), Expect = 0.81 Identities = 22/78 (28%), Positives = 40/78 (51%) Frame = +2 Query: 1133 TNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALV 1312 + +++KNL ++ + E K AE +T K++ + GFV +KS+EDA RA+ Sbjct: 5 SRIFVKNLPPTITEAEFRKHFSAEGRQVTDVKLIPARH-----IGFVGYKSAEDAARAVK 59 Query: 1313 AMNGKMVGSKPLYVALAQ 1366 N + + V +A+ Sbjct: 60 YFNRSFIRMSRISVDIAK 77
>Q8R3C6:RBM19_MOUSE Probable RNA-binding protein 19 - Mus musculus (Mouse)| Length = 952 Score = 72.4 bits (176), Expect = 8e-12 Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 23/197 (11%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGE----SKGYGFVQYEQDESAQNAI 724 +FIKNL+ S + L FS G I SC ++ + + S G+GFV+Y++ E AQ A+ Sbjct: 724 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKAL 783 Query: 725 NELNGMLLNDKKVYV-------GPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKEL 883 +L G ++ K+ V P + ++ V + + V+N+ + ++EL Sbjct: 784 KQLQGHTVDGHKLEVRISERATKPALTSTRKKQVPKKQTTSKILVRNIPFQANQREIREL 843 Query: 884 FGNFGPITSVIVVR--ADDGKSRCFGFVNFENPDDAVHAVE------DLNGKK----FDD 1027 F FG + +V + + G R FGFV+F DA A L G++ + D Sbjct: 844 FSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLEWAD 903 Query: 1028 KELYVGRAQKKSEREMQ 1078 E+ V ++K+ R Q Sbjct: 904 SEVTVQTLRRKTARHFQ 920 Score = 71.2 bits (173), Expect = 2e-11 Identities = 50/185 (27%), Positives = 97/185 (52%), Gaps = 7/185 (3%) Frame = +2 Query: 785 KQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGK----SRCF 952 ++E E++ G +++KNL+ STTE+ LK +F G I S + + + S F Sbjct: 713 EEEEESIPGC----TLFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGF 768 Query: 953 GFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQG 1132 GFV ++ P+ A A++ L G D +L V +++ + K + + K+ + Q Sbjct: 769 GFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISERAT------KPALTSTRKKQVPKKQT 822 Query: 1133 TN-LYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD--SNGVNKGSGFVAFKSSEDATR 1303 T+ + ++N+ + E ++ELF+ FG + + ++ + G ++G GFV F + +DA + Sbjct: 823 TSKILVRNIPFQANQRE-IRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKK 881 Query: 1304 ALVAM 1318 A A+ Sbjct: 882 AFNAL 886 Score = 70.5 bits (171), Expect = 3e-11 Identities = 92/418 (22%), Positives = 166/418 (39%), Gaps = 59/418 (14%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L+V +L + + L +FS G + + D T+ G+A+V F P A +A + Sbjct: 402 LFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEV 461 Query: 473 NFTPVNGKPIRIMYSN-RDPSSRKSGAANIFIKNLDKSID-----NKALYDTFSAFGNIL 634 + G+ + ++ S + +S+++ A K +++D + ++T N + Sbjct: 462 DGQVFQGRMLHVLPSTIKKEASQEANAPGSSYKKKKEAMDKANSSSSHNWNTLFMGPNAV 521 Query: 635 SCKVATEMSG--------ESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQ 790 + +A + + E++G V+ E+ + E+ L+ D V + F + Sbjct: 522 ADAIAQKYNATKSQVFDHETRGSVAVRVALGET--QLVQEVRSFLI-DNGVCLDSFSQAA 578 Query: 791 -ERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNF 967 ER + KNL T ++E F FG + V++ + V F Sbjct: 579 AERSKTV-------ILAKNLPAGTLAAEIQETFSRFGSLGRVLL-----PEGGITAIVEF 626 Query: 968 ENPDDAVHAVEDLNGKKFDDKELYVGRA---------QKKSEREMQ-------------- 1078 P +A A L KF LY+ A QKK + Q Sbjct: 627 LEPLEARKAFRHLAYSKFHHVPLYLEWAPIGVFGAAPQKKDSQHEQPAEKAEVEQETVLD 686 Query: 1079 -----------------LKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEF 1207 ++E E+ +E + G L++KNL+ S +E LK +F++ Sbjct: 687 PEGEKASVEGAEASTGKMEEEEEEEEEEEEESIPGCTLFIKNLNFST-TEETLKGVFSKV 745 Query: 1208 GTITSCKVMRDSNG----VNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQR 1369 G I SC + + N ++ G GFV +K E A +AL + G V L V +++R Sbjct: 746 GAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISER 803 Score = 67.8 bits (164), Expect = 2e-10 Identities = 40/163 (24%), Positives = 80/163 (49%), Gaps = 16/163 (9%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTR---MSLGYAYVNFSSPADAARAL 463 L++ +L+ S + L VFS+VG++ S + + N +S+G+ +V + P A +AL Sbjct: 724 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKAL 783 Query: 464 EMLNFTPVNGKPIRIMYSNRDPSS-----------RKSGAANIFIKNLDKSIDNKALYDT 610 + L V+G + + S R +K + I ++N+ + + + + Sbjct: 784 KQLQGHTVDGHKLEVRISERATKPALTSTRKKQVPKKQTTSKILVRNIPFQANQREIREL 843 Query: 611 FSAFGNILSCKVATEMSGES--KGYGFVQYEQDESAQNAINEL 733 FS FG + + ++ +M+G +G+GFV + + A+ A N L Sbjct: 844 FSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNAL 886 Score = 55.1 bits (131), Expect = 1e-06 Identities = 43/188 (22%), Positives = 86/188 (45%), Gaps = 24/188 (12%) Frame = +2 Query: 632 LSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFG 811 ++ ++ G GY FV +E + A+ + N + + + V R+++ G Sbjct: 319 VAIRIVRNAHGNKTGYVFVDLSSEEEVKKAL-KCNRDYMGGRYIEV---FREKQAPTARG 374 Query: 812 SPKFNN---------------------VYVKNLSESTTEDNLKELFGNFGPITSV-IVVR 925 PK ++V+NLS +++E++L++LF +GP++ + + Sbjct: 375 PPKSTTPWQGRTLGENEEEEDLADSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPID 434 Query: 926 ADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYV--GRAQKKSEREMQLKESFEK 1099 + K + F FV F P+ AV A +++G+ F + L+V +K++ +E S K Sbjct: 435 SLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPSTIKKEASQEANAPGSSYK 494 Query: 1100 SNKETADR 1123 KE D+ Sbjct: 495 KKKEAMDK 502 Score = 50.4 bits (119), Expect = 3e-05 Identities = 47/221 (21%), Positives = 94/221 (42%), Gaps = 26/221 (11%) Frame = +2 Query: 368 VSVRVCRDVNTRMSLGYAYVNFSSPADAARALEMLNFTPVNGKPIRIMYSNRDPSSRK-- 541 V++R+ R+ + + GY +V+ SS + +AL+ N + G+ I + + P++R Sbjct: 319 VAIRIVRNAHGNKT-GYVFVDLSSEEEVKKALKC-NRDYMGGRYIEVFREKQAPTARGPP 376 Query: 542 --------------------SGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-M 658 + + +F++NL + + L FSA+G + + + Sbjct: 377 KSTTPWQGRTLGENEEEEDLADSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSL 436 Query: 659 SGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQE---RENVFGSPKFNN 829 + + KG+ FV + E A A E++G + + ++V P K+E N GS Sbjct: 437 TKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPSTIKKEASQEANAPGSSYKKK 496 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCF 952 + + S++ N LF + I + + KS+ F Sbjct: 497 KEAMDKANSSSSHNWNTLFMGPNAVADAIAQKYNATKSQVF 537 Score = 46.6 bits (109), Expect = 5e-04 Identities = 23/59 (38%), Positives = 36/59 (61%) Frame = +2 Query: 1133 TNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRAL 1309 + L +KNL + + E+ ++LFA FGT+T C + +G + GF+ FKS E+A AL Sbjct: 2 SRLIVKNLPNGMKE-ERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQAAL 59 Score = 45.4 bits (106), Expect = 0.001 Identities = 23/103 (22%), Positives = 48/103 (46%) Frame = +2 Query: 551 ANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINE 730 + + +KNL + + F+AFG + C + G+ + +GF+ ++ +E AQ A+N Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQAALNH 61 Query: 731 LNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSEST 859 + ++ ++ V E FG P + K+ +S+ Sbjct: 62 FHRSFIDTTRITV-------EFCKSFGDPSKPRAWSKHAQKSS 97 Score = 45.1 bits (105), Expect = 0.001 Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 18/149 (12%) Frame = +2 Query: 824 NNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVED 1003 + + VKNL E+ ++LF FG +T + DGK R FGF+ F++ ++A A+ Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQAALNH 61 Query: 1004 LNGKKFDDKELYV----------------GRAQKKSEREMQLKESFEKSNKETADRNQGT 1135 + D + V AQK S+ + ++S K+ + + Sbjct: 62 FHRSFIDTTRITVEFCKSFGDPSKPRAWSKHAQKSSQPKQPSQDSVPSDTKKDKKKKGPS 121 Query: 1136 NLYLKNLDGSVDDDEKLKE--LFAEFGTI 1216 +L EKLKE F EF +I Sbjct: 122 DL------------EKLKEDAKFQEFLSI 138
>Q99383:HRP1_YEAST Nuclear polyadenylated RNA-binding protein 4 - Saccharomyces| cerevisiae (Baker's yeast) Length = 534 Score = 71.6 bits (174), Expect = 1e-11 Identities = 72/269 (26%), Positives = 123/269 (45%), Gaps = 6/269 (2%) Frame = +2 Query: 515 SNRDPSSRKS-GAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQ 691 SN+D SS K G AN DK N+ DT + + + S G + Sbjct: 68 SNQDTSSSKQDGTAN------DKEGSNE---DTKNEKKQESATSANANANASSAGPSGLP 118 Query: 692 YEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDN 871 +EQ + + + + ++V K+ER S + +++ L+ TTEDN Sbjct: 119 WEQLQQTMSQFQQPSSQSPPQQQVTQ----TKEERSKADLSKESCKMFIGGLNWDTTEDN 174 Query: 872 LKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENP---DDAVHAVEDLNGKKFDDKELY 1039 L+E FG +G +T + +++ G+SR FGF++FE P D+ V L+GK D K Sbjct: 175 LREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKTQHILDGKVIDPK--- 231 Query: 1040 VGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTIT 1219 RA + E+ +K+ K +++ + V E +E F+++GTI Sbjct: 232 --RAIPRDEQ--------DKTGK----------IFVGGIGPDVRPKE-FEEFFSQWGTII 270 Query: 1220 SCKVMRDSN-GVNKGSGFVAFKSSEDATR 1303 ++M D + G ++G GFV + S++ R Sbjct: 271 DAQLMLDKDTGQSRGFGFVTYDSADAVDR 299 Score = 34.7 bits (78), Expect = 1.8 Identities = 21/84 (25%), Positives = 40/84 (47%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 ++VG + V+ + + FSQ G+++ ++ D +T S G+ +V + S ADA + Sbjct: 245 IFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDS-ADAVDRVCQN 303 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKS 544 F + I I + +KS Sbjct: 304 KFIDFKDRKIEIKRAEPRHMQQKS 327
>O43390:HNRPR_HUMAN Heterogeneous nuclear ribonucleoprotein R - Homo sapiens (Human)| Length = 633 Score = 71.6 bits (174), Expect = 1e-11 Identities = 60/280 (21%), Positives = 134/280 (47%), Gaps = 5/280 (1%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 ++VG + + + +L +F + G + +R+ D + + GYA++ F A A+++ Sbjct: 167 VFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKLC 226 Query: 473 NFTPVN-GKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVA 649 + + GK + + S + +F+ ++ K+ + + + FS L + Sbjct: 227 DSYEIRPGKHLGVCISVANN--------RLFVGSIPKNKTKENILEEFSKVTEGLVDVIL 278 Query: 650 TEMSGESK---GYGFVQYEQDESAQNAINEL-NGMLLNDKKVYVGPFVRKQERENVFGSP 817 + K G+ F++YE +SA A L +G + V + E + Sbjct: 279 YHQPDDKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMA 338 Query: 818 KFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAV 997 K ++V+NL+ + TE+ L++ F FG + V K + + FV+FE+ AV A+ Sbjct: 339 KVKVLFVRNLATTVTEEILEKSFSEFGKLERV-------KKLKDYAFVHFEDRGAAVKAM 391 Query: 998 EDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETA 1117 +++NGK+ + +E+ + A K +++ + +++ ++++ TA Sbjct: 392 DEMNGKEIEGEEIEIVLA-KPPDKKRKERQAARQASRSTA 430
>Q04836:ROC3_ARATH 31 kDa ribonucleoprotein, chloroplast precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 329 Score = 71.2 bits (173), Expect = 2e-11 Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 5/190 (2%) Frame = +2 Query: 515 SNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVA-TEMSGESKGYGFVQ 691 S R S A +F+ NL ++++AL F G + +V + +S+G+GFV Sbjct: 138 SERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVT 197 Query: 692 YEQDESAQNAINELNGMLLNDKKVYVG---PFVRKQERENVFGSPKFNNVYVKNLSESTT 862 + A+ A+ + N LN + + V P + ER P F VYV NL Sbjct: 198 MSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFR-VYVGNLPWDVD 256 Query: 863 EDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELY 1039 L++LF G + +V + G+SR FGFV + D+ A+ L+G+ + + + Sbjct: 257 NGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIR 316 Query: 1040 VGRAQKKSER 1069 V A+++ R Sbjct: 317 VNVAEERPPR 326 Score = 69.3 bits (168), Expect = 7e-11 Identities = 48/187 (25%), Positives = 91/187 (48%), Gaps = 2/187 (1%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPIT-SVIVVRADDGKSRCFGFVNFENPDDAVHAVEDL 1006 ++V NL+ L LF G + + ++ + +SR FGFV + D+A AVE Sbjct: 152 LFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKF 211 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 N + + L V +A + R + +E + + +Y+ NL VD+ +L Sbjct: 212 NRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFR----------VYVGNLPWDVDNG-RL 260 Query: 1187 KELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALA 1363 ++LF+E G + +V+ D G ++G GFV ++ A+ A++G+ + + + V +A Sbjct: 261 EQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVA 320 Query: 1364 QRKEERR 1384 + + RR Sbjct: 321 EERPPRR 327 Score = 46.2 bits (108), Expect = 6e-04 Identities = 26/82 (31%), Positives = 41/82 (50%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 +YVG+L V + +L +FS+ G VV RV D T S G+ +V S + A+ L Sbjct: 246 VYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISAL 305 Query: 473 NFTPVNGKPIRIMYSNRDPSSR 538 + + G+ IR+ + P R Sbjct: 306 DGQNLEGRAIRVNVAEERPPRR 327
>Q4PC17:MRD1_USTMA Multiple RNA-binding domain-containing protein 1 - Ustilago maydis| (Smut fungus) Length = 858 Score = 70.9 bits (172), Expect = 2e-11 Identities = 86/404 (21%), Positives = 154/404 (38%), Gaps = 42/404 (10%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALE-- 466 L++ +L + ++ F G+V V + D T+ S G A+V+FS PA A A Sbjct: 316 LFIRNLPFAASGDEILAFFESFGTVKQVHIPLDKQTKASKGLAFVSFSDPAHALAAYRAK 375 Query: 467 --------MLNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAF 622 +L+ P K ++ ++ K A ++ K + LY + A Sbjct: 376 DGSTFQGRLLHLLPAVNKDALAETGSKKTATLKQARAEQKKQDATKDFNWSMLYMSSDAV 435 Query: 623 GNILSCKVATEMSGESKGYGFVQYEQDESAQNAINEL----NGMLLNDKKVYVGPFVRKQ 790 + ++ ++ S + + A NA L ++ K+ + Sbjct: 436 ASSIADRLGVNKSD------ILNPGANGGADNAAVRLALAETRIIQETKEFLAQQGINVD 489 Query: 791 ERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFE 970 + G + VKN+ T+ + +++LFG G + V++ S V Sbjct: 490 AFQGAKGPRSDTTILVKNIPYGTSAEEVEKLFGEHGEVDKVLIP-----PSGTIAVVEMP 544 Query: 971 NPDDAVHAVEDLNGKKFDDKELYVGRA-----------QKKSEREMQLKESFEKSNKETA 1117 ++A A + K+F LY+ +A +K ++ + +S + SN Sbjct: 545 VVNEARLAFRAIAYKRFKGGILYLEKAPVGLLTQHKVGEKVVKQAPIVGKSIDSSNPSVD 604 Query: 1118 -----------DRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVM------RDSN 1246 + G LY+KNL S D E+L F ++ R Sbjct: 605 LDGPAGAGAGDEAVDGATLYVKNLSFSTTD-ERLTAFFHGLSDFAFARIQTKPDPRRPGA 663 Query: 1247 GVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEE 1378 ++ G GFV FKS + A A AM+GK++ + L V A+R E Sbjct: 664 RLSMGYGFVGFKSIDAARTAQKAMDGKVLDAHTLVVTFARRNAE 707 Score = 60.8 bits (146), Expect = 2e-08 Identities = 46/194 (23%), Positives = 87/194 (44%), Gaps = 8/194 (4%) Frame = +2 Query: 551 ANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGE------SKGYGFVQYEQDESA 712 A +++KNL S ++ L F + ++ T+ S GYGFV ++ ++A Sbjct: 621 ATLYVKNLSFSTTDERLTAFFHGLSDFAFARIQTKPDPRRPGARLSMGYGFVGFKSIDAA 680 Query: 713 QNAINELNGMLLNDKKVYVGPFVRKQERENV--FGSPKFNNVYVKNLSESTTEDNLKELF 886 + A ++G +L D V F R+ + S + +KNL T+ ++++LF Sbjct: 681 RTAQKAMDGKVL-DAHTLVVTFARRNAEASTTSISSGGSTKILIKNLPFEATKRDIRDLF 739 Query: 887 GNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSE 1066 + G + SV + + D +R FGFV + +A A+E L + L + + S Sbjct: 740 SSQGQLKSVRLPKKFDNTTRGFGFVEYSTVREAQSAMEALKHTHLLGRHLVLQWSHLASS 799 Query: 1067 REMQLKESFEKSNK 1108 + Q+ K+ + Sbjct: 800 TQQQVDMQRSKTKQ 813 Score = 60.8 bits (146), Expect = 2e-08 Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 10/157 (6%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVC-----RDVNTRMSLGYAYVNFSSPADAAR 457 LYV +L S D +L F + R+ R R+S+GY +V F S A Sbjct: 623 LYVKNLSFSTTDERLTAFFHGLSDFAFARIQTKPDPRRPGARLSMGYGFVGFKSIDAART 682 Query: 458 ALEMLNFTPVNGKPIRIMYSNRDP-----SSRKSGAANIFIKNLDKSIDNKALYDTFSAF 622 A + ++ ++ + + ++ R+ S G+ I IKNL + + D FS+ Sbjct: 683 AQKAMDGKVLDAHTLVVTFARRNAEASTTSISSGGSTKILIKNLPFEATKRDIRDLFSSQ 742 Query: 623 GNILSCKVATEMSGESKGYGFVQYEQDESAQNAINEL 733 G + S ++ + ++G+GFV+Y AQ+A+ L Sbjct: 743 GQLKSVRLPKKFDNTTRGFGFVEYSTVREAQSAMEAL 779 Score = 55.1 bits (131), Expect = 1e-06 Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 6/169 (3%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGK------SRCFGFVNFENPDDAVH 991 +YVKNLS STT++ L F + D + S +GFV F++ D A Sbjct: 623 LYVKNLSFSTTDERLTAFFHGLSDFAFARIQTKPDPRRPGARLSMGYGFVGFKSIDAART 682 Query: 992 AVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVD 1171 A + ++GK D L V A++ +E ++ + T + +KNL Sbjct: 683 AQKAMDGKVLDAHTLVVTFARRNAE-----------ASTTSISSGGSTKILIKNLPFEAT 731 Query: 1172 DDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAM 1318 + +++LF+ G + S ++ + + +G GFV + + +A A+ A+ Sbjct: 732 KRD-IRDLFSSQGQLKSVRLPKKFDNTTRGFGFVEYSTVREAQSAMEAL 779
>P53316:YG5B_YEAST Uncharacterized RNA-binding protein YGR250C - Saccharomyces| cerevisiae (Baker's yeast) Length = 781 Score = 70.5 bits (171), Expect = 3e-11 Identities = 63/260 (24%), Positives = 104/260 (40%), Gaps = 1/260 (0%) Frame = +2 Query: 554 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMS-GESKGYGFVQYEQDESAQNAINE 730 NIF+ + KS+ L FS +G ILS K+ + + GE GYGF+ Y A I E Sbjct: 196 NIFVGGIAKSLSIGELSFLFSKYGPILSMKLIYDKTKGEPNGYGFISYPLGSQASLCIKE 255 Query: 731 LNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITS 910 LNG +N +++ V ++ERE ++ ++ E+ +DN + LF P + Sbjct: 256 LNGRTVNGSTLFINYHVERKERE---------RIHWDHVKENNNDDNFRCLFIGNLPYHN 306 Query: 911 VIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKES 1090 V P + + ++ KKF D ++ K+S S Sbjct: 307 PEKVE------------TLITPKEVIEVIKKELSKKFPDFDIISYYFPKRSNTRSSSSVS 354 Query: 1091 FEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGF 1270 F + + + N+ +N N +G+ D++ L KG GF Sbjct: 355 FNEEG--SVESNKSSN----NTNGNAQDEDML-----------------------KGYGF 385 Query: 1271 VAFKSSEDATRALVAMNGKM 1330 + + E A A+ NG M Sbjct: 386 IKLINHEQALAAIETFNGFM 405 Score = 58.9 bits (141), Expect = 9e-08 Identities = 94/444 (21%), Positives = 167/444 (37%), Gaps = 84/444 (18%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 ++VG + S+ +L +FS+ G ++S+++ D GY ++++ + A+ ++ L Sbjct: 197 IFVGGIAKSLSIGELSFLFSKYGPILSMKLIYDKTKGEPNGYGFISYPLGSQASLCIKEL 256 Query: 473 NFTPVNGKPIRIMY-----------------SNRDPSSRKSGAANIFIKNLDK------- 580 N VNG + I Y +N D + R N+ N +K Sbjct: 257 NGRTVNGSTLFINYHVERKERERIHWDHVKENNNDDNFRCLFIGNLPYHNPEKVETLITP 316 Query: 581 ----SIDNKALYDTFSAF------------------------GNILSCKVATEMSGES-- 670 + K L F F G++ S K + +G + Sbjct: 317 KEVIEVIKKELSKKFPDFDIISYYFPKRSNTRSSSSVSFNEEGSVESNKSSNNTNGNAQD 376 Query: 671 ----KGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYV 838 KGYGF++ E A AI NG + + ++ V V+ + N + ++ Sbjct: 377 EDMLKGYGFIKLINHEQALAAIETFNGFMWHGNRLVVNKAVQHKVYNNHNSHDRHPSISN 436 Query: 839 KNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKK 1018 N E N N +G S V + + + E ++ Sbjct: 437 HNDMEVLEFANNPMYDYNNYTYDRYYFNNNKNGNSNDTSNVRYFDSVRSTPVAEKMDLFY 496 Query: 1019 FDDKELYVGRAQK-----KSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEK 1183 + GR Q+ ++ +M S S Q +NLY+K++ S DE Sbjct: 497 PQRESFSEGRGQRVPRFMGNKFDMYQYPSTSYSLPIPMSNQQESNLYVKHIPLSW-TDED 555 Query: 1184 LKELFAEFGTITSCKVM----------RDSN----------GVNKGSGFVAFKSSEDATR 1303 L + + FG I S KV+ + SN G ++G GFV+F+S DA + Sbjct: 556 LYDFYKSFGEIISVKVITVGGSKNKYRQQSNDSSSDNDLPVGSSRGYGFVSFESPLDAAK 615 Query: 1304 ALVAMNGKMVG-SKPLYVALAQRK 1372 A++ +G V + L V+ AQ++ Sbjct: 616 AILNTDGYQVSKDQVLSVSFAQKR 639 Score = 47.8 bits (112), Expect = 2e-04 Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 21/131 (16%) Frame = +2 Query: 824 NNVYVKNLSESTTEDNLKELFGNFGPITSVIVV-----------RADD---------GKS 943 +N+YVK++ S T+++L + + +FG I SV V+ +++D G S Sbjct: 540 SNLYVKHIPLSWTDEDLYDFYKSFGEIISVKVITVGGSKNKYRQQSNDSSSDNDLPVGSS 599 Query: 944 RCFGFVNFENPDDAVHAVEDLNGKKFD-DKELYVGRAQKKSEREMQLKESFEKSNKETAD 1120 R +GFV+FE+P DA A+ + +G + D+ L V AQK+ L S + +T + Sbjct: 600 RGYGFVSFESPLDAAKAILNTDGYQVSKDQVLSVSFAQKRG----NLSSSDDDDQSQTDN 655 Query: 1121 RNQGTNLYLKN 1153 ++ N N Sbjct: 656 SSKFQNFQPHN 666 Score = 45.4 bits (106), Expect = 0.001 Identities = 37/140 (26%), Positives = 59/140 (42%), Gaps = 29/140 (20%) Frame = +2 Query: 512 YSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMS---------- 661 YS P S + +N+++K++ S ++ LYD + +FG I+S KV T Sbjct: 528 YSLPIPMSNQQ-ESNLYVKHIPLSWTDEDLYDFYKSFGEIISVKVITVGGSKNKYRQQSN 586 Query: 662 ----------GESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQ------- 790 G S+GYGFV +E A AI +G ++ +V F +K+ Sbjct: 587 DSSSDNDLPVGSSRGYGFVSFESPLDAAKAILNTDGYQVSKDQVLSVSFAQKRGNLSSSD 646 Query: 791 --ERENVFGSPKFNNVYVKN 844 ++ S KF N N Sbjct: 647 DDDQSQTDNSSKFQNFQPHN 666 Score = 38.5 bits (88), Expect = 0.13 Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 2/85 (2%) Frame = +2 Query: 1136 NLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATRALV 1312 N+++ + S+ E L LF+++G I S K++ D + G G GF+++ A+ + Sbjct: 196 NIFVGGIAKSLSIGE-LSFLFSKYGPILSMKLIYDKTKGEPNGYGFISYPLGSQASLCIK 254 Query: 1313 AMNGKMVGSKPLYVAL-AQRKEERR 1384 +NG+ V L++ +RKE R Sbjct: 255 ELNGRTVNGSTLFINYHVERKERER 279
>Q8SX83:SPEN_DROME Protein split ends - Drosophila melanogaster (Fruit fly)| Length = 5560 Score = 70.1 bits (170), Expect = 4e-11 Identities = 75/297 (25%), Positives = 122/297 (41%), Gaps = 19/297 (6%) Frame = +2 Query: 311 DVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEM------- 469 D S++D LF + + G V V+V + R YA V F P D +ALE+ Sbjct: 567 DTSLKDG-LFHEYKKHGKVTWVKVVGQNSER----YALVCFKKPDDVEKALEVSHDKHFF 621 Query: 470 ---LNFTPVNG--------KPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFS 616 + P G +P P S ++ +FI NL+K I L F Sbjct: 622 GCKIEVEPYQGYDVEDNEFRPYEAELDEYHPKSTRT----LFIGNLEKDITAGELRSHFE 677 Query: 617 AFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQER 796 AFG I+ + + Y F QY S A+ +++G L ++ +G Sbjct: 678 AFGEIIEIDIKKQ---GLNAYAFCQYSDIVSVVKAMRKMDGEHLGSNRIKLG-------- 726 Query: 797 ENVFG-SPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFEN 973 FG S N V++ + E +E L+ F FG +T V + R +R V ++ Sbjct: 727 ---FGKSMPTNCVWIDGVDEKVSESFLQSQFTRFGAVTKVSIDR-----NRQLALVLYDQ 778 Query: 974 PDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLY 1144 +A AV+D+ G K+L V A ++ + K+ EK ++++ N + Y Sbjct: 779 VQNAQAAVKDMRGTILRRKKLQVDFASRECQDAFYDKQ--EKQQQQSSGSNPRFSRY 833
>Q86U06:RBM23_HUMAN Probable RNA-binding protein 23 - Homo sapiens (Human)| Length = 439 Score = 70.1 bits (170), Expect = 4e-11 Identities = 57/226 (25%), Positives = 103/226 (45%), Gaps = 7/226 (3%) Frame = +2 Query: 404 MSLGYAYVNFSSPADAARALEMLNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKS 583 ++ GY Y + SP ++ P+R N P R A +F L Sbjct: 131 LATGYRYGHSKSPHFREKS------------PVREPVDNLSPEERD--ARTVFCMQLAAR 176 Query: 584 IDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYEQDESAQNAINELNGMLLNDKK 760 I + L D FSA G + ++ ++ S SKG +V++ + +S AI LL Sbjct: 177 IRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPI 236 Query: 761 VYVGPFVRKQERENVFGSPKFNN-----VYVKNLSESTTEDNLKELFGNFGPITSVIVVR 925 + K + + + N +YV +L + TED L+ +F FG I ++++++ Sbjct: 237 IVQASQAEKNRLAAMANNLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMK 296 Query: 926 -ADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKK 1060 +D G+S+ +GF+ F + + A A+E LNG + + + VG ++ Sbjct: 297 DSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRVGHVTER 342 Score = 65.9 bits (159), Expect = 7e-10 Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 11/166 (6%) Frame = +2 Query: 308 LDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEMLNFTPV 487 L ++ L D FS VG V VR+ D N+R S G AYV F A+ + + Sbjct: 173 LAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTG-QRL 231 Query: 488 NGKPIRIMYSNRDPSSRKSGAANI----------FIKNLDKSIDNKALYDTFSAFGNILS 637 G PI + S + + + A N+ ++ +L +I L F FG I + Sbjct: 232 LGVPIIVQASQAEKNRLAAMANNLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDN 291 Query: 638 CKVATEM-SGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVG 772 + + +G SKGYGF+ + E A+ A+ +LNG L + + VG Sbjct: 292 IVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRVG 337 Score = 56.2 bits (134), Expect = 6e-07 Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 2/177 (1%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHAVEDL 1006 V+ L+ +L++ F G + V I+ + +S+ +V F A+ L Sbjct: 168 VFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI-GL 226 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 G++ + V +Q + R + + +K N LY+ +L ++ +D L Sbjct: 227 TGQRLLGVPIIVQASQAEKNRLAAMANNLQKGN------GGPMRLYVGSLHFNITED-ML 279 Query: 1187 KELFAEFGTITSCKVMRDSN-GVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYV 1354 + +F FG I + +M+DS+ G +KG GF+ F SE A RAL +NG + +P+ V Sbjct: 280 RGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 336 Score = 54.3 bits (129), Expect = 2e-06 Identities = 30/99 (30%), Positives = 52/99 (52%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LYVG L ++ + L +F G + ++ + +D +T S GY ++ FS A RALE L Sbjct: 265 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 324 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSID 589 N + G+P+R+ + + R G +I + D+ +D Sbjct: 325 NGFELAGRPMRVGH----VTERLDGGTDITFPDGDQELD 359
>Q8T6B9:PUF68_DROME Poly U-binding-splicing factor half pint - Drosophila melanogaster| (Fruit fly) Length = 637 Score = 70.1 bits (170), Expect = 4e-11 Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 10/170 (5%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 +YVG + +++ + F+ G + S+ + D T+ G+A+V + P A ALE + Sbjct: 132 VYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 191 Query: 473 NFTPVNGKPIRIMYSNRDPSSRK---------SGAANIFIKNLDKSIDNKALYDTFSAFG 625 N + G+ I++ + P +++ I++ ++ + + + F AFG Sbjct: 192 NGALMGGRNIKVGRPSNMPQAQQVIDEVQEEAKSFNRIYVASIHPDLSEEDIKSVFEAFG 251 Query: 626 NILSCKVATEMSGES-KGYGFVQYEQDESAQNAINELNGMLLNDKKVYVG 772 IL CK+A S + KGYGF++Y ++ AI +N L + + VG Sbjct: 252 PILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIASMNLFDLGGQLLRVG 301 Score = 67.4 bits (163), Expect = 3e-10 Identities = 43/175 (24%), Positives = 86/175 (49%), Gaps = 10/175 (5%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFVQYEQDESAQNAINEL 733 +++ ++ + + F+ FG I S ++ + ++ + KG+ FV+YE E AQ A+ ++ Sbjct: 132 VYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 191 Query: 734 NGMLLNDKKVYVGPFVRKQERENVFG-----SPKFNNVYVKNLSESTTEDNLKELFGNFG 898 NG L+ + + VG + + V + FN +YV ++ +E+++K +F FG Sbjct: 192 NGALMGGRNIKVGRPSNMPQAQQVIDEVQEEAKSFNRIYVASIHPDLSEEDIKSVFEAFG 251 Query: 899 PITSVIVVRADDGKS----RCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRA 1051 PI + + G S + +GF+ + N A+ +N + L VGR+ Sbjct: 252 PI---LYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIASMNLFDLGGQLLRVGRS 303 Score = 65.9 bits (159), Expect = 7e-10 Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 2/177 (1%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVHAVEDL 1006 VYV ++S ED ++ F FGPI S+ + K + F FV +E P+ A A+E + Sbjct: 132 VYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 191 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 NG + + VGR + + + E E++ +Y+ ++ + +E + Sbjct: 192 NGALMGGRNIKVGRPSNMPQAQQVIDEVQEEA-------KSFNRIYVASIHPDL-SEEDI 243 Query: 1187 KELFAEFGTITSCKVMRDSN-GVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYV 1354 K +F FG I CK+ + ++ +KG GF+ + + + A+ +MN +G + L V Sbjct: 244 KSVFEAFGPILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIASMNLFDLGGQLLRV 300
>Q15414:RBY1A_HUMAN RNA-binding motif protein, Y chromosome, family 1 member A1 - Homo| sapiens (Human) Length = 496 Score = 69.7 bits (169), Expect = 5e-11 Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 8/123 (6%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLN 1009 +++ L+ T E LK +FG GPI+ V++++ KSR F F+ FENP DA +A +D+N Sbjct: 10 LFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMN 69 Query: 1010 GKKFDDKELYVGRAQKKSERE--------MQLKESFEKSNKETADRNQGTNLYLKNLDGS 1165 GK K + V +A+K S + S S + GT +L + +G Sbjct: 70 GKSLHGKAIKVEQAKKPSFQSGGRRRPPASSRNRSPSGSLRSARGSRGGTRGWLPSHEGH 129 Query: 1166 VDD 1174 +DD Sbjct: 130 LDD 132 Score = 46.6 bits (109), Expect = 5e-04 Identities = 26/85 (30%), Positives = 47/85 (55%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++G L+ + L VF + G + V + +D T S G+A++ F +PADA A + + Sbjct: 10 LFIGGLNRETNEKMLKAVFGKHGPISEVLLIKD-RTSKSRGFAFITFENPADAKNAAKDM 68 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSG 547 N ++GK I++ + + PS + G Sbjct: 69 NGKSLHGKAIKVEQAKK-PSFQSGG 92 Score = 42.7 bits (99), Expect = 0.007 Identities = 20/71 (28%), Positives = 37/71 (52%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 +FI L++ + K L F G I + + + +S+G+ F+ +E A+NA ++N Sbjct: 10 LFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMN 69 Query: 737 GMLLNDKKVYV 769 G L+ K + V Sbjct: 70 GKSLHGKAIKV 80
>O13620:MRD1_SCHPO Multiple RNA-binding domain-containing protein 1 -| Schizosaccharomyces pombe (Fission yeast) Length = 833 Score = 69.7 bits (169), Expect = 5e-11 Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 11/198 (5%) Frame = +2 Query: 551 ANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGE------SKGYGFVQYEQDESA 712 A I++KNL+ S + F LS + + + S G+GFV+++ SA Sbjct: 619 ATIYVKNLNFSTKQEEFQKVFKPLEGYLSAVIRAKPDPKRPGKYLSMGFGFVEFKDKASA 678 Query: 713 QNAINELNGMLLNDKKVYV-----GPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLK 877 A++ +NG +L+ K+ + G + R+ PK + +KNL T+ +++ Sbjct: 679 VAAMHAMNGFVLDGHKLEIKLSHQGVDAAAEVRKQDSSKPKGTKILIKNLPFEATKKDVQ 738 Query: 878 ELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQK 1057 L G +G + SV V + D +R F F F +A +A+ L + L + A Sbjct: 739 SLLGAYGQLRSVRVPKKFDRSARGFAFAEFVTAREAANAMRALKNTHLLGRHLVLQYASN 798 Query: 1058 KSEREMQLKESFEKSNKE 1111 + +MQ + EK KE Sbjct: 799 ATMDDMQ--HAIEKMAKE 814 Score = 67.0 bits (162), Expect = 3e-10 Identities = 90/399 (22%), Positives = 152/399 (38%), Gaps = 27/399 (6%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++ +L S + L +F G + V + D T G+AY++F DA RA L Sbjct: 325 LFLRNLTYSCAEDDLKSLFGPFGQLEQVHMPIDKKTNNPKGFAYIDFHDADDAVRAYLEL 384 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFI---KNLDKSIDNKALYDTFSAFGNILSCK 643 + P G+ + ++ + S A + K + N A TFS ++ Sbjct: 385 DAKPFQGRLLHVLPAKARSSILLDDYALSKLPLKKQRELKRKNTAASSTFSWNSLYMNAD 444 Query: 644 -VATEMS---GESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFG 811 V T ++ G K D + + A+ E + ++ K + V +N Sbjct: 445 AVVTSLASRLGVKKTDILDPTSSDSAVKQALTETH-VIQETKNFFEEHGVDLDAFKNAAR 503 Query: 812 SPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVH 991 S N + VKN T+ + L LF FG + +++ A + F N D Sbjct: 504 SD--NVLLVKNFPYGTSAEELTSLFSPFGELGRILIPPAGT-----IAIIEFLNAPDCRQ 556 Query: 992 AVEDLNGKKFDDKELYVGRAQK-------KSEREMQLKESF--------EKSNKETADRN 1126 A L + LY+ +A + K + +L + EK E + Sbjct: 557 AFSKLAYTRIKSSILYLEKAPRDVFTTSFKQSGKPELAQKVNAVEATTSEKVGTEDIESL 616 Query: 1127 QGTNLYLKNLDGSVDDDE---KLKELFAEFGTITSCKV--MRDSNGVNKGSGFVAFKSSE 1291 +Y+KNL+ S +E K L + K R ++ G GFV FK Sbjct: 617 DTATIYVKNLNFSTKQEEFQKVFKPLEGYLSAVIRAKPDPKRPGKYLSMGFGFVEFKDKA 676 Query: 1292 DATRALVAMNGKMVGSKPLYVALAQRKEERRARLQAQFS 1408 A A+ AMNG ++ L + L+ + + A ++ Q S Sbjct: 677 SAVAAMHAMNGFVLDGHKLEIKLSHQGVDAAAEVRKQDS 715 Score = 57.0 bits (136), Expect = 3e-07 Identities = 40/169 (23%), Positives = 81/169 (47%), Gaps = 6/169 (3%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGK------SRCFGFVNFENPDDAVH 991 +YVKNL+ ST ++ +++F S ++ D K S FGFV F++ AV Sbjct: 621 IYVKNLNFSTKQEEFQKVFKPLEGYLSAVIRAKPDPKRPGKYLSMGFGFVEFKDKASAVA 680 Query: 992 AVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVD 1171 A+ +NG D +L + + + + +++ K+ + + +GT + +KNL Sbjct: 681 AMHAMNGFVLDGHKLEIKLSHQGVDAAAEVR-------KQDSSKPKGTKILIKNLPFEAT 733 Query: 1172 DDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAM 1318 + ++ L +G + S +V + + +G F F ++ +A A+ A+ Sbjct: 734 KKD-VQSLLGAYGQLRSVRVPKKFDRSARGFAFAEFVTAREAANAMRAL 781 Score = 56.6 bits (135), Expect = 4e-07 Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 29/210 (13%) Frame = +2 Query: 779 VRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSV-IVVRADDGKSRCFG 955 V +QER N+ + ++++NL+ S ED+LK LFG FG + V + + + F Sbjct: 309 VSEQER-NIQLISETKRLFLRNLTYSCAEDDLKSLFGPFGQLEQVHMPIDKKTNNPKGFA 367 Query: 956 FVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSE--------REMQLKESFEKSNKE 1111 +++F + DDAV A +L+ K F + L+V A+ +S ++ LK+ E K Sbjct: 368 YIDFHDADDAVRAYLELDAKPFQGRLLHVLPAKARSSILLDDYALSKLPLKKQRELKRKN 427 Query: 1112 TADRN--QGTNLYLKNLDGSV------------------DDDEKLKELFAEFGTITSCKV 1231 TA + +LY+ N D V D +K+ E I K Sbjct: 428 TAASSTFSWNSLYM-NADAVVTSLASRLGVKKTDILDPTSSDSAVKQALTETHVIQETKN 486 Query: 1232 MRDSNGVNKGSGFVAFKSSEDATRALVAMN 1321 + +GV+ AFK++ + L+ N Sbjct: 487 FFEEHGVD----LDAFKNAARSDNVLLVKN 512 Score = 53.5 bits (127), Expect = 4e-06 Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 14/161 (8%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTR-----MSLGYAYVNFSSPADAAR 457 +YV +L+ S + + VF + +S + + + +S+G+ +V F A A Sbjct: 621 IYVKNLNFSTKQEEFQKVFKPLEGYLSAVIRAKPDPKRPGKYLSMGFGFVEFKDKASAVA 680 Query: 458 ALEMLNFTPVNGKPIRIMYSN---------RDPSSRKSGAANIFIKNLDKSIDNKALYDT 610 A+ +N ++G + I S+ R S K I IKNL K + Sbjct: 681 AMHAMNGFVLDGHKLEIKLSHQGVDAAAEVRKQDSSKPKGTKILIKNLPFEATKKDVQSL 740 Query: 611 FSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINEL 733 A+G + S +V + ++G+ F ++ A NA+ L Sbjct: 741 LGAYGQLRSVRVPKKFDRSARGFAFAEFVTAREAANAMRAL 781 Score = 40.8 bits (94), Expect = 0.025 Identities = 35/136 (25%), Positives = 56/136 (41%), Gaps = 24/136 (17%) Frame = +2 Query: 824 NNVYVKNLSESTTEDNLKELFGNF----GPITSVIVVRADDGKSRCFGFVNFENPDDAVH 991 + + +KN+ ++ L + IT V V + +G SR F F+ F+N +DA Sbjct: 2 SRIIIKNIPRYYDKEKLSTYLKSLPQLDAEITDVSVAKTKEGVSRRFAFIGFKNEEDADK 61 Query: 992 AVEDLNGKKFDDKELYVGR-----------------AQKKSEREMQLKESFEK---SNKE 1111 A+ LN + + V R A K E ++Q KE E+ +E Sbjct: 62 AIRYLNKSYVETSRIEVHRALDYRSANEKLRPYSKYASKNIELKLQKKEKEEELRNLEEE 121 Query: 1112 TADRNQGTNLYLKNLD 1159 A + + NL K LD Sbjct: 122 KAKKKKDANLKRKFLD 137 Score = 34.3 bits (77), Expect = 2.4 Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 5/97 (5%) Frame = +2 Query: 1133 TNLYLKNLDGSVDDDEK---LKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATR 1303 + + +KN+ D ++ LK L IT V + GV++ F+ FK+ EDA + Sbjct: 2 SRIIIKNIPRYYDKEKLSTYLKSLPQLDAEITDVSVAKTKEGVSRRFAFIGFKNEEDADK 61 Query: 1304 ALVAMNGKMVGSKPLYV--ALAQRKEERRARLQAQFS 1408 A+ +N V + + V AL R + R ++++ Sbjct: 62 AIRYLNKSYVETSRIEVHRALDYRSANEKLRPYSKYA 98
>P19682:ROC3_NICSY 28 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 276 Score = 69.3 bits (168), Expect = 7e-11 Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 7/180 (3%) Frame = +2 Query: 551 ANIFIKNLDKSIDNKALYDTFSAFGNILSCKVA-TEMSGESKGYGFVQYEQDESAQNAIN 727 A +F+ NL ID++ L F G + +V + S+G+GFV E A A+ Sbjct: 97 AKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVE 156 Query: 728 -----ELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGN 892 +LNG LL K P + ER P + +YV N+ + L+++F Sbjct: 157 LYSQYDLNGRLLTVNKA--APRGSRPERAPRTFQPTYR-IYVGNIPWDIDDARLEQVFSE 213 Query: 893 FGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSER 1069 G + S +V + G+SR FGFV + + A+ +L+G+ D + + V A+++ R Sbjct: 214 HGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIRVNAAEERPRR 273 Score = 67.0 bits (162), Expect = 3e-10 Identities = 44/186 (23%), Positives = 92/186 (49%), Gaps = 2/186 (1%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPIT-SVIVVRADDGKSRCFGFVNFENPDDAVHAVEDL 1006 ++V NL + L +LF G + + ++ + +SR FGFV ++A AVE Sbjct: 99 LFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVELY 158 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 + + + L V +A + R + +F+ + + +Y+ N+ + DD +L Sbjct: 159 SQYDLNGRLLTVNKAAPRGSRPERAPRTFQPTYR----------IYVGNIPWDI-DDARL 207 Query: 1187 KELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALA 1363 +++F+E G + S +V+ D +G ++G GFV S + + A+ ++G+ + + + V A Sbjct: 208 EQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIRVNAA 267 Query: 1364 QRKEER 1381 + + R Sbjct: 268 EERPRR 273 Score = 53.5 bits (127), Expect = 4e-06 Identities = 28/79 (35%), Positives = 46/79 (58%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 +YVG++ + DA+L VFS+ G VVS RV D + S G+ +V SS A+ + A+ L Sbjct: 193 IYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANL 252 Query: 473 NFTPVNGKPIRIMYSNRDP 529 + ++G+ IR+ + P Sbjct: 253 DGQTLDGRTIRVNAAEERP 271
