| Clone Name | FLbaf151b16 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009274.1| Triticum aestivum clone wlk8.pk0015.b12:fis, full insert mRNA sequence Length = 2056 Score = 3326 bits (1678), Expect = 0.0 Identities = 1954/2043 (95%), Gaps = 6/2043 (0%) Strand = Plus / Plus Query: 263 gcaaccactacggcttttccagcgacgtccctgtacgtgggggatctggacgtgagcgtg 322 |||||| || ||||||| || ||||||||||||||||||||||||||||||||||| ||| Sbjct: 2 gcaaccgctgcggctttcccggcgacgtccctgtacgtgggggatctggacgtgagtgtg 61 Query: 323 caagacgcgcagctctttgacgtcttcagccaggtcggctcggtggtgtctgtgcgcgtg 382 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 caggacgcgcagctctttgacgtcttcagccaggtcggctcggtggtgtctgtgcgcgtg 121 Query: 383 tgccgggacgtcaacaccaggatgtccctaggctacgcgtacgtcaacttcagcagccct 442 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 122 tgccgggacgtcaacaccaggatgtccctaggttacgcgtacgtcaacttcagcagccct 181 Query: 443 gccgatgctgcaagggcattggaaatgctaaacttcactcctgttaatgggaagcctatc 502 ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 182 gccgatgctgcaagggcattggaaatgctgaactttactcctgttaatgggaagcctata 241 Query: 503 aggataatgtattctaaccgtgaccccagctcacgtaaaagtggtgctgcaaatatattt 562 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 242 aggataatgtattctaaccgtgacccaagctcacgtaaaagtggtgctgcaaatatattt 301 Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 302 atcaagaatcttgacaagtcaatagataacaaagcgctctatgacacattttctgccttt 361 Query: 623 ggaaacattctttcatgcaaagttgctacagaaatgtctggagaatccaagggttatggt 682 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 ggaaacattctttcatgcaaagttgctacagaaatgtctggagaatccaagggttatggt 421 Query: 683 tttgttcagtatgagcaggacgaatcagcacaaaatgctattaatgagctcaatgggatg 742 |||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||| Sbjct: 422 tttgttcagtatgagcaggacgaatcagcacagaatgctatcaatgaactcaatgggatg 481 Query: 743 cttttgaatgacaaaaaggtttatgttgggccttttgttcgtaaacaggaaagggaaaat 802 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 482 cttttgaatgacaaaaaggtttatgttgggccttttgttcgtaaacaggaaagggaaaat 541 Query: 803 gtttttggcagtcccaagttcaataatgtgtatgtaaagaatctatcagaatctaccact 862 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 542 gtttttggcagtcccaagttcaataatgtctatgtaaagaatctatcagaatctaccact 601 Query: 863 gaagataatctgaaagaattgtttggtaattttggacctataactagtgttattgtagtg 922 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 602 gaagataatctgagagaattgtttggtaattttggacctataactagtgttattgtagtg 661 Query: 923 cgagcagatgatggtaaatccagatgctttggatttgtgaactttgaaaatccggatgat 982 |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 662 cgaggcgatgatggtaaatccagatgctttggattcgtgaactttgaaaatccggatgat 721 Query: 983 gctgtacatgctgttgaggatttgaatggcaagaaatttgatgataaggaattatatgtt 1042 |||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 722 gctgcatgtgctgttgaggatttgaatggcaagaaatttgatgataaggaattgtatgtt 781 Query: 1043 ggtagagctcagaagaagtctgaaagggagatgcagctgaaagaaagtttcgagaaaagc 1102 |||||||| || ||||||||||||||||||||||| |||| |||| ||| ||||||||| Sbjct: 782 ggtagagcccaaaagaagtctgaaagggagatgcaattgaaggaaaattttgagaaaagc 841 Query: 1103 aataaagagacagccgacaggaatcaaggcactaacttgtatttgaaaaacttggatggt 1162 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 842 aataaagagacagctgacaggaaccaaggcactaacttgtatttgaaaaacttggatggt 901 Query: 1163 agtgttgatgacgatgagaagttaaaagaactttttgccgaatttggcactataacttct 1222 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 902 agtgttgatgacgatgagaagttaaaagaactttttgctgaatttggcactataacttct 961 Query: 1223 tgcaaggttatgcgggattcaaatggggtcaacaaaggatctggttttgttgcatttaaa 1282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 962 tgcaaggttatgcgggattcaaatggggtcaacaaaggatctggttttgttgcatttaaa 1021 Query: 1283 tcttctgaagatgctacacgggctcttgtggcaatgaatggtaaaatggttggcagtaag 1342 ||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||| Sbjct: 1022 tcttctgaagatgcttcacgagctcttgtggcaatgaatggtaaaatggttggcggtaag 1081 Query: 1343 cctctttacgtagcacttgcacaacgaaaggaagaaagaagagccaggctgcaggcgcag 1402 |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||| Sbjct: 1082 cctctttacgtagcacttgcgcaacgcaaggaagaaagaagagccaggctgcaggcacag 1141 Query: 1403 ttttcgcaaatgcgtcctgtgatgccacctccagttgctccacgcatgcccatgtacccc 1462 ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 1142 ttttcgcaaatgcgtcctgtgatgccaccgccagttgctccgcgcatgcccatgtacccc 1201 Query: 1463 cctggtgttcctggtatgggccaacagctattctatggccaaccacctccagcttttgtt 1522 |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1202 cctggtgttcctggaatgggccaacaactattctatggccaaccacctccagcttttgtt 1261 Query: 1523 aacccacagcctggatatggtttccagcaacatatgattcctggaatgagacctggtgtt 1582 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1262 aacccacagcctggatttggtttccagcaacatatgattcctggaatgagacctggtgtt 1321 Query: 1583 gctccgatgccaaattttgtcatgccaatggtccagcaaggtcaacaaccacaacgccca 1642 ||||| ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1322 gctccaatgccaaatttcgtcatgccaatggtgcagcaaggtcagcaaccacaacgccca 1381 Query: 1643 tctgggaggcgtgcaggtgctggtggaatgcagcagccaatgccaatgggtcaccagcag 1702 | ||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1382 tttggaaggcgcgcaggtgctggtggaatgcagcagccaatgccaatgggtcatcagcag 1441 Query: 1703 atggttccaaggggcggtcgtggtggttaccgttatgcgtcgggccgtggcatgcctgag 1762 ||||||||||||||||| |||||||| ||||||||| |||| ||||||||||||||||| Sbjct: 1442 atggttccaaggggcggccgtggtggctaccgttatccgtctggccgtggcatgcctgat 1501 Query: 1763 gctgcattccgtggtgttggaggtatggcgccatctctgtatgagatgggaaggatgact 1822 |||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||| Sbjct: 1502 gctgcattccgtggtgttggagctatggtgccatcgctgtatgagatgggaaggatgact 1561 Query: 1823 cctggtgacactggagcaccgcagcaagtttctagtggagcattggcatctgcacttgcc 1882 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1562 cctggtgacactggagcaccgcagcaagtttctagtggagcattagcatctgcacttgct 1621 Query: 1883 aactctccgccggagcagcaacgactgatgcttggtgaaagcttgtatccacttgttgat 1942 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1622 