>Q00539:NAM8_YEAST Protein NAM8 - Saccharomyces cerevisiae (Baker's yeast)| Length = 523 Score = 69.3 bits (168), Expect = 7e-11 Identities = 74/320 (23%), Positives = 131/320 (40%), Gaps = 80/320 (25%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSV-VSVRVC----------RDVNTRMSLGYAYVNFSS 439 LY+GDLD + + +++ +G ++VR+ + + + GY +V+F S Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115 Query: 440 PADAARALEMLNFTPVN--GKPIRIMY-------SNRDPSSRKSGA-ANIFIKNLDKSID 589 AA AL N K +++ + SN ++ KSG +IF+ +L ++ Sbjct: 116 STHAANALLKNGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNVT 175 Query: 590 NKALYDTF-SAFGNILSCKVA-TEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKV 763 L++ F + + + K+ +++G SKGYGFV++ + Q A++E+ G+ LN + + Sbjct: 176 ESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRAI 235 Query: 764 YVGPFVRKQE----------------RENV------------------------------ 805 VGP +Q+ ENV Sbjct: 236 KVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMGFKRNHMSQFI 295 Query: 806 -----------FGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCF 952 F P V++ LS TED L+ F FG +++ V+ GK C Sbjct: 296 YPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFG---TIVYVKIPVGK--CC 350 Query: 953 GFVNFENPDDAVHAVEDLNG 1012 GFV + + A A+ + G Sbjct: 351 GFVQYVDRLSAEAAIAGMQG 370 Score = 38.1 bits (87), Expect = 0.16 Identities = 42/207 (20%), Positives = 88/207 (42%), Gaps = 18/207 (8%) Frame = +2 Query: 788 QERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVR----ADDGKSRCFG 955 Q NV N +Y+ +L + ++ +++++ + G + + ++G G Sbjct: 42 QGASNVSLGTTGNQLYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMG 101 Query: 956 --------FVNFENPDDAVHAVEDLNGK---KFDDKELYVGRAQKKSEREMQLKESFEKS 1102 FV+F + A +A+ NG F +K+L + A S+ S Sbjct: 102 PKNNQGYCFVDFPSSTHAANALLK-NGMLIPNFPNKKLKLNWATS----------SYSNS 150 Query: 1103 NKETADRNQGTN--LYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDS-NGVNKGSGFV 1273 N + G N +++ +L +V + + + + + + K++ D G++KG GFV Sbjct: 151 NNSLNNVKSGNNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFV 210 Query: 1274 AFKSSEDATRALVAMNGKMVGSKPLYV 1354 F +S++ AL M G + + + V Sbjct: 211 KFTNSDEQQLALSEMQGVFLNGRAIKV 237
>Q99181:HSH49_YEAST Protein HSH49 - Saccharomyces cerevisiae (Baker's yeast)| Length = 213 Score = 69.3 bits (168), Expect = 7e-11 Identities = 52/205 (25%), Positives = 98/205 (47%), Gaps = 11/205 (5%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 +YVG++D + QL+++F Q+ V+ ++ +D + GYA++ F + DA A++++ Sbjct: 11 VYVGNIDPRITKEQLYELFIQINPVLRIKYPKDKVLQAYQGYAFIEFYNQGDAQYAIKIM 70 Query: 473 NFT-PVNGKPIRIMYSNRD------PSSRKSG----AANIFIKNLDKSIDNKALYDTFSA 619 N T + + I++ PS+ A +FIKNL SID+ L F+ Sbjct: 71 NNTVRLYDRLIKVRQVTNSTGTTNLPSNISKDMILPIAKLFIKNLADSIDSDQLVKIFNK 130 Query: 620 FGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERE 799 FG ++ +S +V +E E A AI LN L+ + ++ V +E Sbjct: 131 FGKLIREPEIFYLSNGKLKCAYVYFEDFEKADLAIKSLNNQLVANNRITVD----YAFKE 186 Query: 800 NVFGSPKFNNVYVKNLSESTTEDNL 874 N G+ K+ + + L++ + N+ Sbjct: 187 NGKGNAKYGDDVDRLLNKEALKHNM 211 Score = 55.1 bits (131), Expect = 1e-06 Identities = 43/178 (24%), Positives = 84/178 (47%), Gaps = 9/178 (5%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGES-KGYGFVQYEQDESAQNAINEL 733 +++ N+D I + LY+ F +L K + ++ +GY F+++ AQ AI + Sbjct: 11 VYVGNIDPRITKEQLYELFIQINPVLRIKYPKDKVLQAYQGYAFIEFYNQGDAQYAIKIM 70 Query: 734 NGML-LNDKKVYVGPFVRKQERENVFGSPKFNNV------YVKNLSESTTEDNLKELFGN 892 N + L D+ + V N+ + + + ++KNL++S D L ++F Sbjct: 71 NNTVRLYDRLIKVRQVTNSTGTTNLPSNISKDMILPIAKLFIKNLADSIDSDQLVKIFNK 130 Query: 893 FGP-ITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKS 1063 FG I + +GK +C +V FE+ + A A++ LN + + + V A K++ Sbjct: 131 FGKLIREPEIFYLSNGKLKC-AYVYFEDFEKADLAIKSLNNQLVANNRITVDYAFKEN 187 Score = 52.8 bits (125), Expect = 6e-06 Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 6/186 (3%) Frame = +2 Query: 824 NNVYVKNLSESTTEDNLKELFGNFGPITSV-----IVVRADDGKSRCFGFVNFENPDDAV 988 N VYV N+ T++ L ELF P+ + V++A G + F+ F N DA Sbjct: 9 NTVYVGNIDPRITKEQLYELFIQINPVLRIKYPKDKVLQAYQG----YAFIEFYNQGDAQ 64 Query: 989 HAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSV 1168 +A++ +N L R S L + K L++KNL S+ Sbjct: 65 YAIKIMNNTVRLYDRLIKVRQVTNSTGTTNLPSNISKDMILPI-----AKLFIKNLADSI 119 Query: 1169 DDDEKLKELFAEFG-TITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKP 1345 D D+ +K +F +FG I ++ SNG K +V F+ E A A+ ++N ++V + Sbjct: 120 DSDQLVK-IFNKFGKLIREPEIFYLSNGKLK-CAYVYFEDFEKADLAIKSLNNQLVANNR 177 Query: 1346 LYVALA 1363 + V A Sbjct: 178 ITVDYA 183
>O04425:FCA_ARATH Flowering time control protein FCA - Arabidopsis thaliana| (Mouse-ear cress) Length = 747 Score = 69.3 bits (168), Expect = 7e-11 Identities = 40/152 (26%), Positives = 78/152 (51%), Gaps = 3/152 (1%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L+VG + + + ++ F Q G+V+ V + +D T G +V +++ DA RA+ L Sbjct: 122 LFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIRAL 181 Query: 473 N---FTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCK 643 + P P+++ Y++ + + +F+ +L+K K + + F FG++ Sbjct: 182 HNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQFGHVEDVY 241 Query: 644 VATEMSGESKGYGFVQYEQDESAQNAINELNG 739 + + +S+G GFV+Y E+A AI+ LNG Sbjct: 242 LMRDEYRQSRGCGFVKYSSKETAMAAIDGLNG 273 Score = 63.2 bits (152), Expect = 5e-09 Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 2/162 (1%) Frame = +2 Query: 533 SRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCK-VATEMSGESKGYGFVQYEQDES 709 S +S +F+ ++ ++ + + F GN+L + + +G+ +G FV+Y + Sbjct: 114 SDRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKD 173 Query: 710 AQNAINEL-NGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELF 886 A AI L N + L V ERE + G+ +F ++V +L++ TE ++E+F Sbjct: 174 ADRAIRALHNQITLPGGTGPVQVRYADGERERI-GTLEFK-LFVGSLNKQATEKEVEEIF 231 Query: 887 GNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNG 1012 FG + V ++R + +SR GFV + + + A+ A++ LNG Sbjct: 232 LQFGHVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNG 273 Score = 47.0 bits (110), Expect = 4e-04 Identities = 44/193 (22%), Positives = 85/193 (44%), Gaps = 9/193 (4%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVHAVEDL 1006 ++V ++ + TE+ ++ F G + V +++ G+ + FV + DA A+ L Sbjct: 122 LFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIRAL 181 Query: 1007 NGK---KFDDKELYVGRAQKKSER--EMQLKESFEKSNKETADRNQGTNLYLKNLDGSVD 1171 + + + V A + ER ++ K NK+ ++ Sbjct: 182 HNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEK---------------- 225 Query: 1172 DDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNG--KMVG-SK 1342 +++E+F +FG + +MRD ++G GFV + S E A A+ +NG M G ++ Sbjct: 226 ---EVEEIFLQFGHVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQ 282 Query: 1343 PLYVALAQRKEER 1381 PL V A+ K + Sbjct: 283 PLIVRFAEPKRPK 295
>O13759:CSX1_SCHPO RNA-binding post-transcriptional regulator csx1 -| Schizosaccharomyces pombe (Fission yeast) Length = 632 Score = 68.9 bits (167), Expect = 9e-11 Identities = 53/186 (28%), Positives = 82/186 (44%), Gaps = 29/186 (15%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQV-GSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEM 469 ++VGDL + +D+ LF F + S S ++ D T +S Y +V FSS + AL Sbjct: 184 IFVGDLLPTTEDSDLFMTFRSIYPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALMH 243 Query: 470 LNFTPVNGKPIRIMYSNRDPSSRKSGAAN----------------------------IFI 565 + G+P+RI ++ P SR S AA+ +F+ Sbjct: 244 MQGYLCQGRPLRISVAS--PKSRASIAADSALGIVPTSTSNRQPNQDLCSMDPLNTTVFV 301 Query: 566 KNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGML 745 L ++ K L F FG IL+ K+ KG GFVQY + +A+ AIN + G L Sbjct: 302 GGLASNLSEKDLQVCFQPFGRILNIKIPF-----GKGCGFVQYSEKSAAEKAINTMQGAL 356 Query: 746 LNDKKV 763 + + Sbjct: 357 VGTSHI 362 Score = 61.2 bits (147), Expect = 2e-08 Identities = 63/286 (22%), Positives = 125/286 (43%), Gaps = 19/286 (6%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESK---GYGFVQYEQDESAQNAIN 727 +++ +L+ +D + +++ ++ KV + S+ Y FVQ+ +A+ A+ Sbjct: 87 LWMGDLEPWMDATFIQQLWASLNEPVNVKVMRSKASSSETLISYCFVQFSSSAAAERALM 146 Query: 728 ELNGMLLNDK----KVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNF 895 + N ++ K+ Q V P+F+ ++V +L +T + +L F + Sbjct: 147 KYNNTMIPGAHCTFKLNWATGGGIQHNNFVSRDPEFS-IFVGDLLPTTEDSDLFMTFRSI 205 Query: 896 GP--ITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSER 1069 P ++ I+V G SR +GFV F + + HA+ + G + L + A KS Sbjct: 206 YPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALMHMQGYLCQGRPLRISVASPKSRA 265 Query: 1070 EMQLKESFEKSNKETADR--NQ--------GTNLYLKNLDGSVDDDEKLKELFAEFGTIT 1219 + + T++R NQ T +++ L ++ + + L+ F FG I Sbjct: 266 SIAADSALGIVPTSTSNRQPNQDLCSMDPLNTTVFVGGLASNLSEKD-LQVCFQPFGRIL 324 Query: 1220 SCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVA 1357 + K+ KG GFV + A +A+ M G +VG+ + +A Sbjct: 325 NIKI-----PFGKGCGFVQYSEKSAAEKAINTMQGALVGTSHIRLA 365 Score = 59.3 bits (142), Expect = 7e-08 Identities = 65/279 (23%), Positives = 121/279 (43%), Gaps = 39/279 (13%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDV--NTRMSLGYAYVNFSSPADAARALE 466 L++GDL+ + + +++ + V+V+V R ++ + Y +V FSS A A RAL Sbjct: 87 LWMGDLEPWMDATFIQQLWASLNEPVNVKVMRSKASSSETLISYCFVQFSSSAAAERALM 146 Query: 467 MLNFTPVNGKPIR----------IMYSN---RDPSSRKSGAANIFIKNLDKSIDNKALYD 607 N T + G I ++N RDP +IF+ +L + ++ L+ Sbjct: 147 KYNNTMIPGAHCTFKLNWATGGGIQHNNFVSRDPE------FSIFVGDLLPTTEDSDLFM 200 Query: 608 TF-SAFGNILSCKVATE-MSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFV 781 TF S + + S K+ + ++G S+ YGFV++ ++ Q+A+ + G L + + + Sbjct: 201 TFRSIYPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALMHMQGYLCQGRPLRISVAS 260 Query: 782 RKQE----RENVFG------------------SPKFNNVYVKNLSESTTEDNLKELFGNF 895 K ++ G P V+V L+ + +E +L+ F F Sbjct: 261 PKSRASIAADSALGIVPTSTSNRQPNQDLCSMDPLNTTVFVGGLASNLSEKDLQVCFQPF 320 Query: 896 GPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNG 1012 G I + ++ GK GFV + A A+ + G Sbjct: 321 GRILN---IKIPFGKG--CGFVQYSEKSAAEKAINTMQG 354 Score = 37.7 bits (86), Expect = 0.21 Identities = 21/85 (24%), Positives = 46/85 (54%), Gaps = 1/85 (1%) Frame = +2 Query: 1121 RNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDS-NGVNKGSGFVAFKSSEDA 1297 R+ ++++ +L + +D + + + + TS K++ D G+++ GFV F S ++ Sbjct: 178 RDPEFSIFVGDLLPTTEDSDLFMTFRSIYPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQ 237 Query: 1298 TRALVAMNGKMVGSKPLYVALAQRK 1372 AL+ M G + +PL +++A K Sbjct: 238 QHALMHMQGYLCQGRPLRISVASPK 262
>Q9IBD1:CELF3_DANRE CUG-BP- and ETR-3-like factor 3 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 452 Score = 68.9 bits (167), Expect = 9e-11 Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 3/152 (1%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++G + ++++ L +F Q G + + V +D T M G A++ + + A +A L Sbjct: 9 LFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQNAL 68 Query: 473 N---FTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCK 643 + P +PI++ + S G +F+ L K + + + F FG+I C Sbjct: 69 HEQKTLPGMNRPIQV----KPADSEGRGDRKLFVGMLGKQLSDADVRKMFEPFGSIEECT 124 Query: 644 VATEMSGESKGYGFVQYEQDESAQNAINELNG 739 V G SKG FV+Y+ + AQ AI+ L+G Sbjct: 125 VLRGPDGASKGCAFVKYQSNAEAQAAISALHG 156 Score = 57.0 bits (136), Expect = 3e-07 Identities = 41/165 (24%), Positives = 80/165 (48%), Gaps = 4/165 (2%) Frame = +2 Query: 536 RKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFVQYEQDES- 709 +++ A +FI + ++++ K L F FG I V + +G KG F+ Y ES Sbjct: 2 KEADAIKLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESA 61 Query: 710 --AQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKEL 883 AQNA++E + ++ + V P + + ++V L + ++ +++++ Sbjct: 62 LKAQNALHEQKTLPGMNRPIQVKPADSEGRGD--------RKLFVGMLGKQLSDADVRKM 113 Query: 884 FGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKK 1018 F FG I V+R DG S+ FV +++ +A A+ L+G + Sbjct: 114 FEPFGSIEECTVLRGPDGASKGCAFVKYQSNAEAQAAISALHGSR 158 Score = 56.2 bits (134), Expect = 6e-07 Identities = 47/195 (24%), Positives = 87/195 (44%), Gaps = 4/195 (2%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVHAVEDL 1006 +++ + + E +LK +F FG I + V++ G + F+ + + A+ A L Sbjct: 9 LFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQNAL 68 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 + +K R +Q+K + ++ DR + K L D + Sbjct: 69 HEQK----------TLPGMNRPIQVKPA---DSEGRGDRKLFVGMLGKQLS-----DADV 110 Query: 1187 KELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMV---GSKPLYVA 1357 +++F FG+I C V+R +G +KG FV ++S+ +A A+ A++G S L V Sbjct: 111 RKMFEPFGSIEECTVLRGPDGASKGCAFVKYQSNAEAQAAISALHGSRTLPGASSSLVVK 170 Query: 1358 LAQRKEERRARLQAQ 1402 A ++ER R Q Sbjct: 171 FADTEKERGIRRMQQ 185 Score = 51.2 bits (121), Expect = 2e-05 Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 2/87 (2%) Frame = +2 Query: 788 QERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITS--VIVVRADDGKSRCFGFV 961 Q+RE P+ N+++ +L + T+ + ++F FG + S V V RA + +S+CFGFV Sbjct: 359 QQREG----PEGCNIFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATN-QSKCFGFV 413 Query: 962 NFENPDDAVHAVEDLNGKKFDDKELYV 1042 +F+NP A A++ +NG + K L V Sbjct: 414 SFDNPASAQAAIQAMNGFQIGMKRLKV 440 Score = 50.8 bits (120), Expect = 2e-05 Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 1/87 (1%) Frame = +2 Query: 1127 QGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATR 1303 +G N+++ +L D E L ++F FG + S KV D + +K GFV+F + A Sbjct: 365 EGCNIFIYHLPQEFTDSEML-QMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASAQA 423 Query: 1304 ALVAMNGKMVGSKPLYVALAQRKEERR 1384 A+ AMNG +G K L V L + K+ R Sbjct: 424 AIQAMNGFQIGMKRLKVQLKRPKDANR 450 Score = 50.1 bits (118), Expect = 4e-05 Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%) Frame = +2 Query: 554 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMS-GESKGYGFVQYEQDESAQNAINE 730 NIFI +L + + + F FGN++S KV + + +SK +GFV ++ SAQ AI Sbjct: 368 NIFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQA 427 Query: 731 LNGMLLNDKKVYV 769 +NG + K++ V Sbjct: 428 MNGFQIGMKRLKV 440
>Q5RC80:RBM39_PONPY RNA-binding protein 39 - Pongo pygmaeus (Orangutan)| Length = 524 Score = 68.6 bits (166), Expect = 1e-10 Identities = 50/166 (30%), Positives = 78/166 (46%), Gaps = 11/166 (6%) Frame = +2 Query: 308 LDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEMLNFTPV 487 L ++ L + FS VG V VR+ D N+R S G AYV F + A+ + V Sbjct: 160 LAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTG-QRV 218 Query: 488 NGKPIRIMYSNRDPSSRKSGAANI----------FIKNLDKSIDNKALYDTFSAFGNILS 637 G PI + S + + + A N+ ++ +L +I L F FG I S Sbjct: 219 LGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIES 278 Query: 638 CKVATEM-SGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVG 772 ++ + +G SKGYGF+ + E A+ A+ +LNG L + + VG Sbjct: 279 IQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 324 Score = 63.5 bits (153), Expect = 4e-09 Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 12/202 (5%) Frame = +2 Query: 497 PIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEM-SGESK 673 P+R N P R A +F L I + L + FS G + ++ ++ S SK Sbjct: 137 PVREPIDNLTPEERD--ARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 194 Query: 674 GYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNV------- 832 G +V++ S AI L + + V V+ + E + NN+ Sbjct: 195 GIAYVEFVDVSSVPLAIG-----LTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGP 249 Query: 833 ---YVKNLSESTTEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHAVE 1000 YV +L + TED L+ +F FG I S+ +++ ++ G+S+ +GF+ F + + A A+E Sbjct: 250 MRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALE 309 Query: 1001 DLNGKKFDDKELYVGRAQKKSE 1066 LNG + + + VG ++++ Sbjct: 310 QLNGFELAGRPMKVGHVTERTD 331 Score = 56.6 bits (135), Expect = 4e-07 Identities = 45/177 (25%), Positives = 83/177 (46%), Gaps = 2/177 (1%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHAVEDL 1006 V+ L+ +L+E F G + V ++ + +S+ +V F + A+ L Sbjct: 155 VFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI-GL 213 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 G++ + V +Q + R + + +K + LY+ +L ++ +D L Sbjct: 214 TGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPM------RLYVGSLHFNITED-ML 266 Query: 1187 KELFAEFGTITSCKVMRDSN-GVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYV 1354 + +F FG I S ++M DS G +KG GF+ F SE A +AL +NG + +P+ V Sbjct: 267 RGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323 Score = 51.2 bits (121), Expect = 2e-05 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 2/86 (2%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LYVG L ++ + L +F G + S+++ D T S GY ++ FS A +ALE L Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311 Query: 473 NFTPVNGKPIRI--MYSNRDPSSRKS 544 N + G+P+++ + D SS S Sbjct: 312 NGFELAGRPMKVGHVTERTDASSASS 337
>Q8VH51:RBM39_MOUSE RNA-binding protein 39 - Mus musculus (Mouse)| Length = 530 Score = 68.6 bits (166), Expect = 1e-10 Identities = 50/166 (30%), Positives = 78/166 (46%), Gaps = 11/166 (6%) Frame = +2 Query: 308 LDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEMLNFTPV 487 L ++ L + FS VG V VR+ D N+R S G AYV F + A+ + V Sbjct: 160 LAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSRGIAYVEFVDVSSVRLAIGLTG-QRV 218 Query: 488 NGKPIRIMYSNRDPSSRKSGAANI----------FIKNLDKSIDNKALYDTFSAFGNILS 637 G PI + S + + + A N+ ++ +L +I L F FG I S Sbjct: 219 LGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIES 278 Query: 638 CKVATEM-SGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVG 772 ++ + +G SKGYGF+ + E A+ A+ +LNG L + + VG Sbjct: 279 IQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 324 Score = 63.2 bits (152), Expect = 5e-09 Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 12/202 (5%) Frame = +2 Query: 497 PIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEM-SGESK 673 P+R N P R A +F L I + L + FS G + ++ ++ S S+ Sbjct: 137 PVREPIDNLTPEERD--ARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSR 194 Query: 674 GYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNV------- 832 G +V++ S + AI L + + V V+ + E + NN+ Sbjct: 195 GIAYVEFVDVSSVRLAIG-----LTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGP 249 Query: 833 ---YVKNLSESTTEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHAVE 1000 YV +L + TED L+ +F FG I S+ +++ ++ G+S+ +GF+ F + + A A+E Sbjct: 250 MRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALE 309 Query: 1001 DLNGKKFDDKELYVGRAQKKSE 1066 LNG + + + VG ++++ Sbjct: 310 QLNGFELAGRPMKVGHVTERTD 331 Score = 57.4 bits (137), Expect = 3e-07 Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 2/177 (1%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHAVEDL 1006 V+ L+ +L+E F G + V ++ + +SR +V F + A+ L Sbjct: 155 VFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSRGIAYVEFVDVSSVRLAI-GL 213 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 G++ + V +Q + R + + +K + LY+ +L ++ +D L Sbjct: 214 TGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPM------RLYVGSLHFNITED-ML 266 Query: 1187 KELFAEFGTITSCKVMRDSN-GVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYV 1354 + +F FG I S ++M DS G +KG GF+ F SE A +AL +NG + +P+ V Sbjct: 267 RGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323 Score = 51.2 bits (121), Expect = 2e-05 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 2/86 (2%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LYVG L ++ + L +F G + S+++ D T S GY ++ FS A +ALE L Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311 Query: 473 NFTPVNGKPIRI--MYSNRDPSSRKS 544 N + G+P+++ + D SS S Sbjct: 312 NGFELAGRPMKVGHVTERTDASSASS 337
>Q14498:RBM39_HUMAN RNA-binding protein 39 - Homo sapiens (Human)| Length = 530 Score = 68.6 bits (166), Expect = 1e-10 Identities = 50/166 (30%), Positives = 78/166 (46%), Gaps = 11/166 (6%) Frame = +2 Query: 308 LDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEMLNFTPV 487 L ++ L + FS VG V VR+ D N+R S G AYV F + A+ + V Sbjct: 160 LAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTG-QRV 218 Query: 488 NGKPIRIMYSNRDPSSRKSGAANI----------FIKNLDKSIDNKALYDTFSAFGNILS 637 G PI + S + + + A N+ ++ +L +I L F FG I S Sbjct: 219 LGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIES 278 Query: 638 CKVATEM-SGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVG 772 ++ + +G SKGYGF+ + E A+ A+ +LNG L + + VG Sbjct: 279 IQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVG 324 Score = 63.5 bits (153), Expect = 4e-09 Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 12/202 (5%) Frame = +2 Query: 497 PIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEM-SGESK 673 P+R N P R A +F L I + L + FS G + ++ ++ S SK Sbjct: 137 PVREPIDNLTPEERD--ARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 194 Query: 674 GYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNV------- 832 G +V++ S AI L + + V V+ + E + NN+ Sbjct: 195 GIAYVEFVDVSSVPLAIG-----LTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGP 249 Query: 833 ---YVKNLSESTTEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHAVE 1000 YV +L + TED L+ +F FG I S+ +++ ++ G+S+ +GF+ F + + A A+E Sbjct: 250 MRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALE 309 Query: 1001 DLNGKKFDDKELYVGRAQKKSE 1066 LNG + + + VG ++++ Sbjct: 310 QLNGFELAGRPMKVGHVTERTD 331 Score = 56.6 bits (135), Expect = 4e-07 Identities = 45/177 (25%), Positives = 83/177 (46%), Gaps = 2/177 (1%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHAVEDL 1006 V+ L+ +L+E F G + V ++ + +S+ +V F + A+ L Sbjct: 155 VFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI-GL 213 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 G++ + V +Q + R + + +K + LY+ +L ++ +D L Sbjct: 214 TGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPM------RLYVGSLHFNITED-ML 266 Query: 1187 KELFAEFGTITSCKVMRDSN-GVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYV 1354 + +F FG I S ++M DS G +KG GF+ F SE A +AL +NG + +P+ V Sbjct: 267 RGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323 Score = 51.2 bits (121), Expect = 2e-05 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 2/86 (2%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LYVG L ++ + L +F G + S+++ D T S GY ++ FS A +ALE L Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311 Query: 473 NFTPVNGKPIRI--MYSNRDPSSRKS 544 N + G+P+++ + D SS S Sbjct: 312 NGFELAGRPMKVGHVTERTDASSASS 337
>Q5KJL5:MRD1_CRYNE Multiple RNA-binding domain-containing protein 1 - Cryptococcus| neoformans (Filobasidiella neoformans) Length = 769 Score = 68.6 bits (166), Expect = 1e-10 Identities = 92/412 (22%), Positives = 155/412 (37%), Gaps = 50/412 (12%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L+V +L L FS G + + T LG A++ F + DA A + L Sbjct: 223 LFVRNLAFITTSESLSSHFSTYGRIDECHLPVSQTTGEPLGTAFLQFHNAEDALAAYKAL 282 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 + T G+ + ++ P + A + +D K L G + S A Sbjct: 283 DKTIFQGRLLHVLPGRAKPGQEGAAAGS-------GVVDGKVLGKRDEGRGEVKSKVDAK 335 Query: 653 EMSGESKGYGFVQ-YEQDESAQNAINELNGM----LLNDK------KVYVGPFVRKQERE 799 +KG + Y ++ ++ + G+ LLN K+ + +E + Sbjct: 336 RKQESAKGVNWASLYMNSDAVAASVADRMGISKSELLNADSGNSAVKLALAETTVIEETK 395 Query: 800 NVFGSPKF-------------NNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGK 940 F + VKN+ T+ +L +LF G +T V++ A Sbjct: 396 KYFEEAGIVLESLQPRVPRSQTTILVKNIPYGTSIQSLTDLFAPHGKLTRVLLPPAGT-- 453 Query: 941 SRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRA-------------------QKKS 1063 G V FEN DA A + L ++ + LY+ + QK+ Sbjct: 454 ---LGVVEFENHMDAGRAFKALAYRRLGNAVLYLEKGPVGMFKSETAPGVGPISTEQKRE 510 Query: 1064 EREMQLKESFEKSNKETADRNQ-GTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVM-- 1234 E L E E ++ ++ G+ L+LK L+ + L+ + + + +V Sbjct: 511 EEAKALAEKVESLPEQPDPTDEAGSTLFLKGLNFTTTTPH-LQTVLSHIPGFSFARVQMK 569 Query: 1235 ----RDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEE 1378 R ++ G GFV FK+ E AT+AL A+ G + K L V AQR E Sbjct: 570 PDPKRPGEKLSMGYGFVGFKTKEAATKALKALEGFEIDGKSLEVKFAQRGAE 621 Score = 52.4 bits (124), Expect = 8e-06 Identities = 58/239 (24%), Positives = 94/239 (39%), Gaps = 22/239 (9%) Frame = +2 Query: 527 PSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMS----GE--SKGYGFV 688 P + +F+K L+ + L S +V + GE S GYGFV Sbjct: 527 PDPTDEAGSTLFLKGLNFTTTTPHLQTVLSHIPGFSFARVQMKPDPKRPGEKLSMGYGFV 586 Query: 689 QYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVF--------GSPKFNNVYVKN 844 ++ E+A A+ L G ++ K + V R E + G K V VKN Sbjct: 587 GFKTKEAATKALKALEGFEIDGKSLEVKFAQRGAEDDRETKKGGDAEGGKTKSTKVLVKN 646 Query: 845 LSESTTEDNLKELFGNFGPITSVIVVR------ADDGKSRCFGFVNFENPDDAVHAVEDL 1006 L T+ +++ELF +G + S+ + R +R F F+ F +A A+E L Sbjct: 647 LPFEATKKDVRELFSAYGQLKSLRLPRKAVPTSTGAQSTRGFAFLEFTTHTEAARAMEAL 706 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLD--GSVDDD 1177 + L + A + E+ +K EK E G + + LD G +D+ Sbjct: 707 KHTHLLGRHLVLQWANE--GEEVDIKGLREKVKGEVRGMEDGGDRKRRKLDFKGGKEDE 763 Score = 50.4 bits (119), Expect = 3e-05 Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 18/129 (13%) Frame = +2 Query: 401 RMSLGYAYVNFSSPADAARALEMLNFTPVNGKPIRIMYSNR----DPSSRKSGAA----- 553 ++S+GY +V F + A +AL+ L ++GK + + ++ R D ++K G A Sbjct: 578 KLSMGYGFVGFKTKEAATKALKALEGFEIDGKSLEVKFAQRGAEDDRETKKGGDAEGGKT 637 Query: 554 ---NIFIKNLDKSIDNKALYDTFSAFGNILSCK-----VATEMSGES-KGYGFVQYEQDE 706 + +KNL K + + FSA+G + S + V T +S +G+ F+++ Sbjct: 638 KSTKVLVKNLPFEATKKDVRELFSAYGQLKSLRLPRKAVPTSTGAQSTRGFAFLEFTTHT 697 Query: 707 SAQNAINEL 733 A A+ L Sbjct: 698 EAARAMEAL 706 Score = 44.7 bits (104), Expect = 0.002 Identities = 68/287 (23%), Positives = 117/287 (40%), Gaps = 19/287 (6%) Frame = +2 Query: 551 ANIFIKNLDKSIDNKALYDTFSAFGNILSCKV-ATEMSGESKGYGFVQYEQDESAQNAIN 727 + +F++NL +++L FS +G I C + ++ +GE G F+Q+ E A A Sbjct: 221 SRLFVRNLAFITTSESLSSHFSTYGRIDECHLPVSQTTGEPLGTAFLQFHNAEDALAAYK 280 Query: 728 ELNGMLLNDKKVYVGPFVRKQ------------------ERENVFGSPKFNNVYVKNLSE 853 L+ + + ++V P K +R+ G K + V K E Sbjct: 281 ALDKTIFQGRLLHVLPGRAKPGQEGAAAGSGVVDGKVLGKRDEGRGEVK-SKVDAKRKQE 339 Query: 854 STTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKE 1033 S N L+ N + + + R KS +N ++ + AV K E Sbjct: 340 SAKGVNWASLYMNSDAVAASVADRMGISKSE---LLNADSGNSAV---------KLALAE 387 Query: 1034 LYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGT 1213 V KK E + +S + R+Q T + +KN+ + L +LFA G Sbjct: 388 TTVIEETKKYFEEAGI---VLESLQPRVPRSQ-TTILVKNIPYGT-SIQSLTDLFAPHGK 442 Query: 1214 ITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYV 1354 +T +V+ G G V F++ DA RA A+ + +G+ LY+ Sbjct: 443 LT--RVLLPPAGT---LGVVEFENHMDAGRAFKALAYRRLGNAVLYL 484 Score = 35.4 bits (80), Expect = 1.1 Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 5/65 (7%) Frame = +2 Query: 341 DVFSQVGSVVSVRVCR-----DVNTRMSLGYAYVNFSSPADAARALEMLNFTPVNGKPIR 505 ++FS G + S+R+ R + + G+A++ F++ +AARA+E L T + G+ + Sbjct: 658 ELFSAYGQLKSLRLPRKAVPTSTGAQSTRGFAFLEFTTHTEAARAMEALKHTHLLGRHLV 717 Query: 506 IMYSN 520 + ++N Sbjct: 718 LQWAN 722
>Q62826:HNRPM_RAT Heterogeneous nuclear ribonucleoprotein M - Rattus norvegicus (Rat)| Length = 690 Score = 68.6 bits (166), Expect = 1e-10 Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 9/151 (5%) Frame = +2 Query: 344 VFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEMLNFTPVNGKPIRIMYSNR 523 V +VG V V + D + S G A V F +A E+LN ++G+P+++ Sbjct: 90 VKEKVGEVTYVELLMDAEGK-SRGCAVVEFKMEESMKKAAEVLNKHSLSGRPLKV---KE 145 Query: 524 DPSS-------RKSG--AANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKG 676 DP +K+G + +F+ NLD + K L + FS G ++ + + G+S+G Sbjct: 146 DPDGEHARRAMQKAGRLGSTVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRG 205 Query: 677 YGFVQYEQDESAQNAINELNGMLLNDKKVYV 769 G V +EQ A AI+ NG LL D+ ++V Sbjct: 206 IGTVTFEQSIEAVQAISMFNGQLLFDRPMHV 236 Score = 65.9 bits (159), Expect = 7e-10 Identities = 46/180 (25%), Positives = 89/180 (49%), Gaps = 1/180 (0%) Frame = +2 Query: 833 YVKNLSESTTEDNLKELFGN-FGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLN 1009 ++ N+ +LK+L G +T V ++ +GKSR V F+ + A E LN Sbjct: 73 FITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFKMEESMKKAAEVLN 132 Query: 1010 GKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLK 1189 + L V K+ + + +K+ + G+ +++ NLD V +KLK Sbjct: 133 KHSLSGRPLKV----KEDPDGEHARRAMQKAGR------LGSTVFVANLDYKVGW-KKLK 181 Query: 1190 ELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQR 1369 E+F+ G + ++ D +G ++G G V F+ S +A +A+ NG+++ +P++V + +R Sbjct: 182 EVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAISMFNGQLLFDRPMHVKMDER 241 Score = 62.8 bits (151), Expect = 6e-09 Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 3/193 (1%) Frame = +2 Query: 524 DPSSRKSGAANIFIKNLDKSIDNKALYDTFSA-FGNILSCKVATEMSGESKGYGFVQYEQ 700 +P + + FI N+ + ++L D G + ++ + G+S+G V+++ Sbjct: 61 EPYANPTKRYRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFKM 120 Query: 701 DESAQNAINELNGMLLNDK--KVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNL 874 +ES + A LN L+ + KV P R + V+V NL L Sbjct: 121 EESMKKAAEVLNKHSLSGRPLKVKEDPDGEHARRAMQKAGRLGSTVFVANLDYKVGWKKL 180 Query: 875 KELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQ 1054 KE+F G + ++ DGKSR G V FE +AV A+ NG+ D+ ++V Sbjct: 181 KEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAISMFNGQLLFDRPMHV---- 236 Query: 1055 KKSEREMQLKESF 1093 K ER + + F Sbjct: 237 KMDERALPKGDFF 249 Score = 49.3 bits (116), Expect = 7e-05 Identities = 27/74 (36%), Positives = 43/74 (58%) Frame = +2 Query: 548 AANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAIN 727 A IF++NL K L D F+ G++L + E +G+SKG G V++E E A+ A Sbjct: 612 ACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKME-NGKSKGCGVVKFESPEVAERACR 670 Query: 728 ELNGMLLNDKKVYV 769 +NGM L+ +++ V Sbjct: 671 MMNGMKLSGREIDV 684 Score = 40.0 bits (92), Expect = 0.043 Identities = 23/71 (32%), Positives = 38/71 (53%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLN 1009 ++V+NL T LK+ F G + + + ++GKS+ G V FE+P+ A A +N Sbjct: 615 IFVRNLPFDFTWKMLKDKFNECGHVLYADI-KMENGKSKGCGVVKFESPEVAERACRMMN 673 Query: 1010 GKKFDDKELYV 1042 G K +E+ V Sbjct: 674 GMKLSGREIDV 684 Score = 35.0 bits (79), Expect = 1.4 Identities = 21/59 (35%), Positives = 31/59 (52%) Frame = +2 Query: 1184 LKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVAL 1360 LK+ F E G + + + NG +KG G V F+S E A RA MNG + + + V + Sbjct: 629 LKDKFNECGHVLYADIKME-NGKSKGCGVVKFESPEVAERACRMMNGMKLSGREIDVRI 686
>Q3SWU3:HNRDL_RAT Heterogeneous nuclear ribonucleoprotein D-like - Rattus norvegicus| (Rat) Length = 322 Score = 68.2 bits (165), Expect = 1e-10 Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 6/193 (3%) Frame = +2 Query: 440 PADAARALEMLNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSA 619 P+ AARA L+ P R DPSS + +FI L K L + S Sbjct: 21 PSGAARAAPSLS-------PSRFSACPLDPSSFPTSGNKMFIGGLSWDTSKKDLTEYLSR 73 Query: 620 FGNILSCKVATE-MSGESKGYGFVQYEQDESAQNAI----NELNGMLLNDKKVYVGPFVR 784 FG ++ C + T+ ++G S+G+GFV ++ S + ++L+G L++ K+ Sbjct: 74 FGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA------- 126 Query: 785 KQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFV 961 + + G V+V LS T+E+ +KE FG FG I ++ + + + R F F+ Sbjct: 127 ----KALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFI 182 Query: 962 NFENPDDAVHAVE 1000 + + + +E Sbjct: 183 TYTDEEPVKKLLE 195
>Q4R535:CELF4_MACFA CUG-BP- and ETR-3-like factor 4 - Macaca fascicularis (Crab eating| macaque) (Cynomolgus monkey) Length = 474 Score = 68.2 bits (165), Expect = 1e-10 Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 3/152 (1%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++G + ++ + L +F + G + + V +D T M G A++ + A +A L Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115 Query: 473 N---FTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCK 643 + P +PI++ + S G +F+ L+K + F AFGNI C Sbjct: 116 HEQKTLPGMNRPIQV----KPADSESRGDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECT 171 Query: 644 VATEMSGESKGYGFVQYEQDESAQNAINELNG 739 + G SKG FV+Y AQ AIN L+G Sbjct: 172 ILRGPDGNSKGCAFVKYSSHAEAQAAINALHG 203 Score = 63.5 bits (153), Expect = 4e-09 Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 7/222 (3%) Frame = +2 Query: 434 SSPADAARALEMLNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTF 613 SSP A + L+ +P G P I + D A +FI + +++D K L F Sbjct: 25 SSPGSAGH-MNGLSHSP--GNPSTIPMKDHD-------AIKLFIGQIPRNLDEKDLKPLF 74 Query: 614 SAFGNILSCKVATE-MSGESKGYGFVQYEQDES---AQNAINELNGMLLNDKKVYVGPFV 781 FG I V + +G KG F+ Y + ES AQ+A++E + ++ + V P Sbjct: 75 EEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPAD 134 Query: 782 RKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFV 961 + + ++V L++ +ED+++ LF FG I ++R DG S+ FV Sbjct: 135 SESRGD--------RKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFV 186 Query: 962 NFENPDDAVHAVEDLNGKKF---DDKELYVGRAQKKSEREMQ 1078 + + +A A+ L+G + L V A ER M+ Sbjct: 187 KYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 228 Score = 54.7 bits (130), Expect = 2e-06 Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 4/197 (2%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVHAVEDL 1006 +++ + + E +LK LF FG I + V++ G + F+ + + A+ A L Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 + +K R +Q+K + +S DR L++ L+ +D+ + Sbjct: 116 HEQK----------TLPGMNRPIQVKPADSESR---GDRK----LFVGMLNKQQSEDD-V 157 Query: 1187 KELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMV---GSKPLYVA 1357 + LF FG I C ++R +G +KG FV + S +A A+ A++G S L V Sbjct: 158 RRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVK 217 Query: 1358 LAQRKEERRARLQAQFS 1408 A +ER R Q + Sbjct: 218 FADTDKERTMRRMQQMA 234 Score = 34.7 bits (78), Expect = 1.8 Identities = 26/86 (30%), Positives = 38/86 (44%) Frame = +2 Query: 1127 QGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRA 1306 +G NL++ +L D E L ++F FG FV+F + A A Sbjct: 407 EGCNLFIYHLPQEFGDAE-LMQMFLPFG-------------------FVSFDNPASAQTA 446 Query: 1307 LVAMNGKMVGSKPLYVALAQRKEERR 1384 + AMNG +G K L V L + K+ R Sbjct: 447 IQAMNGFQIGMKRLKVQLKRPKDANR 472 Score = 32.3 bits (72), Expect = 9.0 Identities = 23/90 (25%), Positives = 41/90 (45%) Frame = +2 Query: 773 PFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCF 952 P + +Q+RE P+ N+++ +L + + L ++F F Sbjct: 396 PMIPQQQREG----PEGCNLFIYHLPQEFGDAELMQMF-------------------LPF 432 Query: 953 GFVNFENPDDAVHAVEDLNGKKFDDKELYV 1042 GFV+F+NP A A++ +NG + K L V Sbjct: 433 GFVSFDNPASAQTAIQAMNGFQIGMKRLKV 462
>Q99020:ROAA_MOUSE Heterogeneous nuclear ribonucleoprotein A/B - Mus musculus (Mouse)| Length = 285 Score = 67.8 bits (164), Expect = 2e-10 Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 9/210 (4%) Frame = +2 Query: 530 SSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMS-GESKGYGFVQYEQDE 706 S + A +F+ L K L D F+ FG ++ C + + + G S+G+GF+ ++ Sbjct: 68 SKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSS 127 Query: 707 SAQNAINE----LNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNL 874 S + +++ L+G +++ KK ++K + +F V L+ TE+ + Sbjct: 128 SVEKVLDQKEHRLDGRVIDPKKAMA---MKKDPVKKIF---------VGGLNPEATEEKI 175 Query: 875 KELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKF---DDKELYV 1042 +E FG FG I ++ + + K R F F+ F+ D +E KKF + + Sbjct: 176 REYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLE----KKFHTVSGSKCEI 231 Query: 1043 GRAQKKSEREMQLKESFEKSNKETADRNQG 1132 AQ K + Q S + N+ +R G Sbjct: 232 KVAQPKEVYQQQQYGSGGRGNRNRGNRGSG 261 Score = 47.4 bits (111), Expect = 3e-04 Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 3/185 (1%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITS-VIVVRADDGKSRCFGFVNFENPDDAVHAVEDL 1006 ++V LS T++ +LK+ F FG + I + + G+SR FGF+ F++ +VE Sbjct: 77 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSS----SVE-- 130 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 K D KE + ++ M +K+ K +++ L+ + EK+ Sbjct: 131 --KVLDQKEHRLDGRVIDPKKAMAMKKDPVKK------------IFVGGLNPEATE-EKI 175 Query: 1187 KELFAEFGTITSCKVMRDSNGVNKGSGFV--AFKSSEDATRALVAMNGKMVGSKPLYVAL 1360 +E F +FG I + ++ D +NK GFV FK + + L + GSK + + Sbjct: 176 REYFGQFGEIEAIELPIDPK-LNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSK-CEIKV 233 Query: 1361 AQRKE 1375 AQ KE Sbjct: 234 AQPKE 238 Score = 46.6 bits (109), Expect = 5e-04 Identities = 30/150 (20%), Positives = 68/150 (45%), Gaps = 4/150 (2%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 ++VG L L D F++ G VV + D NT S G+ ++ F + + L+ Sbjct: 77 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQK 136 Query: 473 NFTPVNGK---PIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCK 643 ++G+ P + M +DP + IF+ L+ + + + F FG I + + Sbjct: 137 EHR-LDGRVIDPKKAMAMKKDPVKK------IFVGGLNPEATEEKIREYFGQFGEIEAIE 189 Query: 644 VATEMS-GESKGYGFVQYEQDESAQNAINE 730 + + + +G+ F+ +++++ + + + Sbjct: 190 LPIDPKLNKRRGFVFITFKEEDPVKKVLEK 219
>A0JM51:CELF5_XENTR CUG-BP- and ETR-3-like factor 5 - Xenopus tropicalis (Western| clawed frog) (Silurana tropicalis) Length = 486 Score = 67.8 bits (164), Expect = 2e-10 Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 3/152 (1%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNF---SSPADAARAL 463 L+VG + ++++ L +F Q G + + V +D T M G A++ + S A AL Sbjct: 49 LFVGQIPRNLEEKDLKPLFEQFGKIYELTVLKDRYTGMHKGCAFLTYCARDSAIKAQTAL 108 Query: 464 EMLNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCK 643 P +PI++ ++ S + G +F+ L K + + F AFG+I C Sbjct: 109 HEQKTLPGMARPIQVKPAD---SESRGGDRKLFVGMLSKQQSEEEVTSMFQAFGSIEECS 165 Query: 644 VATEMSGESKGYGFVQYEQDESAQNAINELNG 739 V G SKG FV++ AQ AI L+G Sbjct: 166 VLRGPDGSSKGCAFVKFSSHAEAQAAIQALHG 197 Score = 58.2 bits (139), Expect = 2e-07 Identities = 53/195 (27%), Positives = 84/195 (43%), Gaps = 4/195 (2%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVHAVEDL 1006 ++V + + E +LK LF FG I + V++ G + F+ + D A+ A L Sbjct: 49 LFVGQIPRNLEEKDLKPLFEQFGKIYELTVLKDRYTGMHKGCAFLTYCARDSAIKAQTAL 108 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 + +K G A R +Q+K + S DR + K +E++ Sbjct: 109 HEQK-----TLPGMA-----RPIQVKPA--DSESRGGDRKLFVGMLSKQ-----QSEEEV 151 Query: 1187 KELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMV---GSKPLYVA 1357 +F FG+I C V+R +G +KG FV F S +A A+ A++G S L V Sbjct: 152 TSMFQAFGSIEECSVLRGPDGSSKGCAFVKFSSHAEAQAAIQALHGSQTMPGASSSLVVK 211 Query: 1358 LAQRKEERRARLQAQ 1402 A +ER R Q Sbjct: 212 FADTDKERTLRRMQQ 226 Score = 51.6 bits (122), Expect = 1e-05 Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 1/84 (1%) Frame = +2 Query: 1127 QGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATR 1303 +G NL++ +L D+E L ++F FG I S KV D + +K GFV+F + A Sbjct: 399 EGCNLFIYHLPQEFGDNE-LTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQT 457 Query: 1304 ALVAMNGKMVGSKPLYVALAQRKE 1375 A+ AMNG +G K L V L + K+ Sbjct: 458 AIQAMNGFQIGMKRLKVQLKRPKD 481 Score = 50.4 bits (119), Expect = 3e-05 Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 1/73 (1%) Frame = +2 Query: 554 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMS-GESKGYGFVQYEQDESAQNAINE 730 N+FI +L + + L F FGNI+S KV + + +SK +GFV ++ SAQ AI Sbjct: 402 NLFIYHLPQEFGDNELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQA 461 Query: 731 LNGMLLNDKKVYV 769 +NG + K++ V Sbjct: 462 MNGFQIGMKRLKV 474 Score = 49.3 bits (116), Expect = 7e-05 Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 2/87 (2%) Frame = +2 Query: 788 QERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITS--VIVVRADDGKSRCFGFV 961 Q+RE P+ N+++ +L + ++ L ++F FG I S V + RA + +S+CFGFV Sbjct: 393 QQREG----PEGCNLFIYHLPQEFGDNELTQMFLPFGNIISSKVFMDRATN-QSKCFGFV 447 Query: 962 NFENPDDAVHAVEDLNGKKFDDKELYV 1042 +F+NP A A++ +NG + K L V Sbjct: 448 SFDNPSSAQTAIQAMNGFQIGMKRLKV 474
>Q60668:HNRPD_MOUSE Heterogeneous nuclear ribonucleoprotein D0 - Mus musculus (Mouse)| Length = 355 Score = 67.4 bits (163), Expect = 3e-10 Identities = 47/174 (27%), Positives = 84/174 (48%), Gaps = 11/174 (6%) Frame = +2 Query: 512 YSNRDPSSRKSGAAN-----IFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESK 673 +SN P ++ AA +FI L K L D FS FG ++ C + + ++G S+ Sbjct: 79 HSNSSPRHTEAAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSR 138 Query: 674 GYGFVQYEQDESAQNAINE----LNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVK 841 G+GFV +++ ES +++ LNG +++ K+ + +E V ++V Sbjct: 139 GFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKA-----MKTKEPV------KKIFVG 187 Query: 842 NLSESTTEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHAVE 1000 LS T E+ ++E FG FG + S+ + + K R F F+ F+ + +E Sbjct: 188 GLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 241
>Q923K9:ACF_RAT APOBEC1 complementation factor - Rattus norvegicus (Rat)| Length = 594 Score = 66.6 bits (161), Expect = 4e-10 Identities = 73/291 (25%), Positives = 121/291 (41%), Gaps = 21/291 (7%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINEL- 733 IFI L + + L G I ++ + +G ++GY FV + + A+NAI +L Sbjct: 58 IFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMDFNGNNRGYAFVTFSNKQEAKNAIKQLN 117 Query: 734 -----NGMLL------NDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKE 880 NG LL ++ +++VG + ++RE + +K ++E + Sbjct: 118 NYEIRNGRLLGVCASVDNCRLFVGGIPKTKKREEILSE-------MKKVTEGVVD----- 165 Query: 881 LFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQ-- 1054 V AD K+R F FV +E+ A A + L GR Q Sbjct: 166 --------VIVYPSAADKTKNRGFAFVEYESHRAAAMA----------RRRLLPGRIQLW 207 Query: 1055 ------KKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFA-EFGT 1213 +E E+++ E S K LY++NL S ++ KE + + G Sbjct: 208 GHPIAVDWAEPEVEVDEDTMSSVK---------ILYVRNLMLSTSEEMIEKEFNSIKPGA 258 Query: 1214 ITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQ 1366 + K +RD FV F + EDA A+ A+NGK++ P+ V LA+ Sbjct: 259 VERVKKIRD-------YAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAK 302 Score = 37.7 bits (86), Expect = 0.21 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 2/74 (2%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQV--GSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALE 466 LYV +L +S + + F+ + G+V V+ RD YA+V+FS+ DA A++ Sbjct: 233 LYVRNLMLSTSEEMIEKEFNSIKPGAVERVKKIRD--------YAFVHFSNREDAVEAMK 284 Query: 467 MLNFTPVNGKPIRI 508 LN ++G PI + Sbjct: 285 ALNGKVLDGSPIEV 298
>Q9JJ54:HNRPD_RAT Heterogeneous nuclear ribonucleoprotein D0 - Rattus norvegicus (Rat)| Length = 353 Score = 66.2 bits (160), Expect = 6e-10 Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 11/174 (6%) Frame = +2 Query: 512 YSNRDPSSRKSGAAN-----IFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESK 673 +SN P ++ A +FI L K L D FS FG+++ C + + ++G S+ Sbjct: 77 HSNSSPRHTEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSR 136 Query: 674 GYGFVQYEQDESAQNAINE----LNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVK 841 G+GFV +++ ES +++ LNG +++ K+ + +E V ++V Sbjct: 137 GFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKA-----MKTKEPV------KKIFVG 185 Query: 842 NLSESTTEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHAVE 1000 LS T E+ ++E FG FG + S+ + + K R F F+ F+ + +E Sbjct: 186 GLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 239
>Q9P2K5:MYEF2_HUMAN Myelin expression factor 2 - Homo sapiens (Human)| Length = 600 Score = 65.9 bits (159), Expect = 7e-10 Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 32/272 (11%) Frame = +2 Query: 641 KVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVY-VGPFVR-KQERENVFGS 814 K + S S G V+ E DESA+ ++L KK P+ + K Sbjct: 40 KQQPQHSSSSNG---VKMENDESAKEEKSDLKEKSTGSKKANRFHPYSKDKNSGTGEKKG 96 Query: 815 PKFNNVYVKNLSESTTEDNLKELFGN-FGPITSVIVVRADDGKSRCFGFVNFENPDDAVH 991 P N V++ N+ +K+L G +T V + + +GKSR G V F++ + Sbjct: 97 PNRNRVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKK 156 Query: 992 AVE-----DLNGKKFDDKELYVGRAQKKSERE-----------------MQLKESFEKSN 1105 A+E DL+G+ + KE G +++ + M L S + Sbjct: 157 ALETMNKYDLSGRPLNIKEDPDGENARRALQRTGGSFPGGHVPDMGSGLMNLPPSILNNP 216 Query: 1106 K---ETADRNQ----GTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGS 1264 E Q G+ +++ NLD V +KLKE+F+ GT+ + D +G ++G Sbjct: 217 NIPPEVISNLQAGRLGSTIFVANLDFKVGW-KKLKEVFSIAGTVKRADIKEDKDGKSRGM 275 Query: 1265 GFVAFKSSEDATRALVAMNGKMVGSKPLYVAL 1360 G V F+ + +A +A+ NG+ + +P++V + Sbjct: 276 GTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 307 Score = 51.2 bits (121), Expect = 2e-05 Identities = 45/184 (24%), Positives = 71/184 (38%), Gaps = 45/184 (24%) Frame = +2 Query: 353 QVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEMLNFTPVNGKPIRIMYSNRDPS 532 +VG V V + +D + S G V F +ALE +N ++G+P+ I + Sbjct: 123 KVGEVTYVELFKDAEGK-SRGCGVVEFKDEEFVKKALETMNKYDLSGRPLNIKEDPDGEN 181 Query: 533 SRK------------------SGAAN---------------------------IFIKNLD 577 +R+ SG N IF+ NLD Sbjct: 182 ARRALQRTGGSFPGGHVPDMGSGLMNLPPSILNNPNIPPEVISNLQAGRLGSTIFVANLD 241 Query: 578 KSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDK 757 + K L + FS G + + + G+S+G G V +EQ A AI+ NG L D+ Sbjct: 242 FKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDR 301 Query: 758 KVYV 769 ++V Sbjct: 302 PMHV 305 Score = 50.8 bits (120), Expect = 2e-05 Identities = 47/214 (21%), Positives = 83/214 (38%), Gaps = 42/214 (19%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTF-SAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINEL 733 +FI N+ + +A+ D G + ++ + G+S+G G V+++ +E + A+ + Sbjct: 102 VFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALETM 161 Query: 734 N-----GMLLNDKKVYVGPFVRKQERE----------------------NVFGSPKF--- 823 N G LN K+ G R+ + ++ +P Sbjct: 162 NKYDLSGRPLNIKEDPDGENARRALQRTGGSFPGGHVPDMGSGLMNLPPSILNNPNIPPE 221 Query: 824 -----------NNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFE 970 + ++V NL LKE+F G + + DGKSR G V FE Sbjct: 222 VISNLQAGRLGSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFE 281 Query: 971 NPDDAVHAVEDLNGKKFDDKELYVGRAQKKSERE 1072 +AV A+ NG+ D+ ++V K E Sbjct: 282 QAIEAVQAISMFNGQFLFDRPMHVKMDDKSVPHE 315 Score = 44.7 bits (104), Expect = 0.002 Identities = 25/75 (33%), Positives = 40/75 (53%) Frame = +2 Query: 818 KFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAV 997 K N ++V+NL T LKE F G + ++ ++GKS+ G V F++P+ A A Sbjct: 521 KGNQIFVRNLPFDLTWQKLKEKFSQCGHVMFA-EIKMENGKSKGCGTVRFDSPESAEKAC 579 Query: 998 EDLNGKKFDDKELYV 1042 +NG K +E+ V Sbjct: 580 RIMNGIKISGREIDV 594 Score = 44.7 bits (104), Expect = 0.002 Identities = 22/71 (30%), Positives = 45/71 (63%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 IF++NL + + L + FS G+++ ++ E +G+SKG G V+++ ESA+ A +N Sbjct: 525 IFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKME-NGKSKGCGTVRFDSPESAEKACRIMN 583 Query: 737 GMLLNDKKVYV 769 G+ ++ +++ V Sbjct: 584 GIKISGREIDV 594 Score = 41.6 bits (96), Expect = 0.015 Identities = 25/79 (31%), Positives = 44/79 (55%) Frame = +2 Query: 1124 NQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATR 1303 ++G ++++NL + +KLKE F++ G + ++ + NG +KG G V F S E A + Sbjct: 520 SKGNQIFVRNLPFDLTW-QKLKEKFSQCGHVMFAEIKME-NGKSKGCGTVRFDSPESAEK 577 Query: 1304 ALVAMNGKMVGSKPLYVAL 1360 A MNG + + + V L Sbjct: 578 ACRIMNGIKISGREIDVRL 596
>Q14103:HNRPD_HUMAN Heterogeneous nuclear ribonucleoprotein D0 - Homo sapiens (Human)| Length = 355 Score = 65.9 bits (159), Expect = 7e-10 Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 11/174 (6%) Frame = +2 Query: 512 YSNRDPSSRKSGAAN-----IFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESK 673 +SN P ++ A +FI L K L D FS FG ++ C + + ++G S+ Sbjct: 79 HSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSR 138 Query: 674 GYGFVQYEQDESAQNAINE----LNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVK 841 G+GFV +++ ES +++ LNG +++ K+ + +E V ++V Sbjct: 139 GFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKA-----MKTKEPV------KKIFVG 187 Query: 842 NLSESTTEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHAVE 1000 LS T E+ ++E FG FG + S+ + + K R F F+ F+ + +E Sbjct: 188 GLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 241
>Q9NQ94:ACF_HUMAN APOBEC1 complementation factor - Homo sapiens (Human)| Length = 594 Score = 65.5 bits (158), Expect = 1e-09 Identities = 73/284 (25%), Positives = 121/284 (42%), Gaps = 14/284 (4%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINEL- 733 IFI L + + L G I ++ + +G ++GY FV + A+NAI +L Sbjct: 58 IFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMDFNGNNRGYAFVTFSNKVEAKNAIKQLN 117 Query: 734 -----NGMLL------NDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKE 880 NG LL ++ +++VG + ++RE + +K ++E + Sbjct: 118 NYEIRNGRLLGVCASVDNCRLFVGGIPKTKKREEILSE-------MKKVTEGVVD----- 165 Query: 881 LFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELY-VGRAQK 1057 V AD K+R F FV +E+ A A L + +L+ G A Sbjct: 166 --------VIVYPSAADKTKNRGFAFVEYESHRAAAMARRKLLPGRI---QLWGHGIAVD 214 Query: 1058 KSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKEL-FAEFGTITSCKVM 1234 +E E+++ E S K LY++NL S ++ KE + G + K + Sbjct: 215 WAEPEVEVDEDTMSSVK---------ILYVRNLMLSTSEEMIEKEFNNIKPGAVERVKKI 265 Query: 1235 RDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQ 1366 RD FV F + EDA A+ A+NGK++ P+ V LA+ Sbjct: 266 RD-------YAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAK 302 Score = 37.7 bits (86), Expect = 0.21 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 2/74 (2%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQV--GSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALE 466 LYV +L +S + + F+ + G+V V+ RD YA+V+FS+ DA A++ Sbjct: 233 LYVRNLMLSTSEEMIEKEFNNIKPGAVERVKKIRD--------YAFVHFSNREDAVEAMK 284 Query: 467 MLNFTPVNGKPIRI 508 LN ++G PI + Sbjct: 285 ALNGKVLDGSPIEV 298
>Q9BDY9:RBM4_RABIT RNA-binding protein 4 - Oryctolagus cuniculus (Rabbit)| Length = 359 Score = 65.1 bits (157), Expect = 1e-09 Identities = 42/162 (25%), Positives = 72/162 (44%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 +FI NL + + + F +G +L C + K YGFV E +A++AI L+ Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDII-------KNYGFVHIEDKTAAEDAIRNLH 56 Query: 737 GMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVI 916 L+ + V K S ++V N+S + T L+ F +GP+ Sbjct: 57 HYKLHGVNINVEASKNK--------SKASTKLHVGNISPTCTNQELRAKFEEYGPVIECD 108 Query: 917 VVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYV 1042 +V+ + FV+ E +DAV A+ L+ +F K ++V Sbjct: 109 IVKD-------YAFVHMERAEDAVEAIRGLDNTEFQGKRMHV 143
>Q8C7Q4:RBM4_MOUSE RNA-binding protein 4 - Mus musculus (Mouse)| Length = 361 Score = 65.1 bits (157), Expect = 1e-09 Identities = 42/162 (25%), Positives = 72/162 (44%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 +FI NL + + + F +G +L C + K YGFV E +A++AI L+ Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDII-------KNYGFVHIEDKTAAEDAIRNLH 56 Query: 737 GMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVI 916 L+ + V K S ++V N+S + T L+ F +GP+ Sbjct: 57 HYKLHGVNINVEASKNK--------SKASTKLHVGNISPTCTNQELRAKFEEYGPVIECD 108 Query: 917 VVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYV 1042 +V+ + FV+ E +DAV A+ L+ +F K ++V Sbjct: 109 IVKD-------YAFVHMERAEDAVEAIRGLDNTEFQGKRMHV 143
>Q64LC9:RBM4B_RAT RNA-binding protein 4B - Rattus norvegicus (Rat)| Length = 357 Score = 65.1 bits (157), Expect = 1e-09 Identities = 42/162 (25%), Positives = 72/162 (44%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 +FI NL + + + F +G +L C + K YGFV E +A++AI L+ Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDII-------KNYGFVHIEDKTAAEDAIRNLH 56 Query: 737 GMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVI 916 L+ + V K S ++V N+S + T L+ F +GP+ Sbjct: 57 HYKLHGVNINVEASKNK--------SKASTKLHVGNISPTCTNQELRAKFEEYGPVIECD 108 Query: 917 VVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYV 1042 +V+ + FV+ E +DAV A+ L+ +F K ++V Sbjct: 109 IVKD-------YAFVHMERAEDAVEAIRGLDNTEFQGKRMHV 143
>Q06AT9:RBM4B_PIG RNA-binding protein 4B - Sus scrofa (Pig)| Length = 359 Score = 65.1 bits (157), Expect = 1e-09 Identities = 42/162 (25%), Positives = 72/162 (44%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 +FI NL + + + F +G +L C + K YGFV E +A++AI L+ Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDII-------KNYGFVHIEDKTAAEDAIRNLH 56 Query: 737 GMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVI 916 L+ + V K S ++V N+S + T L+ F +GP+ Sbjct: 57 HYKLHGVNINVEASKNK--------SKASTKLHVGNISPTCTNQELRAKFEEYGPVIECD 108 Query: 917 VVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYV 1042 +V+ + FV+ E +DAV A+ L+ +F K ++V Sbjct: 109 IVKD-------YAFVHMERAEDAVEAIRGLDNTEFQGKRMHV 143
>Q8VE92:RBM4B_MOUSE RNA-binding protein 4B - Mus musculus (Mouse)| Length = 357 Score = 65.1 bits (157), Expect = 1e-09 Identities = 42/162 (25%), Positives = 72/162 (44%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 +FI NL + + + F +G +L C + K YGFV E +A++AI L+ Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDII-------KNYGFVHIEDKTAAEDAIRNLH 56 Query: 737 GMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVI 916 L+ + V K S ++V N+S + T L+ F +GP+ Sbjct: 57 HYKLHGVNINVEASKNK--------SKASTKLHVGNISPTCTNQELRAKFEEYGPVIECD 108 Query: 917 VVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYV 1042 +V+ + FV+ E +DAV A+ L+ +F K ++V Sbjct: 109 IVKD-------YAFVHMERAEDAVEAIRGLDNTEFQGKRMHV 143
>Q9BQ04:RBM4B_HUMAN RNA-binding protein 4B - Homo sapiens (Human)| Length = 359 Score = 65.1 bits (157), Expect = 1e-09 Identities = 42/162 (25%), Positives = 72/162 (44%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 +FI NL + + + F +G +L C + K YGFV E +A++AI L+ Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDII-------KNYGFVHIEDKTAAEDAIRNLH 56 Query: 737 GMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVI 916 L+ + V K S ++V N+S + T L+ F +GP+ Sbjct: 57 HYKLHGVNINVEASKNK--------SKASTKLHVGNISPTCTNQELRAKFEEYGPVIECD 108 Query: 917 VVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYV 1042 +V+ + FV+ E +DAV A+ L+ +F K ++V Sbjct: 109 IVKD-------YAFVHMERAEDAVEAIRGLDNTEFQGKRMHV 143
>Q6NU14:HNDLB_XENLA Heterogeneous nuclear ribonucleoprotein D-like-B - Xenopus laevis| (African clawed frog) Length = 291 Score = 65.1 bits (157), Expect = 1e-09 Identities = 53/218 (24%), Positives = 100/218 (45%), Gaps = 9/218 (4%) Frame = +2 Query: 551 ANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFVQYEQDESAQNAI- 724 + +FI L K L + S FG +L C + T+ ++G S+G+GFV ++ S + Sbjct: 34 SKMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGFVLFKDAVSVDKVLE 93 Query: 725 ---NELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNF 895 ++L+G L++ K+ + + G V+V LS TTE+ +K+ FG F Sbjct: 94 TKEHKLDGKLIDPKRA-----------KALQGKEPPKKVFVGGLSPETTEEQIKQYFGGF 142 Query: 896 GPITSV-IVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSERE 1072 G I ++ + + + R F FV + + ++ V + + + + + AQ K Sbjct: 143 GEIENIELPMDTKTNERRGFCFVTYTD-EEPVQKLLESRFHQIGTGKCEIKAAQPKEVYR 201 Query: 1073 MQLKESFEKSNKETADRNQG---TNLYLKNLDGSVDDD 1177 Q ++ + T R +G +N Y +N G ++D Sbjct: 202 QQQQKQQKGGRGGTRGRGRGQGYSNYYDQNYGGYGNND 239
>Q7ZWM3:CEL3B_XENLA CUG-BP- and ETR-3-like factor 3-B - Xenopus laevis (African clawed| frog) Length = 462 Score = 65.1 bits (157), Expect = 1e-09 Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 3/152 (1%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++G + ++ + L +F Q G + + V +D T M G A++ + + A +A L Sbjct: 9 LFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKAQSAL 68 Query: 473 N---FTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCK 643 + P +PI++ ++ S + +F+ L K ++ + F FGNI C Sbjct: 69 HEQKTLPGMNRPIQVKPAD---SESRGEDRKLFVGMLGKQQTDEDVRRMFETFGNIDECT 125 Query: 644 VATEMSGESKGYGFVQYEQDESAQNAINELNG 739 V G SKG FV+++ AQ AIN L+G Sbjct: 126 VLRGPDGTSKGCAFVKFQTHTEAQAAINALHG 157 Score = 63.2 bits (152), Expect = 5e-09 Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 4/165 (2%) Frame = +2 Query: 536 RKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFVQYEQDES- 709 ++ A +FI + +++D K L F FG I V + +G KG F+ Y ES Sbjct: 2 KEPDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESA 61 Query: 710 --AQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKEL 883 AQ+A++E + ++ + V P + E+ ++V L + T+++++ + Sbjct: 62 LKAQSALHEQKTLPGMNRPIQVKPADSESRGED-------RKLFVGMLGKQQTDEDVRRM 114 Query: 884 FGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKK 1018 F FG I V+R DG S+ FV F+ +A A+ L+G + Sbjct: 115 FETFGNIDECTVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSR 159 Score = 60.1 bits (144), Expect = 4e-08 Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 4/200 (2%) Frame = +2 Query: 815 PKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVH 991 P +++ + + E +LK +F FG I + V++ G + F+ + + A+ Sbjct: 4 PDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALK 63 Query: 992 AVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVD 1171 A L+ +K R +Q+K + +S R + L++ L G Sbjct: 64 AQSALHEQK----------TLPGMNRPIQVKPADSES------RGEDRKLFVGML-GKQQ 106 Query: 1172 DDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMV---GSK 1342 DE ++ +F FG I C V+R +G +KG FV F++ +A A+ A++G S Sbjct: 107 TDEDVRRMFETFGNIDECTVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRTLPGASS 166 Query: 1343 PLYVALAQRKEERRARLQAQ 1402 L V A ++ER R Q Sbjct: 167 SLVVKFADTEKERGLRRMQQ 186 Score = 53.5 bits (127), Expect = 4e-06 Identities = 32/92 (34%), Positives = 55/92 (59%), Gaps = 2/92 (2%) Frame = +2 Query: 773 PFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITS--VIVVRADDGKSR 946 P ++Q+RE P+ N+++ +L + T+ + ++F FG + S V V RA + +S+ Sbjct: 364 PPQQQQQREG----PEGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATN-QSK 418 Query: 947 CFGFVNFENPDDAVHAVEDLNGKKFDDKELYV 1042 CFGFV+F+NP A A++ +NG + K L V Sbjct: 419 CFGFVSFDNPGSAQAAIQSMNGFQIGMKRLKV 450 Score = 50.1 bits (118), Expect = 4e-05 Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%) Frame = +2 Query: 554 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMS-GESKGYGFVQYEQDESAQNAINE 730 NIFI +L + + + F FGN++S KV + + +SK +GFV ++ SAQ AI Sbjct: 378 NIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSAQAAIQS 437 Query: 731 LNGMLLNDKKVYV 769 +NG + K++ V Sbjct: 438 MNGFQIGMKRLKV 450 Score = 48.5 bits (114), Expect = 1e-04 Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 1/87 (1%) Frame = +2 Query: 1127 QGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATR 1303 +G N+++ +L D E L ++F FG + S KV D + +K GFV+F + A Sbjct: 375 EGCNIFIYHLPQEFTDSEIL-QMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSAQA 433 Query: 1304 ALVAMNGKMVGSKPLYVALAQRKEERR 1384 A+ +MNG +G K L V L + K+ R Sbjct: 434 AIQSMNGFQIGMKRLKVQLKRPKDANR 460
>Q4R979:RBM4_MACFA RNA-binding protein 4 - Macaca fascicularis (Crab eating macaque)| (Cynomolgus monkey) Length = 364 Score = 64.7 bits (156), Expect = 2e-09 Identities = 42/162 (25%), Positives = 72/162 (44%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 +FI NL + + + F +G +L C + K YGFV E +A++AI L+ Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDII-------KNYGFVHIEDKTAAEDAIRNLH 56 Query: 737 GMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVI 916 L+ + V K S ++V N+S + T L+ F +GP+ Sbjct: 57 HYKLHGVNINVEASKNK--------SKTSTKLHVGNISPTCTNKELRAKFEEYGPVIECD 108 Query: 917 VVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYV 1042 +V+ + FV+ E +DAV A+ L+ +F K ++V Sbjct: 109 IVKD-------YAFVHMERAEDAVEAIRGLDNTEFQGKRMHV 143
>Q9BWF3:RBM4_HUMAN RNA-binding protein 4 - Homo sapiens (Human)| Length = 364 Score = 64.7 bits (156), Expect = 2e-09 Identities = 42/162 (25%), Positives = 72/162 (44%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 +FI NL + + + F +G +L C + K YGFV E +A++AI L+ Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDII-------KNYGFVHIEDKTAAEDAIRNLH 56 Query: 737 GMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVI 916 L+ + V K S ++V N+S + T L+ F +GP+ Sbjct: 57 HYKLHGVNINVEASKNK--------SKTSTKLHVGNISPTCTNKELRAKFEEYGPVIECD 108 Query: 917 VVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYV 1042 +V+ + FV+ E +DAV A+ L+ +F K ++V Sbjct: 109 IVKD-------YAFVHMERAEDAVEAIRGLDNTEFQGKRMHV 143
>Q3MHX3:RBM4_BOVIN RNA-binding protein 4 - Bos taurus (Bovine)| Length = 362 Score = 64.7 bits (156), Expect = 2e-09 Identities = 42/162 (25%), Positives = 72/162 (44%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 +FI NL + + + F +G +L C + K YGFV E +A++AI L+ Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDII-------KNYGFVHIEDKTAAEDAIRNLH 56 Query: 737 GMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVI 916 L+ + V K S ++V N+S + T L+ F +GP+ Sbjct: 57 HYKLHGVNINVEASKNK--------SKTSTKLHVGNISPTCTNKELRAKFEEYGPVIECD 108 Query: 917 VVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYV 1042 +V+ + FV+ E +DAV A+ L+ +F K ++V Sbjct: 109 IVKD-------YAFVHMERAEDAVEAIRGLDNTEFQGKRMHV 143
>Q8C854:MYEF2_MOUSE Myelin expression factor 2 - Mus musculus (Mouse)| Length = 591 Score = 64.7 bits (156), Expect = 2e-09 Identities = 63/257 (24%), Positives = 115/257 (44%), Gaps = 32/257 (12%) Frame = +2 Query: 686 VQYEQDESAQNAINELNGMLLNDKKVY-VGPFVR-KQERENVFGSPKFNNVYVKNLSEST 859 V+ E DES + ++L +KK P+ + K P N V++ N+ Sbjct: 43 VKMENDESVKEEKSDLKEKSTGNKKANRFHPYSKDKNSGTGEKKGPNRNRVFISNIPYDM 102 Query: 860 TEDNLKELFGN-FGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVE-----DLNGKKF 1021 +K+L G +T V + + +GKSR G V F++ + A+E DL+G+ Sbjct: 103 KWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALETMNKYDLSGRPL 162 Query: 1022 DDKELYVG----RAQKKSEREMQLKESFEKSN----------------KETADRNQ---- 1129 + KE G RA +++ Q + + + E Q Sbjct: 163 NIKEDPDGENARRALQRTGTSFQGSHASDVGSGLVNLPPSILNNPNIPPEVISNLQAGRL 222 Query: 1130 GTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRAL 1309 G+ +++ NLD V +KLKE+F+ GT+ + D +G ++G G V F+ + +A +A+ Sbjct: 223 GSTIFVANLDFKVGW-KKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAI 281 Query: 1310 VAMNGKMVGSKPLYVAL 1360 NG+ + +P++V + Sbjct: 282 SMFNGQFLFDRPMHVKM 298 Score = 51.6 bits (122), Expect = 1e-05 Identities = 45/184 (24%), Positives = 71/184 (38%), Gaps = 45/184 (24%) Frame = +2 Query: 353 QVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEMLNFTPVNGKPIRIMYSNRDPS 532 +VG V V + +D + S G V F +ALE +N ++G+P+ I + Sbjct: 114 KVGEVTYVELFKDAEGK-SRGCGVVEFKDEEFVKKALETMNKYDLSGRPLNIKEDPDGEN 172 Query: 533 SRK------------------SGAAN---------------------------IFIKNLD 577 +R+ SG N IF+ NLD Sbjct: 173 ARRALQRTGTSFQGSHASDVGSGLVNLPPSILNNPNIPPEVISNLQAGRLGSTIFVANLD 232 Query: 578 KSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDK 757 + K L + FS G + + + G+S+G G V +EQ A AI+ NG L D+ Sbjct: 233 FKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFNGQFLFDR 292 Query: 758 KVYV 769 ++V Sbjct: 293 PMHV 296 Score = 50.8 bits (120), Expect = 2e-05 Identities = 47/214 (21%), Positives = 83/214 (38%), Gaps = 42/214 (19%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTF-SAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINEL 733 +FI N+ + +A+ D G + ++ + G+S+G G V+++ +E + A+ + Sbjct: 93 VFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALETM 152 Query: 734 N-----GMLLNDKKVYVGPFVRKQERE----------------------NVFGSPKF--- 823 N G LN K+ G R+ + ++ +P Sbjct: 153 NKYDLSGRPLNIKEDPDGENARRALQRTGTSFQGSHASDVGSGLVNLPPSILNNPNIPPE 212 Query: 824 -----------NNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFE 970 + ++V NL LKE+F G + + DGKSR G V FE Sbjct: 213 VISNLQAGRLGSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFE 272 Query: 971 NPDDAVHAVEDLNGKKFDDKELYVGRAQKKSERE 1072 +AV A+ NG+ D+ ++V K E Sbjct: 273 QAIEAVQAISMFNGQFLFDRPMHVKMDDKSVPHE 306 Score = 45.4 bits (106), Expect = 0.001 Identities = 23/71 (32%), Positives = 45/71 (63%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 IF++NL + + L + FS G+++ ++ E +G+SKG G V++E ESA+ A +N Sbjct: 516 IFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKME-NGKSKGCGTVRFESAESAEKACRIMN 574 Query: 737 GMLLNDKKVYV 769 G+ ++ +++ V Sbjct: 575 GIKISGREIDV 585 Score = 43.1 bits (100), Expect = 0.005 Identities = 25/79 (31%), Positives = 46/79 (58%) Frame = +2 Query: 1124 NQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATR 1303 ++G ++++NL + +KLKE F++ G + ++ + NG +KG G V F+S+E A + Sbjct: 511 SKGNQIFVRNLPFDLTW-QKLKEKFSQCGHVMFAEIKME-NGKSKGCGTVRFESAESAEK 568 Query: 1304 ALVAMNGKMVGSKPLYVAL 1360 A MNG + + + V L Sbjct: 569 ACRIMNGIKISGREIDVRL 587 Score = 42.7 bits (99), Expect = 0.007 Identities = 25/75 (33%), Positives = 39/75 (52%) Frame = +2 Query: 818 KFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAV 997 K N ++V+NL T LKE F G + ++ ++GKS+ G V FE+ + A A Sbjct: 512 KGNQIFVRNLPFDLTWQKLKEKFSQCGHVMFA-EIKMENGKSKGCGTVRFESAESAEKAC 570 Query: 998 EDLNGKKFDDKELYV 1042 +NG K +E+ V Sbjct: 571 RIMNGIKISGREIDV 585
>Q86SG3:DAZ4_HUMAN Deleted in azoospermia protein 4 - Homo sapiens (Human)| Length = 579 Score = 64.7 bits (156), Expect = 2e-09 Identities = 66/295 (22%), Positives = 119/295 (40%), Gaps = 17/295 (5%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 +F+ +D +D + F +G++ K+ T +G SKGYGFV + D Q + + Sbjct: 42 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVG--S 99 Query: 737 GMLLNDKKVYVGPFVRKQER-----------ENVFGSPKFNNVYVKNLSESTTEDNLKEL 883 + + KK+ +GP +RKQ+ N P+F NV+ +E+ + + Sbjct: 100 QIHFHGKKLKLGPAIRKQKLCARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITP- 158 Query: 884 FGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKS 1063 P+T + A N E P+ + +E + + Sbjct: 159 ----NPVTQHVQSAA-----------NPETPNSTI------------SREASTQSSSAAA 191 Query: 1064 EREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDS 1243 + L E N +++ +D +D+ E + F +G++ K++ + Sbjct: 192 SQGWVLPEGKIVPN----------TVFVGGIDARMDETE-IGSCFGRYGSVKEVKIITNR 240 Query: 1244 NGVNKGSGFVAFKSSEDATRALVAMNGKMVGS------KPLYVALAQRKEERRAR 1390 GV+KG GFV+F + D K+VGS K L + A RK++ AR Sbjct: 241 TGVSKGYGFVSFVNDVDVQ--------KIVGSQIHFHGKKLKLGPAIRKQKLCAR 287 Score = 43.9 bits (102), Expect = 0.003 Identities = 55/275 (20%), Positives = 113/275 (41%), Gaps = 17/275 (6%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARAL-EM 469 ++VG +D + + ++ F + GSV V++ + T +S GY +V+F + D + + Sbjct: 42 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITN-RTGVSKGYGFVSFVNDVDVQKIVGSQ 100 Query: 470 LNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSID--------------NKALYD 607 ++F +GK +++ P+ RK ++ ++ N Y Sbjct: 101 IHF---HGKKLKL-----GPAIRKQKLCARHVQPRPLVVNPPPPPQFQNVWRNPNTETYL 152 Query: 608 TFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRK 787 N ++ V + + E+ + +S+ A ++ G +L + K+ Sbjct: 153 QPQITPNPVTQHVQSAANPETPNSTISREASTQSSSAAASQ--GWVLPEGKIVP------ 204 Query: 788 QERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNF 967 N V+V + E + FG +G + V ++ G S+ +GFV+F Sbjct: 205 ------------NTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSF 252 Query: 968 ENPDDAVHAVEDLNGKK--FDDKELYVGRAQKKSE 1066 N D V+ + G + F K+L +G A +K + Sbjct: 253 VNDVD----VQKIVGSQIHFHGKKLKLGPAIRKQK 283 Score = 43.5 bits (101), Expect = 0.004 Identities = 68/314 (21%), Positives = 108/314 (34%), Gaps = 72/314 (22%) Frame = +2 Query: 824 NNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVED 1003 N V+V + E + FG +G + V ++ G S+ +GFV+F N D V+ Sbjct: 40 NTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVD----VQK 95 Query: 1004 LNGKK--FDDKELYVG---RAQKKSEREM-------------QLKESFEKSNKET----- 1114 + G + F K+L +G R QK R + Q + + N ET Sbjct: 96 IVGSQIHFHGKKLKLGPAIRKQKLCARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQ 155 Query: 1115 ---------------------------------ADRNQG----------TNLYLKNLDGS 1165 A +QG +++ +D Sbjct: 156 ITPNPVTQHVQSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDAR 215 Query: 1166 VDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGS-- 1339 +D+ E + F +G++ K++ + GV+KG GFV+F + D K+VGS Sbjct: 216 MDETE-IGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQ--------KIVGSQI 266 Query: 1340 ----KPLYVALAQRKEERRARLQAQFSQXXXXXXXXXXXXXXXXXXXXXXXXQQLFYGQP 1507 K L + A RK++ AR + QP Sbjct: 267 HFHGKKLKLGPAIRKQKLCAR-----------------------------------HVQP 291 Query: 1508 PPAFVNPQPGYGFQ 1549 P VNP P FQ Sbjct: 292 RPLVVNPPPPPQFQ 305
>Q9NQZ3:DAZ1_HUMAN Deleted in azoospermia protein 1 - Homo sapiens (Human)| Length = 744 Score = 64.7 bits (156), Expect = 2e-09 Identities = 66/295 (22%), Positives = 119/295 (40%), Gaps = 17/295 (5%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 +F+ +D +D + F +G++ K+ T +G SKGYGFV + D Q + + Sbjct: 42 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVG--S 99 Query: 737 GMLLNDKKVYVGPFVRKQER-----------ENVFGSPKFNNVYVKNLSESTTEDNLKEL 883 + + KK+ +GP +RKQ+ N P+F NV+ +E+ + + Sbjct: 100 QIHFHGKKLKLGPAIRKQKLCARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITP- 158 Query: 884 FGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKS 1063 P+T + A N E P+ + +E + + Sbjct: 159 ----NPVTQHVQSAA-----------NPETPNSTI------------SREASTQSSSAAA 191 Query: 1064 EREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDS 1243 + L E N +++ +D +D+ E + F +G++ K++ + Sbjct: 192 SQGWVLPEGKIVPN----------TVFVGGIDARMDETE-IGSCFGRYGSVKEVKIITNR 240 Query: 1244 NGVNKGSGFVAFKSSEDATRALVAMNGKMVGS------KPLYVALAQRKEERRAR 1390 GV+KG GFV+F + D K+VGS K L + A RK++ AR Sbjct: 241 TGVSKGYGFVSFVNDVDVQ--------KIVGSQIHFHGKKLKLGPAIRKQKLCAR 287 Score = 52.4 bits (124), Expect = 8e-06 Identities = 24/79 (30%), Positives = 43/79 (54%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 +F+ +D +D + F +G++ K+ T +G SKGYGFV + D Q + + Sbjct: 372 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVG--S 429 Query: 737 GMLLNDKKVYVGPFVRKQE 793 + + KK+ +GP +RKQ+ Sbjct: 430 QIHFHGKKLKLGPAIRKQK 448 Score = 51.2 bits (121), Expect = 2e-05 Identities = 90/453 (19%), Positives = 170/453 (37%), Gaps = 87/453 (19%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARAL-EM 469 ++VG +D + + ++ F + GSV V++ + T +S GY +V+F + D + + Sbjct: 42 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITN-RTGVSKGYGFVSFVNDVDVQKIVGSQ 100 Query: 470 LNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSID--------------NKALYD 607 ++F +GK +++ P+ RK ++ ++ N Y Sbjct: 101 IHF---HGKKLKL-----GPAIRKQKLCARHVQPRPLVVNPPPPPQFQNVWRNPNTETYL 152 Query: 608 TFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRK 787 N ++ V + + E+ + +S+ A ++ G +L + K+ Sbjct: 153 QPQITPNPVTQHVQSAANPETPNSTISREASTQSSSAAASQ--GWVLPEGKIVP------ 204 Query: 788 QERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNF 967 N V+V + E + FG +G + V ++ G S+ +GFV+F Sbjct: 205 ------------NTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSF 252 Query: 968 ENPDDAVHAVEDLNGKK--FDDKELYVG---RAQKKSEREM-------------QLKESF 1093 N D V+ + G + F K+L +G R QK R + Q + + Sbjct: 253 VNDVD----VQKIVGSQIHFHGKKLKLGPAIRKQKLCARHVQPRPLVVNPPPPPQFQNVW 308 Query: 1094 EKSNKET--------------------------------------ADRNQG--------- 1132 N ET A +QG Sbjct: 309 RNPNTETYLQPQITPNPVTQHVQSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIV 368 Query: 1133 -TNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRAL 1309 +++ +D +D+ E + F +G++ K++ + GV+KG GFV+F + D Sbjct: 369 PNTVFVGGIDARMDETE-IGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQ--- 424 Query: 1310 VAMNGKMVGS------KPLYVALAQRKEERRAR 1390 K+VGS K L + A RK++ AR Sbjct: 425 -----KIVGSQIHFHGKKLKLGPAIRKQKLCAR 452 Score = 43.5 bits (101), Expect = 0.004 Identities = 68/314 (21%), Positives = 108/314 (34%), Gaps = 72/314 (22%) Frame = +2 Query: 824 NNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVED 1003 N V+V + E + FG +G + V ++ G S+ +GFV+F N D V+ Sbjct: 40 NTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVD----VQK 95 Query: 1004 LNGKK--FDDKELYVG---RAQKKSEREM-------------QLKESFEKSNKET----- 1114 + G + F K+L +G R QK R + Q + + N ET Sbjct: 96 IVGSQIHFHGKKLKLGPAIRKQKLCARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQ 155 Query: 1115 ---------------------------------ADRNQG----------TNLYLKNLDGS 1165 A +QG +++ +D Sbjct: 156 ITPNPVTQHVQSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDAR 215 Query: 1166 VDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGS-- 1339 +D+ E + F +G++ K++ + GV+KG GFV+F + D K+VGS Sbjct: 216 MDETE-IGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQ--------KIVGSQI 266 Query: 1340 ----KPLYVALAQRKEERRARLQAQFSQXXXXXXXXXXXXXXXXXXXXXXXXQQLFYGQP 1507 K L + A RK++ AR + QP Sbjct: 267 HFHGKKLKLGPAIRKQKLCAR-----------------------------------HVQP 291 Query: 1508 PPAFVNPQPGYGFQ 1549 P VNP P FQ Sbjct: 292 RPLVVNPPPPPQFQ 305