aactctccgccggagcagcaacgactgatgcttggtgaaagcttgtacccacttgttgat 1681 Query: 1943 cagctggagcatgatcaggctgccaaggttaccggtatgcttttggagatggaccaaact 2002 |||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||| ||| Sbjct: 1682 cagctggagcatgaccaggctgccaaggttactggtatgcttctggagatggaccagact 1741 Query: 2003 gaggttcttcatctaatcgagtcacctgatgctttgaagtctaaggtcgctgaagctatg 2062 |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1742 gaggcccttcatctaatcgagtcacctgatgctctgaagtctaaggtcgctgaagctatg 1801 Query: 2063 gaggttctccgcagcgctcagcagcagcagaccaatgttccagctgatcagctggctgct 2122 |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1802 gaggttctccgcagtgctcagcagcagcaaaccaatgttccagctgatcagctggctgct 1861 Query: 2123 ctttcgttgagcgatggctttgttgcttcttagttggaacttttcttgcttgttcctggt 2182 |||||| |||||||||||||||||||||||||||||||| | |||||||| ||||| Sbjct: 1862 ctttcgctgagcgatggctttgttgcttcttagttggaa----tgctgcttgtttctggt 1917 Query: 2183 tactgtatgtgcttggtgcttcagactctggaagtctctagttttattcaaatagattta 2242 | |||||||||||||||||||||||| ||| || | |||||||||| ||||||||||||| Sbjct: 1918 ttctgtatgtgcttggtgcttcagac-ctgaaattgtctagttttactcaaatagattta 1976 Query: 2243 actgtggatttcaacatattgtactc-ttatatttgtttaaatattgagattaaaaaatg 2301 |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 1977 actgtggatttcaacatattgtactctttatatttgtttaaatattgagattgaaaaatg 2036 Query: 2302 ata 2304 ||| Sbjct: 2037 ata 2039
>ref|NM_001068050.1| Oryza sativa (japonica cultivar-group) Os08g0314800 (Os08g0314800) mRNA, complete cds Length = 2410 Score = 1637 bits (826), Expect = 0.0 Identities = 1590/1844 (86%), Gaps = 3/1844 (0%) Strand = Plus / Plus Query: 284 gcgacgtccctgtacgtgggggatctggacgtgagcgtgcaagacgcgcagctctttgac 343 |||||||| |||||||||||||| || |||||||||||||| ||||||||||| || ||| Sbjct: 277 gcgacgtcgctgtacgtgggggacctcgacgtgagcgtgcaggacgcgcagctgttcgac 336 Query: 344 gtcttcagccaggtcggctcggtggtgtctgtgcgcgtgtgccgggacgtcaacaccagg 403 ||||||||||||||||| |||||||| || |||||||| |||||||||||||| |||||| Sbjct: 337 gtcttcagccaggtcggatcggtggtatcggtgcgcgtttgccgggacgtcaataccagg 396 Query: 404 atgtccctaggctacgcgtacgtcaacttcagcagccctgccgatgctgcaagggcattg 463 |||| || || ||||| || |||||||||||||| || ||||||||||||||||||||| Sbjct: 397 ctgtcgctgggttacgcctatgtcaacttcagcagtcccgccgatgctgcaagggcattg 456 Query: 464 gaaatgctaaacttcactcctgttaatgggaagcctatcaggataatgtattctaaccgt 523 |||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 457 gaaatgctgaacttcactcctattaacgggaagcctatcaggataatgtattctaaccgt 516 Query: 524 gaccccagctcacgtaaaagtggtgctgcaaatatatttatcaagaatcttgacaagtca 583 ||||||||||||||||||||||| || ||||| |||||||| |||||||||||||||||| Sbjct: 517 gaccccagctcacgtaaaagtggagcagcaaacatatttattaagaatcttgacaagtca 576 Query: 584 atagataacaaagcgctatatgacacattttctgcctttggaaacattctttcatgcaaa 643 |||||||||||||| || |||||||||||||||| ||||| || |||||||| || ||| Sbjct: 577 atagataacaaagctctctatgacacattttctgtatttgggaatattctttcgtgtaaa 636 Query: 644 