>Q91579:CEL3A_XENLA CUG-BP- and ETR-3-like factor 3-A - Xenopus laevis (African clawed| frog) Length = 462 Score = 64.7 bits (156), Expect = 2e-09 Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 3/152 (1%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++G + ++ + L +F Q G + + V +D T M G A++ + + A +A L Sbjct: 9 LFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKAQSAL 68 Query: 473 N---FTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCK 643 + P +PI++ ++ S + +F+ L K ++ + F FGNI C Sbjct: 69 HEQKTLPGMNRPIQVKPAD---SESRGEDRKLFVGMLGKQQTDEDVRRMFEPFGNIDECT 125 Query: 644 VATEMSGESKGYGFVQYEQDESAQNAINELNG 739 V G SKG FV+++ AQ AIN L+G Sbjct: 126 VLRGPDGTSKGCAFVKFQTHTEAQAAINALHG 157 Score = 62.4 bits (150), Expect = 8e-09 Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 4/165 (2%) Frame = +2 Query: 536 RKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFVQYEQDES- 709 ++ A +FI + +++D K L F FG I V + +G KG F+ Y ES Sbjct: 2 KEPDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESA 61 Query: 710 --AQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKEL 883 AQ+A++E + ++ + V P + E+ ++V L + T+++++ + Sbjct: 62 LKAQSALHEQKTLPGMNRPIQVKPADSESRGED-------RKLFVGMLGKQQTDEDVRRM 114 Query: 884 FGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKK 1018 F FG I V+R DG S+ FV F+ +A A+ L+G + Sbjct: 115 FEPFGNIDECTVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSR 159 Score = 60.1 bits (144), Expect = 4e-08 Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 4/200 (2%) Frame = +2 Query: 815 PKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVH 991 P +++ + + E +LK +F FG I + V++ G + F+ + + A+ Sbjct: 4 PDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALK 63 Query: 992 AVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVD 1171 A L+ +K R +Q+K + +S R + L++ L G Sbjct: 64 AQSALHEQK----------TLPGMNRPIQVKPADSES------RGEDRKLFVGML-GKQQ 106 Query: 1172 DDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMV---GSK 1342 DE ++ +F FG I C V+R +G +KG FV F++ +A A+ A++G S Sbjct: 107 TDEDVRRMFEPFGNIDECTVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRTLPGASS 166 Query: 1343 PLYVALAQRKEERRARLQAQ 1402 L V A ++ER R Q Sbjct: 167 SLVVKFADTEKERGLRRMQQ 186 Score = 52.8 bits (125), Expect = 6e-06 Identities = 32/92 (34%), Positives = 55/92 (59%), Gaps = 2/92 (2%) Frame = +2 Query: 773 PFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITS--VIVVRADDGKSR 946 P ++Q+RE P+ N+++ +L + T+ + ++F FG + S V V RA + +S+ Sbjct: 364 PPQQQQQREG----PEGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATN-QSK 418 Query: 947 CFGFVNFENPDDAVHAVEDLNGKKFDDKELYV 1042 CFGFV+F+NP A A++ +NG + K L V Sbjct: 419 CFGFVSFDNPGSAQAAIQAMNGFQIGMKRLKV 450 Score = 49.7 bits (117), Expect = 5e-05 Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 1/87 (1%) Frame = +2 Query: 1127 QGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATR 1303 +G N+++ +L D E L ++F FG + S KV D + +K GFV+F + A Sbjct: 375 EGCNIFIYHLPQEFTDSEIL-QMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSAQA 433 Query: 1304 ALVAMNGKMVGSKPLYVALAQRKEERR 1384 A+ AMNG +G K L V L + K+ R Sbjct: 434 AIQAMNGFQIGMKRLKVQLKRPKDANR 460 Score = 49.7 bits (117), Expect = 5e-05 Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%) Frame = +2 Query: 554 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMS-GESKGYGFVQYEQDESAQNAINE 730 NIFI +L + + + F FGN++S KV + + +SK +GFV ++ SAQ AI Sbjct: 378 NIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSAQAAIQA 437 Query: 731 LNGMLLNDKKVYV 769 +NG + K++ V Sbjct: 438 MNGFQIGMKRLKV 450
>P19684:ROC5_NICSY 33 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 324 Score = 64.3 bits (155), Expect = 2e-09 Identities = 65/240 (27%), Positives = 110/240 (45%), Gaps = 5/240 (2%) Frame = +2 Query: 668 SKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNL 847 S G VQ + +E + E + +++V E E+V G +YV NL Sbjct: 75 SDGVEVVQEDDEEEVALSAEEEEEIEEKEERV---------ESESVEGG----RLYVGNL 121 Query: 848 SESTTEDNLKELFGNFGPITSVIVV--RADDGKSRCFGFVNFENPDDAVHAVEDLNGKKF 1021 S T L E+F G + +V +V R D +SR F FV + ++A A+ +G + Sbjct: 122 PFSMTSSQLSEIFAEAGTVANVEIVYDRVTD-RSRGFAFVTMGSVEEAKEAIRLFDGSQV 180 Query: 1022 DDKELYVG--RAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKEL 1195 + + V + ERE+ + + + D LY+ NL ++ + L++ Sbjct: 181 GGRTVKVNFPEVPRGGEREV-MSAKIRSTYQGFVDSPH--KLYVANLSWALTS-QGLRDA 236 Query: 1196 FAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRK 1372 FA+ S KV+ D S+G ++G GF+ F S+E AL MN + +PL + +A +K Sbjct: 237 FADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVELEGRPLRLNVAGQK 296 Score = 55.1 bits (131), Expect = 1e-06 Identities = 44/182 (24%), Positives = 90/182 (49%), Gaps = 13/182 (7%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFVQYEQDESAQNAINEL 733 +++ NL S+ + L + F+ G + + ++ + ++ S+G+ FV E A+ AI Sbjct: 116 LYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLF 175 Query: 734 NGMLLNDKKVYVG-PFV-RKQERENVFGSPKF---------NNVYVKNLSESTTEDNLKE 880 +G + + V V P V R ERE + + + +YV NLS + T L++ Sbjct: 176 DGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYVANLSWALTSQGLRD 235 Query: 881 LFGNF-GPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQK 1057 F + G +++ ++ G+SR FGF+ F + + A++ +N + + + L + A + Sbjct: 236 AFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVELEGRPLRLNVAGQ 295 Query: 1058 KS 1063 K+ Sbjct: 296 KA 297 Score = 41.2 bits (95), Expect = 0.019 Identities = 21/72 (29%), Positives = 38/72 (52%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LYV +L ++ L D F+ +S +V D ++ S G+ ++ FSS AL+ + Sbjct: 219 LYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTM 278 Query: 473 NFTPVNGKPIRI 508 N + G+P+R+ Sbjct: 279 NEVELEGRPLRL 290
>Q8WP23:BOLL_MACFA Protein boule-like - Macaca fascicularis (Crab eating macaque)| (Cynomolgus monkey) Length = 283 Score = 64.3 bits (155), Expect = 2e-09 Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 3/102 (2%) Frame = +2 Query: 497 PIRIMYSNRDPSSRKSGAA---NIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGE 667 P+ + N S+ + G IF+ +D + L FS +G++ K+ + +G Sbjct: 12 PVSPVPLNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGV 71 Query: 668 SKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQE 793 SKGYGFV +E E AQ + E + DKK+ +GP +RKQ+ Sbjct: 72 SKGYGFVTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQ 113 Score = 53.5 bits (127), Expect = 4e-06 Identities = 25/87 (28%), Positives = 47/87 (54%) Frame = +2 Query: 806 FGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDA 985 +G+ N ++V + T E +L++ F +G + V +V G S+ +GFV FE +DA Sbjct: 27 YGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDA 86 Query: 986 VHAVEDLNGKKFDDKELYVGRAQKKSE 1066 +++ + DK+L +G A +K + Sbjct: 87 QKILQEAEKLNYKDKKLNIGPAIRKQQ 113 Score = 50.4 bits (119), Expect = 3e-05 Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 3/95 (3%) Frame = +2 Query: 1103 NKETADRNQGTNLYLKNLDGSVD---DDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFV 1273 N T+ GT + + G +D ++ L++ F+++G++ K++ D GV+KG GFV Sbjct: 19 NNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFV 78 Query: 1274 AFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEE 1378 F++ EDA + L K L + A RK++ Sbjct: 79 TFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQ 113 Score = 40.8 bits (94), Expect = 0.025 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARAL--- 463 ++VG +D ++ L FSQ GSV V++ D +S GY +V F + DA + L Sbjct: 35 IFVGGIDFKTNESDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQKILQEA 93 Query: 464 EMLNF 478 E LN+ Sbjct: 94 EKLNY 98
>Q8N9W6:BOLL_HUMAN Protein boule-like - Homo sapiens (Human)| Length = 283 Score = 64.3 bits (155), Expect = 2e-09 Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 3/102 (2%) Frame = +2 Query: 497 PIRIMYSNRDPSSRKSGAA---NIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGE 667 P+ + N S+ + G IF+ +D + L FS +G++ K+ + +G Sbjct: 12 PVSPVPLNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGV 71 Query: 668 SKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQE 793 SKGYGFV +E E AQ + E + DKK+ +GP +RKQ+ Sbjct: 72 SKGYGFVTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQ 113 Score = 53.5 bits (127), Expect = 4e-06 Identities = 25/87 (28%), Positives = 47/87 (54%) Frame = +2 Query: 806 FGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDA 985 +G+ N ++V + T E +L++ F +G + V +V G S+ +GFV FE +DA Sbjct: 27 YGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDA 86 Query: 986 VHAVEDLNGKKFDDKELYVGRAQKKSE 1066 +++ + DK+L +G A +K + Sbjct: 87 QKILQEAEKLNYKDKKLNIGPAIRKQQ 113 Score = 50.4 bits (119), Expect = 3e-05 Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 3/95 (3%) Frame = +2 Query: 1103 NKETADRNQGTNLYLKNLDGSVD---DDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFV 1273 N T+ GT + + G +D ++ L++ F+++G++ K++ D GV+KG GFV Sbjct: 19 NNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFV 78 Query: 1274 AFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEE 1378 F++ EDA + L K L + A RK++ Sbjct: 79 TFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQ 113 Score = 40.8 bits (94), Expect = 0.025 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARAL--- 463 ++VG +D ++ L FSQ GSV V++ D +S GY +V F + DA + L Sbjct: 35 IFVGGIDFKTNESDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFVTFETQEDAQKILQEA 93 Query: 464 EMLNF 478 E LN+ Sbjct: 94 EKLNY 98
>Q5R9H4:ACF_PONPY APOBEC1 complementation factor - Pongo pygmaeus (Orangutan)| Length = 587 Score = 64.3 bits (155), Expect = 2e-09 Identities = 73/291 (25%), Positives = 120/291 (41%), Gaps = 21/291 (7%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINEL- 733 IFI L + + L G I ++ + +G ++GY FV + A+NAI +L Sbjct: 58 IFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMDFNGNNRGYAFVTFSNKLEAKNAIKQLN 117 Query: 734 -----NGMLL------NDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKE 880 NG LL ++ +++VG + ++RE + +K ++E + Sbjct: 118 NYEIRNGRLLGVCASVDNCRLFVGGIPKTKKREEILSE-------MKKVTEGVVD----- 165 Query: 881 LFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQ-- 1054 V AD K+R F FV +E+ A A ++L GR Q Sbjct: 166 --------VIVYPSAADKTKNRGFAFVEYESHRAAAMA----------RRKLLPGRIQLW 207 Query: 1055 ------KKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKEL-FAEFGT 1213 +E E+++ E S K LY++NL S ++ KE + G Sbjct: 208 GHPIAVDWAEPEVEVDEDTMSSVK---------ILYVRNLMLSTSEEMIEKEFNNIKPGA 258 Query: 1214 ITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQ 1366 + K +RD FV F + EDA A+ A+NGK++ P+ V LA+ Sbjct: 259 VERVKKIRD-------YAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAK 302 Score = 37.7 bits (86), Expect = 0.21 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 2/74 (2%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQV--GSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALE 466 LYV +L +S + + F+ + G+V V+ RD YA+V+FS+ DA A++ Sbjct: 233 LYVRNLMLSTSEEMIEKEFNNIKPGAVERVKKIRD--------YAFVHFSNREDAVEAMK 284 Query: 467 MLNFTPVNGKPIRI 508 LN ++G PI + Sbjct: 285 ALNGKVLDGSPIEV 298
>Q8CFD1:DRBP1_RAT Developmentally-regulated RNA-binding protein 1 - Rattus norvegicus| (Rat) Length = 476 Score = 63.9 bits (154), Expect = 3e-09 Identities = 46/146 (31%), Positives = 76/146 (52%), Gaps = 13/146 (8%) Frame = +2 Query: 326 DAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEMLN---FTPVNGK 496 ++ L + FS G + + V RD +T+ S G A+V F+ + A RA+E ++ P + K Sbjct: 38 ESVLREHFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQACRAMEEMHGQCLGPNDTK 97 Query: 497 PIRIMYSNRDPSSRKSGA---------ANIFIKNLDKSIDNKALYDTFSAFGNILSCKVA 649 PI++ + SR SG+ IF+ + KS + L + F +G+I C V Sbjct: 98 PIKVFIAQ----SRSSGSHRDVEDEELTRIFVM-IPKSYTEEDLREKFKVYGDIEYCSVI 152 Query: 650 -TEMSGESKGYGFVQYEQDESAQNAI 724 +++GESKG G+V+Y + A AI Sbjct: 153 KNKVTGESKGLGYVRYLKPSQAAQAI 178 Score = 52.4 bits (124), Expect = 8e-06 Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 7/151 (4%) Frame = +2 Query: 572 LDKSIDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYEQDESAQNAINELNGMLL 748 + K L + FS FG+I V + + ESKG FV++ + A A+ E++G L Sbjct: 32 ISKYTSESVLREHFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQACRAMEEMHGQCL 91 Query: 749 --NDKK---VYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSV 913 ND K V++ +V + ++V + +S TE++L+E F +G I Sbjct: 92 GPNDTKPIKVFIAQSRSSGSHRDV-EDEELTRIFVM-IPKSYTEEDLREKFKVYGDIEYC 149 Query: 914 IVVRAD-DGKSRCFGFVNFENPDDAVHAVED 1003 V++ G+S+ G+V + P A A+E+ Sbjct: 150 SVIKNKVTGESKGLGYVRYLKPSQAAQAIEN 180 Score = 41.2 bits (95), Expect = 0.019 Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 4/67 (5%) Frame = +2 Query: 1184 LKELFAEFGTITSCKVMRDSNGV-NKGSGFVAFKSSEDATRALVAMNGKMVG---SKPLY 1351 L+E F+ FG I V+RD + +KG FV F S A RA+ M+G+ +G +KP+ Sbjct: 41 LREHFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQACRAMEEMHGQCLGPNDTKPIK 100 Query: 1352 VALAQRK 1372 V +AQ + Sbjct: 101 VFIAQSR 107 Score = 33.9 bits (76), Expect = 3.1 Identities = 19/57 (33%), Positives = 30/57 (52%) Frame = +2 Query: 599 LYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYV 769 L D F FGN++ + + K G+V+Y SA +AI L+G +LN ++ V Sbjct: 408 LEDIFCRFGNLIEVYLVS-----GKNVGYVKYADRMSANDAITTLHGKILNGVRLKV 459
>Q5RF83:CIRBP_PONPY Cold-inducible RNA-binding protein - Pongo pygmaeus (Orangutan)| Length = 172 Score = 63.9 bits (154), Expect = 3e-09 Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 1/80 (1%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHAVEDL 1006 ++V LS T E +L+++F +G I+ V+VV+ + +SR FGFV FEN DDA A+ + Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 1007 NGKKFDDKELYVGRAQKKSE 1066 NGK D +++ V +A K S+ Sbjct: 68 NGKSVDGRQIRVDQAGKSSD 87 Score = 51.6 bits (122), Expect = 1e-05 Identities = 27/85 (31%), Positives = 44/85 (51%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L+VG L + L VFS+ G + V V +D T+ S G+ +V F + DA A+ + Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSG 547 N V+G+ IR+ + + +R G Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRG 92 Score = 50.1 bits (118), Expect = 4e-05 Identities = 24/74 (32%), Positives = 48/74 (64%), Gaps = 1/74 (1%) Frame = +2 Query: 1172 DDEKLKELFAEFGTITSCKVMRDSNGV-NKGSGFVAFKSSEDATRALVAMNGKMVGSKPL 1348 +++ L+++F+++G I+ V++D ++G GFV F++ +DA A++AMNGK V + + Sbjct: 18 NEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQI 77 Query: 1349 YVALAQRKEERRAR 1390 V A + + R+R Sbjct: 78 RVDQAGKSSDNRSR 91 Score = 39.3 bits (90), Expect = 0.074 Identities = 20/77 (25%), Positives = 41/77 (53%), Gaps = 1/77 (1%) Frame = +2 Query: 542 SGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGE-SKGYGFVQYEQDESAQN 718 S +F+ L + ++L FS +G I V + + S+G+GFV +E + A++ Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62 Query: 719 AINELNGMLLNDKKVYV 769 A+ +NG ++ +++ V Sbjct: 63 AMMAMNGKSVDGRQIRV 79
>Q14011:CIRBP_HUMAN Cold-inducible RNA-binding protein - Homo sapiens (Human)| Length = 172 Score = 63.9 bits (154), Expect = 3e-09 Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 1/80 (1%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHAVEDL 1006 ++V LS T E +L+++F +G I+ V+VV+ + +SR FGFV FEN DDA A+ + Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 1007 NGKKFDDKELYVGRAQKKSE 1066 NGK D +++ V +A K S+ Sbjct: 68 NGKSVDGRQIRVDQAGKSSD 87 Score = 51.6 bits (122), Expect = 1e-05 Identities = 27/85 (31%), Positives = 44/85 (51%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L+VG L + L VFS+ G + V V +D T+ S G+ +V F + DA A+ + Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSG 547 N V+G+ IR+ + + +R G Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRG 92 Score = 50.1 bits (118), Expect = 4e-05 Identities = 24/74 (32%), Positives = 48/74 (64%), Gaps = 1/74 (1%) Frame = +2 Query: 1172 DDEKLKELFAEFGTITSCKVMRDSNGV-NKGSGFVAFKSSEDATRALVAMNGKMVGSKPL 1348 +++ L+++F+++G I+ V++D ++G GFV F++ +DA A++AMNGK V + + Sbjct: 18 NEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQI 77 Query: 1349 YVALAQRKEERRAR 1390 V A + + R+R Sbjct: 78 RVDQAGKSSDNRSR 91 Score = 39.3 bits (90), Expect = 0.074 Identities = 20/77 (25%), Positives = 41/77 (53%), Gaps = 1/77 (1%) Frame = +2 Query: 542 SGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGE-SKGYGFVQYEQDESAQN 718 S +F+ L + ++L FS +G I V + + S+G+GFV +E + A++ Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62 Query: 719 AINELNGMLLNDKKVYV 769 A+ +NG ++ +++ V Sbjct: 63 AMMAMNGKSVDGRQIRV 79
>Q5YD48:ACF_MOUSE APOBEC1 complementation factor - Mus musculus (Mouse)| Length = 595 Score = 63.9 bits (154), Expect = 3e-09 Identities = 72/291 (24%), Positives = 120/291 (41%), Gaps = 21/291 (7%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 IFI L + + L G I ++ + +G ++GY FV + + A+NAI +LN Sbjct: 58 IFIGKLPRDLFEDELIPLCEKIGKIYEMRLMMDFNGNNRGYAFVTFSNKQEAKNAIKQLN 117 Query: 737 ------GMLL------NDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKE 880 G LL ++ +++ G + ++RE + +K ++E + Sbjct: 118 NYEIRTGRLLGVCASVDNCRLFRGGIPKTKKREEILSE-------MKKVTEGVVD----- 165 Query: 881 LFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQ-- 1054 V AD K+R F FV +E+ A A + L GR Q Sbjct: 166 --------VIVYPSAADKTKNRGFAFVEYESHRAAAMA----------RRRLLPGRIQLW 207 Query: 1055 ------KKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFA-EFGT 1213 +E E+++ E S K LY++NL S ++ KE + + G Sbjct: 208 GHPIAVDWAEPEVEVDEDTMSSVK---------ILYVRNLMLSTSEEMIEKEFNSIKPGA 258 Query: 1214 ITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQ 1366 + K +RD FV F + EDA A+ A+NGK++ P+ V LA+ Sbjct: 259 VERVKKIRD-------YAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAK 302 Score = 37.7 bits (86), Expect = 0.21 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 2/74 (2%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQV--GSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALE 466 LYV +L +S + + F+ + G+V V+ RD YA+V+FS+ DA A++ Sbjct: 233 LYVRNLMLSTSEEMIEKEFNSIKPGAVERVKKIRD--------YAFVHFSNREDAVEAMK 284 Query: 467 MLNFTPVNGKPIRI 508 LN ++G PI + Sbjct: 285 ALNGKVLDGSPIEV 298
>Q02926:RB97D_DROME Ribonucleoprotein RB97D - Drosophila melanogaster (Fruit fly)| Length = 471 Score = 63.5 bits (153), Expect = 4e-09 Identities = 49/186 (26%), Positives = 89/186 (47%), Gaps = 11/186 (5%) Frame = +2 Query: 788 QERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVN 964 +E +++ +++ L+ TTE+NLK +G +G + V+V+R A +SR FGF+ Sbjct: 20 REEDDICELEHLRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFIT 79 Query: 965 FENPDDAVHAVEDLNGKKFDDKELYVGRAQKK-----SEREMQLKESFEKSNKETADRNQ 1129 + K L V RAQ+ + ++ K + + +E+ + Sbjct: 80 Y-------------------TKSLMVDRAQENRPHIIDGKTVEAKRALPRPERESRE--- 117 Query: 1130 GTNLYLKNL--DGSVD--DDEKLKELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSED 1294 TN+ +K L G D D+E L+E F +FG + S K++ D + G +G FV F + Sbjct: 118 -TNISVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDA 176 Query: 1295 ATRALV 1312 +A++ Sbjct: 177 VDKAIL 182 Score = 47.0 bits (110), Expect = 4e-04 Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 6/153 (3%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGE-SKGYGFVQYEQ----DESAQNA 721 +FI L + L + +G ++ V + + + S+G+GF+ Y + D + +N Sbjct: 34 LFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQENR 93 Query: 722 INELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGP 901 + ++G + K+ P ERE+ + ++V L ++ E+ L+E F FG Sbjct: 94 PHIIDGKTVEAKRALPRP-----ERESRETNISVKKLFVGGLKDNHDEECLREYFLQFGN 148 Query: 902 ITSV-IVVRADDGKSRCFGFVNFENPDDAVHAV 997 + SV ++ GK R F FV F++ D A+ Sbjct: 149 VVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAI 181 Score = 33.5 bits (75), Expect = 4.0 Identities = 18/47 (38%), Positives = 27/47 (57%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNF 433 L+VG L + + L + F Q G+VVSV++ D T G+A+V F Sbjct: 125 LFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEF 171
>Q8BHN5:DRBP1_MOUSE Developmentally-regulated RNA-binding protein 1 - Mus musculus| (Mouse) Length = 476 Score = 63.5 bits (153), Expect = 4e-09 Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 13/139 (9%) Frame = +2 Query: 347 FSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEMLN---FTPVNGKPIRIMYS 517 FS G + + V RD +T+ S G A+V F+ + A RA+E ++ P + KPI++ + Sbjct: 45 FSPFGDIQDIWVVRDKHTKESKGVAFVKFARSSQACRAMEEMHGQCLGPSDTKPIKVFIA 104 Query: 518 NRDPSSRKSGA---------ANIFIKNLDKSIDNKALYDTFSAFGNILSCKVA-TEMSGE 667 SR SG+ IF+ + KS + L + F +G+I C + +++GE Sbjct: 105 Q----SRSSGSHRDVEDEELTRIFVM-IPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGE 159 Query: 668 SKGYGFVQYEQDESAQNAI 724 SKG G+V+Y + A AI Sbjct: 160 SKGLGYVRYLKPSQAAQAI 178 Score = 51.6 bits (122), Expect = 1e-05 Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 7/151 (4%) Frame = +2 Query: 572 LDKSIDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYEQDESAQNAINELNGMLL 748 + K L + FS FG+I V + + ESKG FV++ + A A+ E++G L Sbjct: 32 ISKHTSELVLRERFSPFGDIQDIWVVRDKHTKESKGVAFVKFARSSQACRAMEEMHGQCL 91 Query: 749 NDK-----KVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSV 913 KV++ +V + ++V + +S TE++L+E F +G I Sbjct: 92 GPSDTKPIKVFIAQSRSSGSHRDV-EDEELTRIFVM-IPKSYTEEDLREKFKVYGDIEYC 149 Query: 914 IVVRAD-DGKSRCFGFVNFENPDDAVHAVED 1003 +++ G+S+ G+V + P A A+E+ Sbjct: 150 SIIKNKVTGESKGLGYVRYLKPSQAAQAIEN 180 Score = 41.6 bits (96), Expect = 0.015 Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 4/67 (5%) Frame = +2 Query: 1184 LKELFAEFGTITSCKVMRDSNGV-NKGSGFVAFKSSEDATRALVAMNGKMVG---SKPLY 1351 L+E F+ FG I V+RD + +KG FV F S A RA+ M+G+ +G +KP+ Sbjct: 41 LRERFSPFGDIQDIWVVRDKHTKESKGVAFVKFARSSQACRAMEEMHGQCLGPSDTKPIK 100 Query: 1352 VALAQRK 1372 V +AQ + Sbjct: 101 VFIAQSR 107 Score = 34.7 bits (78), Expect = 1.8 Identities = 19/57 (33%), Positives = 30/57 (52%) Frame = +2 Query: 599 LYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYV 769 L D F FGN++ + + K G+V+Y +SA AI L+G +LN ++ V Sbjct: 408 LEDIFCRFGNLIEVYLVS-----GKNVGYVKYADRKSANEAITTLHGKILNGVRLKV 459
>Q8IUH3:DRBP1_HUMAN Developmentally-regulated RNA-binding protein 1 - Homo sapiens| (Human) Length = 476 Score = 63.5 bits (153), Expect = 4e-09 Identities = 45/146 (30%), Positives = 76/146 (52%), Gaps = 13/146 (8%) Frame = +2 Query: 326 DAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEMLN---FTPVNGK 496 ++ L + FS G + + V RD +T+ S G A+V F+ + A RA+E ++ P + K Sbjct: 38 ESVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQACRAMEEMHGQCLGPNDTK 97 Query: 497 PIRIMYSNRDPSSRKSGA---------ANIFIKNLDKSIDNKALYDTFSAFGNILSCKVA 649 PI++ + SR SG+ IF+ + KS + L + F +G+I C + Sbjct: 98 PIKVFIAQ----SRSSGSHRDVEDEELTRIFVM-IPKSYTEEDLREKFKVYGDIEYCSII 152 Query: 650 -TEMSGESKGYGFVQYEQDESAQNAI 724 +++GESKG G+V+Y + A AI Sbjct: 153 KNKVTGESKGLGYVRYLKPSQAAQAI 178 Score = 54.3 bits (129), Expect = 2e-06 Identities = 61/280 (21%), Positives = 116/280 (41%), Gaps = 29/280 (10%) Frame = +2 Query: 572 LDKSIDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYEQDESAQNAINELNGMLL 748 + K L + FS FG+I V + + ESKG FV++ + A A+ E++G L Sbjct: 32 ISKYTPESVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQACRAMEEMHGQCL 91 Query: 749 --NDKK---VYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSV 913 ND K V++ +V + ++V + +S TE++L+E F +G I Sbjct: 92 GPNDTKPIKVFIAQSRSSGSHRDV-EDEELTRIFVM-IPKSYTEEDLREKFKVYGDIEYC 149 Query: 914 IVVRAD-DGKSRCFGFVNFENPDDAVHAVEDLN-------------GKKFDDKELYVGRA 1051 +++ G+S+ G+V + P A A+E+ + + +++ Y Sbjct: 150 SIIKNKVTGESKGLGYVRYLKPSQAAQAIENCDRSFRAILAEPKNKASESSEQDYYSNMR 209 Query: 1052 QKKSEREMQL---------KESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAE 1204 Q+ E ++ + F +K + + + L + +E+L +F Sbjct: 210 QEALGHEPRVNMFPFVGEQQSEFSSFDKNDSRGQEAISKRLSVVSRVPFTEEQLFSIFDI 269 Query: 1205 FGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNG 1324 + C+V RD N G G V + + A A ++G Sbjct: 270 VPGLEYCEVQRDPYS-NYGHGVVQYFNVASAIYAKYKLHG 308 Score = 41.6 bits (96), Expect = 0.015 Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 4/67 (5%) Frame = +2 Query: 1184 LKELFAEFGTITSCKVMRDSNGV-NKGSGFVAFKSSEDATRALVAMNGKMVG---SKPLY 1351 L+E F+ FG I V+RD + +KG FV F S A RA+ M+G+ +G +KP+ Sbjct: 41 LRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQACRAMEEMHGQCLGPNDTKPIK 100 Query: 1352 VALAQRK 1372 V +AQ + Sbjct: 101 VFIAQSR 107
>Q98SJ2:DAZP1_XENLA DAZ-associated protein 1 - Xenopus laevis (African clawed frog)| Length = 360 Score = 63.5 bits (153), Expect = 4e-09 Identities = 45/176 (25%), Positives = 83/176 (47%), Gaps = 18/176 (10%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMS-GESKGYGFVQYEQDESAQNAI--- 724 +F+ LD S + L FS +G ++ C + + + +S+G+GFV+++ + Sbjct: 12 LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASR 71 Query: 725 -NELNGMLLNDKKVYVG--------PFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLK 877 + L+G ++ K P Q++E + + N ++V + + E LK Sbjct: 72 PHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENSRSNKIFVGGIPHNCGETELK 131 Query: 878 ELFGNFGPITSVIVV-RADDGKSRCFGFVNFENPDDAVHAV----EDLNGKKFDDK 1030 E F FG +T V+++ A+ + R FGF+ FE+ AV D+ GKK + K Sbjct: 132 EYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVK 187 Score = 60.1 bits (144), Expect = 4e-08 Identities = 49/195 (25%), Positives = 82/195 (42%), Gaps = 17/195 (8%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSP-------ADA 451 L+VG LD S L FSQ G VV + +D T S G+ +V F P A Sbjct: 12 LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASR 71 Query: 452 ARALEMLNF-----TPVNGKPIRIM----YSNRDPSSRKSGAANIFIKNLDKSIDNKALY 604 L+ N TP +P R + ++P + S + IF+ + + L Sbjct: 72 PHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENSRSNKIFVGGIPHNCGETELK 131 Query: 605 DTFSAFGNILSCKVATEMSGE-SKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFV 781 + F+ FG + + + + +G+GF+ +E ++S A+N ++ + KKV V Sbjct: 132 EYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN-MHFHDIMGKKVEVKRAE 190 Query: 782 RKQERENVFGSPKFN 826 + + G P N Sbjct: 191 PRDSKSQTPGPPGSN 205 Score = 58.2 bits (139), Expect = 2e-07 Identities = 44/197 (22%), Positives = 93/197 (47%), Gaps = 6/197 (3%) Frame = +2 Query: 809 GSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDA 985 G + ++V L STT++ L+ F +G + ++++ +SR FGFV F++P+ Sbjct: 5 GGDEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV 64 Query: 986 VHAVED----LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKN 1153 + L+G+ D K Q + R +E +++ T + ++ +++ Sbjct: 65 GTVLASRPHTLDGRNIDPKPCTPRGMQPERSRP---REGWQQKEPRT-ENSRSNKIFVGG 120 Query: 1154 LDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVN-KGSGFVAFKSSEDATRALVAMNGKM 1330 + + + E LKE F FG +T ++ D+ +G GF+ F+ + +A V M+ Sbjct: 121 IPHNCGETE-LKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQA-VNMHFHD 178 Query: 1331 VGSKPLYVALAQRKEER 1381 + K + V A+ ++ + Sbjct: 179 IMGKKVEVKRAEPRDSK 195
>Q924M5:BOLL_MOUSE Protein boule-like - Mus musculus (Mouse)| Length = 281 Score = 63.5 bits (153), Expect = 4e-09 Identities = 28/79 (35%), Positives = 45/79 (56%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 IF+ +D + L FS +G++ K+ + +G SKGYGF+ +E E AQ + E Sbjct: 35 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFITFETQEDAQKILQEAE 94 Query: 737 GMLLNDKKVYVGPFVRKQE 793 + DKK+ +GP +RKQ+ Sbjct: 95 KLNYKDKKLNIGPAIRKQQ 113 Score = 53.5 bits (127), Expect = 4e-06 Identities = 24/87 (27%), Positives = 48/87 (55%) Frame = +2 Query: 806 FGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDA 985 +G+ N ++V + T E++L++ F +G + V +V G S+ +GF+ FE +DA Sbjct: 27 YGTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFITFETQEDA 86 Query: 986 VHAVEDLNGKKFDDKELYVGRAQKKSE 1066 +++ + DK+L +G A +K + Sbjct: 87 QKILQEAEKLNYKDKKLNIGPAIRKQQ 113 Score = 50.4 bits (119), Expect = 3e-05 Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 3/95 (3%) Frame = +2 Query: 1103 NKETADRNQGTNLYLKNLDGSVD---DDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFV 1273 N T+ GT + + G +D ++ L++ F+++G++ K++ D GV+KG GF+ Sbjct: 19 NNPTSGPRYGTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFI 78 Query: 1274 AFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEE 1378 F++ EDA + L K L + A RK++ Sbjct: 79 TFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQ 113 Score = 39.3 bits (90), Expect = 0.074 Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 3/65 (4%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARAL--- 463 ++VG +D + L FSQ GSV V++ D +S GY ++ F + DA + L Sbjct: 35 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIVND-RAGVSKGYGFITFETQEDAQKILQEA 93 Query: 464 EMLNF 478 E LN+ Sbjct: 94 EKLNY 98
>Q5REG1:SART3_PONPY Squamous cell carcinoma antigen recognized by T-cells 3 - Pongo| pygmaeus (Orangutan) Length = 981 Score = 63.2 bits (152), Expect = 5e-09 Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 11/170 (6%) Frame = +2 Query: 293 LYVGDLDVSVQ--DAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALE 466 ++V +L S+Q DA+L +F G VV +R N GY YV F A +ALE Sbjct: 724 VFVSNLPYSMQEPDAKLRPLFEACGEVVQIRPIFS-NRGDFRGYRYVEFKEEKSALQALE 782 Query: 467 MLNFTPVNGKPIRI---MYSNRDPS------SRKSGAANIFIKNLDKSIDNKALYDTFSA 619 M + V G+P+ + + +++P S +FI L S + L + A Sbjct: 783 M-DRKSVEGRPMFVSPCVDKSKNPDFKVFRYSTSLEKHKLFISGLPFSCTKEELEEICKA 841 Query: 620 FGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYV 769 G + ++ T +G+ KG +V+YE + A A+ +++GM + + + V Sbjct: 842 HGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMKMDGMTIKENVIKV 891 Score = 52.0 bits (123), Expect = 1e-05 Identities = 45/190 (23%), Positives = 90/190 (47%), Gaps = 9/190 (4%) Frame = +2 Query: 830 VYVKNLSESTTEDN--LKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVED 1003 V+V NL S E + L+ LF G + + + ++ G R + +V F+ A+ A+E Sbjct: 724 VFVSNLPYSMQEPDAKLRPLFEACGEVVQIRPIFSNRGDFRGYRYVEFKEEKSALQALE- 782 Query: 1004 LNGKKFDDKELYVGRAQKKSE----REMQLKESFEKSNKETADRNQGTNLYLKNLDGSVD 1171 ++ K + + ++V KS+ + + S EK L++ L S Sbjct: 783 MDRKSVEGRPMFVSPCVDKSKNPDFKVFRYSTSLEKHK-----------LFISGLPFSCT 831 Query: 1172 DDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLY 1351 +E L+E+ GT+ +++ + G KG +V +++ A++A++ M+G + + Sbjct: 832 KEE-LEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMKMDGMTIKENVIK 890 Query: 1352 VALA---QRK 1372 VA++ QRK Sbjct: 891 VAISNPPQRK 900
>P82277:RRP2_SPIOL Plastid-specific 30S ribosomal protein 2, chloroplast precursor -| Spinacia oleracea (Spinach) Length = 260 Score = 63.2 bits (152), Expect = 5e-09 Identities = 47/178 (26%), Positives = 87/178 (48%), Gaps = 3/178 (1%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPIT-SVIVVRADDGKSRCFGFVNFENPDDAVHAVEDL 1006 +YV N+ + D L+ + G I + ++ G+SR FGFV + +DA +E L Sbjct: 86 LYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDANAVIEKL 145 Query: 1007 NGKKFDDKELYVGRAQKKSE-REMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEK 1183 N + +++ V +K E ++ ++ + E+ + +Y+ NL +V +E Sbjct: 146 NDTEIGGRKIKVNITEKPLEGMDIATTQAEDSQFVESPYK-----VYIGNLAKTV-TNEL 199 Query: 1184 LKELFAEFGTITSCKVMR-DSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYV 1354 LK+ F+E G + KV R + G GFV+F S E+ A+ A+N ++ + + V Sbjct: 200 LKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAAIQALNNSVLEGQKIRV 257 Score = 49.7 bits (117), Expect = 5e-05 Identities = 25/72 (34%), Positives = 43/72 (59%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 +Y+G+L +V + L D FS+ G V+ +V R T S G+ +V+FSS + A++ L Sbjct: 186 VYIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAAIQAL 245 Query: 473 NFTPVNGKPIRI 508 N + + G+ IR+ Sbjct: 246 NNSVLEGQKIRV 257 Score = 44.7 bits (104), Expect = 0.002 Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 4/119 (3%) Frame = +2 Query: 1067 REMQLKESFEKSNKETADRNQGTN-LYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDS 1243 R + +E+ S ++ +G LY+ N+ ++++DE L+ + E G I +VM D Sbjct: 61 RAVVTEETSSSSTASSSSDGEGARRLYVGNIPRNLNNDE-LRTIVEEHGAIEIAEVMYDK 119 Query: 1244 -NGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERR--ARLQAQFSQ 1411 +G ++ GFV K+ EDA + +N +G + + V + ++ E A QA+ SQ Sbjct: 120 YSGRSRRFGFVTMKTVEDANAVIEKLNDTEIGGRKIKVNITEKPLEGMDIATTQAEDSQ 178
>Q99729:ROAA_HUMAN Heterogeneous nuclear ribonucleoprotein A/B - Homo sapiens (Human)| Length = 331 Score = 63.2 bits (152), Expect = 5e-09 Identities = 52/211 (24%), Positives = 96/211 (45%), Gaps = 10/211 (4%) Frame = +2 Query: 530 SSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMS-GESKGYGFVQYEQDE 706 S + A +F+ L K L D F+ FG ++ C + + + G S+G+GF+ ++ Sbjct: 61 SKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAA 120 Query: 707 SAQNAINE----LNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLS-ESTTEDN 871 S + +++ L+G +++ KK ++K + +F V L+ ES TE+ Sbjct: 121 SVEKVLDQKEHRLDGRVIDPKKAMA---MKKDPVKKIF---------VGGLNPESPTEEK 168 Query: 872 LKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKF---DDKELY 1039 ++E FG FG I ++ + + K R F F+ F+ + +E KKF + Sbjct: 169 IREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE----KKFHTVSGSKCE 224 Query: 1040 VGRAQKKSEREMQLKESFEKSNKETADRNQG 1132 + AQ K + Q S + N+ +R G Sbjct: 225 IKVAQPKEVYQQQQYGSGGRGNRNRGNRGSG 255 Score = 53.5 bits (127), Expect = 4e-06 Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 3/185 (1%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITS-VIVVRADDGKSRCFGFVNFENPDDAVHAVEDL 1006 ++V LS T++ +LK+ F FG + I + + G+SR FGF+ F++ +VE Sbjct: 70 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKD----AASVE-- 123 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 K D KE + ++ M +K+ K +++ L+ +EK+ Sbjct: 124 --KVLDQKEHRLDGRVIDPKKAMAMKKDPVKK------------IFVGGLNPESPTEEKI 169 Query: 1187 KELFAEFGTITSCKVMRDSNGVNKGSGFV--AFKSSEDATRALVAMNGKMVGSKPLYVAL 1360 +E F EFG I + ++ D +NK GFV FK E + L + GSK + + Sbjct: 170 REYFGEFGEIEAIELPMDPK-LNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSK-CEIKV 227 Query: 1361 AQRKE 1375 AQ KE Sbjct: 228 AQPKE 232
>P78814:SRP2_SCHPO Pre-mRNA-splicing factor srp2 - Schizosaccharomyces pombe (Fission| yeast) Length = 365 Score = 62.8 bits (151), Expect = 6e-09 Identities = 45/168 (26%), Positives = 78/168 (46%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLN 1009 ++V + T +++ + F +G I ++ FGFV E+ DA V D Sbjct: 6 LFVGRIPPQATREDMMDFFKGYGQILDCKLMNG-------FGFVEVEDARDARDIVNDFQ 58 Query: 1010 GKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLK 1189 GK+F + V A+ + R +ES ++K R G L ++NL V + LK Sbjct: 59 GKEFMGSRIVVEPARGERRRRENFRES--AASKYPRPRRTGFRLIVENLSEDVSWQD-LK 115 Query: 1190 ELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMV 1333 ++ + G T D++ N G+G V F + ED AL ++NG+++ Sbjct: 116 DVMRKAGEPT----FTDAHRENPGAGVVEFSTEEDMRNALTSLNGEVI 159 Score = 53.9 bits (128), Expect = 3e-06 Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 10/163 (6%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 +F+ + + + D F +G IL CK+ G+GFV+ E A++ +N+ Sbjct: 6 LFVGRIPPQATREDMMDFFKGYGQILDCKLMN-------GFGFVEVEDARDARDIVNDFQ 58 Query: 737 GMLLNDKKVYVGPFVRKQERENVFGSPKFN----------NVYVKNLSESTTEDNLKELF 886 G ++ V P ++ R F + + V+NLSE + +LK++ Sbjct: 59 GKEFMGSRIVVEPARGERRRRENFRESAASKYPRPRRTGFRLIVENLSEDVSWQDLKDVM 118 Query: 887 GNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGK 1015 G T R + G G V F +D +A+ LNG+ Sbjct: 119 RKAGEPTFTDAHRENPGA----GVVEFSTEEDMRNALTSLNGE 157 Score = 35.8 bits (81), Expect = 0.81 Identities = 35/172 (20%), Positives = 66/172 (38%), Gaps = 15/172 (8%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L+VG + + D F G ++ C+ +N G+ +V DA + Sbjct: 6 LFVGRIPPQATREDMMDFFKGYGQILD---CKLMN-----GFGFVEVEDARDARDIVNDF 57 Query: 473 NFTPVNGKPI---------------RIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYD 607 G I R +++ P R++G + ++NL + + + L D Sbjct: 58 QGKEFMGSRIVVEPARGERRRRENFRESAASKYPRPRRTGF-RLIVENLSEDVSWQDLKD 116 Query: 608 TFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKV 763 G T+ E+ G G V++ +E +NA+ LNG ++ + V Sbjct: 117 VMRKAGE----PTFTDAHRENPGAGVVEFSTEEDMRNALTSLNGEVIKGQAV 164
>P42696:RBM34_HUMAN RNA-binding protein 34 - Homo sapiens (Human)| Length = 430 Score = 62.8 bits (151), Expect = 6e-09 Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 22/220 (10%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVR-----------------VCRDVNTRMSLGYA 421 ++VG+L V+ +L F + G + SVR + R ++ A Sbjct: 187 VFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLIPAEGTLSKKLAAIKRKIHPDQKNINA 246 Query: 422 YVNFSSPADAARALEMLNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKAL 601 YV F + A +AL+ +G IR+ ++ S K ++F+ NL ++ A+ Sbjct: 247 YVVFKEESAATQALKRNGAQIADGFRIRVDLASETSSRDKR---SVFVGNLPYKVEESAI 303 Query: 602 YDTFSAFGNILSCKVATE-MSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPF 778 F G+I++ ++ + M+G KG+G+V +E +S A+ +LN L +K+ V Sbjct: 304 EKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLAL-KLNNSELMGRKLRVMRS 362 Query: 779 VRKQERENVFGSPKFNNVYVK----NLSESTTEDNLKELF 886 V K++ + +P+ NV N + T E + K LF Sbjct: 363 VNKEKFKQQNSNPRLKNVSKPKQGLNFTSKTAEGHPKSLF 402
>P48810:RB87F_DROME Heterogeneous nuclear ribonucleoprotein 87F - Drosophila melanogaster| (Fruit fly) Length = 385 Score = 62.8 bits (151), Expect = 6e-09 Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 6/195 (3%) Frame = +2 Query: 512 YSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFV 688 Y + + + +FI LD + L F +GNI+ V + + S+G+GF+ Sbjct: 11 YDDGEEITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFI 70 Query: 689 QYEQDESAQNAIN----ELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSES 856 Y Q NA N +++G + K+ V +QE ++ ++V L + Sbjct: 71 TYSQSYMIDNAQNARPHKIDGRTVEPKRA-----VPRQEIDSPNAGATVKKLFVGGLRDD 125 Query: 857 TTEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKE 1033 E+ L+E F +FG I SV IV D GK R F F+ F++ D V + +K Sbjct: 126 HDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDD-YDPVDKIILQKTHSIKNKT 184 Query: 1034 LYVGRAQKKSEREMQ 1078 L V +A K + + Q Sbjct: 185 LDVKKAIAKQDMDRQ 199 Score = 50.1 bits (118), Expect = 4e-05 Identities = 50/201 (24%), Positives = 85/201 (42%), Gaps = 7/201 (3%) Frame = +2 Query: 797 ENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGK-SRCFGFVNFEN 973 E + + +++ L TT+D LK F +G I V+V++ K SR FGF+ + Sbjct: 15 EEITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQ 74 Query: 974 P---DDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLY 1144 D+A +A R K R ++ K + + +E N G + Sbjct: 75 SYMIDNAQNA-----------------RPHKIDGRTVEPKRAVPR--QEIDSPNAGATVK 115 Query: 1145 LKNLDGSVDD--DEKLKELFAEFGTITSCKVMRDSN-GVNKGSGFVAFKSSEDATRALVA 1315 + G DD +E L+E F +FG I S ++ D + G +G F+ F D ++ Sbjct: 116 KLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEF-DDYDPVDKIIL 174 Query: 1316 MNGKMVGSKPLYVALAQRKEE 1378 + +K L V A K++ Sbjct: 175 QKTHSIKNKTLDVKKAIAKQD 195
>Q920Q6:MSI2H_MOUSE RNA-binding protein Musashi homolog 2 - Mus musculus (Mouse)| Length = 346 Score = 62.8 bits (151), Expect = 6e-09 Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 10/194 (5%) Frame = +2 Query: 509 MYSNRDPSSRKSGAAN--------IFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MS 661 M +N P + SG+AN +FI L +L D FS FG I C V + + Sbjct: 1 MEANGSPGT--SGSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTT 58 Query: 662 GESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVK 841 S+G+GFV + S + + + L D K + P V R + ++V Sbjct: 59 KRSRGFGFVTFADPASVDKVLGQPHHEL--DSKT-IDPKVAFPRRAQPKMVTRTKKIFVG 115 Query: 842 NLSESTTEDNLKELFGNFGPI-TSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKK 1018 LS +T +++K+ F FG + ++++ + R FGFV FEN +D V V +++ + Sbjct: 116 GLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFEN-EDVVEKVCEIHFHE 174 Query: 1019 FDDKELYVGRAQKK 1060 ++K + +AQ K Sbjct: 175 INNKMVECKKAQPK 188 Score = 34.3 bits (77), Expect = 2.4 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 5/76 (6%) Frame = +2 Query: 1178 EKLKELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATRAL----VAMNGKMVGSK 1342 + L++ F++FG I C VMRD + ++G GFV F + L ++ K + K Sbjct: 35 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPK 94 Query: 1343 PLYVALAQRKEERRAR 1390 + AQ K R + Sbjct: 95 VAFPRRAQPKMVTRTK 110
>Q7ZX83:HNDLA_XENLA Heterogeneous nuclear ribonucleoprotein D-like-A - Xenopus laevis| (African clawed frog) Length = 293 Score = 62.8 bits (151), Expect = 6e-09 Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 8/162 (4%) Frame = +2 Query: 515 SNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFVQ 691 S + S + +FI L K L + S FG +L C + T+ ++G S+G+GFV Sbjct: 14 SKINASKNQQDEGKMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGFVL 73 Query: 692 YEQDESAQNAI----NELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSEST 859 ++ S + ++L+G L++ K+ + + G V+V LS T Sbjct: 74 FKDAVSVDKVLETNEHKLDGKLIDPKRA-----------KALKGKEPPKKVFVGGLSPET 122 Query: 860 TEDNLKELFGNFGPITSV---IVVRADDGKSRCFGFVNFENP 976 TE+ +K+ FG FG I ++ I + ++ + CF E P Sbjct: 123 TEEQIKQYFGGFGEIENIELPIDTKTNERRGFCFVTYTGEEP 164
>P60825:CIRBP_RAT Cold-inducible RNA-binding protein - Rattus norvegicus (Rat)| Length = 172 Score = 62.8 bits (151), Expect = 6e-09 Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 1/80 (1%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHAVEDL 1006 ++V LS T E L+++F +G I+ V+VV+ + +SR FGFV FEN DDA A+ + Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 1007 NGKKFDDKELYVGRAQKKSE 1066 NGK D +++ V +A K S+ Sbjct: 68 NGKSVDGRQIRVDQAGKSSD 87 Score = 51.2 bits (121), Expect = 2e-05 Identities = 27/85 (31%), Positives = 44/85 (51%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L+VG L + L VFS+ G + V V +D T+ S G+ +V F + DA A+ + Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSG 547 N V+G+ IR+ + + +R G Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRG 92 Score = 49.7 bits (117), Expect = 5e-05 Identities = 24/74 (32%), Positives = 48/74 (64%), Gaps = 1/74 (1%) Frame = +2 Query: 1172 DDEKLKELFAEFGTITSCKVMRDSNGV-NKGSGFVAFKSSEDATRALVAMNGKMVGSKPL 1348 +++ L+++F+++G I+ V++D ++G GFV F++ +DA A++AMNGK V + + Sbjct: 18 NEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQI 77 Query: 1349 YVALAQRKEERRAR 1390 V A + + R+R Sbjct: 78 RVDQAGKSSDNRSR 91 Score = 40.4 bits (93), Expect = 0.033 Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 1/77 (1%) Frame = +2 Query: 542 SGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGE-SKGYGFVQYEQDESAQN 718 S +F+ L + +AL FS +G I V + + S+G+GFV +E + A++ Sbjct: 3 SDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62 Query: 719 AINELNGMLLNDKKVYV 769 A+ +NG ++ +++ V Sbjct: 63 AMMAMNGKSVDGRQIRV 79
>P60824:CIRBP_MOUSE Cold-inducible RNA-binding protein - Mus musculus (Mouse)| Length = 172 Score = 62.8 bits (151), Expect = 6e-09 Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 1/80 (1%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHAVEDL 1006 ++V LS T E L+++F +G I+ V+VV+ + +SR FGFV FEN DDA A+ + Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 1007 NGKKFDDKELYVGRAQKKSE 1066 NGK D +++ V +A K S+ Sbjct: 68 NGKSVDGRQIRVDQAGKSSD 87 Score = 51.2 bits (121), Expect = 2e-05 Identities = 27/85 (31%), Positives = 44/85 (51%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L+VG L + L VFS+ G + V V +D T+ S G+ +V F + DA A+ + Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSG 547 N V+G+ IR+ + + +R G Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRG 92 Score = 49.7 bits (117), Expect = 5e-05 Identities = 24/74 (32%), Positives = 48/74 (64%), Gaps = 1/74 (1%) Frame = +2 Query: 1172 DDEKLKELFAEFGTITSCKVMRDSNGV-NKGSGFVAFKSSEDATRALVAMNGKMVGSKPL 1348 +++ L+++F+++G I+ V++D ++G GFV F++ +DA A++AMNGK V + + Sbjct: 18 NEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQI 77 Query: 1349 YVALAQRKEERRAR 1390 V A + + R+R Sbjct: 78 RVDQAGKSSDNRSR 91 Score = 40.4 bits (93), Expect = 0.033 Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 1/77 (1%) Frame = +2 Query: 542 SGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGE-SKGYGFVQYEQDESAQN 718 S +F+ L + +AL FS +G I V + + S+G+GFV +E + A++ Sbjct: 3 SDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62 Query: 719 AINELNGMLLNDKKVYV 769 A+ +NG ++ +++ V Sbjct: 63 AMMAMNGKSVDGRQIRV 79
>P60826:CIRBP_CRIGR Cold-inducible RNA-binding protein - Cricetulus griseus (Chinese| hamster) Length = 172 Score = 62.8 bits (151), Expect = 6e-09 Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 1/80 (1%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHAVEDL 1006 ++V LS T E L+++F +G I+ V+VV+ + +SR FGFV FEN DDA A+ + Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 1007 NGKKFDDKELYVGRAQKKSE 1066 NGK D +++ V +A K S+ Sbjct: 68 NGKSVDGRQIRVDQAGKSSD 87 Score = 51.2 bits (121), Expect = 2e-05 Identities = 27/85 (31%), Positives = 44/85 (51%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L+VG L + L VFS+ G + V V +D T+ S G+ +V F + DA A+ + Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSG 547 N V+G+ IR+ + + +R G Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRG 92 Score = 49.7 bits (117), Expect = 5e-05 Identities = 24/74 (32%), Positives = 48/74 (64%), Gaps = 1/74 (1%) Frame = +2 Query: 1172 DDEKLKELFAEFGTITSCKVMRDSNGV-NKGSGFVAFKSSEDATRALVAMNGKMVGSKPL 1348 +++ L+++F+++G I+ V++D ++G GFV F++ +DA A++AMNGK V + + Sbjct: 18 NEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQI 77 Query: 1349 YVALAQRKEERRAR 1390 V A + + R+R Sbjct: 78 RVDQAGKSSDNRSR 91 Score = 40.4 bits (93), Expect = 0.033 Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 1/77 (1%) Frame = +2 Query: 542 SGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGE-SKGYGFVQYEQDESAQN 718 S +F+ L + +AL FS +G I V + + S+G+GFV +E + A++ Sbjct: 3 SDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62 Query: 719 AINELNGMLLNDKKVYV 769 A+ +NG ++ +++ V Sbjct: 63 AMMAMNGKSVDGRQIRV 79
>Q5NVC8:CELF4_PONPY CUG-BP- and ETR-3-like factor 4 - Pongo pygmaeus (Orangutan)| Length = 486 Score = 62.8 bits (151), Expect = 6e-09 Identities = 62/229 (27%), Positives = 103/229 (44%), Gaps = 14/229 (6%) Frame = +2 Query: 434 SSPADAARALEMLNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTF 613 SSP A + L+ +P G P I + D A +FI + +++D K L F Sbjct: 25 SSPGSAGH-MNGLSHSP--GNPSTIPMKDHD-------AIKLFIGQIPRNLDEKDLKPLF 74 Query: 614 SAFGNILSCKVATE-MSGESKGYGFVQYEQDES---AQNAINELNGMLLNDKKVYVGPFV 781 FG I V + +G KG F+ Y + ES AQ+A++E + ++ + V P Sbjct: 75 EEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKP-- 132 Query: 782 RKQERENVFGS-------PKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGK 940 + E+ GS + ++V L++ +ED+++ LF FG I ++R DG Sbjct: 133 --ADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN 190 Query: 941 SRCFGFVNFENPDDAVHAVEDLNGKKF---DDKELYVGRAQKKSEREMQ 1078 S+ FV + + +A A+ L+G + L V A ER M+ Sbjct: 191 SKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 239 Score = 62.8 bits (151), Expect = 6e-09 Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 13/162 (8%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++G + ++ + L +F + G + + V +D T M G A++ + A +A L Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115 Query: 473 N---FTPVNGKPIRIMYSN----------RDPSSRKSGAANIFIKNLDKSIDNKALYDTF 613 + P +PI++ ++ R P S+ +F+ L+K + F Sbjct: 116 HEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDR---KLFVGMLNKQQSEDDVRRLF 172 Query: 614 SAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNG 739 AFGNI C + G SKG FV+Y AQ AIN L+G Sbjct: 173 EAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHG 214 Score = 55.5 bits (132), Expect = 1e-06 Identities = 48/201 (23%), Positives = 89/201 (44%), Gaps = 8/201 (3%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVHAVEDL 1006 +++ + + E +LK LF FG I + V++ G + F+ + + A+ A L Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETA----DRNQGTNLYLKNLDGSVDD 1174 + +K R +Q+K + +S ++ +Q L++ L+ + Sbjct: 116 HEQK----------TLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSE 165 Query: 1175 DEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMV---GSKP 1345 D+ ++ LF FG I C ++R +G +KG FV + S +A A+ A++G S Sbjct: 166 DD-VRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSS 224 Query: 1346 LYVALAQRKEERRARLQAQFS 1408 L V A +ER R Q + Sbjct: 225 LVVKFADTDKERTMRRMQQMA 245 Score = 34.7 bits (78), Expect = 1.8 Identities = 26/86 (30%), Positives = 38/86 (44%) Frame = +2 Query: 1127 QGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRA 1306 +G NL++ +L D E L ++F FG FV+F + A A Sbjct: 419 EGCNLFIYHLPQEFGDAE-LMQMFLPFG-------------------FVSFDNPASAQTA 458 Query: 1307 LVAMNGKMVGSKPLYVALAQRKEERR 1384 + AMNG +G K L V L + K+ R Sbjct: 459 IQAMNGFQIGMKRLKVQLKRPKDANR 484 Score = 32.3 bits (72), Expect = 9.0 Identities = 23/90 (25%), Positives = 41/90 (45%) Frame = +2 Query: 773 PFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCF 952 P + +Q+RE P+ N+++ +L + + L ++F F Sbjct: 408 PMIPQQQREG----PEGCNLFIYHLPQEFGDAELMQMF-------------------LPF 444 Query: 953 GFVNFENPDDAVHAVEDLNGKKFDDKELYV 1042 GFV+F+NP A A++ +NG + K L V Sbjct: 445 GFVSFDNPASAQTAIQAMNGFQIGMKRLKV 474
>Q7TSY6:CELF4_MOUSE CUG-BP- and ETR-3-like factor 4 - Mus musculus (Mouse)| Length = 486 Score = 62.8 bits (151), Expect = 6e-09 Identities = 62/229 (27%), Positives = 103/229 (44%), Gaps = 14/229 (6%) Frame = +2 Query: 434 SSPADAARALEMLNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTF 613 SSP A + L+ +P G P I + D A +FI + +++D K L F Sbjct: 25 SSPGSAGH-MNGLSHSP--GNPSTIPMKDHD-------AIKLFIGQIPRNLDEKDLKPLF 74 Query: 614 SAFGNILSCKVATE-MSGESKGYGFVQYEQDES---AQNAINELNGMLLNDKKVYVGPFV 781 FG I V + +G KG F+ Y + ES AQ+A++E + ++ + V P Sbjct: 75 EEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKP-- 132 Query: 782 RKQERENVFGS-------PKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGK 940 + E+ GS + ++V L++ +ED+++ LF FG I ++R DG Sbjct: 133 --ADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN 190 Query: 941 SRCFGFVNFENPDDAVHAVEDLNGKKF---DDKELYVGRAQKKSEREMQ 1078 S+ FV + + +A A+ L+G + L V A ER M+ Sbjct: 191 SKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 239 Score = 62.8 bits (151), Expect = 6e-09 Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 13/162 (8%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++G + ++ + L +F + G + + V +D T M G A++ + A +A L Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115 Query: 473 N---FTPVNGKPIRIMYSN----------RDPSSRKSGAANIFIKNLDKSIDNKALYDTF 613 + P +PI++ ++ R P S+ +F+ L+K + F Sbjct: 116 HEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDR---KLFVGMLNKQQSEDDVRRLF 172 Query: 614 SAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNG 739 AFGNI C + G SKG FV+Y AQ AIN L+G Sbjct: 173 EAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHG 214 Score = 55.5 bits (132), Expect = 1e-06 Identities = 48/201 (23%), Positives = 89/201 (44%), Gaps = 8/201 (3%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVHAVEDL 1006 +++ + + E +LK LF FG I + V++ G + F+ + + A+ A L Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETA----DRNQGTNLYLKNLDGSVDD 1174 + +K R +Q+K + +S ++ +Q L++ L+ + Sbjct: 116 HEQK----------TLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSE 165 Query: 1175 DEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMV---GSKP 1345 D+ ++ LF FG I C ++R +G +KG FV + S +A A+ A++G S Sbjct: 166 DD-VRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSS 224 Query: 1346 LYVALAQRKEERRARLQAQFS 1408 L V A +ER R Q + Sbjct: 225 LVVKFADTDKERTMRRMQQMA 245 Score = 33.1 bits (74), Expect = 5.3 Identities = 17/40 (42%), Positives = 23/40 (57%) Frame = +2 Query: 1265 GFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERR 1384 GFV+F + A A+ AMNG +G K L V L + K+ R Sbjct: 445 GFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANR 484
>Q9BZC1:CELF4_HUMAN CUG-BP- and ETR-3-like factor 4 - Homo sapiens (Human)| Length = 486 Score = 62.8 bits (151), Expect = 6e-09 Identities = 62/229 (27%), Positives = 103/229 (44%), Gaps = 14/229 (6%) Frame = +2 Query: 434 SSPADAARALEMLNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTF 613 SSP A + L+ +P G P I + D A +FI + +++D K L F Sbjct: 25 SSPGSAGH-MNGLSHSP--GNPSTIPMKDHD-------AIKLFIGQIPRNLDEKDLKPLF 74 Query: 614 SAFGNILSCKVATE-MSGESKGYGFVQYEQDES---AQNAINELNGMLLNDKKVYVGPFV 781 FG I V + +G KG F+ Y + ES AQ+A++E + ++ + V P Sbjct: 75 EEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKP-- 132 Query: 782 RKQERENVFGS-------PKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGK 940 + E+ GS + ++V L++ +ED+++ LF FG I ++R DG Sbjct: 133 --ADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGN 190 Query: 941 SRCFGFVNFENPDDAVHAVEDLNGKKF---DDKELYVGRAQKKSEREMQ 1078 S+ FV + + +A A+ L+G + L V A ER M+ Sbjct: 191 SKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMR 239 Score = 62.8 bits (151), Expect = 6e-09 Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 13/162 (8%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++G + ++ + L +F + G + + V +D T M G A++ + A +A L Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115 Query: 473 N---FTPVNGKPIRIMYSN----------RDPSSRKSGAANIFIKNLDKSIDNKALYDTF 613 + P +PI++ ++ R P S+ +F+ L+K + F Sbjct: 116 HEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDR---KLFVGMLNKQQSEDDVRRLF 172 Query: 614 SAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNG 739 AFGNI C + G SKG FV+Y AQ AIN L+G Sbjct: 173 EAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHG 214 Score = 55.5 bits (132), Expect = 1e-06 Identities = 48/201 (23%), Positives = 89/201 (44%), Gaps = 8/201 (3%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVHAVEDL 1006 +++ + + E +LK LF FG I + V++ G + F+ + + A+ A L Sbjct: 56 LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSAL 115 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETA----DRNQGTNLYLKNLDGSVDD 1174 + +K R +Q+K + +S ++ +Q L++ L+ + Sbjct: 116 HEQK----------TLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSE 165 Query: 1175 DEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMV---GSKP 1345 D+ ++ LF FG I C ++R +G +KG FV + S +A A+ A++G S Sbjct: 166 DD-VRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSS 224 Query: 1346 LYVALAQRKEERRARLQAQFS 1408 L V A +ER R Q + Sbjct: 225 LVVKFADTDKERTMRRMQQMA 245 Score = 34.7 bits (78), Expect = 1.8 Identities = 26/86 (30%), Positives = 38/86 (44%) Frame = +2 Query: 1127 QGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRA 1306 +G NL++ +L D E L ++F FG FV+F + A A Sbjct: 419 EGCNLFIYHLPQEFGDAE-LMQMFLPFG-------------------FVSFDNPASAQTA 458 Query: 1307 LVAMNGKMVGSKPLYVALAQRKEERR 1384 + AMNG +G K L V L + K+ R Sbjct: 459 IQAMNGFQIGMKRLKVQLKRPKDANR 484 Score = 32.3 bits (72), Expect = 9.0 Identities = 23/90 (25%), Positives = 41/90 (45%) Frame = +2 Query: 773 PFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCF 952 P + +Q+RE P+ N+++ +L + + L ++F F Sbjct: 408 PMIPQQQREG----PEGCNLFIYHLPQEFGDAELMQMF-------------------LPF 444 Query: 953 GFVNFENPDDAVHAVEDLNGKKFDDKELYV 1042 GFV+F+NP A A++ +NG + K L V Sbjct: 445 GFVSFDNPASAQTAIQAMNGFQIGMKRLKV 474
>Q62504:MINT_MOUSE Msx2-interacting protein - Mus musculus (Mouse)| Length = 3644 Score = 62.4 bits (150), Expect = 8e-09 Identities = 76/316 (24%), Positives = 125/316 (39%), Gaps = 23/316 (7%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L V +D S++D LF F + G V SV++ R Y V F D +AL Sbjct: 343 LPVRSIDTSLKDG-LFHEFKKFGKVTSVQIHGASEER----YGLVFFRQQEDQEKALTAS 397 Query: 473 NFTPVNGKPIRIM---------------YSNRDPSSRKSGAANIFIKNLDKSIDNKALYD 607 G I + R +FI NL+K+ L + Sbjct: 398 KGKLFFGMQIEVTAWVGPETESENEFRPLDERIDEFHPKATRTLFIGNLEKTTTYHDLRN 457 Query: 608 TFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRK 787 F FG I+ + +++G + Y F+QY S AI +++G L + ++ +G Sbjct: 458 IFQRFGEIVDIDIK-KVNGVPQ-YAFLQYCDIASVCKAIKKMDGEYLGNNRLKLG----- 510 Query: 788 QERENVFG-SPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVN 964 FG S N V++ LS + ++ L F +GP+ V+ R + V Sbjct: 511 ------FGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRL-----KGMALVL 559 Query: 965 FENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETAD-------R 1123 + +DA AV++ G+K ++ V A ++S ++ EKS ++ D R Sbjct: 560 YSEIEDAQAAVKETKGRKIGGNKIKVDFANRES--QLAFYHCMEKSGQDMRDFYEMLTER 617 Query: 1124 NQGTNLYLKNLDGSVD 1171 G K+ D S D Sbjct: 618 RAGQMAQSKHEDWSAD 633
>Q96DH6:MSI2H_HUMAN RNA-binding protein Musashi homolog 2 - Homo sapiens (Human)| Length = 328 Score = 62.0 bits (149), Expect = 1e-08 Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 10/187 (5%) Frame = +2 Query: 530 SSRKSGAAN--------IFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYG 682 S SG+AN +FI L +L D FS FG I C V + + S+G+G Sbjct: 6 SQGTSGSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFG 65 Query: 683 FVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTT 862 FV + S + + + L D K + P V R + ++V LS +T Sbjct: 66 FVTFADPASVDKVLGQPHHEL--DSKT-IDPKVAFPRRAQPKMVTRTKKIFVGGLSANTV 122 Query: 863 EDNLKELFGNFGPI-TSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELY 1039 +++K+ F FG + ++++ + R FGFV FEN +D V V +++ + ++K + Sbjct: 123 VEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFEN-EDVVEKVCEIHFHEINNKMVE 181 Query: 1040 VGRAQKK 1060 +AQ K Sbjct: 182 CKKAQPK 188 Score = 34.3 bits (77), Expect = 2.4 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 5/76 (6%) Frame = +2 Query: 1178 EKLKELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATRAL----VAMNGKMVGSK 1342 + L++ F++FG I C VMRD + ++G GFV F + L ++ K + K Sbjct: 35 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPK 94 Query: 1343 PLYVALAQRKEERRAR 1390 + AQ K R + Sbjct: 95 VAFPRRAQPKMVTRTK 110
>Q6DGV1:CELF4_DANRE CUG-BP- and ETR-3-like factor 4 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 520 Score = 62.0 bits (149), Expect = 1e-08 Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 4/161 (2%) Frame = +2 Query: 548 AANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFVQYEQDES---AQ 715 A +FI + +++D K L F FG I V + +G KG F+ Y ES AQ Sbjct: 46 AIKLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQ 105 Query: 716 NAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNF 895 A++E + ++ + V P + E+ ++V L++ ED+++ LF +F Sbjct: 106 TALHEQKTLPGMNRPIQVKPADSESRGED-------RKLFVGMLNKQQCEDDVRRLFESF 158 Query: 896 GPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKK 1018 G I ++R DG S+ FV + +A A+ L+G + Sbjct: 159 GSIEECTILRGPDGNSKGCAFVKYSTHAEAQAAISALHGSQ 199 Score = 58.9 bits (141), Expect = 9e-08 Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 3/152 (1%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++G + ++ + L +F + G + + V +D T M G A++ + + A +A L Sbjct: 49 LFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQTAL 108 Query: 473 N---FTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCK 643 + P +PI++ ++ S + +F+ L+K + F +FG+I C Sbjct: 109 HEQKTLPGMNRPIQVKPAD---SESRGEDRKLFVGMLNKQQCEDDVRRLFESFGSIEECT 165 Query: 644 VATEMSGESKGYGFVQYEQDESAQNAINELNG 739 + G SKG FV+Y AQ AI+ L+G Sbjct: 166 ILRGPDGNSKGCAFVKYSTHAEAQAAISALHG 197 Score = 53.5 bits (127), Expect = 4e-06 Identities = 46/197 (23%), Positives = 88/197 (44%), Gaps = 4/197 (2%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVHAVEDL 1006 +++ + + E +L+ LF FG I + V++ G + F+ + + A+ A L Sbjct: 49 LFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQTAL 108 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 + +K R +Q+K + +S R + L++ L+ +D+ + Sbjct: 109 HEQK----------TLPGMNRPIQVKPADSES------RGEDRKLFVGMLNKQQCEDD-V 151 Query: 1187 KELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMV---GSKPLYVA 1357 + LF FG+I C ++R +G +KG FV + + +A A+ A++G S L V Sbjct: 152 RRLFESFGSIEECTILRGPDGNSKGCAFVKYSTHAEAQAAISALHGSQTMPGASSSLVVK 211 Query: 1358 LAQRKEERRARLQAQFS 1408 A +ER R Q + Sbjct: 212 FADTDKERTIRRMQQMA 228 Score = 53.1 bits (126), Expect = 5e-06 Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 2/92 (2%) Frame = +2 Query: 773 PFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITS--VIVVRADDGKSR 946 P + +Q+RE P+ N+++ +L + + L ++F FG + S V V RA + +S+ Sbjct: 422 PIIPQQQREG----PEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDRATN-QSK 476 Query: 947 CFGFVNFENPDDAVHAVEDLNGKKFDDKELYV 1042 CFGFV+F+NP A A++ +NG + K L V Sbjct: 477 CFGFVSFDNPGSAQAAIQSMNGFQIGMKRLKV 508 Score = 50.1 bits (118), Expect = 4e-05 Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 3/84 (3%) Frame = +2 Query: 527 PSSRKSG--AANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMS-GESKGYGFVQYE 697 P ++ G N+FI +L + + L F FGN++S KV + + +SK +GFV ++ Sbjct: 425 PQQQREGPEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFD 484 Query: 698 QDESAQNAINELNGMLLNDKKVYV 769 SAQ AI +NG + K++ V Sbjct: 485 NPGSAQAAIQSMNGFQIGMKRLKV 508 Score = 49.3 bits (116), Expect = 7e-05 Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 1/87 (1%) Frame = +2 Query: 1127 QGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATR 1303 +G NL++ +L D E L ++F FG + S KV D + +K GFV+F + A Sbjct: 433 EGCNLFIYHLPQEFGDGE-LMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPGSAQA 491 Query: 1304 ALVAMNGKMVGSKPLYVALAQRKEERR 1384 A+ +MNG +G K L V L + K+ R Sbjct: 492 AIQSMNGFQIGMKRLKVQLKRPKDANR 518
>Q8CIN6:CELF3_MOUSE CUG-BP- and ETR-3-like factor 3 - Mus musculus (Mouse)| Length = 465 Score = 62.0 bits (149), Expect = 1e-08 Identities = 41/151 (27%), Positives = 70/151 (46%), Gaps = 3/151 (1%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L+VG + +++ L +F Q G + + V +D T + G A++ + + A +A L Sbjct: 9 LFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSAL 68 Query: 473 N---FTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCK 643 + P +PI++ + S G +F+ L K ++ + F FG I C Sbjct: 69 HEQKTLPGMNRPIQV----KPADSESRGDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECT 124 Query: 644 VATEMSGESKGYGFVQYEQDESAQNAINELN 736 V G SKG FV+++ AQ AIN L+ Sbjct: 125 VLRGPDGTSKGCAFVKFQTHAEAQAAINTLH 155 Score = 57.4 bits (137), Expect = 3e-07 Identities = 49/200 (24%), Positives = 84/200 (42%), Gaps = 4/200 (2%) Frame = +2 Query: 815 PKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVH 991 P ++V + E +LK +F FG I + V++ G + F+ + D A+ Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63 Query: 992 AVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVD 1171 A L+ +K R +Q+K + +S +G + G Sbjct: 64 AQSALHEQK----------TLPGMNRPIQVKPADSES--------RGDRKLFVGMLGKQQ 105 Query: 1172 DDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMV---GSK 1342 DE ++++F FGTI C V+R +G +KG FV F++ +A A+ ++ S Sbjct: 106 TDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASS 165 Query: 1343 PLYVALAQRKEERRARLQAQ 1402 L V A ++ER R Q Sbjct: 166 SLVVKFADTEKERGLRRMQQ 185 Score = 52.8 bits (125), Expect = 6e-06 Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 1/135 (0%) Frame = +2 Query: 983 AVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDG 1162 A A L F V + ++ Q ++ ++ ++ + G N+++ +L Sbjct: 330 AYPAAYSLVAPAFPQPPALVAQQPPPPPQQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQ 389 Query: 1163 SVDDDEKLKELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGS 1339 D E L ++F FG + S KV D + +K GFV+F + A A+ AMNG +G Sbjct: 390 EFTDSEIL-QMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGM 448 Query: 1340 KPLYVALAQRKEERR 1384 K L V L + K+ R Sbjct: 449 KRLKVQLKRPKDANR 463 Score = 52.0 bits (123), Expect = 1e-05 Identities = 29/89 (32%), Positives = 53/89 (59%), Gaps = 2/89 (2%) Frame = +2 Query: 782 RKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITS--VIVVRADDGKSRCFG 955 ++Q+++ P N+++ +L + T+ + ++F FG + S V V RA + +S+CFG Sbjct: 366 QQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATN-QSKCFG 424 Query: 956 FVNFENPDDAVHAVEDLNGKKFDDKELYV 1042 FV+F+NP A A++ +NG + K L V Sbjct: 425 FVSFDNPASAQAAIQAMNGFQIGMKRLKV 453 Score = 48.1 bits (113), Expect = 2e-04 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 1/73 (1%) Frame = +2 Query: 554 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMS-GESKGYGFVQYEQDESAQNAINE 730 NIFI +L + + + F FG+++S KV + + +SK +GFV ++ SAQ AI Sbjct: 381 NIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQA 440 Query: 731 LNGMLLNDKKVYV 769 +NG + K++ V Sbjct: 441 MNGFQIGMKRLKV 453
>Q15020:SART3_HUMAN Squamous cell carcinoma antigen recognized by T-cells 3 - Homo| sapiens (Human) Length = 963 Score = 61.6 bits (148), Expect = 1e-08 Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 11/170 (6%) Frame = +2 Query: 293 LYVGDLDVSVQ--DAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALE 466 ++V +L S+Q D +L +F G VV +R N GY YV F A +ALE Sbjct: 706 VFVSNLPYSMQEPDTKLRPLFEACGEVVQIRPIFS-NRGDFRGYCYVEFKEEKSALQALE 764 Query: 467 MLNFTPVNGKPIRI---MYSNRDPS------SRKSGAANIFIKNLDKSIDNKALYDTFSA 619 M + V G+P+ + + +++P S +FI L S + L + A Sbjct: 765 M-DRKSVEGRPMFVSPCVDKSKNPDFKVFRYSTSLEKHKLFISGLPFSCTKEELEEICKA 823 Query: 620 FGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYV 769 G + ++ T +G+ KG +V+YE + A A+ +++GM + + + V Sbjct: 824 HGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMKMDGMTIKENIIKV 873 Score = 51.2 bits (121), Expect = 2e-05 Identities = 45/190 (23%), Positives = 90/190 (47%), Gaps = 9/190 (4%) Frame = +2 Query: 830 VYVKNLSESTTEDN--LKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVED 1003 V+V NL S E + L+ LF G + + + ++ G R + +V F+ A+ A+E Sbjct: 706 VFVSNLPYSMQEPDTKLRPLFEACGEVVQIRPIFSNRGDFRGYCYVEFKEEKSALQALE- 764 Query: 1004 LNGKKFDDKELYVGRAQKKSE----REMQLKESFEKSNKETADRNQGTNLYLKNLDGSVD 1171 ++ K + + ++V KS+ + + S EK L++ L S Sbjct: 765 MDRKSVEGRPMFVSPCVDKSKNPDFKVFRYSTSLEKHK-----------LFISGLPFSCT 813 Query: 1172 DDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLY 1351 +E L+E+ GT+ +++ + G KG +V +++ A++A++ M+G + + Sbjct: 814 KEE-LEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMKMDGMTIKENIIK 872 Query: 1352 VALA---QRK 1372 VA++ QRK Sbjct: 873 VAISNPPQRK 882
>Q6IQ97:RBM4_DANRE RNA-binding protein 4 - Danio rerio (Zebrafish) (Brachydanio rerio)| Length = 419 Score = 61.6 bits (148), Expect = 1e-08 Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 1/163 (0%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 IF+ NL + + + FS +G I C + K +GFV + A AI L+ Sbjct: 4 IFVGNLSPNTTAEEIRSLFSQYGKISECDIV-------KNFGFVHMDSKSEADEAIQNLH 56 Query: 737 GMLLNDKKVYVGPFVRKQERENVFGSPKFNN-VYVKNLSESTTEDNLKELFGNFGPITSV 913 +LN + V E G PK + ++V N+S S T L+ F +GP+ Sbjct: 57 HYMLNGMAMNV---------EMSKGKPKTSTKLHVGNISSSCTNQELRAKFEEYGPVVEC 107 Query: 914 IVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYV 1042 +V+ + FV+ E +DA+ A+ L+ F K + V Sbjct: 108 DIVKD-------YAFVHMERVEDAMEAISGLDNTAFQGKLMSV 143
>Q5ZI72:HNRDL_CHICK Heterogeneous nuclear ribonucleoprotein D-like - Gallus gallus| (Chicken) Length = 301 Score = 61.6 bits (148), Expect = 1e-08 Identities = 52/223 (23%), Positives = 97/223 (43%), Gaps = 15/223 (6%) Frame = +2 Query: 515 SNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFVQ 691 S + S + +FI L K L + S FG ++ C + T+ ++G S+G+GFV Sbjct: 18 SKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVL 77 Query: 692 YEQDESAQNAI----NELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSEST 859 ++ S + + ++L+G L++ K+ + + G V+V LS T Sbjct: 78 FKDAASVEKVLELKEHKLDGKLIDPKRA-----------KALKGKEPPKKVFVGGLSPDT 126 Query: 860 TEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHAVED---------LN 1009 +E+ +KE FG FG I ++ + + + R F F+ + + + +E Sbjct: 127 SEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCE 186 Query: 1010 GKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTN 1138 K KE+Y R Q++ ++ + S + R QG N Sbjct: 187 IKVAQPKEVY--RQQQQQQKGGKSNASGGRGGGRGRGRGQGQN 227
>Q8N6W0:CELF5_HUMAN CUG-BP- and ETR-3-like factor 5 - Homo sapiens (Human)| Length = 485 Score = 61.6 bits (148), Expect = 1e-08 Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 3/152 (1%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNF---SSPADAARAL 463 L+VG + + + L +F Q G + + V +D T M G A++ + S A AL Sbjct: 47 LFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTAL 106 Query: 464 EMLNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCK 643 P +PI++ + D SR +F+ L+K + + F FG I C Sbjct: 107 HEQKTLPGMARPIQVKPA--DSESRGGRDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECT 164 Query: 644 VATEMSGESKGYGFVQYEQDESAQNAINELNG 739 V G SKG FV++ AQ AI+ L+G Sbjct: 165 VLRGPDGSSKGCAFVKFSSHTEAQAAIHALHG 196 Score = 55.8 bits (133), Expect = 8e-07 Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 4/195 (2%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVHAVEDL 1006 ++V + E +LK LF FG I + V++ G + F+ + D A+ A L Sbjct: 47 LFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAFLTYCARDSAIKAQTAL 106 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 + +K G A R +Q+K + + ++ DR L++ L+ +++ L Sbjct: 107 HEQK-----TLPGMA-----RPIQVKPA-DSESRGGRDRK----LFVGMLNKQQSEEDVL 151 Query: 1187 KELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMV---GSKPLYVA 1357 + LF FG I C V+R +G +KG FV F S +A A+ A++G S L V Sbjct: 152 R-LFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVK 210 Query: 1358 LAQRKEERRARLQAQ 1402 A +ER R Q Sbjct: 211 FADTDKERTLRRMQQ 225 Score = 51.6 bits (122), Expect = 1e-05 Identities = 32/92 (34%), Positives = 55/92 (59%), Gaps = 2/92 (2%) Frame = +2 Query: 773 PFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITS--VIVVRADDGKSR 946 P +++Q+RE P+ N+++ +L + + L ++F FG I S V + RA + +S+ Sbjct: 387 PLLQQQQREG----PEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATN-QSK 441 Query: 947 CFGFVNFENPDDAVHAVEDLNGKKFDDKELYV 1042 CFGFV+F+NP A A++ +NG + K L V Sbjct: 442 CFGFVSFDNPASAQAAIQAMNGFQIGMKRLKV 473 Score = 50.4 bits (119), Expect = 3e-05 Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 1/84 (1%) Frame = +2 Query: 1127 QGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATR 1303 +G NL++ +L D E L ++F FG I S KV D + +K GFV+F + A Sbjct: 398 EGCNLFIYHLPQEFGDTE-LTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQA 456 Query: 1304 ALVAMNGKMVGSKPLYVALAQRKE 1375 A+ AMNG +G K L V L + K+ Sbjct: 457 AIQAMNGFQIGMKRLKVQLKRPKD 480 Score = 48.9 bits (115), Expect = 9e-05 Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 1/73 (1%) Frame = +2 Query: 554 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMS-GESKGYGFVQYEQDESAQNAINE 730 N+FI +L + + L F FGNI+S KV + + +SK +GFV ++ SAQ AI Sbjct: 401 NLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQA 460 Query: 731 LNGMLLNDKKVYV 769 +NG + K++ V Sbjct: 461 MNGFQIGMKRLKV 473
>Q22037:ROA1_CAEEL Heterogeneous nuclear ribonucleoprotein A1 - Caenorhabditis elegans| Length = 346 Score = 61.2 bits (147), Expect = 2e-08 Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 6/189 (3%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGK-SRCFGFVNFENPDDAVHAVED- 1003 ++V L+ +TT+D ++E + FG IT +IV+R K SR FGFV F + A++ Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR 84 Query: 1004 ---LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDD 1174 ++GK D K + +SE + K + +E Sbjct: 85 PHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVRED------------------HT 126 Query: 1175 DEKLKELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLY 1351 ++ L E F ++GT+T +++ D + +G GFV F D+ V MV Sbjct: 127 EDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTF-DDHDSVDQCVLQKSHMVNGHRCD 185 Query: 1352 VALAQRKEE 1378 V K+E Sbjct: 186 VRKGLSKDE 194 Score = 55.8 bits (133), Expect = 8e-07 Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 14/197 (7%) Frame = +2 Query: 524 DPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGE-SKGYGFVQY-- 694 D S IF+ L + + + + +S FG I V + + + S+G+GFV + Sbjct: 14 DASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSG 73 Query: 695 --EQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTED 868 E D + + + ++G ++ K+ V + ++ + +YV + E TED Sbjct: 74 KTEVDAAMKQRPHIIDGKTVDPKRA-----VPRDDKNRSESNVSTKRLYVSGVREDHTED 128 Query: 869 NLKELFGNFGPIT-SVIVVRADDGKSRCFGFVNFENPDDAVHAV----EDLNGKKFDDKE 1033 L E F +G +T S I++ K R FGFV F++ D V +NG + D ++ Sbjct: 129 MLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRK 188 Query: 1034 LY----VGRAQKKSERE 1072 + +AQ +RE Sbjct: 189 GLSKDEMSKAQMNRDRE 205 Score = 52.8 bits (125), Expect = 6e-06 Identities = 29/156 (18%), Positives = 73/156 (46%), Gaps = 5/156 (3%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 ++VG L + D + + +SQ G + + V RD T+ S G+ +V FS + A++ Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR 84 Query: 473 NFTPVNGKPI----RIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSC 640 ++GK + + +++ S +++ + + L + F+ +G + Sbjct: 85 PHI-IDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKS 143 Query: 641 KVATEMSGES-KGYGFVQYEQDESAQNAINELNGML 745 ++ + + + +G+GFV ++ +S + + + M+ Sbjct: 144 EIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMV 179
>Q9JII5:DAZP1_MOUSE DAZ-associated protein 1 - Mus musculus (Mouse)| Length = 406 Score = 61.2 bits (147), Expect = 2e-08 Identities = 44/175 (25%), Positives = 81/175 (46%), Gaps = 17/175 (9%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMS-GESKGYGFVQYEQDESAQNAI--- 724 +F+ LD S + L FS +G ++ C + + + +S+G+GFV+++ + Sbjct: 12 LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASR 71 Query: 725 -NELNGMLLNDKKVYVGPFVRKQERENV-------FGSPKFNNVYVKNLSESTTEDNLKE 880 + L+G ++ K ++ R S K N ++V + + E L+E Sbjct: 72 PHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETELRE 131 Query: 881 LFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHAV----EDLNGKKFDDK 1030 F FG +T V+++ A+ + R FGF+ FE+ AV D+ GKK + K Sbjct: 132 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVK 186 Score = 57.4 bits (137), Expect = 3e-07 Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 16/161 (9%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSP-------ADA 451 L+VG LD S L FSQ G VV + +D T S G+ +V F P A Sbjct: 12 LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASR 71 Query: 452 ARALEMLNF-----TPVNGKPIRIMYS---NRDPSSRKSGAANIFIKNLDKSIDNKALYD 607 L+ N TP +P R + P S S + IF+ + + L + Sbjct: 72 PHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETELRE 131 Query: 608 TFSAFGNILSCKVATEMSGE-SKGYGFVQYEQDESAQNAIN 727 F FG + + + + +G+GF+ +E ++S A+N Sbjct: 132 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 172