gttgctacagaaatgtctggagaatccaagggttatggttttgttcagtatgagcaggac 703 || || || |||||||||||||| || ||||| |||||||||||||||| ||||| ||| Sbjct: 637 gtcgcgacggaaatgtctggagagtcgaagggatatggttttgttcagtttgagctggaa 696 Query: 704 gaatcagcacaaaatgctattaatgagctcaatgggatgcttttgaatgacaaaaaggtt 763 ||| | || || |||||||| | | |||||||||||||||||||||||||||||||||| Sbjct: 697 gaagctgcccagaatgctatcagtaagctcaatgggatgcttttgaatgacaaaaaggtg 756 Query: 764 tatgttgggccttttgttcgtaaacaggaaagggaaaatgtttttggcagtcccaagttc 823 ||||| ||||||||||||||||||||||| ||||||||||| | |||| |||||| || Sbjct: 757 tatgtagggccttttgttcgtaaacaggagagggaaaatgtatcaggcaatcccaaattt 816 Query: 824 aataatgtgtatgtaaagaatctatcagaatctaccactgaagataatctgaaagaattg 883 || ||||||||||||||||| ||||| ||||| || |||||||||||| | || ||| | Sbjct: 817 aacaatgtgtatgtaaagaacctatcggaatcaacaactgaagataatttaaaggaaatt 876 Query: 884 tttggtaattttggacctataactagtgttattgtagtgcgagcagatgatggtaaatcc 943 |||||||| |||||||| ||||||||||| ||||| |||| | || |||||| ||||| Sbjct: 877 tttggtaaatttggacccataactagtgtcgttgtaatgcgtgaaggtgatgggaaatct 936 Query: 944 agatgctttggatttgtgaactttgaaaatccggatgatgctgtacatgctgttgaggat 1003 ||||||||||||||||| |||||||||||||| |||||||||| | |||||||| ||| Sbjct: 937 agatgctttggatttgttaactttgaaaatccagatgatgctgctcgagctgttgaagat 996 Query: 1004 ttgaatggcaagaaatttgatgataaggaattatatgttggtagagctcagaagaagtct 1063 |||||||||||||| |||||||| ||||||| |||||| ||||||| ||||||||||| Sbjct: 997 ttgaatggcaagaagtttgatgacaaggaatggtatgtttgtagagcacagaagaagtca 1056 Query: 1064 gaaagggagatgcagctgaaagaaagtttcgagaaaagcaataaagagacagccgacagg 1123 || ||||||||| | ||||||||| || ||||| | || |||||| |||| || | | Sbjct: 1057 gagagggagatggaattgaaagaaaaatttgagaagaacatcaaagaggcagcagataag 1116 Query: 1124 aatcaaggcactaacttgtatttgaaaaacttggatggtagtgttgatgacgatgagaag 1183 || || || |||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 1117 aaccagggaactaacttgtatttgaaaaacttggatgatagcatcgatgacgatgagaaa 1176 Query: 1184 ttaaaagaactttttgccgaatttggcactataacttcttgcaaggttatgcgggattca 1243 ||||||||| ||||||| || ||||| ||||| || ||||| ||||| ||| | |||| Sbjct: 1177 ttaaaagaaatttttgctgattttggtactattacctcttgtaaggtcatgagagatttg 1236 Query: 1244 aatggggtcaacaaaggatctggttttgttgcatttaaatcttctgaagatgctacacgg 1303 ||||| || | ||||||||||| |||||||||||||| ||| ||||||||||| |||| Sbjct: 1237 aatggtgttagtaaaggatctggctttgttgcatttaagtctgctgaagatgcttcacga 1296 Query: 1304 gctcttgtggcaatgaatggtaaaatggttggcagtaagcctctttacgtagcacttgca 1363 ||||||||||| ||||||||||| ||| |||||||||| ||||| || |||||||||||| Sbjct: 1297 gctcttgtggctatgaatggtaagatgattggcagtaaacctctctatgtagcacttgca 1356 Query: 1364 caacgaaaggaagaaagaagagccaggctgcaggcgcagttttcgcaaatgcgtcct--- 1420 ||||| |||||||||||||| || ||||| ||||| ||||| || |||||||||||| Sbjct: 1357 caacgcaaggaagaaagaagggcaaggcttcaggcacagttctcacaaatgcgtcctatg 1416 Query: 1421 gtgatgccacctccagttgctccacgcatgcccatgtacccccctggtgttcctggtatg 1480 |||||||| ||| |||||||||| || ||||||||||| ||||||||||| |||||| | Sbjct: 1417 