>O93235:CIRBP_XENLA Cold-inducible RNA-binding protein - Xenopus laevis (African clawed| frog) Length = 163 Score = 61.2 bits (147), Expect = 2e-08 Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 1/79 (1%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGK-SRCFGFVNFENPDDAVHAVEDL 1006 +++ L+ T ED L++ F +G I+ V+VV+ + K SR FGFV FEN DDA A+ + Sbjct: 7 LFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMAM 66 Query: 1007 NGKKFDDKELYVGRAQKKS 1063 NGK D +++ V +A K S Sbjct: 67 NGKSVDGRQIRVDQAGKSS 85 Score = 44.3 bits (103), Expect = 0.002 Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 1/83 (1%) Frame = +2 Query: 1139 LYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGV-NKGSGFVAFKSSEDATRALVA 1315 L++ L+ ++D L++ F ++G I+ V++D ++G GFV F++ +DA A++A Sbjct: 7 LFIGGLNFETNED-CLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMA 65 Query: 1316 MNGKMVGSKPLYVALAQRKEERR 1384 MNGK V + + V A + R Sbjct: 66 MNGKSVDGRQIRVDQAGKSSGER 88 Score = 37.4 bits (85), Expect = 0.28 Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 1/77 (1%) Frame = +2 Query: 542 SGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGE-SKGYGFVQYEQDESAQN 718 S +FI L+ + L F+ +G I V + + S+G+GFV +E + A++ Sbjct: 2 SDEGKLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKD 61 Query: 719 AINELNGMLLNDKKVYV 769 A+ +NG ++ +++ V Sbjct: 62 AMMAMNGKSVDGRQIRV 78
>Q96EP5:DAZP1_HUMAN DAZ-associated protein 1 - Homo sapiens (Human)| Length = 407 Score = 60.8 bits (146), Expect = 2e-08 Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 18/176 (10%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMS-GESKGYGFVQYEQDESAQNAINEL 733 +F+ LD S + L FS +G ++ C + + + +S+G+GFV+++ D + + Sbjct: 12 LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFK-DPNCVGTVLAS 70 Query: 734 NGMLLNDKKVYVGPFV-------RKQERENVFGSP-----KFNNVYVKNLSESTTEDNLK 877 L+ + + P R + +E P K N ++V + + E L+ Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELR 130 Query: 878 ELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHAV----EDLNGKKFDDK 1030 E F FG +T V+++ A+ + R FGF+ FE+ AV D+ GKK + K Sbjct: 131 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVK 186 Score = 57.4 bits (137), Expect = 3e-07 Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 16/161 (9%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSP-------ADA 451 L+VG LD S L FSQ G VV + +D T S G+ +V F P A Sbjct: 12 LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASR 71 Query: 452 ARALEMLNF-----TPVNGKPIRIMYS---NRDPSSRKSGAANIFIKNLDKSIDNKALYD 607 L+ N TP +P R + P S S + IF+ + + L + Sbjct: 72 PHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELRE 131 Query: 608 TFSAFGNILSCKVATEMSGE-SKGYGFVQYEQDESAQNAIN 727 F FG + + + + +G+GF+ +E ++S A+N Sbjct: 132 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 172
>P90978:U2AF2_CAEEL Splicing factor U2AF 65 kDa subunit - Caenorhabditis elegans| Length = 496 Score = 60.5 bits (145), Expect = 3e-08 Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 16/189 (8%) Frame = +2 Query: 824 NNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVED 1003 N +++ L TED +KEL +FGP+ + + G S+ + F + +P A+ Sbjct: 291 NKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAG 350 Query: 1004 LNGKKFDDKELYVGRAQKKSERE-------------MQLKESFEKSNKETADRNQGTNLY 1144 LNG + DK+L V A +R + L + ++ + N T Sbjct: 351 LNGMQLGDKQLVVQLACANQQRHNTNLPNSASAIAGIDLSQGAGRATEILCLMNMVTEDE 410 Query: 1145 LKNLDGSVDDDEKLKELFAEFGTITSCKVMR---DSNGVNKGSGFVAFKSSEDATRALVA 1315 LK D + E +++ +++G + S ++ R D G FV F S+ D RA A Sbjct: 411 LKADDEYEEILEDVRDECSKYGIVRSLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAA 470 Query: 1316 MNGKMVGSK 1342 + G+ ++ Sbjct: 471 LTGRKFANR 479 Score = 52.4 bits (124), Expect = 8e-06 Identities = 68/297 (22%), Positives = 115/297 (38%), Gaps = 51/297 (17%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVS--------VRVCRDVNTRMSLGYAYVNFSS--P 442 LYVG++ + + D F+Q + + +C+ + +A++ F S Sbjct: 186 LYVGNIPFGCNEEAMLDFFNQQMHLCGLAQAPGNPILLCQ---INLDKNFAFIEFRSIDE 242 Query: 443 ADAARALEMLNFT--------PVNGKPIRIMY--SNRDPSSR--KSGAANIFIKNLDKSI 586 A A + +NF P + +P + + ++R P S A IFI L + Sbjct: 243 TTAGMAFDGINFMGQQLKVRRPRDYQPSQNTFDMNSRMPVSTIVVDSANKIFIGGLPNYL 302 Query: 587 DNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVY 766 + + +FG + + + + G SKGY F +Y AI LNGM L DK++ Sbjct: 303 TEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLV 362 Query: 767 VGPFVRKQERENVFGSPKFNNVYVKNLSES-------------TTEDNLK---------- 877 V Q+R N + + +LS+ TED LK Sbjct: 363 VQLACANQQRHNTNLPNSASAIAGIDLSQGAGRATEILCLMNMVTEDELKADDEYEEILE 422 Query: 878 ---ELFGNFGPITSVIVVRA-DDGKSRCFG--FVNFENPDDAVHAVEDLNGKKFDDK 1030 + +G + S+ + R +D G FV F + D A L G+KF ++ Sbjct: 423 DVRDECSKYGIVRSLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAALTGRKFANR 479 Score = 47.8 bits (112), Expect = 2e-04 Identities = 47/216 (21%), Positives = 91/216 (42%), Gaps = 11/216 (5%) Frame = +2 Query: 767 VGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNF--------GPITSVIVV 922 VGP V Q R +YV N+ E+ + + F P +++ Sbjct: 175 VGPSVTCQSRR----------LYVGNIPFGCNEEAMLDFFNQQMHLCGLAQAPGNPILLC 224 Query: 923 RADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKS 1102 + + K+ F F+ F + D+ + +G F ++L V R + + +F+ + Sbjct: 225 QINLDKN--FAFIEFRSIDETTAGMA-FDGINFMGQQLKVRRPRDYQPSQ----NTFDMN 277 Query: 1103 NK---ETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFV 1273 ++ T + +++ L + +D+ +KEL FG + + + DS G +KG F Sbjct: 278 SRMPVSTIVVDSANKIFIGGLPNYLTEDQ-VKELLCSFGPLKAFSLNVDSQGNSKGYAFA 336 Query: 1274 AFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEER 1381 + +A+ +NG +G K L V LA ++R Sbjct: 337 EYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQR 372
>P48809:RB27C_DROME Heterogeneous nuclear ribonucleoprotein 27C - Drosophila melanogaster| (Fruit fly) Length = 421 Score = 60.5 bits (145), Expect = 3e-08 Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 10/181 (5%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRADD-GKSRCFGFVNFENPDDAVHAVED- 1003 ++V LS TT++NL F FG I +V++ ++ G+SR FGFV F +P + H +++ Sbjct: 9 LFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNG 68 Query: 1004 ---LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDD 1174 L+G+ D K QK + G ++L L +V + Sbjct: 69 PHTLDGRTIDPKPCNPRTLQKPK-------------------KGGGYKVFLGGLPSNVTE 109 Query: 1175 DEKLKELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSED----ATRALVAMNGKMVGS 1339 + L+ F +G +T +M D ++G GF++F+ + +NGK V Sbjct: 110 TD-LRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEI 168 Query: 1340 K 1342 K Sbjct: 169 K 169 Score = 55.1 bits (131), Expect = 1e-06 Identities = 41/184 (22%), Positives = 81/184 (44%), Gaps = 5/184 (2%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALE-- 466 L+VG L L F + G ++ V ++ + S G+ +V F+ P + L+ Sbjct: 9 LFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNG 68 Query: 467 --MLNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSC 640 L+ ++ KP + +K G +F+ L ++ L F+ +G + Sbjct: 69 PHTLDGRTIDPKPCNPRTLQKP---KKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEV 125 Query: 641 KVATEMSGE-SKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSP 817 + + + S+G+GF+ +E++ S ++ NE + LN K+V ++K E + G Sbjct: 126 VIMYDQEKKKSRGFGFLSFEEESSVEHVTNE-RYINLNGKQVE----IKKAEPRDGSGGQ 180 Query: 818 KFNN 829 NN Sbjct: 181 NSNN 184
>P38159:HNRPG_HUMAN Heterogeneous nuclear ribonucleoprotein G - Homo sapiens (Human)| Length = 391 Score = 60.5 bits (145), Expect = 3e-08 Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 1/79 (1%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHAVEDL 1006 +++ L+ T E L+ +FG +G I V++++ + KSR F FV FE+P DA A D+ Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69 Query: 1007 NGKKFDDKELYVGRAQKKS 1063 NGK D K + V +A K S Sbjct: 70 NGKSLDGKAIKVEQATKPS 88 Score = 53.1 bits (126), Expect = 5e-06 Identities = 26/72 (36%), Positives = 41/72 (56%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++G L+ + L VF + G +V V + +D T S G+A+V F SPADA A + Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69 Query: 473 NFTPVNGKPIRI 508 N ++GK I++ Sbjct: 70 NGKSLDGKAIKV 81 Score = 40.8 bits (94), Expect = 0.025 Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYEQDESAQNAINEL 733 +FI L+ + KAL F +G I+ + + + +S+G+ FV +E A++A ++ Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69 Query: 734 NGMLLNDKKVYV 769 NG L+ K + V Sbjct: 70 NGKSLDGKAIKV 81
>Q29RT0:HNRPG_BOVIN Heterogeneous nuclear ribonucleoprotein G - Bos taurus (Bovine)| Length = 396 Score = 60.5 bits (145), Expect = 3e-08 Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 1/77 (1%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHAVEDL 1006 +++ L+ T E +L+ FG +G I+ V++++ + KSR F F+ FE+P DA AV D+ Sbjct: 10 LFIGGLNLETDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPADAKAAVRDM 69 Query: 1007 NGKKFDDKELYVGRAQK 1057 NGK D K + V +A K Sbjct: 70 NGKSLDGKAIKVAQATK 86 Score = 51.2 bits (121), Expect = 2e-05 Identities = 23/77 (29%), Positives = 43/77 (55%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++G L++ + L F + G + V + +D T S G+A++ F SPADA A+ + Sbjct: 10 LFIGGLNLETDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPADAKAAVRDM 69 Query: 473 NFTPVNGKPIRIMYSNR 523 N ++GK I++ + + Sbjct: 70 NGKSLDGKAIKVAQATK 86 Score = 42.0 bits (97), Expect = 0.011 Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYEQDESAQNAINEL 733 +FI L+ D K+L TF +G I + + + +S+G+ F+ +E A+ A+ ++ Sbjct: 10 LFIGGLNLETDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPADAKAAVRDM 69 Query: 734 NGMLLNDKKVYV 769 NG L+ K + V Sbjct: 70 NGKSLDGKAIKV 81
>Q640A2:HNRDL_XENTR Heterogeneous nuclear ribonucleoprotein D-like - Xenopus tropicalis| (Western clawed frog) (Silurana tropicalis) Length = 297 Score = 60.5 bits (145), Expect = 3e-08 Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 8/162 (4%) Frame = +2 Query: 515 SNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFVQ 691 S + S + +FI L K L + S FG ++ C + T+ ++G S+G+GFV Sbjct: 14 SKINASKNQQDEGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVL 73 Query: 692 YEQDESAQNAI----NELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSEST 859 ++ S + ++L+G L++ K+ + + G V+V LS T Sbjct: 74 FKDAVSVDKVLETKEHKLDGKLIDPKRA-----------KALKGKEPPKKVFVGGLSPET 122 Query: 860 TEDNLKELFGNFGPITSV---IVVRADDGKSRCFGFVNFENP 976 TE+ +K+ FG FG I ++ + + ++ + CF E P Sbjct: 123 TEEQIKQYFGGFGEIENIELPMDTKTNERRGFCFVTYTGEEP 164
>Q9JLI8:SART3_MOUSE Squamous cell carcinoma antigen recognized by T-cells 3 - Mus| musculus (Mouse) Length = 962 Score = 59.7 bits (143), Expect = 5e-08 Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 11/170 (6%) Frame = +2 Query: 293 LYVGDLDVSVQDAQ--LFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALE 466 ++V +L S+++ + L +F G VV +R N GY YV F A +ALE Sbjct: 706 VFVSNLPYSIEEPEVKLRPLFEVCGEVVQIRPIFS-NRGDFRGYCYVEFGEEKSAQQALE 764 Query: 467 MLNFTPVNGKPIRI---MYSNRDPS------SRKSGAANIFIKNLDKSIDNKALYDTFSA 619 L+ V G+P+ + + +++P S +FI L S + L D A Sbjct: 765 -LDRKIVEGRPMFVSPCVDKSKNPDFKVFRYSTTLEKHKLFISGLPFSCTKEELEDICKA 823 Query: 620 FGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYV 769 G + ++ T +G+ KG +V+YE + A A+ +++GM + + + V Sbjct: 824 HGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMKMDGMTIRENVIKV 873 Score = 46.6 bits (109), Expect = 5e-04 Identities = 55/239 (23%), Positives = 103/239 (43%), Gaps = 15/239 (6%) Frame = +2 Query: 701 DESAQNAINELNGMLLNDKKVYVGPFVRKQERENVF----------GSPKFNNVYVKNLS 850 + SA EL+G L + VGP +++E+ S V+V NL Sbjct: 656 EASAMKEETELSGKCLT---IDVGPPSKQKEKAASLKRDMPKVAHDSSKDSVTVFVSNLP 712 Query: 851 ESTTEDNLK--ELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFD 1024 S E +K LF G + + + ++ G R + +V F A A+E L+ K + Sbjct: 713 YSIEEPEVKLRPLFEVCGEVVQIRPIFSNRGDFRGYCYVEFGEEKSAQQALE-LDRKIVE 771 Query: 1025 DKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAE 1204 + ++V KS+ F+ T L++ L S +E L+++ Sbjct: 772 GRPMFVSPCVDKSKNP-----DFKVFRYSTTLEKH--KLFISGLPFSCTKEE-LEDICKA 823 Query: 1205 FGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALA---QRK 1372 GT+ +++ + G KG +V +++ A++A++ M+G + + VA++ QRK Sbjct: 824 HGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMKMDGMTIRENVIKVAISNPPQRK 882
>O89086:RBM3_MOUSE Putative RNA-binding protein 3 - Mus musculus (Mouse)| Length = 153 Score = 59.3 bits (142), Expect = 7e-08 Identities = 30/85 (35%), Positives = 52/85 (61%), Gaps = 1/85 (1%) Frame = +2 Query: 812 SPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAV 988 S + ++V L+ +T E L++ F +FGPI+ V+VV+ + +SR FGF+ F NP+ A Sbjct: 2 SSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHAS 61 Query: 989 HAVEDLNGKKFDDKELYVGRAQKKS 1063 A+ +NG+ D +++ V A K + Sbjct: 62 DAMRAMNGESLDGRQIRVDHAGKSA 86 Score = 45.4 bits (106), Expect = 0.001 Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 1/77 (1%) Frame = +2 Query: 542 SGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGE-SKGYGFVQYEQDESAQN 718 S +F+ L+ + D +AL D FS+FG I V + + S+G+GF+ + E A + Sbjct: 3 SEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASD 62 Query: 719 AINELNGMLLNDKKVYV 769 A+ +NG L+ +++ V Sbjct: 63 AMRAMNGESLDGRQIRV 79 Score = 40.0 bits (92), Expect = 0.043 Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 1/62 (1%) Frame = +2 Query: 1172 DDEKLKELFAEFGTITSCKVMRDSNGV-NKGSGFVAFKSSEDATRALVAMNGKMVGSKPL 1348 D++ L++ F+ FG I+ V++D ++G GF+ F + E A+ A+ AMNG+ + + + Sbjct: 18 DEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQI 77 Query: 1349 YV 1354 V Sbjct: 78 RV 79
>Q5XI28:RAVR1_RAT Ribonucleoprotein PTB-binding 1 - Rattus norvegicus (Rat)| Length = 748 Score = 59.3 bits (142), Expect = 7e-08 Identities = 68/300 (22%), Positives = 121/300 (40%), Gaps = 1/300 (0%) Frame = +2 Query: 503 RIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYG 682 R+ ++ R +R+ I I+ L + N+ ++D S + + C V + KG Sbjct: 47 RLEHTERQFRNRRK----ILIRGLPGDVTNQEVHDLLSDY-ELKYCFV-----DKYKGTA 96 Query: 683 FVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTT 862 FV E A+ AIN + L ++++ +V P + V NL S T Sbjct: 97 FVTLLNGEQAEAAINTFHQSRLREREL------------SVQLQPTDALLCVANLPPSLT 144 Query: 863 EDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELY 1039 + +EL FG + +V ++ G S+ +GF + D A A DL GK + LY Sbjct: 145 QAQFEELVRPFGSLERCFLVYSERTGHSKGYGFAEYMKKDSAARAKSDLLGKPLGPRTLY 204 Query: 1040 VGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTIT 1219 V + + + T L + +L +D + L++ + T T Sbjct: 205 V---------------HWTDAGQLTPALLHSRCLCVDHLPPGFNDVDALRQALSAVYTPT 249 Query: 1220 SCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRARLQA 1399 C++ +G KG + ++++E A A +G +G L V+ R+ L A Sbjct: 250 FCQLASGQDGQLKGFAVLEYETAEMAEAAQQRADGLALGGSHLRVSFCAPGPPGRSMLAA 309 Score = 45.1 bits (105), Expect = 0.001 Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 1/120 (0%) Frame = +2 Query: 413 GYAYVNFSSPADAARALEMLNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDN 592 G A+V + A A+ + + + + + + D A + + NL S+ Sbjct: 94 GTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQPTD--------ALLCVANLPPSLTQ 145 Query: 593 KALYDTFSAFGNILSC-KVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYV 769 + FG++ C V +E +G SKGYGF +Y + +SA A ++L G L + +YV Sbjct: 146 AQFEELVRPFGSLERCFLVYSERTGHSKGYGFAEYMKKDSAARAKSDLLGKPLGPRTLYV 205 Score = 43.5 bits (101), Expect = 0.004 Identities = 47/212 (22%), Positives = 84/212 (39%), Gaps = 5/212 (2%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L V +L S+ AQ ++ GS+ + T S GY + + AARA L Sbjct: 134 LCVANLPPSLTQAQFEELVRPFGSLERCFLVYSERTGHSKGYGFAEYMKKDSAARAKSDL 193 Query: 473 NFTPVNGKPIRIMYSNRD---PSSRKSGAANIFIKNLDKSI-DNKALYDTFSAFGNILSC 640 P+ + + + +++ P+ S + + +L D AL SA C Sbjct: 194 LGKPLGPRTLYVHWTDAGQLTPALLHSRC--LCVDHLPPGFNDVDALRQALSAVYTPTFC 251 Query: 641 KVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPK 820 ++A+ G+ KG+ ++YE E A+ A +G+ L + V ++ + Sbjct: 252 QLASGQDGQLKGFAVLEYETAEMAEAAQQRADGLALGGSHLRVSFCAPGPPGRSMLAALI 311 Query: 821 FNNVYVKNLSES-TTEDNLKELFGNFGPITSV 913 N + E N+ +L N GP S+ Sbjct: 312 AAQATALNRGKGLLPEPNILQLLNNLGPSASL 343
>Q9U1N0:HRP65_CHITE Hrp65 protein - Chironomus tentans (Midge)| Length = 535 Score = 59.3 bits (142), Expect = 7e-08 Identities = 37/144 (25%), Positives = 69/144 (47%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LY+G+L V + +L ++FS G + + + N +A++ A+A RA + L Sbjct: 115 LYIGNLTSDVTEEELKELFSPYGEISEAFINAEKN------FAFLKIDYRANAERAKKDL 168 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 + KPIRI ++ A I +KNL + N+ L+ +F FG + + Sbjct: 169 DGRMRKNKPIRIRFA--------PNATTIRVKNLTPFVSNELLFKSFEVFGQVERAVIIV 220 Query: 653 EMSGESKGYGFVQYEQDESAQNAI 724 + G++ G G V++ + A +A+ Sbjct: 221 DDRGKTTGEGIVEFARKSGAMSAL 244 Score = 52.0 bits (123), Expect = 1e-05 Identities = 35/153 (22%), Positives = 68/153 (44%) Frame = +2 Query: 542 SGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNA 721 SG ++I NL + + L + FS +G I + E K + F++ + +A+ A Sbjct: 110 SGRNRLYIGNLTSDVTEEELKELFSPYGEISEAFINAE-----KNFAFLKIDYRANAERA 164 Query: 722 INELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGP 901 +L+G + +K + + +P + VKNL+ + + L + F FG Sbjct: 165 KKDLDGRMRKNKPI------------RIRFAPNATTIRVKNLTPFVSNELLFKSFEVFGQ 212 Query: 902 ITSVIVVRADDGKSRCFGFVNFENPDDAVHAVE 1000 + +++ D GK+ G V F A+ A++ Sbjct: 213 VERAVIIVDDRGKTTGEGIVEFARKSGAMSALK 245 Score = 36.2 bits (82), Expect = 0.62 Identities = 23/75 (30%), Positives = 39/75 (52%) Frame = +2 Query: 1139 LYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAM 1318 LY+ NL V ++E LKELF+ +G I+ + + N F+ +A RA + Sbjct: 115 LYIGNLTSDVTEEE-LKELFSPYGEISEAFINAEKN-----FAFLKIDYRANAERAKKDL 168 Query: 1319 NGKMVGSKPLYVALA 1363 +G+M +KP+ + A Sbjct: 169 DGRMRKNKPIRIRFA 183
>Q9Z130:HNRDL_MOUSE Heterogeneous nuclear ribonucleoprotein D-like - Mus musculus (Mouse)| Length = 301 Score = 59.3 bits (142), Expect = 7e-08 Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 6/168 (3%) Frame = +2 Query: 515 SNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFVQ 691 S + S + +FI L K L + S FG ++ C + T+ ++G S+G+GFV Sbjct: 17 SKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVL 76 Query: 692 YEQDESAQNAI----NELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSEST 859 ++ S + ++L+G L++ K+ + + G V+V LS T Sbjct: 77 FKDAASVDKVLELKEHKLDGKLIDPKRA-----------KALKGKEPPKKVFVGGLSPDT 125 Query: 860 TEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHAVE 1000 +E+ +KE FG FG I ++ + + + R F F+ + + + +E Sbjct: 126 SEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLE 173
>O14979:HNRDL_HUMAN Heterogeneous nuclear ribonucleoprotein D-like - Homo sapiens (Human)| Length = 420 Score = 59.3 bits (142), Expect = 7e-08 Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 6/168 (3%) Frame = +2 Query: 515 SNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFVQ 691 S + S + +FI L K L + S FG ++ C + T+ ++G S+G+GFV Sbjct: 136 SKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVL 195 Query: 692 YEQDESAQNAI----NELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSEST 859 ++ S + ++L+G L++ K+ + + G V+V LS T Sbjct: 196 FKDAASVDKVLELKEHKLDGKLIDPKRA-----------KALKGKEPPKKVFVGGLSPDT 244 Query: 860 TEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHAVE 1000 +E+ +KE FG FG I ++ + + + R F F+ + + + +E Sbjct: 245 SEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLE 292
>Q5SZQ8:CELF3_HUMAN CUG-BP- and ETR-3-like factor 3 - Homo sapiens (Human)| Length = 465 Score = 59.3 bits (142), Expect = 7e-08 Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 3/151 (1%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L+VG + +++ L +F Q G + + V +D T + G A++ + + A +A L Sbjct: 9 LFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSAL 68 Query: 473 N---FTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCK 643 + P +PI++ ++ S + +F+ L K ++ + F FG I C Sbjct: 69 HEQKTLPGMNRPIQVKPAD---SESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECT 125 Query: 644 VATEMSGESKGYGFVQYEQDESAQNAINELN 736 V G SKG FV+++ AQ AIN L+ Sbjct: 126 VLRGPDGTSKGCAFVKFQTHAEAQAAINTLH 156 Score = 58.9 bits (141), Expect = 9e-08 Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 4/200 (2%) Frame = +2 Query: 815 PKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVH 991 P ++V + E +LK +F FG I + V++ G + F+ + D A+ Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63 Query: 992 AVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVD 1171 A L+ +K R +Q+K + +S R + L++ L G Sbjct: 64 AQSALHEQK----------TLPGMNRPIQVKPADSES------RGEDRKLFVGML-GKQQ 106 Query: 1172 DDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMV---GSK 1342 DE ++++F FGTI C V+R +G +KG FV F++ +A A+ ++ S Sbjct: 107 TDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASS 166 Query: 1343 PLYVALAQRKEERRARLQAQ 1402 L V A ++ER R Q Sbjct: 167 SLVVKFADTEKERGLRRMQQ 186 Score = 52.0 bits (123), Expect = 1e-05 Identities = 29/89 (32%), Positives = 53/89 (59%), Gaps = 2/89 (2%) Frame = +2 Query: 782 RKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITS--VIVVRADDGKSRCFG 955 ++Q+++ P N+++ +L + T+ + ++F FG + S V V RA + +S+CFG Sbjct: 366 QQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATN-QSKCFG 424 Query: 956 FVNFENPDDAVHAVEDLNGKKFDDKELYV 1042 FV+F+NP A A++ +NG + K L V Sbjct: 425 FVSFDNPASAQAAIQAMNGFQIGMKRLKV 453 Score = 51.6 bits (122), Expect = 1e-05 Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 1/106 (0%) Frame = +2 Query: 1070 EMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD-SN 1246 + Q ++ ++ ++ + G N+++ +L D E L ++F FG + S KV D + Sbjct: 359 QQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEIL-QMFVPFGHVISAKVFVDRAT 417 Query: 1247 GVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERR 1384 +K GFV+F + A A+ AMNG +G K L V L + K+ R Sbjct: 418 NQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANR 463 Score = 48.1 bits (113), Expect = 2e-04 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 1/73 (1%) Frame = +2 Query: 554 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMS-GESKGYGFVQYEQDESAQNAINE 730 NIFI +L + + + F FG+++S KV + + +SK +GFV ++ SAQ AI Sbjct: 381 NIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQA 440 Query: 731 LNGMLLNDKKVYV 769 +NG + K++ V Sbjct: 441 MNGFQIGMKRLKV 453
>Q08E07:CELF3_BOVIN CUG-BP- and ETR-3-like factor 3 - Bos taurus (Bovine)| Length = 461 Score = 59.3 bits (142), Expect = 7e-08 Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 3/151 (1%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L+VG + +++ L +F Q G + + V +D T + G A++ + + A +A L Sbjct: 9 LFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSAL 68 Query: 473 N---FTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCK 643 + P +PI++ ++ S + +F+ L K ++ + F FG I C Sbjct: 69 HEQKTLPGMNRPIQVKPAD---SESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECT 125 Query: 644 VATEMSGESKGYGFVQYEQDESAQNAINELN 736 V G SKG FV+++ AQ AIN L+ Sbjct: 126 VLRGPDGTSKGCAFVKFQTHAEAQAAINTLH 156 Score = 58.9 bits (141), Expect = 9e-08 Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 4/200 (2%) Frame = +2 Query: 815 PKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVH 991 P ++V + E +LK +F FG I + V++ G + F+ + D A+ Sbjct: 4 PDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALK 63 Query: 992 AVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVD 1171 A L+ +K R +Q+K + +S R + L++ L G Sbjct: 64 AQSALHEQK----------TLPGMNRPIQVKPADSES------RGEDRKLFVGML-GKQQ 106 Query: 1172 DDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMV---GSK 1342 DE ++++F FGTI C V+R +G +KG FV F++ +A A+ ++ S Sbjct: 107 TDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASS 166 Query: 1343 PLYVALAQRKEERRARLQAQ 1402 L V A ++ER R Q Sbjct: 167 SLVVKFADTEKERGLRRMQQ 186 Score = 52.0 bits (123), Expect = 1e-05 Identities = 29/89 (32%), Positives = 53/89 (59%), Gaps = 2/89 (2%) Frame = +2 Query: 782 RKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITS--VIVVRADDGKSRCFG 955 ++Q+++ P N+++ +L + T+ + ++F FG + S V V RA + +S+CFG Sbjct: 362 QQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATN-QSKCFG 420 Query: 956 FVNFENPDDAVHAVEDLNGKKFDDKELYV 1042 FV+F+NP A A++ +NG + K L V Sbjct: 421 FVSFDNPASAQAAIQAMNGFQIGMKRLKV 449 Score = 50.4 bits (119), Expect = 3e-05 Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 1/106 (0%) Frame = +2 Query: 1070 EMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD-SN 1246 + Q ++ ++ +E D G N+++ +L D E L ++F FG + S KV D + Sbjct: 358 QQQQQQQQQQQQREGPD---GCNIFIYHLPQEFTDSEIL-QMFVPFGHVISAKVFVDRAT 413 Query: 1247 GVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERR 1384 +K GFV+F + A A+ AMNG +G K L V L + K+ R Sbjct: 414 NQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANR 459 Score = 48.1 bits (113), Expect = 2e-04 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 1/73 (1%) Frame = +2 Query: 554 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMS-GESKGYGFVQYEQDESAQNAINE 730 NIFI +L + + + F FG+++S KV + + +SK +GFV ++ SAQ AI Sbjct: 377 NIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQA 436 Query: 731 LNGMLLNDKKVYV 769 +NG + K++ V Sbjct: 437 MNGFQIGMKRLKV 449
>Q13151:ROA0_HUMAN Heterogeneous nuclear ribonucleoprotein A0 - Homo sapiens (Human)| Length = 305 Score = 58.9 bits (141), Expect = 9e-08 Identities = 44/163 (26%), Positives = 79/163 (48%), Gaps = 2/163 (1%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITS-VIVVRADDGKSRCFGFVNFENPDDAVHAVEDL 1006 +++ L+ T+E L+ F FG +T V+VV +SRCFGFV + N ++A A Sbjct: 9 LFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA-DAAMAA 67 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 + D + + RA + + + + L++ L G V + + L Sbjct: 68 SPHAVDGNTVELKRAVSRED------------SARPGAHAKVKKLFVGGLKGDVAEGD-L 114 Query: 1187 KELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATRALV 1312 E F++FGT+ +++ D +G +G GFV F++ + A +A V Sbjct: 115 IEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAV 157 Score = 55.8 bits (133), Expect = 8e-07 Identities = 42/150 (28%), Positives = 62/150 (41%), Gaps = 2/150 (1%) Frame = +2 Query: 542 SGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFVQYEQDESAQN 718 S +FI L+ L F AFG + C V + S+ +GFV Y E A Sbjct: 4 SQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADA 63 Query: 719 AINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFG 898 A+ + ++ V + V +++ K ++V L E +L E F FG Sbjct: 64 AM-AASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFG 122 Query: 899 PITSV-IVVRADDGKSRCFGFVNFENPDDA 985 + I+ GK R FGFV F+N D A Sbjct: 123 TVEKAEIIADKQSGKKRGFGFVYFQNHDAA 152 Score = 38.9 bits (89), Expect = 0.096 Identities = 21/72 (29%), Positives = 35/72 (48%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L+VG L V + L + FSQ G+V + D + G+ +V F + DAA ++ Sbjct: 100 LFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQN-HDAADKAAVV 158 Query: 473 NFTPVNGKPIRI 508 F P+ G + + Sbjct: 159 KFHPIQGHRVEV 170
>A4IIM2:CELF2_XENTR CUG-BP- and ETR-3-like factor 2 - Xenopus tropicalis (Western| clawed frog) (Silurana tropicalis) Length = 513 Score = 58.9 bits (141), Expect = 9e-08 Identities = 45/156 (28%), Positives = 70/156 (44%), Gaps = 8/156 (5%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRD--VNTRMSLGYAYVNF---SSPADAAR 457 ++VG + S + +L D+F G+V + V RD N S G +V F + +A Sbjct: 37 MFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQN 96 Query: 458 ALEMLNFTPVNGKPIRIMYSNRDPSSRKSGAAN---IFIKNLDKSIDNKALYDTFSAFGN 628 AL + P PI++ + S KS A +FI + K + + FS FG Sbjct: 97 ALHNIKTLPGMHHPIQM----KPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 152 Query: 629 ILSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 I C++ G S+G FV + AQNAI ++ Sbjct: 153 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMH 188 Score = 51.6 bits (122), Expect = 1e-05 Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%) Frame = +2 Query: 533 SRKSG--AANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFVQYEQD 703 S+K G AN+FI +L + ++ + F FGN++S KV + + SK +GFV Y+ Sbjct: 420 SQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNP 479 Query: 704 ESAQNAINELNGMLLNDKKVYV 769 SAQ AI +NG + K++ V Sbjct: 480 VSAQAAIQAMNGFQIGMKRLKV 501 Score = 48.5 bits (114), Expect = 1e-04 Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 1/87 (1%) Frame = +2 Query: 1127 QGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSN-GVNKGSGFVAFKSSEDATR 1303 +G NL++ +L D + L ++F FG + S KV D ++K GFV++ + A Sbjct: 426 EGANLFIYHLPQEFGDQDIL-QMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQA 484 Query: 1304 ALVAMNGKMVGSKPLYVALAQRKEERR 1384 A+ AMNG +G K L V L + K + + Sbjct: 485 AIQAMNGFQIGMKRLKVQLKRSKNDSK 511 Score = 47.0 bits (110), Expect = 4e-04 Identities = 23/85 (27%), Positives = 48/85 (56%), Gaps = 1/85 (1%) Frame = +2 Query: 815 PKFNNVYVKNLSESTTEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVH 991 P+ N+++ +L + + ++ ++F FG + S + + S+CFGFV+++NP A Sbjct: 425 PEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQA 484 Query: 992 AVEDLNGKKFDDKELYVGRAQKKSE 1066 A++ +NG + K L V + K++ Sbjct: 485 AIQAMNGFQIGMKRLKVQLKRSKND 509
>Q7ZXE2:CELF2_XENLA CUG-BP- and ETR-3-like factor 2 - Xenopus laevis (African clawed| frog) Length = 536 Score = 58.9 bits (141), Expect = 9e-08 Identities = 45/156 (28%), Positives = 70/156 (44%), Gaps = 8/156 (5%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRD--VNTRMSLGYAYVNF---SSPADAAR 457 ++VG + S + +L D+F G+V + V RD N S G +V F + +A Sbjct: 60 MFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQN 119 Query: 458 ALEMLNFTPVNGKPIRIMYSNRDPSSRKSGAAN---IFIKNLDKSIDNKALYDTFSAFGN 628 AL + P PI++ + S KS A +FI + K + + FS FG Sbjct: 120 ALHNIKTLPGMHHPIQM----KPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 175 Query: 629 ILSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 I C++ G S+G FV + AQNAI ++ Sbjct: 176 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMH 211 Score = 51.6 bits (122), Expect = 1e-05 Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%) Frame = +2 Query: 533 SRKSG--AANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFVQYEQD 703 S+K G AN+FI +L + ++ + F FGN++S KV + + SK +GFV Y+ Sbjct: 443 SQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNP 502 Query: 704 ESAQNAINELNGMLLNDKKVYV 769 SAQ AI +NG + K++ V Sbjct: 503 VSAQAAIQAMNGFQIGMKRLKV 524 Score = 48.5 bits (114), Expect = 1e-04 Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 1/87 (1%) Frame = +2 Query: 1127 QGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSN-GVNKGSGFVAFKSSEDATR 1303 +G NL++ +L D + L ++F FG + S KV D ++K GFV++ + A Sbjct: 449 EGANLFIYHLPQEFGDQDIL-QMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQA 507 Query: 1304 ALVAMNGKMVGSKPLYVALAQRKEERR 1384 A+ AMNG +G K L V L + K + + Sbjct: 508 AIQAMNGFQIGMKRLKVQLKRSKNDSK 534 Score = 47.0 bits (110), Expect = 4e-04 Identities = 23/85 (27%), Positives = 48/85 (56%), Gaps = 1/85 (1%) Frame = +2 Query: 815 PKFNNVYVKNLSESTTEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVH 991 P+ N+++ +L + + ++ ++F FG + S + + S+CFGFV+++NP A Sbjct: 448 PEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQA 507 Query: 992 AVEDLNGKKFDDKELYVGRAQKKSE 1066 A++ +NG + K L V + K++ Sbjct: 508 AIQAMNGFQIGMKRLKVQLKRSKND 532
>P98179:RBM3_HUMAN Putative RNA-binding protein 3 - Homo sapiens (Human)| Length = 157 Score = 58.5 bits (140), Expect = 1e-07 Identities = 30/85 (35%), Positives = 52/85 (61%), Gaps = 1/85 (1%) Frame = +2 Query: 812 SPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAV 988 S + ++V L+ +T E L++ F +FGPI+ V+VV+ + +SR FGF+ F NP+ A Sbjct: 2 SSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHAS 61 Query: 989 HAVEDLNGKKFDDKELYVGRAQKKS 1063 A+ +NG+ D +++ V A K + Sbjct: 62 VAMRAMNGESLDGRQIRVDHAGKSA 86 Score = 43.9 bits (102), Expect = 0.003 Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%) Frame = +2 Query: 542 SGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGE-SKGYGFVQYEQDESAQN 718 S +F+ L+ + D +AL D FS+FG I V + + S+G+GF+ + E A Sbjct: 3 SEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASV 62 Query: 719 AINELNGMLLNDKKVYV 769 A+ +NG L+ +++ V Sbjct: 63 AMRAMNGESLDGRQIRV 79 Score = 39.7 bits (91), Expect = 0.056 Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 1/62 (1%) Frame = +2 Query: 1172 DDEKLKELFAEFGTITSCKVMRDSNGV-NKGSGFVAFKSSEDATRALVAMNGKMVGSKPL 1348 D++ L++ F+ FG I+ V++D ++G GF+ F + E A+ A+ AMNG+ + + + Sbjct: 18 DEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAMNGESLDGRQI 77 Query: 1349 YV 1354 V Sbjct: 78 RV 79
>P84586:HNRPG_RAT Heterogeneous nuclear ribonucleoprotein G - Rattus norvegicus (Rat)| Length = 388 Score = 58.5 bits (140), Expect = 1e-07 Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 1/79 (1%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHAVEDL 1006 +++ L+ T E L+ +FG +G I +++++ + KSR F FV FE+P DA D+ Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARDM 69 Query: 1007 NGKKFDDKELYVGRAQKKS 1063 NGK D K + V +A K S Sbjct: 70 NGKSLDGKAIKVEQATKPS 88 Score = 51.2 bits (121), Expect = 2e-05 Identities = 24/72 (33%), Positives = 40/72 (55%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++G L+ + L VF + G +V + + +D T S G+A+V F SPADA + Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARDM 69 Query: 473 NFTPVNGKPIRI 508 N ++GK I++ Sbjct: 70 NGKSLDGKAIKV 81 Score = 39.3 bits (90), Expect = 0.074 Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 1/72 (1%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYEQDESAQNAINEL 733 +FI L+ + KAL F +G I+ + + + +S+G+ FV +E A++ ++ Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARDM 69 Query: 734 NGMLLNDKKVYV 769 NG L+ K + V Sbjct: 70 NGKSLDGKAIKV 81
>Q7TN33:CELF6_MOUSE CUG-BP- and ETR-3-like factor 6 - Mus musculus (Mouse)| Length = 460 Score = 58.5 bits (140), Expect = 1e-07 Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 4/197 (2%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVHAVEDL 1006 ++V + E +LK LF FG I + V++ G + F+ + D A+ A L Sbjct: 48 LFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSAL 107 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 + +K R +Q+K + + R + L++ L G +E + Sbjct: 108 HEQK----------TLPGMNRPIQVKPAASEG------RGEDRKLFVGML-GKQQGEEDV 150 Query: 1187 KELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGK--MVG-SKPLYVA 1357 + LF FG I C V+R +G +KG FV F S +A A+ ++G M G S L V Sbjct: 151 RRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHGSRTMTGASSSLVVK 210 Query: 1358 LAQRKEERRARLQAQFS 1408 LA ER R Q + Sbjct: 211 LADTDRERALRRMQQMA 227 Score = 54.3 bits (129), Expect = 2e-06 Identities = 39/152 (25%), Positives = 68/152 (44%), Gaps = 3/152 (1%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L+VG + + + L +F + G + + V +D T + G A++ + + A +A L Sbjct: 48 LFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSAL 107 Query: 473 N---FTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCK 643 + P +PI++ + S + +F+ L K + + F FG+I C Sbjct: 108 HEQKTLPGMNRPIQVKPA---ASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECT 164 Query: 644 VATEMSGESKGYGFVQYEQDESAQNAINELNG 739 V G SKG FV++ AQ AI L+G Sbjct: 165 VLRSPDGTSKGCAFVKFGSQGEAQAAIQGLHG 196 Score = 50.4 bits (119), Expect = 3e-05 Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 3/84 (3%) Frame = +2 Query: 527 PSSRKSG--AANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMS-GESKGYGFVQYE 697 P ++ G N+FI +L + + L TF FG ++S KV + + +SK +GFV ++ Sbjct: 365 PQQQREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFD 424 Query: 698 QDESAQNAINELNGMLLNDKKVYV 769 SAQ AI +NG + K++ V Sbjct: 425 NPTSAQTAIQAMNGFQIGMKRLKV 448 Score = 49.3 bits (116), Expect = 7e-05 Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 1/87 (1%) Frame = +2 Query: 1127 QGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATR 1303 +G NL++ +L D E L + F FG + S KV D + +K GFV+F + A Sbjct: 373 EGCNLFIYHLPQEFGDAE-LIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQT 431 Query: 1304 ALVAMNGKMVGSKPLYVALAQRKEERR 1384 A+ AMNG +G K L V L + K+ R Sbjct: 432 AIQAMNGFQIGMKRLKVQLKRPKDANR 458 Score = 47.8 bits (112), Expect = 2e-04 Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 2/88 (2%) Frame = +2 Query: 785 KQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITS--VIVVRADDGKSRCFGF 958 +Q+RE P+ N+++ +L + + L + F FG + S V V RA + +S+CFGF Sbjct: 366 QQQREG----PEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATN-QSKCFGF 420 Query: 959 VNFENPDDAVHAVEDLNGKKFDDKELYV 1042 V+F+NP A A++ +NG + K L V Sbjct: 421 VSFDNPTSAQTAIQAMNGFQIGMKRLKV 448 Score = 41.2 bits (95), Expect = 0.019 Identities = 22/82 (26%), Positives = 40/82 (48%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++ L DA+L F G+VVS +V D T S + +V+F +P A A++ + Sbjct: 377 LFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAM 436 Query: 473 NFTPVNGKPIRIMYSNRDPSSR 538 N + K +++ ++R Sbjct: 437 NGFQIGMKRLKVQLKRPKDANR 458
>P90727:U2AF2_CAEBR Splicing factor U2AF 65 kDa subunit - Caenorhabditis briggsae| Length = 488 Score = 58.2 bits (139), Expect = 2e-07 Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 16/189 (8%) Frame = +2 Query: 824 NNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVED 1003 N +++ L TED +KEL +FGP+ + + G S+ + F + +P A+ Sbjct: 282 NKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAG 341 Query: 1004 LNGKKFDDKELYVGRAQKKSERE-------------MQLKESFEKSNKETADRNQGTNLY 1144 LNG + DK+L V A R + L + ++ + N T Sbjct: 342 LNGMQLGDKQLVVQLACANQTRHNTHLPNSASAIAGIDLSQGAGRATEILCLMNMVTEDE 401 Query: 1145 LKNLDGSVDDDEKLKELFAEFGTITSCKVMR---DSNGVNKGSGFVAFKSSEDATRALVA 1315 L++ + + E ++E +++G + S ++ R D G FV F ++ D RA A Sbjct: 402 LRSDEDYEEILEDVREECSKYGIVRSLEIPRPYDDHPVPGVGKVFVEFATTSDCQRAQAA 461 Query: 1316 MNGKMVGSK 1342 + G+ ++ Sbjct: 462 LTGRKFANR 470 Score = 52.8 bits (125), Expect = 6e-06 Identities = 69/300 (23%), Positives = 114/300 (38%), Gaps = 54/300 (18%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVS--------VRVCRDVNTRMSLGYAYVNFSS--P 442 LYVG++ + + D F+Q + + + +C+ + +A++ F S Sbjct: 177 LYVGNIPFGCNEEAMLDFFNQQMHLCNLAQAPGNPILLCQ---INLDKNFAFIEFRSIDE 233 Query: 443 ADAARALEMLNFTPVNGKPIRI--------------MYSNRDPSSRKSGAAN-IFIKNLD 577 A A + +NF G+ +++ M + SS +AN IFI L Sbjct: 234 TTAGMAFDGINFM---GQQLKVRRPRDYQPSQNTFDMNARMPVSSIVVDSANKIFIGGLP 290 Query: 578 KSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDK 757 + + + +FG + + + + G SKGY F +Y AI LNGM L DK Sbjct: 291 NYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDK 350 Query: 758 KVYVGPFVRKQERENVFGSPKFNNVYVKNLSES-------------TTEDNL-------- 874 ++ V Q R N + + +LS+ TED L Sbjct: 351 QLVVQLACANQTRHNTHLPNSASAIAGIDLSQGAGRATEILCLMNMVTEDELRSDEDYEE 410 Query: 875 -----KELFGNFGPITSVIVVRA-DDGKSRCFG--FVNFENPDDAVHAVEDLNGKKFDDK 1030 +E +G + S+ + R DD G FV F D A L G+KF ++ Sbjct: 411 ILEDVREECSKYGIVRSLEIPRPYDDHPVPGVGKVFVEFATTSDCQRAQAALTGRKFANR 470 Score = 47.4 bits (111), Expect = 3e-04 Identities = 47/213 (22%), Positives = 85/213 (39%), Gaps = 8/213 (3%) Frame = +2 Query: 767 VGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFG------NFGPITSVIVVRA 928 VGP V Q R +YV N+ E+ + + F N ++ Sbjct: 166 VGPSVTCQSRR----------LYVGNIPFGCNEEAMLDFFNQQMHLCNLAQAPGNPILLC 215 Query: 929 DDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQ--KKSEREMQLKESFEKS 1102 + F F+ F + D+ + +G F ++L V R + + S+ + S Sbjct: 216 QINLDKNFAFIEFRSIDETTAGMA-FDGINFMGQQLKVRRPRDYQPSQNTFDMNARMPVS 274 Query: 1103 NKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFK 1282 + N+ +++ L + +D+ +KEL FG + + + DS G +KG F + Sbjct: 275 SIVVDSANK---IFIGGLPNYLTEDQ-VKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYL 330 Query: 1283 SSEDATRALVAMNGKMVGSKPLYVALAQRKEER 1381 +A+ +NG +G K L V LA + R Sbjct: 331 DPTLTDQAIAGLNGMQLGDKQLVVQLACANQTR 363
>Q9CW46:RAVR1_MOUSE Ribonucleoprotein PTB-binding 1 - Mus musculus (Mouse)| Length = 748 Score = 58.2 bits (139), Expect = 2e-07 Identities = 68/300 (22%), Positives = 120/300 (40%), Gaps = 1/300 (0%) Frame = +2 Query: 503 RIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYG 682 R+ ++ R +R+ I I+ L + N+ ++D S + + C V + KG Sbjct: 47 RLEHTERQFRNRRK----ILIRGLPGDVTNQEVHDLLSDY-ELKYCFV-----DKYKGTA 96 Query: 683 FVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTT 862 FV E A+ AIN + L ++++ +V P + V NL S T Sbjct: 97 FVTLLNGEQAEAAINTFHQSRLREREL------------SVQLQPTDALLCVANLPPSLT 144 Query: 863 EDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELY 1039 + +EL FG + +V ++ G S+ +GF + D A A DL GK + LY Sbjct: 145 QAQFEELVRPFGSLERCFLVYSERTGHSKGYGFAEYMKKDSAARAKSDLLGKPLGPRTLY 204 Query: 1040 VGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTIT 1219 V + + + T L + +L D + L+ + T T Sbjct: 205 V---------------HWTDAGQLTPALLHSRCLCVDHLPPGFSDVDALRRALSVVYTPT 249 Query: 1220 SCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRARLQA 1399 C++ +G KG + ++++E A A +G+ +G L V+ R+ L A Sbjct: 250 FCQLACGQDGQLKGFAVLEYETAEMAEAAQERADGQALGDSHLRVSFCAPGPPGRSMLAA 309 Score = 46.2 bits (108), Expect = 6e-04 Identities = 49/212 (23%), Positives = 87/212 (41%), Gaps = 2/212 (0%) Frame = +2 Query: 413 GYAYVNFSSPADAARALEMLNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDN 592 G A+V + A A+ + + + + + + D A + + NL S+ Sbjct: 94 GTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQPTD--------ALLCVANLPPSLTQ 145 Query: 593 KALYDTFSAFGNILSC-KVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYV 769 + FG++ C V +E +G SKGYGF +Y + +SA A ++L G L + +YV Sbjct: 146 AQFEELVRPFGSLERCFLVYSERTGHSKGYGFAEYMKKDSAARAKSDLLGKPLGPRTLYV 205 Query: 770 GPFVRKQERENVFGSPKFNNVYVKNLSESTTE-DNLKELFGNFGPITSVIVVRADDGKSR 946 Q + S + V +L ++ D L+ T + DG+ + Sbjct: 206 HWTDAGQLTPALLHS---RCLCVDHLPPGFSDVDALRRALSVVYTPTFCQLACGQDGQLK 262 Query: 947 CFGFVNFENPDDAVHAVEDLNGKKFDDKELYV 1042 F + +E + A A E +G+ D L V Sbjct: 263 GFAVLEYETAEMAEAAQERADGQALGDSHLRV 294 Score = 43.1 bits (100), Expect = 0.005 Identities = 48/212 (22%), Positives = 82/212 (38%), Gaps = 5/212 (2%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L V +L S+ AQ ++ GS+ + T S GY + + AARA L Sbjct: 134 LCVANLPPSLTQAQFEELVRPFGSLERCFLVYSERTGHSKGYGFAEYMKKDSAARAKSDL 193 Query: 473 NFTPVNGKPIRIMYSNRD---PSSRKSGAANIFIKNLDKSI-DNKALYDTFSAFGNILSC 640 P+ + + + +++ P+ S + + +L D AL S C Sbjct: 194 LGKPLGPRTLYVHWTDAGQLTPALLHSRC--LCVDHLPPGFSDVDALRRALSVVYTPTFC 251 Query: 641 KVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPK 820 ++A G+ KG+ ++YE E A+ A +G L D + V ++ + Sbjct: 252 QLACGQDGQLKGFAVLEYETAEMAEAAQERADGQALGDSHLRVSFCAPGPPGRSMLAALI 311 Query: 821 FNNVYVKNLSES-TTEDNLKELFGNFGPITSV 913 N + E NL +L N GP S+ Sbjct: 312 AAQATALNRGKGLLPEPNLLQLLNNLGPSASL 343
>P32831:NGR1_YEAST Negative growth regulatory protein NGR1 - Saccharomyces cerevisiae| (Baker's yeast) Length = 672 Score = 58.2 bits (139), Expect = 2e-07 Identities = 77/318 (24%), Positives = 129/318 (40%), Gaps = 14/318 (4%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVF-SQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEM 469 L+VGDL + +A L +F ++ SV +VRV D T S + +V F + RAL Sbjct: 194 LFVGDLSPTATEADLLSLFQTRFKSVKTVRVMTDPLTGSSRCFGFVRFGDEDERRRALIE 253 Query: 470 LNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAF-----GNIL 634 ++ G+ +R+ Y+ P + N+ ++ ++ + L L Sbjct: 254 MSGKWFQGRALRVAYAT--PRN------NMMLQLQEQQQQQQQLQQQHQQLDQEDNNGPL 305 Query: 635 SCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGS 814 K A + +Q + NA++ M LN+ + V N + + Sbjct: 306 LIKTANNL---------IQNNSNMLPLNALHNAPPMHLNEGGIS-NMRVNDSLPSNTYNT 355 Query: 815 -PKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVH 991 P V+V L TTE L+ LF FGPI + VR +GK+ GFV FE DA Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILN---VRIPNGKN--CGFVKFEKRIDAEA 410 Query: 992 AVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLK------- 1150 +++ L G + + + S SN +T G + Y+ Sbjct: 411 SIQGLQGFIVGGSPIRLSWGRPSS------------SNAKTNSTIMGASQYMSSNGLRAP 458 Query: 1151 NLDGSVDDDEKLKELFAE 1204 + SVD+ +++ E +AE Sbjct: 459 SAASSVDNSKQILEQYAE 476 Score = 57.4 bits (137), Expect = 3e-07 Identities = 66/289 (22%), Positives = 121/289 (41%), Gaps = 17/289 (5%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++GDLD S +A + +++S++ V V++ R A N P + Sbjct: 36 LWMGDLDPSFDEATIEEIWSKLDKKVIVKLIR----------AKKNLLIPCSSTS----- 80 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 S+ + +S ++ N +DN + + N +S + Sbjct: 81 --------------SSNNNTSEENAENQQSASNSTDQLDNSQMINI-----NGISFIDPS 121 Query: 653 EMSGESKGYGFVQYEQDESAQNAINELNGMLLND-----KKVYVGPFVRKQEREN----- 802 GY FV++E + A+ A++ LN L + P ++ R N Sbjct: 122 TTQLHHAGYCFVEFETQKDAKFALS-LNATPLPNFYSPTTNSQTNPTFKRTFRLNWASGA 180 Query: 803 -----VFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADD--GKSRCFGFV 961 + +P+F+ ++V +LS + TE +L LF + V D G SRCFGFV Sbjct: 181 TLQSSIPSTPEFS-LFVGDLSPTATEADLLSLFQTRFKSVKTVRVMTDPLTGSSRCFGFV 239 Query: 962 NFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNK 1108 F + D+ A+ +++GK F + L V A ++ +QL+E ++ + Sbjct: 240 RFGDEDERRRALIEMSGKWFQGRALRVAYATPRNNMMLQLQEQQQQQQQ 288 Score = 41.6 bits (96), Expect = 0.015 Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 3/155 (1%) Frame = +2 Query: 956 FVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKS--EREMQLKESFEKSNKETADRNQ 1129 FV FE DA A+ LN + +Q +R +L + + + + Sbjct: 132 FVEFETQKDAKFALS-LNATPLPNFYSPTTNSQTNPTFKRTFRLNWASGATLQSSIPSTP 190 Query: 1130 GTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDS-NGVNKGSGFVAFKSSEDATRA 1306 +L++ +L + + + L F ++ + +VM D G ++ GFV F ++ RA Sbjct: 191 EFSLFVGDLSPTATEADLLSLFQTRFKSVKTVRVMTDPLTGSSRCFGFVRFGDEDERRRA 250 Query: 1307 LVAMNGKMVGSKPLYVALAQRKEERRARLQAQFSQ 1411 L+ M+GK + L VA A + +LQ Q Q Sbjct: 251 LIEMSGKWFQGRALRVAYATPRNNMMLQLQEQQQQ 285 Score = 38.1 bits (87), Expect = 0.16 Identities = 34/141 (24%), Positives = 59/141 (41%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 ++VG L + QL +F G +++VR+ N +V F DA +++ L Sbjct: 362 VFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNC------GFVKFEKRIDAEASIQGL 415 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 V G PIR+ + S+ K+ N I + + + L SA ++ + K Sbjct: 416 QGFIVGGSPIRLSWGRPSSSNAKT---NSTIMGASQYMSSNGLRAP-SAASSVDNSKQIL 471 Query: 653 EMSGESKGYGFVQYEQDESAQ 715 E E K F+ +Q + Q Sbjct: 472 EQYAEDKRRLFLHQQQQQQQQ 492
>Q96J87:CELF6_HUMAN CUG-BP- and ETR-3-like factor 6 - Homo sapiens (Human)| Length = 481 Score = 58.2 bits (139), Expect = 2e-07 Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 4/197 (2%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVHAVEDL 1006 ++V + E +LK LF FG I + V++ G + F+ + D A+ A L Sbjct: 48 LFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSAL 107 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 1186 + +K R +Q+K + + R + L++ L G +E + Sbjct: 108 HEQK----------TLPGMNRPIQVKPAASEG------RGEDRKLFVGML-GKQQGEEDV 150 Query: 1187 KELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGK--MVG-SKPLYVA 1357 + LF FG I C V+R +G +KG FV F S +A A+ ++G M G S L V Sbjct: 151 RRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIRGLHGSRTMAGASSSLVVK 210 Query: 1358 LAQRKEERRARLQAQFS 1408 LA ER R Q + Sbjct: 211 LADTDRERALRRMQQMA 227 Score = 54.3 bits (129), Expect = 2e-06 Identities = 39/152 (25%), Positives = 68/152 (44%), Gaps = 3/152 (1%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L+VG + + + L +F + G + + V +D T + G A++ + + A +A L Sbjct: 48 LFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSAL 107 Query: 473 N---FTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCK 643 + P +PI++ + S + +F+ L K + + F FG+I C Sbjct: 108 HEQKTLPGMNRPIQVKPA---ASEGRGEDRKLFVGMLGKQQGEEDVRRLFQPFGHIEECT 164 Query: 644 VATEMSGESKGYGFVQYEQDESAQNAINELNG 739 V G SKG FV++ AQ AI L+G Sbjct: 165 VLRSPDGTSKGCAFVKFGSQGEAQAAIRGLHG 196 Score = 50.4 bits (119), Expect = 3e-05 Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 3/84 (3%) Frame = +2 Query: 527 PSSRKSG--AANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMS-GESKGYGFVQYE 697 P ++ G N+FI +L + + L TF FG ++S KV + + +SK +GFV ++ Sbjct: 386 PQQQREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFD 445 Query: 698 QDESAQNAINELNGMLLNDKKVYV 769 SAQ AI +NG + K++ V Sbjct: 446 NPTSAQTAIQAMNGFQIGMKRLKV 469 Score = 49.3 bits (116), Expect = 7e-05 Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 1/87 (1%) Frame = +2 Query: 1127 QGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATR 1303 +G NL++ +L D E L + F FG + S KV D + +K GFV+F + A Sbjct: 394 EGCNLFIYHLPQEFGDAE-LIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQT 452 Query: 1304 ALVAMNGKMVGSKPLYVALAQRKEERR 1384 A+ AMNG +G K L V L + K+ R Sbjct: 453 AIQAMNGFQIGMKRLKVQLKRPKDANR 479 Score = 47.8 bits (112), Expect = 2e-04 Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 2/88 (2%) Frame = +2 Query: 785 KQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPITS--VIVVRADDGKSRCFGF 958 +Q+RE P+ N+++ +L + + L + F FG + S V V RA + +S+CFGF Sbjct: 387 QQQREG----PEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATN-QSKCFGF 441 Query: 959 VNFENPDDAVHAVEDLNGKKFDDKELYV 1042 V+F+NP A A++ +NG + K L V Sbjct: 442 VSFDNPTSAQTAIQAMNGFQIGMKRLKV 469 Score = 41.2 bits (95), Expect = 0.019 Identities = 22/82 (26%), Positives = 40/82 (48%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++ L DA+L F G+VVS +V D T S + +V+F +P A A++ + Sbjct: 398 LFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAM 457 Query: 473 NFTPVNGKPIRIMYSNRDPSSR 538 N + K +++ ++R Sbjct: 458 NGFQIGMKRLKVQLKRPKDANR 479
>Q10355:YDB2_SCHPO Uncharacterized RNA-binding protein C22E12.02 - Schizosaccharomyces| pombe (Fission yeast) Length = 219 Score = 57.8 bits (138), Expect = 2e-07 Identities = 29/75 (38%), Positives = 47/75 (62%) Frame = +2 Query: 1139 LYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAM 1318 L++ NL V+D E L + F+E+ ++ KV+RD G +G GFV+FK S+ +A Sbjct: 32 LFVGNLGNDVND-ESLYQAFSEYPSLVKTKVVRDREGKTRGFGFVSFKDSDQFLKAWREK 90 Query: 1319 NGKMVGSKPLYVALA 1363 NGK +GS+P+ ++ A Sbjct: 91 NGKYIGSRPVKLSRA 105 Score = 51.2 bits (121), Expect = 2e-05 Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 1/126 (0%) Frame = +2 Query: 815 PKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHA 994 P ++V NL +++L + F + + VVR +GK+R FGFV+F++ D + A Sbjct: 27 PNHFRLFVGNLGNDVNDESLYQAFSEYPSLVKTKVVRDREGKTRGFGFVSFKDSDQFLKA 86 Query: 995 VEDLNGKKFDDKELYVG-RAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVD 1171 + NGK Y+G R K S +K + + N++T D +LY + + Sbjct: 87 WREKNGK-------YIGSRPVKLSRATSDVKPN--EVNEKTIDSKIRNSLYSRTIHHGNR 137 Query: 1172 DDEKLK 1189 +K+K Sbjct: 138 VQKKIK 143 Score = 49.3 bits (116), Expect = 7e-05 Identities = 19/69 (27%), Positives = 40/69 (57%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 +F+ NL +++++LY FS + +++ KV + G+++G+GFV ++ + A E N Sbjct: 32 LFVGNLGNDVNDESLYQAFSEYPSLVKTKVVRDREGKTRGFGFVSFKDSDQFLKAWREKN 91 Query: 737 GMLLNDKKV 763 G + + V Sbjct: 92 GKYIGSRPV 100 Score = 43.9 bits (102), Expect = 0.003 Identities = 39/147 (26%), Positives = 66/147 (44%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L+VG+L V D L+ FS+ S+V +V RD + + G+ +V+F +A Sbjct: 32 LFVGNLGNDVNDESLYQAFSEYPSLVKTKVVRDREGK-TRGFGFVSFKDSDQFLKAWREK 90 Query: 473 NFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT 652 N + +P+++ +R S K N K +D I N +LY GN + K+ Sbjct: 91 NGKYIGSRPVKL---SRATSDVKPNEVN--EKTIDSKIRN-SLYSRTIHHGNRVQKKIKN 144 Query: 653 EMSGESKGYGFVQYEQDESAQNAINEL 733 + +G + +AQ+A EL Sbjct: 145 K-------HGKNSSKSSRAAQSAAAEL 164
>P17130:ROA1_XENLA Heterogeneous nuclear ribonucleoproteins A1 homolog - Xenopus| laevis (African clawed frog) Length = 365 Score = 57.8 bits (138), Expect = 2e-07 Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 6/147 (4%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGE-SKGYGFVQYEQDESAQNAI--- 724 +FI L +++L + F +G + C V + + + S+G+GFV Y + A+ Sbjct: 16 LFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAMTAR 75 Query: 725 -NELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGP 901 ++++G ++ K+ V +++ ++V + E T ED+L+E F +G Sbjct: 76 PHKVDGRVVEPKRA-----VSREDSSRPGAHLTVKKIFVGGIKEDTEEDHLREYFEQYGK 130 Query: 902 ITSV-IVVRADDGKSRCFGFVNFENPD 979 I + I+ GK R F FV FE+ D Sbjct: 131 IEVIEIMTDRGSGKKRGFAFVTFEDHD 157 Score = 46.2 bits (108), Expect = 6e-04 Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%) Frame = +2 Query: 1175 DEKLKELFAEFGTITSCKVMRDSNGV-NKGSGFVAFKSSEDATRALVAMNGKMVG 1336 DE L+E F ++GT+T C VMRD N ++G GFV + S+++ A+ A K+ G Sbjct: 27 DESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAMTARPHKVDG 81
>Q99070:GRP2_SORBI Glycine-rich RNA-binding protein 2 - Sorghum bicolor (Sorghum)| (Sorghum vulgare) Length = 168 Score = 57.8 bits (138), Expect = 2e-07 Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 1/77 (1%) Frame = +2 Query: 833 YVKNLSESTTEDNLKELFGNFGP-ITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLN 1009 +V L+ +T + L++ F NFG I S ++ + G+SR FGFV F + + A+E++N Sbjct: 11 FVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMN 70 Query: 1010 GKKFDDKELYVGRAQKK 1060 GK+ D + + V +AQ + Sbjct: 71 GKELDGRNITVNQAQSR 87 Score = 48.5 bits (114), Expect = 1e-04 Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 1/71 (1%) Frame = +2 Query: 560 FIKNLDKSIDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYEQDESAQNAINELN 736 F+ L + +N+ L F+ FG ++ KV T+ +G S+G+GFV + ++S +AI +N Sbjct: 11 FVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMN 70 Query: 737 GMLLNDKKVYV 769 G L+ + + V Sbjct: 71 GKELDGRNITV 81 Score = 44.3 bits (103), Expect = 0.002 Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Frame = +2 Query: 1172 DDEKLKELFAEFGTITSCKVMRD-SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPL 1348 ++E L++ FA FG + KV+ D G ++G GFV F S + A+ MNGK + + + Sbjct: 20 NNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMNGKELDGRNI 79 Query: 1349 YVALAQRK 1372 V AQ + Sbjct: 80 TVNQAQSR 87
>P36629:U2AF2_SCHPO Splicing factor U2AF 59 kDa subunit - Schizosaccharomyces pombe| (Fission yeast) Length = 517 Score = 57.4 bits (137), Expect = 3e-07 Identities = 52/196 (26%), Positives = 86/196 (43%), Gaps = 18/196 (9%) Frame = +2 Query: 824 NNVYVKNLSESTTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHAVE 1000 + +Y+ NL + ED + EL FG + S +++ DG S+ F F F+NP DA A+ Sbjct: 310 DKIYISNLPLNLGEDQVVELLKPFGDLLSFQLIKNIADGSSKGFCFCEFKNPSDAEVAIS 369 Query: 1001 DLNGKKFDDKELY-----VGRAQ---KKSEREMQLKESFEKSNKETADR-----NQGTNL 1141 L+GK +L+ VG Q KS L E + S++ R N T Sbjct: 370 GLDGKDTYGNKLHAQFACVGLNQAMIDKSNGMAILTELAKASSQSIPTRVLQLHNLITGD 429 Query: 1142 YLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD----SNGVNKGSGFVAFKSSEDATRAL 1309 + ++ D E +K F+ +G + K+ R ++G+ G FV + A A+ Sbjct: 430 EIMDVQEYEDIYESVKTQFSNYGPLIDIKIPRSIGTRNSGLGTGKVFVRYSDIRSAEVAM 489 Query: 1310 VAMNGKMVGSKPLYVA 1357 M G + + +A Sbjct: 490 EEMKGCKFNDRTIVIA 505 Score = 50.1 bits (118), Expect = 4e-05 Identities = 40/193 (20%), Positives = 85/193 (44%), Gaps = 34/193 (17%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 +Y+ +L +++ + Q+ ++ G ++S ++ +++ S G+ + F +P+DA A+ L Sbjct: 312 IYISNLPLNLGEDQVVELLKPFGDLLSFQLIKNIADGSSKGFCFCEFKNPSDAEVAISGL 371 Query: 473 NFTPVNGKPIRIMYS----NRDPSSRKSGAANI--FIKNLDKSIDNKAL----------- 601 + G + ++ N+ + +G A + K +SI + L Sbjct: 372 DGKDTYGNKLHAQFACVGLNQAMIDKSNGMAILTELAKASSQSIPTRVLQLHNLITGDEI 431 Query: 602 ---------YDT----FSAFGNILSCKV----ATEMSGESKGYGFVQYEQDESAQNAINE 730 Y++ FS +G ++ K+ T SG G FV+Y SA+ A+ E Sbjct: 432 MDVQEYEDIYESVKTQFSNYGPLIDIKIPRSIGTRNSGLGTGKVFVRYSDIRSAEVAMEE 491 Query: 731 LNGMLLNDKKVYV 769 + G ND+ + + Sbjct: 492 MKGCKFNDRTIVI 504 Score = 38.1 bits (87), Expect = 0.16 Identities = 26/99 (26%), Positives = 51/99 (51%), Gaps = 1/99 (1%) Frame = +2 Query: 1070 EMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD-SN 1246 E+ K S + + + D +Y+ NL ++ +D+ + EL FG + S +++++ ++ Sbjct: 291 EVSQKRSDDYAKNDVLDSKD--KIYISNLPLNLGEDQVV-ELLKPFGDLLSFQLIKNIAD 347 Query: 1247 GVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALA 1363 G +KG F FK+ DA A+ ++GK L+ A Sbjct: 348 GSSKGFCFCEFKNPSDAEVAISGLDGKDTYGNKLHAQFA 386
>Q96T58:MINT_HUMAN Msx2-interacting protein - Homo sapiens (Human)| Length = 3664 Score = 57.4 bits (137), Expect = 3e-07 Identities = 69/292 (23%), Positives = 116/292 (39%), Gaps = 16/292 (5%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L V D S++D LF F + G V SV++ R Y V F D +AL Sbjct: 342 LPVRSTDTSLKDG-LFHEFKKFGKVTSVQIHGTSEER----YGLVFFRQQEDQEKALTAS 396 Query: 473 NFTPVNGKPIRIM---------------YSNRDPSSRKSGAANIFIKNLDKSIDNKALYD 607 G I + R +FI NL+K+ L + Sbjct: 397 KGKLFFGMQIEVTAWIGPETESENEFRPLDERIDEFHPKATRTLFIGNLEKTTTYHDLRN 456 Query: 608 TFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRK 787 F FG I+ + +++G + Y F+QY S AI +++G L + ++ +G Sbjct: 457 IFQRFGEIVDIDIK-KVNGVPQ-YAFLQYCDIASVCKAIKKMDGEYLGNNRLKLG----- 509 Query: 788 QERENVFG-SPKFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVN 964 FG S N V++ LS + ++ L F +GP+ V+ R + V Sbjct: 510 ------FGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRL-----KGMALVL 558 Query: 965 FENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETAD 1120 + + A AV++ G+K ++ V A ++S ++ EKS ++ D Sbjct: 559 YNEIEYAQAAVKETKGRKIGGNKIKVDFANRES--QLAFYHCMEKSGQDIRD 608 Score = 54.7 bits (130), Expect = 2e-06 Identities = 67/316 (21%), Positives = 124/316 (39%), Gaps = 38/316 (12%) Frame = +2 Query: 554 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINEL 733 N+ +++ D S+ + L+ F FG + S ++ + YG V + Q E + A+ Sbjct: 341 NLPVRSTDTSLKD-GLFHEFKKFGKVTSVQIH---GTSEERYGLVFFRQQEDQEKALTAS 396 Query: 734 NGMLLNDKKV----YVGPFVRKQ-------ERENVFGSPKFNNVYVKNLSESTTEDNLKE 880 G L ++ ++GP + ER + F +++ NL ++TT +L+ Sbjct: 397 KGKLFFGMQIEVTAWIGPETESENEFRPLDERIDEFHPKATRTLFIGNLEKTTTYHDLRN 456 Query: 881 LFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKK 1060 +F FG I + + + + + F+ + + A++ ++G+ Y+G + Sbjct: 457 IFQRFGEIVDIDIKKVNGVPQ--YAFLQYCDIASVCKAIKKMDGE-------YLGNNR-- 505 Query: 1061 SEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRD 1240 LK F KS ++L L +V D + L F +G + KV+ D Sbjct: 506 ------LKLGFGKSMPTNC-------VWLDGLSSNVSD-QYLTRHFCRYGPVV--KVVFD 549 Query: 1241 SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPL------------------------ 1348 KG V + E A A+ G+ +G + Sbjct: 550 RL---KGMALVLYNEIEYAQAAVKETKGRKIGGNKIKVDFANRESQLAFYHCMEKSGQDI 606 Query: 1349 ---YVALAQRKEERRA 1387 Y LA+R+EERRA Sbjct: 607 RDFYEMLAERREERRA 622
>O35479:HNRPG_MOUSE Heterogeneous nuclear ribonucleoprotein G - Mus musculus (Mouse)| Length = 388 Score = 57.4 bits (137), Expect = 3e-07 Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 1/77 (1%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHAVEDL 1006 +++ L+ T E L+ +FG +G I +I+++ + KSR F FV E+P DA A D+ Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLESPADAKDAARDM 69 Query: 1007 NGKKFDDKELYVGRAQK 1057 NGK D K + V +A K Sbjct: 70 NGKSLDGKAIKVEQATK 86 Score = 50.1 bits (118), Expect = 4e-05 Identities = 24/72 (33%), Positives = 40/72 (55%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++G L+ + L VF + G +V + + +D T S G+A+V SPADA A + Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLESPADAKDAARDM 69 Query: 473 NFTPVNGKPIRI 508 N ++GK I++ Sbjct: 70 NGKSLDGKAIKV 81 Score = 38.9 bits (89), Expect = 0.096 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 1/72 (1%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYEQDESAQNAINEL 733 +FI L+ + KAL F +G I+ + + + +S+G+ FV E A++A ++ Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLESPADAKDAARDM 69 Query: 734 NGMLLNDKKVYV 769 NG L+ K + V Sbjct: 70 NGKSLDGKAIKV 81
>O75526:HNRGT_HUMAN Testis-specific heterogeneous nuclear ribonucleoprotein G-T - Homo| sapiens (Human) Length = 392 Score = 57.4 bits (137), Expect = 3e-07 Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 2/113 (1%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHAVEDL 1006 +++ L+ T E L+ FG +G I V++++ + KSR F FV FE+P DA A D+ Sbjct: 10 LFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARDM 69 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNK-ETADRNQGTNLYLKNLDG 1162 NGK D K + V +A K +FE S + R++G +L+ G Sbjct: 70 NGKSLDGKAIKVAQA---------TKPAFESSRRGPPPPRSRGRPRFLRGTRG 113 Score = 52.0 bits (123), Expect = 1e-05 Identities = 25/77 (32%), Positives = 43/77 (55%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++G L++ + L F + G +V V + +D T S G+A+V F SPADA A + Sbjct: 10 LFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARDM 69 Query: 473 NFTPVNGKPIRIMYSNR 523 N ++GK I++ + + Sbjct: 70 NGKSLDGKAIKVAQATK 86 Score = 41.2 bits (95), Expect = 0.019 Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 1/88 (1%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYEQDESAQNAINEL 733 +FI L+ D KAL F +G I+ + + + +S+G+ FV +E A+ A ++ Sbjct: 10 LFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARDM 69 Query: 734 NGMLLNDKKVYVGPFVRKQERENVFGSP 817 NG L+ K + V + + G P Sbjct: 70 NGKSLDGKAIKVAQATKPAFESSRRGPP 97
>Q792H5:CELF2_RAT CUG-BP- and ETR-3-like factor 2 - Rattus norvegicus (Rat)| Length = 508 Score = 57.4 bits (137), Expect = 3e-07 Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 8/156 (5%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRD--VNTRMSLGYAYVNF---SSPADAAR 457 ++VG + S + +L ++F G+V + V RD N S G +V F + +A Sbjct: 42 MFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQN 101 Query: 458 ALEMLNFTPVNGKPIRIMYSNRDPSSRKSGAAN---IFIKNLDKSIDNKALYDTFSAFGN 628 AL + P PI++ + S KS A +FI + K + + FS FG Sbjct: 102 ALHNIKTLPGMHHPIQM----KPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157 Query: 629 ILSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 I C++ G S+G FV + AQNAI ++ Sbjct: 158 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMH 193 Score = 51.6 bits (122), Expect = 1e-05 Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%) Frame = +2 Query: 533 SRKSG--AANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFVQYEQD 703 S+K G AN+FI +L + ++ + F FGN++S KV + + SK +GFV Y+ Sbjct: 415 SQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNP 474 Query: 704 ESAQNAINELNGMLLNDKKVYV 769 SAQ AI +NG + K++ V Sbjct: 475 VSAQAAIQAMNGFQIGMKRLKV 496 Score = 49.7 bits (117), Expect = 5e-05 Identities = 71/379 (18%), Positives = 141/379 (37%), Gaps = 15/379 (3%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++G + + + +FS G + R+ R + +S G A+V FS+ A A A++ + Sbjct: 134 LFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAFVTFSTRAMAQNAIKAM 192 Query: 473 NFTPVN---GKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCK 643 + + PI + +++ + + + + N A + + G + Sbjct: 193 HQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQL--NTATWGNLTGLGGLTPQY 250 Query: 644 VAT-EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPK 820 +A + + S G Q + NA+ N L + + Sbjct: 251 LALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSS 310 Query: 821 FNNVYVKNLSESTTED----------NLKELFGNFGPITSVIVVRADDGKSRCFGFVNFE 970 ++ ST +L L G G + + A G + G + Sbjct: 311 ALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAGMAALNGGLGAT 370 Query: 971 NPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLK 1150 + D + + + Y A + L++ +++ +G NL++ Sbjct: 371 GLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGP--EGANLFIY 428 Query: 1151 NLDGSVDDDEKLKELFAEFGTITSCKVMRDSN-GVNKGSGFVAFKSSEDATRALVAMNGK 1327 +L D + L ++F FG + S KV D ++K GFV++ + A A+ AMNG Sbjct: 429 HLPQEFGDQDIL-QMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGF 487 Query: 1328 MVGSKPLYVALAQRKEERR 1384 +G K L V L + K + + Sbjct: 488 QIGMKRLKVQLKRSKNDSK 506
>Q5R8Y8:CELF2_PONPY CUG-BP- and ETR-3-like factor 2 - Pongo pygmaeus (Orangutan)| Length = 508 Score = 57.4 bits (137), Expect = 3e-07 Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 8/156 (5%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRD--VNTRMSLGYAYVNF---SSPADAAR 457 ++VG + S + +L ++F G+V + V RD N S G +V F + +A Sbjct: 42 MFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQN 101 Query: 458 ALEMLNFTPVNGKPIRIMYSNRDPSSRKSGAAN---IFIKNLDKSIDNKALYDTFSAFGN 628 AL + P PI++ + S KS A +FI + K + + FS FG Sbjct: 102 ALHNIKTLPGMHHPIQM----KPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157 Query: 629 ILSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 I C++ G S+G FV + AQNAI ++ Sbjct: 158 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMH 193 Score = 51.6 bits (122), Expect = 1e-05 Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%) Frame = +2 Query: 533 SRKSG--AANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFVQYEQD 703 S+K G AN+FI +L + ++ + F FGN++S KV + + SK +GFV Y+ Sbjct: 415 SQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNP 474 Query: 704 ESAQNAINELNGMLLNDKKVYV 769 SAQ AI +NG + K++ V Sbjct: 475 VSAQAAIQAMNGFQIGMKRLKV 496 Score = 48.9 bits (115), Expect = 9e-05 Identities = 71/379 (18%), Positives = 141/379 (37%), Gaps = 15/379 (3%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++G + + + +FS G + R+ R + +S G A+V FS+ A A A++ + Sbjct: 134 LFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAFVTFSTRAMAQNAIKAM 192 Query: 473 NFTPVN---GKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCK 643 + + PI + +++ + + + + N A + + G + Sbjct: 193 HQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQL--NTATWGNLTGLGGLTPQY 250 Query: 644 VAT-EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPK 820 +A + + S G Q + NA+ N L + + Sbjct: 251 LALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSTTSS 310 Query: 821 FNNVYVKNLSESTTED----------NLKELFGNFGPITSVIVVRADDGKSRCFGFVNFE 970 ++ ST +L L G G + + A G + G + Sbjct: 311 ALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAGMAALNGGLGAT 370 Query: 971 NPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLK 1150 + D + + + Y A + L++ +++ +G NL++ Sbjct: 371 GLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGP--EGANLFIY 428 Query: 1151 NLDGSVDDDEKLKELFAEFGTITSCKVMRDSN-GVNKGSGFVAFKSSEDATRALVAMNGK 1327 +L D + L ++F FG + S KV D ++K GFV++ + A A+ AMNG Sbjct: 429 HLPQEFGDQDIL-QMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGF 487 Query: 1328 MVGSKPLYVALAQRKEERR 1384 +G K L V L + K + + Sbjct: 488 QIGMKRLKVQLKRSKNDSK 506
>Q9Z0H4:CELF2_MOUSE CUG-BP- and ETR-3-like factor 2 - Mus musculus (Mouse)| Length = 508 Score = 57.4 bits (137), Expect = 3e-07 Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 8/156 (5%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRD--VNTRMSLGYAYVNF---SSPADAAR 457 ++VG + S + +L ++F G+V + V RD N S G +V F + +A Sbjct: 42 MFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQN 101 Query: 458 ALEMLNFTPVNGKPIRIMYSNRDPSSRKSGAAN---IFIKNLDKSIDNKALYDTFSAFGN 628 AL + P PI++ + S KS A +FI + K + + FS FG Sbjct: 102 ALHNIKTLPGMHHPIQM----KPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157 Query: 629 ILSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 I C++ G S+G FV + AQNAI ++ Sbjct: 158 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMH 193 Score = 51.6 bits (122), Expect = 1e-05 Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%) Frame = +2 Query: 533 SRKSG--AANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFVQYEQD 703 S+K G AN+FI +L + ++ + F FGN++S KV + + SK +GFV Y+ Sbjct: 415 SQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNP 474 Query: 704 ESAQNAINELNGMLLNDKKVYV 769 SAQ AI +NG + K++ V Sbjct: 475 VSAQAAIQAMNGFQIGMKRLKV 496 Score = 49.7 bits (117), Expect = 5e-05 Identities = 71/379 (18%), Positives = 141/379 (37%), Gaps = 15/379 (3%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++G + + + +FS G + R+ R + +S G A+V FS+ A A A++ + Sbjct: 134 LFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAFVTFSTRAMAQNAIKAM 192 Query: 473 NFTPVN---GKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCK 643 + + PI + +++ + + + + N A + + G + Sbjct: 193 HQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQL--NTATWGNLTGLGGLTPQY 250 Query: 644 VAT-EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPK 820 +A + + S G Q + NA+ N L + + Sbjct: 251 LALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSSTSS 310 Query: 821 FNNVYVKNLSESTTED----------NLKELFGNFGPITSVIVVRADDGKSRCFGFVNFE 970 ++ ST +L L G G + + A G + G + Sbjct: 311 ALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAGMAALNGGLGAT 370 Query: 971 NPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLK 1150 + D + + + Y A + L++ +++ +G NL++ Sbjct: 371 GLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGP--EGANLFIY 428 Query: 1151 NLDGSVDDDEKLKELFAEFGTITSCKVMRDSN-GVNKGSGFVAFKSSEDATRALVAMNGK 1327 +L D + L ++F FG + S KV D ++K GFV++ + A A+ AMNG Sbjct: 429 HLPQEFGDQDIL-QMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGF 487 Query: 1328 MVGSKPLYVALAQRKEERR 1384 +G K L V L + K + + Sbjct: 488 QIGMKRLKVQLKRSKNDSK 506
>O95319:CELF2_HUMAN CUG-BP- and ETR-3-like factor 2 - Homo sapiens (Human)| Length = 508 Score = 57.4 bits (137), Expect = 3e-07 Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 8/156 (5%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRD--VNTRMSLGYAYVNF---SSPADAAR 457 ++VG + S + +L ++F G+V + V RD N S G +V F + +A Sbjct: 42 MFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQN 101 Query: 458 ALEMLNFTPVNGKPIRIMYSNRDPSSRKSGAAN---IFIKNLDKSIDNKALYDTFSAFGN 628 AL + P PI++ + S KS A +FI + K + + FS FG Sbjct: 102 ALHNIKTLPGMHHPIQM----KPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQ 157 Query: 629 ILSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 I C++ G S+G FV + AQNAI ++ Sbjct: 158 IEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMH 193 Score = 51.6 bits (122), Expect = 1e-05 Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%) Frame = +2 Query: 533 SRKSG--AANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFVQYEQD 703 S+K G AN+FI +L + ++ + F FGN++S KV + + SK +GFV Y+ Sbjct: 415 SQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNP 474 Query: 704 ESAQNAINELNGMLLNDKKVYV 769 SAQ AI +NG + K++ V Sbjct: 475 VSAQAAIQAMNGFQIGMKRLKV 496 Score = 48.9 bits (115), Expect = 9e-05 Identities = 71/379 (18%), Positives = 141/379 (37%), Gaps = 15/379 (3%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++G + + + +FS G + R+ R + +S G A+V FS+ A A A++ + Sbjct: 134 LFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDG-LSRGCAFVTFSTRAMAQNAIKAM 192 Query: 473 NFTPVN---GKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCK 643 + + PI + +++ + + + + N A + + G + Sbjct: 193 HQSQTMEGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQL--NTATWGNLTGLGGLTPQY 250 Query: 644 VAT-EMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPK 820 +A + + S G Q + NA+ N L + + Sbjct: 251 LALLQQATSSSNLGAFSGIQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSTTSS 310 Query: 821 FNNVYVKNLSESTTED----------NLKELFGNFGPITSVIVVRADDGKSRCFGFVNFE 970 ++ ST +L L G G + + A G + G + Sbjct: 311 ALGALTSPVAASTPNSTAGAAMNSLTSLGTLQGLAGATVGLNNINALAGMAALNGGLGAT 370 Query: 971 NPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLK 1150 + D + + + Y A + L++ +++ +G NL++ Sbjct: 371 GLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGP--EGANLFIY 428 Query: 1151 NLDGSVDDDEKLKELFAEFGTITSCKVMRDSN-GVNKGSGFVAFKSSEDATRALVAMNGK 1327 +L D + L ++F FG + S KV D ++K GFV++ + A A+ AMNG Sbjct: 429 HLPQEFGDQDIL-QMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGF 487 Query: 1328 MVGSKPLYVALAQRKEERR 1384 +G K L V L + K + + Sbjct: 488 QIGMKRLKVQLKRSKNDSK 506
>P53883:NOP13_YEAST Nucleolar protein 13 - Saccharomyces cerevisiae (Baker's yeast)| Length = 403 Score = 57.0 bits (136), Expect = 3e-07 Identities = 56/232 (24%), Positives = 108/232 (46%), Gaps = 9/232 (3%) Frame = +2 Query: 665 ESKGYGFVQYEQDESAQNAI----NELNG--MLLNDKKVYVGPFVRKQERENVFGSPKFN 826 ++KG+ ++ ++ E + + + LNG ML+ D + Y G K + + +P Sbjct: 181 KNKGFCYMFFKNVEQMKAVLELSESHLNGRNMLIKDSENYSGR-PDKDDLVAMSKNPPSR 239 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADD-GKSRCFGFVNFENPDDAVHAVED 1003 ++V NLS T+D L++ F + G I + + +D GK + F F++F+N + + + ++D Sbjct: 240 ILFVGNLSFDVTDDLLRKHFQHCGDIVKIRMATFEDSGKCKGFAFIDFKNEEGSTNELKD 299 Query: 1004 LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDG--SVDDD 1177 + +K + L + + +S+R+++ K E RN ++ + N G D Sbjct: 300 KSCRKIAGRPLRMEYGEDRSKRQVRKK-------VENVSRNNSSSFDISNNKGYDRAGQD 352 Query: 1178 EKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMV 1333 K + V DSN K S VA +++ + A+V GK V Sbjct: 353 NGSKPEYKRSNANRRPPV--DSNNRTKSS--VALATAQRGSAAIVPSQGKKV 400 Score = 45.8 bits (107), Expect = 8e-04 Identities = 54/232 (23%), Positives = 98/232 (42%), Gaps = 25/232 (10%) Frame = +2 Query: 782 RKQERENVFGSPKFNNVYVKNLSESTTEDNLKELF--------GNFGPITSVIVVR---- 925 +K++ EN +G V++ NLS TT+D+L F +T + R Sbjct: 117 KKKKDENKYG------VWIGNLSFDTTKDDLVRFFIAKTKDNEDEKSRVTEQDITRLSMP 170 Query: 926 ------ADDGKSRCFGFVNFENPDDAVHAVE----DLNGKKF--DDKELYVGRAQKKSER 1069 ++ K++ F ++ F+N + +E LNG+ D E Y GR K Sbjct: 171 RVAAKNSNAMKNKGFCYMFFKNVEQMKAVLELSESHLNGRNMLIKDSENYSGRPDK---- 226 Query: 1070 EMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMR-DSN 1246 + +K R L++ NL V DD L++ F G I ++ + + Sbjct: 227 -----DDLVAMSKNPPSRI----LFVGNLSFDVTDD-LLRKHFQHCGDIVKIRMATFEDS 276 Query: 1247 GVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRARLQAQ 1402 G KG F+ FK+ E +T L + + + +PL + + + +R+ R + + Sbjct: 277 GKCKGFAFIDFKNEEGSTNELKDKSCRKIAGRPLRMEYGEDRSKRQVRKKVE 328 Score = 40.0 bits (92), Expect = 0.043 Identities = 22/83 (26%), Positives = 42/83 (50%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L+VG+L V D L F G +V +R+ ++ G+A+++F + + L+ Sbjct: 241 LFVGNLSFDVTDDLLRKHFQHCGDIVKIRMATFEDSGKCKGFAFIDFKNEEGSTNELKDK 300 Query: 473 NFTPVNGKPIRIMYSNRDPSSRK 541 + + G+P+R+ Y D S R+ Sbjct: 301 SCRKIAGRPLRMEY-GEDRSKRQ 322
>P04256:ROA1_RAT Heterogeneous nuclear ribonucleoprotein A1 - Rattus norvegicus| (Rat) Length = 320 Score = 56.6 bits (135), Expect = 4e-07 Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 7/151 (4%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++G L D L F Q G++ V RD NT+ S G+ +V +++ + A + Sbjct: 16 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA---M 72 Query: 473 NFTP--VNGKPIRIMYSNRDPSSRKSGA----ANIFIKNLDKSIDNKALYDTFSAFGNIL 634 N P V+G+ + + S++ GA IF+ + + + L D F +G I Sbjct: 73 NARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIE 132 Query: 635 SCKVATEM-SGESKGYGFVQYEQDESAQNAI 724 ++ T+ SG+ +G+ FV ++ +S + Sbjct: 133 VIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 163 Score = 54.7 bits (130), Expect = 2e-06 Identities = 37/147 (25%), Positives = 70/147 (47%), Gaps = 6/147 (4%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGE-SKGYGFVQYEQDESAQNAIN-- 727 +FI L +++L F +G + C V + + + S+G+GFV Y E A+N Sbjct: 16 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNAR 75 Query: 728 --ELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGP 901 +++G ++ K+ V +++ + ++V + E T E +L++ F +G Sbjct: 76 PHKVDGRVVEPKRA-----VSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGK 130 Query: 902 ITSV-IVVRADDGKSRCFGFVNFENPD 979 I + I+ GK R F FV F++ D Sbjct: 131 IEVIEIMTDRGSGKKRGFAFVTFDDHD 157 Score = 41.6 bits (96), Expect = 0.015 Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%) Frame = +2 Query: 1175 DEKLKELFAEFGTITSCKVMRDSNGV-NKGSGFVAFKSSEDATRALVAMNGKMVG 1336 DE L+ F ++GT+T C VMRD N ++G GFV + + E+ A+ A K+ G Sbjct: 27 DESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
>P49312:ROA1_MOUSE Heterogeneous nuclear ribonucleoprotein A1 - Mus musculus (Mouse)| Length = 320 Score = 56.6 bits (135), Expect = 4e-07 Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 7/151 (4%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++G L D L F Q G++ V RD NT+ S G+ +V +++ + A + Sbjct: 16 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA---M 72 Query: 473 NFTP--VNGKPIRIMYSNRDPSSRKSGA----ANIFIKNLDKSIDNKALYDTFSAFGNIL 634 N P V+G+ + + S++ GA IF+ + + + L D F +G I Sbjct: 73 NARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIE 132 Query: 635 SCKVATEM-SGESKGYGFVQYEQDESAQNAI 724 ++ T+ SG+ +G+ FV ++ +S + Sbjct: 133 VIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 163 Score = 54.7 bits (130), Expect = 2e-06 Identities = 37/147 (25%), Positives = 70/147 (47%), Gaps = 6/147 (4%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGE-SKGYGFVQYEQDESAQNAIN-- 727 +FI L +++L F +G + C V + + + S+G+GFV Y E A+N Sbjct: 16 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNAR 75 Query: 728 --ELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGP 901 +++G ++ K+ V +++ + ++V + E T E +L++ F +G Sbjct: 76 PHKVDGRVVEPKRA-----VSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGK 130 Query: 902 ITSV-IVVRADDGKSRCFGFVNFENPD 979 I + I+ GK R F FV F++ D Sbjct: 131 IEVIEIMTDRGSGKKRGFAFVTFDDHD 157 Score = 41.6 bits (96), Expect = 0.015 Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%) Frame = +2 Query: 1175 DEKLKELFAEFGTITSCKVMRDSNGV-NKGSGFVAFKSSEDATRALVAMNGKMVG 1336 DE L+ F ++GT+T C VMRD N ++G GFV + + E+ A+ A K+ G Sbjct: 27 DESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
>P09651:ROA1_HUMAN Heterogeneous nuclear ribonucleoprotein A1 - Homo sapiens (Human)| Length = 372 Score = 56.6 bits (135), Expect = 4e-07 Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 7/151 (4%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++G L D L F Q G++ V RD NT+ S G+ +V +++ + A + Sbjct: 16 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA---M 72 Query: 473 NFTP--VNGKPIRIMYSNRDPSSRKSGA----ANIFIKNLDKSIDNKALYDTFSAFGNIL 634 N P V+G+ + + S++ GA IF+ + + + L D F +G I Sbjct: 73 NARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIE 132 Query: 635 SCKVATEM-SGESKGYGFVQYEQDESAQNAI 724 ++ T+ SG+ +G+ FV ++ +S + Sbjct: 133 VIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 163 Score = 54.7 bits (130), Expect = 2e-06 Identities = 37/147 (25%), Positives = 70/147 (47%), Gaps = 6/147 (4%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGE-SKGYGFVQYEQDESAQNAIN-- 727 +FI L +++L F +G + C V + + + S+G+GFV Y E A+N Sbjct: 16 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNAR 75 Query: 728 --ELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGP 901 +++G ++ K+ V +++ + ++V + E T E +L++ F +G Sbjct: 76 PHKVDGRVVEPKRA-----VSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGK 130 Query: 902 ITSV-IVVRADDGKSRCFGFVNFENPD 979 I + I+ GK R F FV F++ D Sbjct: 131 IEVIEIMTDRGSGKKRGFAFVTFDDHD 157 Score = 41.6 bits (96), Expect = 0.015 Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%) Frame = +2 Query: 1175 DEKLKELFAEFGTITSCKVMRDSNGV-NKGSGFVAFKSSEDATRALVAMNGKMVG 1336 DE L+ F ++GT+T C VMRD N ++G GFV + + E+ A+ A K+ G Sbjct: 27 DESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81
>P09867:ROA1_BOVIN Heterogeneous nuclear ribonucleoprotein A1 - Bos taurus (Bovine)| Length = 195 Score = 56.6 bits (135), Expect = 4e-07 Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 7/151 (4%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++G L D L F Q G++ V RD NT+ S G+ +V +++ + A + Sbjct: 15 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAA---M 71 Query: 473 NFTP--VNGKPIRIMYSNRDPSSRKSGA----ANIFIKNLDKSIDNKALYDTFSAFGNIL 634 N P V+G+ + + S++ GA IF+ + + + L D F +G I Sbjct: 72 NARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIE 131 Query: 635 SCKVATEM-SGESKGYGFVQYEQDESAQNAI 724 ++ T+ SG+ +G+ FV ++ +S + Sbjct: 132 VIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 162 Score = 54.7 bits (130), Expect = 2e-06 Identities = 37/147 (25%), Positives = 70/147 (47%), Gaps = 6/147 (4%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGE-SKGYGFVQYEQDESAQNAIN-- 727 +FI L +++L F +G + C V + + + S+G+GFV Y E A+N Sbjct: 15 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNAR 74 Query: 728 --ELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGP 901 +++G ++ K+ V +++ + ++V + E T E +L++ F +G Sbjct: 75 PHKVDGRVVEPKRA-----VSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGK 129 Query: 902 ITSV-IVVRADDGKSRCFGFVNFENPD 979 I + I+ GK R F FV F++ D Sbjct: 130 IEVIEIMTDRGSGKKRGFAFVTFDDHD 156 Score = 41.6 bits (96), Expect = 0.015 Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%) Frame = +2 Query: 1175 DEKLKELFAEFGTITSCKVMRDSNGV-NKGSGFVAFKSSEDATRALVAMNGKMVG 1336 DE L+ F ++GT+T C VMRD N ++G GFV + + E+ A+ A K+ G Sbjct: 26 DESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 80
>Q8IY67:RAVR1_HUMAN Ribonucleoprotein PTB-binding 1 - Homo sapiens (Human)| Length = 606 Score = 56.6 bits (135), Expect = 4e-07 Identities = 70/300 (23%), Positives = 119/300 (39%), Gaps = 1/300 (0%) Frame = +2 Query: 503 RIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYG 682 R+ ++ R +R+ I I+ L + N+ ++D S + + C V + KG Sbjct: 47 RLEHTERQFRNRRK----ILIRGLPGDVTNQEVHDLLSDY-ELKYCFV-----DKYKGTA 96 Query: 683 FVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTT 862 FV E A+ AIN + L ++++ +V P + V NL S T Sbjct: 97 FVTLLNGEQAEAAINAFHQSRLREREL------------SVQLQPTDALLCVANLPPSLT 144 Query: 863 EDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELY 1039 + +EL FG + +V ++ G+S+ +GF + D A A DL GK + LY Sbjct: 145 QQQFEELVRPFGSLERCFLVYSERTGQSKGYGFAEYMKKDSAARAKSDLLGKPLGPRTLY 204 Query: 1040 VGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTIT 1219 V QL + S DR L +D + L + + T Sbjct: 205 VHWTDAG-----QLTPALLHSRCLCVDR----------LPPGFNDVDALCRALSAVHSPT 249 Query: 1220 SCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRARLQA 1399 C++ +G KG + ++++E A A +G +G L V+ R+ L A Sbjct: 250 FCQLACGQDGQLKGFAVLEYETAEMAEEAQQQADGLSLGGSHLRVSFCAPGPPGRSMLAA 309 Score = 46.6 bits (109), Expect = 5e-04 Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 1/120 (0%) Frame = +2 Query: 413 GYAYVNFSSPADAARALEMLNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDN 592 G A+V + A A+ + + + + + + D A + + NL S+ Sbjct: 94 GTAFVTLLNGEQAEAAINAFHQSRLRERELSVQLQPTD--------ALLCVANLPPSLTQ 145 Query: 593 KALYDTFSAFGNILSC-KVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYV 769 + + FG++ C V +E +G+SKGYGF +Y + +SA A ++L G L + +YV Sbjct: 146 QQFEELVRPFGSLERCFLVYSERTGQSKGYGFAEYMKKDSAARAKSDLLGKPLGPRTLYV 205 Score = 42.4 bits (98), Expect = 0.009 Identities = 46/212 (21%), Positives = 83/212 (39%), Gaps = 5/212 (2%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L V +L S+ Q ++ GS+ + T S GY + + AARA L Sbjct: 134 LCVANLPPSLTQQQFEELVRPFGSLERCFLVYSERTGQSKGYGFAEYMKKDSAARAKSDL 193 Query: 473 NFTPVNGKPIRIMYSNRD---PSSRKSGAANIFIKNLDKSI-DNKALYDTFSAFGNILSC 640 P+ + + + +++ P+ S + + L D AL SA + C Sbjct: 194 LGKPLGPRTLYVHWTDAGQLTPALLHSRC--LCVDRLPPGFNDVDALCRALSAVHSPTFC 251 Query: 641 KVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPK 820 ++A G+ KG+ ++YE E A+ A + +G+ L + V ++ + Sbjct: 252 QLACGQDGQLKGFAVLEYETAEMAEEAQQQADGLSLGGSHLRVSFCAPGPPGRSMLAALI 311 Query: 821 FNNVYVKNLSES-TTEDNLKELFGNFGPITSV 913 N + E N+ +L N GP S+ Sbjct: 312 AAQATALNRGKGLLPEPNILQLLNNLGPSASL 343
>Q5RDA3:CSTF2_PONPY Cleavage stimulation factor 64 kDa subunit - Pongo pygmaeus| (Orangutan) Length = 577 Score = 56.6 bits (135), Expect = 4e-07 Identities = 26/83 (31%), Positives = 49/83 (59%), Gaps = 1/83 (1%) Frame = +2 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHAVED 1003 +V+V N+ TE+ LK++F GP+ S +V + GK + +GF +++ + A+ A+ + Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76 Query: 1004 LNGKKFDDKELYVGRAQKKSERE 1072 LNG++F + L V A + +E Sbjct: 77 LNGREFSGRALRVDNAASEKNKE 99 Score = 54.3 bits (129), Expect = 2e-06 Identities = 32/132 (24%), Positives = 67/132 (50%), Gaps = 5/132 (3%) Frame = +2 Query: 521 RDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYE 697 RDP+ +S ++F+ N+ + L D FS G ++S ++ + +G+ KGYGF +Y+ Sbjct: 7 RDPAVDRS-LRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQ 65 Query: 698 QDESAQNAINELNGMLLNDKKVYVGPFVRKQERENV----FGSPKFNNVYVKNLSESTTE 865 E+A +A+ LNG + + + V ++ +E + G+P + Y + +S Sbjct: 66 DQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPVIESPYGETISPEDAP 125 Query: 866 DNLKELFGNFGP 901 +++ + + P Sbjct: 126 ESISKAVASLPP 137 Score = 47.0 bits (110), Expect = 4e-04 Identities = 23/72 (31%), Positives = 38/72 (52%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 ++VG++ + QL D+FS+VG VVS R+ D T GY + + A A+ L Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 473 NFTPVNGKPIRI 508 N +G+ +R+ Sbjct: 78 NGREFSGRALRV 89
>Q8BIQ5:CSTF2_MOUSE Cleavage stimulation factor 64 kDa subunit - Mus musculus (Mouse)| Length = 580 Score = 56.6 bits (135), Expect = 4e-07 Identities = 26/83 (31%), Positives = 49/83 (59%), Gaps = 1/83 (1%) Frame = +2 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHAVED 1003 +V+V N+ TE+ LK++F GP+ S +V + GK + +GF +++ + A+ A+ + Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76 Query: 1004 LNGKKFDDKELYVGRAQKKSERE 1072 LNG++F + L V A + +E Sbjct: 77 LNGREFSGRALRVDNAASEKNKE 99 Score = 54.7 bits (130), Expect = 2e-06 Identities = 32/132 (24%), Positives = 68/132 (51%), Gaps = 5/132 (3%) Frame = +2 Query: 521 RDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYE 697 RDP+ +S ++F+ N+ + L D FS G ++S ++ + +G+ KGYGF +Y+ Sbjct: 7 RDPAVDRS-LRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQ 65 Query: 698 QDESAQNAINELNGMLLNDKKVYVGPFVRKQERENV----FGSPKFNNVYVKNLSESTTE 865 E+A +A+ LNG + + + V ++ +E + G+P + Y +++S Sbjct: 66 DQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPVIESPYGESISPEDAP 125 Query: 866 DNLKELFGNFGP 901 +++ + + P Sbjct: 126 ESISKAVASLPP 137 Score = 47.0 bits (110), Expect = 4e-04 Identities = 23/72 (31%), Positives = 38/72 (52%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 ++VG++ + QL D+FS+VG VVS R+ D T GY + + A A+ L Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 473 NFTPVNGKPIRI 508 N +G+ +R+ Sbjct: 78 NGREFSGRALRV 89
>P33240:CSTF2_HUMAN Cleavage stimulation factor 64 kDa subunit - Homo sapiens (Human)| Length = 577 Score = 56.6 bits (135), Expect = 4e-07 Identities = 26/83 (31%), Positives = 49/83 (59%), Gaps = 1/83 (1%) Frame = +2 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHAVED 1003 +V+V N+ TE+ LK++F GP+ S +V + GK + +GF +++ + A+ A+ + Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76 Query: 1004 LNGKKFDDKELYVGRAQKKSERE 1072 LNG++F + L V A + +E Sbjct: 77 LNGREFSGRALRVDNAASEKNKE 99 Score = 54.3 bits (129), Expect = 2e-06 Identities = 32/132 (24%), Positives = 67/132 (50%), Gaps = 5/132 (3%) Frame = +2 Query: 521 RDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYE 697 RDP+ +S ++F+ N+ + L D FS G ++S ++ + +G+ KGYGF +Y+ Sbjct: 7 RDPAVDRS-LRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQ 65 Query: 698 QDESAQNAINELNGMLLNDKKVYVGPFVRKQERENV----FGSPKFNNVYVKNLSESTTE 865 E+A +A+ LNG + + + V ++ +E + G+P + Y + +S Sbjct: 66 DQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPVIESPYGETISPEDAP 125 Query: 866 DNLKELFGNFGP 901 +++ + + P Sbjct: 126 ESISKAVASLPP 137 Score = 47.0 bits (110), Expect = 4e-04 Identities = 23/72 (31%), Positives = 38/72 (52%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 ++VG++ + QL D+FS+VG VVS R+ D T GY + + A A+ L Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 473 NFTPVNGKPIRI 508 N +G+ +R+ Sbjct: 78 NGREFSGRALRV 89
>Q8HXM1:CSTF2_BOVIN Cleavage stimulation factor 64 kDa subunit - Bos taurus (Bovine)| Length = 572 Score = 56.6 bits (135), Expect = 4e-07 Identities = 26/83 (31%), Positives = 49/83 (59%), Gaps = 1/83 (1%) Frame = +2 Query: 827 NVYVKNLSESTTEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVHAVED 1003 +V+V N+ TE+ LK++F GP+ S +V + GK + +GF +++ + A+ A+ + Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76 Query: 1004 LNGKKFDDKELYVGRAQKKSERE 1072 LNG++F + L V A + +E Sbjct: 77 LNGREFSGRALRVDNAASEKNKE 99 Score = 54.3 bits (129), Expect = 2e-06 Identities = 32/132 (24%), Positives = 67/132 (50%), Gaps = 5/132 (3%) Frame = +2 Query: 521 RDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYE 697 RDP+ +S ++F+ N+ + L D FS G ++S ++ + +G+ KGYGF +Y+ Sbjct: 7 RDPAVDRS-LRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQ 65 Query: 698 QDESAQNAINELNGMLLNDKKVYVGPFVRKQERENV----FGSPKFNNVYVKNLSESTTE 865 E+A +A+ LNG + + + V ++ +E + G+P + Y + +S Sbjct: 66 DQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPVIESPYGETISPEDAP 125 Query: 866 DNLKELFGNFGP 901 +++ + + P Sbjct: 126 ESISKAVASLPP 137 Score = 47.0 bits (110), Expect = 4e-04 Identities = 23/72 (31%), Positives = 38/72 (52%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 ++VG++ + QL D+FS+VG VVS R+ D T GY + + A A+ L Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 473 NFTPVNGKPIRI 508 N +G+ +R+ Sbjct: 78 NGREFSGRALRV 89
>Q7T2T1:CELF2_CHICK CUG-BP- and ETR-3-like factor 2 - Gallus gallus (Chicken)| Length = 484 Score = 56.6 bits (135), Expect = 4e-07 Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 8/155 (5%) Frame = +2 Query: 296 YVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRD--VNTRMSLGYAYVNF---SSPADAARA 460 +VG + S + +L ++F G+V + V RD N S G +V F + +A A Sbjct: 19 FVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNA 78 Query: 461 LEMLNFTPVNGKPIRIMYSNRDPSSRKSGAAN---IFIKNLDKSIDNKALYDTFSAFGNI 631 L + P PI++ + S KS A +FI + K + + FS FG I Sbjct: 79 LHNIKTLPGMHHPIQM----KPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQI 134 Query: 632 LSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 C++ G S+G FV + AQNAI ++ Sbjct: 135 EECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMH 169 Score = 51.6 bits (122), Expect = 1e-05 Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%) Frame = +2 Query: 533 SRKSG--AANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFVQYEQD 703 S+K G AN+FI +L + ++ + F FGN++S KV + + SK +GFV Y+ Sbjct: 391 SQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNP 450 Query: 704 ESAQNAINELNGMLLNDKKVYV 769 SAQ AI +NG + K++ V Sbjct: 451 VSAQAAIQAMNGFQIGMKRLKV 472 Score = 48.5 bits (114), Expect = 1e-04 Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 1/87 (1%) Frame = +2 Query: 1127 QGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSN-GVNKGSGFVAFKSSEDATR 1303 +G NL++ +L D + L ++F FG + S KV D ++K GFV++ + A Sbjct: 397 EGANLFIYHLPQEFGDQDIL-QMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQA 455 Query: 1304 ALVAMNGKMVGSKPLYVALAQRKEERR 1384 A+ AMNG +G K L V L + K + + Sbjct: 456 AIQAMNGFQIGMKRLKVQLKRSKNDSK 482 Score = 47.0 bits (110), Expect = 4e-04 Identities = 23/85 (27%), Positives = 48/85 (56%), Gaps = 1/85 (1%) Frame = +2 Query: 815 PKFNNVYVKNLSESTTEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVH 991 P+ N+++ +L + + ++ ++F FG + S + + S+CFGFV+++NP A Sbjct: 396 PEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQA 455 Query: 992 AVEDLNGKKFDDKELYVGRAQKKSE 1066 A++ +NG + K L V + K++ Sbjct: 456 AIQAMNGFQIGMKRLKVQLKRSKND 480
>Q9IBD0:CELF1_DANRE CUG-BP- and ETR-3-like factor 1 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 501 Score = 56.6 bits (135), Expect = 4e-07 Identities = 46/201 (22%), Positives = 92/201 (45%), Gaps = 7/201 (3%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVR---ADDGKSRCFGFVNFENPDDAVHAVE 1000 ++V + + +ED L+ELF +G + + V+R + +S+ FV + A+ A Sbjct: 18 MFVGQIPRTWSEDQLRELFEPYGAVYEINVLRDRSQNPPQSKGCCFVTYYTRKSALEAQN 77 Query: 1001 DLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDE 1180 L+ K +Q+K + + N DR + K ++ Sbjct: 78 ALHNMKI----------LPGMHHPIQMKPADSEKNNAVEDRKLFVGMISKKC-----NEN 122 Query: 1181 KLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGK--MVG-SKPLY 1351 ++ +F+ +G I C+++R +G+++G FV F + + A A+ +M+ M G S P+ Sbjct: 123 DIRLMFSPYGQIEECRILRGPDGLSRGCAFVTFTARQMAQSAIKSMHQSQTMEGCSSPIV 182 Query: 1352 VALAQ-RKEERRARLQAQFSQ 1411 V A +K++ + R+ Q Q Sbjct: 183 VKFADTQKDKEQKRIAQQLQQ 203 Score = 54.3 bits (129), Expect = 2e-06 Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 8/156 (5%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRD--VNTRMSLGYAYVNF---SSPADAAR 457 ++VG + + + QL ++F G+V + V RD N S G +V + S +A Sbjct: 18 MFVGQIPRTWSEDQLRELFEPYGAVYEINVLRDRSQNPPQSKGCCFVTYYTRKSALEAQN 77 Query: 458 ALEMLNFTPVNGKPIRIMYSNRDPSSRKSGAAN---IFIKNLDKSIDNKALYDTFSAFGN 628 AL + P PI++ + S K+ A +F+ + K + + FS +G Sbjct: 78 ALHNMKILPGMHHPIQM----KPADSEKNNAVEDRKLFVGMISKKCNENDIRLMFSPYGQ 133 Query: 629 ILSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 I C++ G S+G FV + + AQ+AI ++ Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTARQMAQSAIKSMH 169 Score = 51.6 bits (122), Expect = 1e-05 Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%) Frame = +2 Query: 533 SRKSG--AANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFVQYEQD 703 S+K G AN+FI +L + ++ L F FGN++S KV + + SK +GFV Y+ Sbjct: 408 SQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNP 467 Query: 704 ESAQNAINELNGMLLNDKKVYV 769 S+Q AI +NG + K++ V Sbjct: 468 VSSQAAIQSMNGFQIGMKRLKV 489 Score = 47.4 bits (111), Expect = 3e-04 Identities = 23/85 (27%), Positives = 48/85 (56%), Gaps = 1/85 (1%) Frame = +2 Query: 815 PKFNNVYVKNLSESTTEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVH 991 P+ N+++ +L + + +L ++F FG + S + + S+CFGFV+++NP + Sbjct: 413 PEGANLFIYHLPQEFGDQDLLQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSSQA 472 Query: 992 AVEDLNGKKFDDKELYVGRAQKKSE 1066 A++ +NG + K L V + K++ Sbjct: 473 AIQSMNGFQIGMKRLKVQLKRSKND 497 Score = 46.6 bits (109), Expect = 5e-04 Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 1/87 (1%) Frame = +2 Query: 1127 QGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSN-GVNKGSGFVAFKSSEDATR 1303 +G NL++ +L D + L ++F FG + S KV D ++K GFV++ + + Sbjct: 414 EGANLFIYHLPQEFGDQDLL-QMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSSQA 472 Query: 1304 ALVAMNGKMVGSKPLYVALAQRKEERR 1384 A+ +MNG +G K L V L + K + + Sbjct: 473 AIQSMNGFQIGMKRLKVQLKRSKNDSK 499
>O57406:CEL1A_XENLA CUG-BP- and ETR-3-like factor 1-A - Xenopus laevis (African clawed| frog) Length = 489 Score = 56.6 bits (135), Expect = 4e-07 Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 8/156 (5%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRD--VNTRMSLGYAYVNF---SSPADAAR 457 ++VG + S + +L ++F Q G+V + V RD N S G ++ F + +A Sbjct: 18 MFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGCCFITFYTRKAALEAQN 77 Query: 458 ALEMLNFTPVNGKPIRIMYSNRDPSSRKSGAAN---IFIKNLDKSIDNKALYDTFSAFGN 628 AL + P PI++ + S K+ A +FI + K+ + + FS FG Sbjct: 78 ALHNMKVLPGMHHPIQM----KPADSEKNNAVEDRKLFIGMVSKNCNENDIRAMFSPFGQ 133 Query: 629 ILSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 I C++ G S+G FV + AQ AI ++ Sbjct: 134 IEECRILRGPDGMSRGCAFVTFTTRSMAQMAIKSMH 169 Score = 52.0 bits (123), Expect = 1e-05 Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 3/82 (3%) Frame = +2 Query: 533 SRKSG--AANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFVQYEQD 703 S+K G AN+FI +L + ++ L F FGN++S KV + + SK +GFV Y+ Sbjct: 396 SQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSSKVFIDKQTNLSKCFGFVSYDNP 455 Query: 704 ESAQNAINELNGMLLNDKKVYV 769 SAQ AI +NG + K++ V Sbjct: 456 VSAQAAIQSMNGFQIGMKRLKV 477 Score = 48.5 bits (114), Expect = 1e-04 Identities = 24/85 (28%), Positives = 49/85 (57%), Gaps = 1/85 (1%) Frame = +2 Query: 815 PKFNNVYVKNLSESTTEDNLKELFGNFGPI-TSVIVVRADDGKSRCFGFVNFENPDDAVH 991 P+ N+++ +L + + +L ++F FG + +S + + S+CFGFV+++NP A Sbjct: 401 PEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSSKVFIDKQTNLSKCFGFVSYDNPVSAQA 460 Query: 992 AVEDLNGKKFDDKELYVGRAQKKSE 1066 A++ +NG + K L V + K++ Sbjct: 461 AIQSMNGFQIGMKRLKVQLKRSKND 485 Score = 47.8 bits (112), Expect = 2e-04 Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 1/87 (1%) Frame = +2 Query: 1127 QGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSN-GVNKGSGFVAFKSSEDATR 1303 +G NL++ +L D + L ++F FG + S KV D ++K GFV++ + A Sbjct: 402 EGANLFIYHLPQEFGDQDLL-QMFMPFGNVVSSKVFIDKQTNLSKCFGFVSYDNPVSAQA 460 Query: 1304 ALVAMNGKMVGSKPLYVALAQRKEERR 1384 A+ +MNG +G K L V L + K + + Sbjct: 461 AIQSMNGFQIGMKRLKVQLKRSKNDSK 487
>Q13148:TADBP_HUMAN TAR DNA-binding protein 43 - Homo sapiens (Human)| Length = 414 Score = 55.8 bits (133), Expect = 8e-07 Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 3/197 (1%) Frame = +2 Query: 551 ANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYEQDESAQNAIN 727 +++ + L + L + FS FG +L +V ++ +G SKG+GFV++ + E+ ++ Sbjct: 104 SDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMS 163 Query: 728 ELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELFGNFGPIT 907 + + +++ + KQ ++ S K V+V +E TED L+E F +G + Sbjct: 164 QRH--MIDGRWCDCKLPNSKQSQDEPLRSRK---VFVGRCTEDMTEDELREFFSQYGDVM 218 Query: 908 SVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDK--ELYVGRAQKKSEREMQL 1081 V + + R F FV F DD + + L G+ K +++ A+ K QL Sbjct: 219 DVFIPK----PFRAFAFVTF--ADDQI--AQSLCGEDLIIKGISVHISNAEPKHNSNRQL 270 Query: 1082 KESFEKSNKETADRNQG 1132 + S NQG Sbjct: 271 ERSGRFGGNPGGFGNQG 287 Score = 35.8 bits (81), Expect = 0.81 Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 19/113 (16%) Frame = +2 Query: 818 KFNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHA 994 K +++ V L TTE +LKE F FG + V V + G S+ FGFV F + V Sbjct: 102 KTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKV 161 Query: 995 VEDL-------------NGKKFDD-----KELYVGRAQKKSEREMQLKESFEK 1099 + N K+ D ++++VGR + E +L+E F + Sbjct: 162 MSQRHMIDGRWCDCKLPNSKQSQDEPLRSRKVFVGRC-TEDMTEDELREFFSQ 213
>Q09167:SFRS5_RAT Splicing factor, arginine/serine-rich 5 - Rattus norvegicus (Rat)| Length = 269 Score = 55.8 bits (133), Expect = 8e-07 Identities = 46/199 (23%), Positives = 87/199 (43%), Gaps = 8/199 (4%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLN 1009 V++ L+ + E +++ F +G I + + R FGFV FE+P DA AV +L+ Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDLKRG-------FGFVEFEDPRDADDAVYELD 58 Query: 1010 GKKFDDKELYV--GRAQKKSEREMQLKESFEKSNKETADRNQG------TNLYLKNLDGS 1165 GK+ + + + RA+ + R S + DR L ++NL Sbjct: 59 GKELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSR 118 Query: 1166 VDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKP 1345 V + LK+ + G +T D++ G V F S D A+ ++GK + + Sbjct: 119 VSWQD-LKDFMRQAGEVT----FADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRK 173 Query: 1346 LYVALAQRKEERRARLQAQ 1402 + + ++ R+R +++ Sbjct: 174 IKLIEGSKRHRSRSRSRSR 192 Score = 50.8 bits (120), Expect = 2e-05 Identities = 47/211 (22%), Positives = 89/211 (42%), Gaps = 20/211 (9%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 +FI L+ + K + F +G I + +G+GFV++E A +A+ EL+ Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIRDIDL-------KRGFGFVEFEDPRDADDAVYELD 58 Query: 737 GMLLNDKKV-----------------YVGPFVRKQERENVFGSPKF---NNVYVKNLSES 856 G L ++V Y F ++ R + +P N + V+NLS Sbjct: 59 GKELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSR 118 Query: 857 TTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKEL 1036 + +LK+ G +T R + G V F + D +A+E L+GK+ + +++ Sbjct: 119 VSWQDLKDFMRQAGEVTFADAHRPKLNE----GVVEFASYGDLKNAIEKLSGKEINGRKI 174 Query: 1037 YVGRAQKKSEREMQLKESFEKSNKETADRNQ 1129 + K+ R S +S+ + R++ Sbjct: 175 KLIEGSKR-HRSRSRSRSRTRSSSRSRSRSR 204
>P39697:RT19_ARATH 40S ribosomal protein S19, mitochondrial precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 212 Score = 55.8 bits (133), Expect = 8e-07 Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 3/107 (2%) Frame = +2 Query: 800 NVFGSPKF--NNVYVKNLSESTTEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFE 970 ++ GS ++ +Y+ LS T E +LK+ F +F +T ++ G+SR +GFVNF Sbjct: 21 SMLGSLRYMSTKLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFI 80 Query: 971 NPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKE 1111 + D A A+ +NG++ + + V A+ + L ES E++ K+ Sbjct: 81 SEDSANSAISAMNGQELNGFNISVNVAKDWPSLPLSLDESIEEAEKK 127 Score = 53.9 bits (128), Expect = 3e-06 Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 1/75 (1%) Frame = +2 Query: 548 AANIFIKNLDKSIDNKALYDTFSAFGNILSCKVAT-EMSGESKGYGFVQYEQDESAQNAI 724 + ++I L D +L D FS+F + +V T +++G S+GYGFV + ++SA +AI Sbjct: 30 STKLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAI 89 Query: 725 NELNGMLLNDKKVYV 769 + +NG LN + V Sbjct: 90 SAMNGQELNGFNISV 104 Score = 46.6 bits (109), Expect = 5e-04 Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 1/83 (1%) Frame = +2 Query: 1121 RNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDS-NGVNKGSGFVAFKSSEDA 1297 R T LY+ L D+ LK+ F+ F +T +VM + G ++G GFV F S + A Sbjct: 27 RYMSTKLYIGGLSPGTDE-HSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSA 85 Query: 1298 TRALVAMNGKMVGSKPLYVALAQ 1366 A+ AMNG+ + + V +A+ Sbjct: 86 NSAISAMNGQELNGFNISVNVAK 108 Score = 45.1 bits (105), Expect = 0.001 Identities = 27/80 (33%), Positives = 36/80 (45%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 LY+G L + L D FS V RV + T S GY +VNF S A A+ + Sbjct: 33 LYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAM 92 Query: 473 NFTPVNGKPIRIMYSNRDPS 532 N +NG I + + PS Sbjct: 93 NGQELNGFNISVNVAKDWPS 112
>P51592:HYD_DROME E3 ubiquitin-protein ligase hyd - Drosophila melanogaster (Fruit fly)| Length = 2885 Score = 55.8 bits (133), Expect = 8e-07 Identities = 25/67 (37%), Positives = 42/67 (62%) Frame = +2 Query: 1913 LGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKSKVAEAMEVLRSAQQQQ 2092 +GE LYP + + A K+TGMLLE+ ++L +I S + L+ KV EA+E++ Q+ + Sbjct: 2504 IGERLYPKIHSINQTHAPKITGMLLEIPTPQLLSVISSDETLRQKVNEAIEIITFKQKSE 2563 Query: 2093 TNVPADQ 2113 T+ + Q Sbjct: 2564 TSAQSSQ 2570
>Q92879:CELF1_HUMAN CUG-BP- and ETR-3-like factor 1 - Homo sapiens (Human)| Length = 486 Score = 55.8 bits (133), Expect = 8e-07 Identities = 46/197 (23%), Positives = 88/197 (44%), Gaps = 6/197 (3%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVR---ADDGKSRCFGFVNFENPDDAVHAVE 1000 ++V + + +E +L+ELF +G + + V+R + +S+ FV F A+ A Sbjct: 18 MFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQN 77 Query: 1001 DLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDE 1180 L+ K +Q+K + + N DR + K + Sbjct: 78 ALHNMK----------VLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCT-----EN 122 Query: 1181 KLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMN--GKMVG-SKPLY 1351 ++ +F+ FG I C+++R +G+++G FV F + A A+ AM+ M G S P+ Sbjct: 123 DIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMV 182 Query: 1352 VALAQRKEERRARLQAQ 1402 V A ++++ + AQ Sbjct: 183 VKFADTQKDKEQKRMAQ 199 Score = 54.3 bits (129), Expect = 2e-06 Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 8/156 (5%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRD--VNTRMSLGYAYVNF---SSPADAAR 457 ++VG + + + L ++F Q G+V + V RD N S G +V F + +A Sbjct: 18 MFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQN 77 Query: 458 ALEMLNFTPVNGKPIRIMYSNRDPSSRKSGAAN---IFIKNLDKSIDNKALYDTFSAFGN 628 AL + P PI++ + S K+ A +FI + K + FS+FG Sbjct: 78 ALHNMKVLPGMHHPIQM----KPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQ 133 Query: 629 ILSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 I C++ G S+G FV + AQ AI ++ Sbjct: 134 IEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAMH 169 Score = 52.4 bits (124), Expect = 8e-06 Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 3/82 (3%) Frame = +2 Query: 533 SRKSG--AANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFVQYEQD 703 S+K G AN+FI +L + ++ L F FGN++S KV + + SK +GFV Y+ Sbjct: 393 SQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNP 452 Query: 704 ESAQNAINELNGMLLNDKKVYV 769 SAQ AI +NG + K++ V Sbjct: 453 VSAQAAIQSMNGFQIGMKRLKV 474 Score = 48.9 bits (115), Expect = 9e-05 Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 1/85 (1%) Frame = +2 Query: 815 PKFNNVYVKNLSESTTEDNLKELFGNFGPITSV-IVVRADDGKSRCFGFVNFENPDDAVH 991 P+ N+++ +L + + +L ++F FG + S + + S+CFGFV+++NP A Sbjct: 398 PEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQA 457 Query: 992 AVEDLNGKKFDDKELYVGRAQKKSE 1066 A++ +NG + K L V + K++ Sbjct: 458 AIQSMNGFQIGMKRLKVQLKRSKND 482 Score = 48.1 bits (113), Expect = 2e-04 Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 1/87 (1%) Frame = +2 Query: 1127 QGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSN-GVNKGSGFVAFKSSEDATR 1303 +G NL++ +L D + L ++F FG + S KV D ++K GFV++ + A Sbjct: 399 EGANLFIYHLPQEFGDQDLL-QMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQA 457 Query: 1304 ALVAMNGKMVGSKPLYVALAQRKEERR 1384 A+ +MNG +G K L V L + K + + Sbjct: 458 AIQSMNGFQIGMKRLKVQLKRSKNDSK 484
>Q24207:BOULE_DROME Protein boule - Drosophila melanogaster (Fruit fly)| Length = 228 Score = 55.8 bits (133), Expect = 8e-07 Identities = 26/78 (33%), Positives = 44/78 (56%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELN 736 IF+ + L FSA+G + S K+ + +G SKGYGFV +E ++ AQ + Sbjct: 35 IFVGGISGDTTEADLTRVFSAYGTVKSTKIIVDRAGVSKGYGFVTFETEQEAQRLQADGE 94 Query: 737 GMLLNDKKVYVGPFVRKQ 790 ++L D+K+ + P ++KQ Sbjct: 95 CVVLRDRKLNIAPAIKKQ 112 Score = 46.2 bits (108), Expect = 6e-04 Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 5/99 (5%) Frame = +2 Query: 797 ENVFGSPKF-----NNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFV 961 E +PK+ N ++V +S TTE +L +F +G + S ++ G S+ +GFV Sbjct: 19 ETPLAAPKYGTLIPNRIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVDRAGVSKGYGFV 78 Query: 962 NFENPDDAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQ 1078 FE +A D D++L + A KK +Q Sbjct: 79 TFETEQEAQRLQADGECVVLRDRKLNIAPAIKKQPNPLQ 117 Score = 42.7 bits (99), Expect = 0.007 Identities = 22/79 (27%), Positives = 45/79 (56%) Frame = +2 Query: 1139 LYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAM 1318 +++ + G + + L +F+ +GT+ S K++ D GV+KG GFV F++ ++A R Sbjct: 35 IFVGGISGDTTEAD-LTRVFSAYGTVKSTKIIVDRAGVSKGYGFVTFETEQEAQRLQADG 93 Query: 1319 NGKMVGSKPLYVALAQRKE 1375 ++ + L +A A +K+ Sbjct: 94 ECVVLRDRKLNIAPAIKKQ 112 Score = 33.1 bits (74), Expect = 5.3 Identities = 18/55 (32%), Positives = 29/55 (52%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAAR 457 ++VG + +A L VFS G+V S ++ D +S GY +V F + +A R Sbjct: 35 IFVGGISGDTTEADLTRVFSAYGTVKSTKIIVD-RAGVSKGYGFVTFETEQEAQR 88
>P92965:RSP40_ARATH Arginine/serine-rich-splicing factor RSP40 - Arabidopsis thaliana| (Mouse-ear cress) Length = 350 Score = 55.5 bits (132), Expect = 1e-06 Identities = 49/185 (26%), Positives = 81/185 (43%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDLN 1009 V+ N E +L+ LF +G + V D K+ F FV E+ DA A+ L+ Sbjct: 4 VFCGNFEYDAREGDLERLFRKYGKVERV------DMKAG-FAFVYMEDERDAEDAIRALD 56 Query: 1010 GKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLK 1189 +F K + KSER K S S + ++ L++ N D L+ Sbjct: 57 RFEFGRKGRRLRVEWTKSERGGD-KRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLE 115 Query: 1190 ELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQR 1369 + F +G I + ++ R+ F+ +++ EDATRAL A N + K + V A + Sbjct: 116 KHFEPYGKIVNVRIRRNF-------AFIQYEAQEDATRALDASNNSKLMDKVISVEYAVK 168 Query: 1370 KEERR 1384 ++ R Sbjct: 169 DDDAR 173
>Q4R813:HNRGT_MACFA Testis-specific heterogeneous nuclear ribonucleoprotein G-T - Macaca| fascicularis (Crab eating macaque) (Cynomolgus monkey) Length = 394 Score = 55.5 bits (132), Expect = 1e-06 Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 2/113 (1%) Frame = +2 Query: 830 VYVKNLSESTTEDNLKELFGNFGPITSVIVVR-ADDGKSRCFGFVNFENPDDAVHAVEDL 1006 +++ L+ T E L+ FG +G I V++++ + KSR F FV FE+P +A A D+ Sbjct: 10 LFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPANAKAAARDM 69 Query: 1007 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNK-ETADRNQGTNLYLKNLDG 1162 NGK D K + V +A K +FE S + R++G +L+ G Sbjct: 70 NGKSLDGKAIKVAQA---------TKPAFESSRRGPPPPRSRGRPRFLRGTRG 113 Score = 50.1 bits (118), Expect = 4e-05 Identities = 24/77 (31%), Positives = 43/77 (55%) Frame = +2 Query: 293 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 472 L++G L++ + L F + G +V V + +D T S G+A+V F SPA+A A + Sbjct: 10 LFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPANAKAAARDM 69 Query: 473 NFTPVNGKPIRIMYSNR 523 N ++GK I++ + + Sbjct: 70 NGKSLDGKAIKVAQATK 86 Score = 41.6 bits (96), Expect = 0.015 Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 1/88 (1%) Frame = +2 Query: 557 IFIKNLDKSIDNKALYDTFSAFGNILSCKVATEM-SGESKGYGFVQYEQDESAQNAINEL 733 +FI L+ D KAL F +G I+ + + + +S+G+ FV +E +A+ A ++ Sbjct: 10 LFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPANAKAAARDM 69 Query: 734 NGMLLNDKKVYVGPFVRKQERENVFGSP 817 NG L+ K + V + + G P Sbjct: 70 NGKSLDGKAIKVAQATKPAFESSRRGPP 97
>Q62671:EDD1_RAT E3 ubiquitin-protein ligase EDD1 - Rattus norvegicus (Rat)| Length = 920 Score = 55.5 bits (132), Expect = 1e-06 Identities = 32/83 (38%), Positives = 50/83 (60%) Frame = +2 Query: 1889 PPEQQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKSKVAEAMEV 2068 P R LGE LYP V ++ A+K+TGMLLE+ ++L L+ S D+L+++V EAME+ Sbjct: 511 PLPAHRQALGERLYPRVQAMQPAFASKITGMLLELSPAQLLLLLASEDSLRARVEEAMEL 570 Query: 2069 LRSAQQQQTNVPADQLAALSLSD 2137 + + ++ AD + L L D Sbjct: 571 IVAHGREN---GADSILDLGLLD 590 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 375,552,820 Number of extensions: 8091145 Number of successful extensions: 29211 Number of sequences better than 10.0: 619 Number of HSP's gapped: 27884 Number of HSP's successfully gapped: 1632 Length of query: 776 Length of database: 100,686,439 Length adjustment: 121 Effective length of query: 655 Effective length of database: 67,496,744 Effective search space: 44210367320 Effective search space used: 44210367320 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