gtgatgcctccttcagttgctcctcgtatgcccatgtatccccctggtgtccctggtgta 1476 Query: 1481 ggccaacagctattctatggccaaccacctccagcttttgttaacccacagcctggatat 1540 ||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||| | Sbjct: 1477 ggccaacagctgttttatggccagccacctccagcttttgttaaccctcagcctggattt 1536 Query: 1541 ggtttccagcaacatatgattcctggaatgagacctggtgttgctccgatgccaaatttt 1600 || |||||||||||| | |||||||| ||||| ||| |||||| || || ||||||||| Sbjct: 1537 ggcttccagcaacatctcattcctggtatgaggcctagtgttggaccaattccaaatttt 1596 Query: 1601 gtcatgccaatggtccagcaaggtcaacaaccacaacgcccatctgggaggcgtgcaggt 1660 |||||||| ||||||||||||||||||||||||||||| ||| |||| ||||||||||| Sbjct: 1597 gtcatgcctatggtccagcaaggtcaacaaccacaacgtccagctggaaggcgtgcaggc 1656 Query: 1661 gctggtggaatgcagcagccaatgccaatgggtcaccagcagatggttccaaggggcggt 1720 |||||||||| ||||| |||||||||||||| |||||||| ||| |||||||||| || Sbjct: 1657 actggtggaattcagcaaccaatgccaatgggccaccagcaaatgcttccaaggggtagt 1716 Query: 1721 cgtggtggttaccgttatgcgtcgggccgtggcatgcctgaggctgcattccgtggtgtt 1780 |||||||||||||||||||| || || ||||||||||| || |||||||||||||||| Sbjct: 1717 cgtggtggttaccgttatgcttctggtcgtggcatgccagacaatgcattccgtggtgtt 1776 Query: 1781 ggaggtatggcgccatctctgtatgagatgggaaggatgactcctggtgacactggagca 1840 |||||| | | |||||| | |||||||||||||| ||| ||| |||| |||| ||| Sbjct: 1777 ggaggtttagtgccatccccatatgagatgggaagaatgcctctcagtgatgctggtgca 1836 Query: 1841 ccgcagcaagtttctagtggagcattggcatctgcacttgccaactctccgccggagcag 1900 || | ||| ||| | | |||||||||||| |||||||| ||||| || || || || ||| Sbjct: 1837 ccaccgcaggttccaattggagcattggcctctgcactggccaattcacccccagatcag 1896 Query: 1901 caacgactgatgcttggtgaaagcttgtatccacttgttgatcagctggagcatgatcag 1960 ||| ||||||||||||||||||| || || || ||||||||||||||||||||||||||| Sbjct: 1897 caaagactgatgcttggtgaaagtttatacccgcttgttgatcagctggagcatgatcag 1956 Query: 1961 gctgccaaggttaccggtatgcttttggagatggaccaaactgaggttcttcatctaatc 2020 || || ||||| || || |||||||||||||||||||| ||||| ||||| ||||| || Sbjct: 1957 gcagcgaaggtcactggcatgcttttggagatggaccagactgaagttctccatctcatt 2016 Query: 2021 gagtcacctgatgctttgaagtctaaggtcgctgaagctatggaggttctccgcagcgct 2080 ||||||||||||||| | ||| | ||||||||||| |||||||| |||||||| | ||| Sbjct: 2017 gagtcacctgatgctcttaaggccaaggtcgctgaggctatggaagttctccgtaatgct 2076 Query: 2081 cagcagcagcagaccaatgttccagctgatcagctggctgctct 2124 |||||||||||| | ||| ||| |||||||||| |||||||| Sbjct: 2077 cagcagcagcaggcaaataccccaactgatcagctagctgctct 2120 Score = 46.1 bits (23), Expect = 0.57 Identities = 23/23 (100%) Strand = Plus / Plus Query: 165 tgatggcggcgcaggttcaggcg 187 ||||||||||||||||||||||| Sbjct: 164 tgatggcggcgcaggttcaggcg 186
>dbj|AK098867.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001A12, full insert sequence Length = 2412 Score = 1637 bits (826), Expect = 0.0 Identities = 1590/1844 (86%), Gaps = 3/1844 (0%) Strand = Plus / Plus Query: 284 gcgacgtccctgtacgtgggggatctggacgtgagcgtgcaagacgcgcagctctttgac 343 |||||||| |||||||||||||| || |||||||||||||| ||||||||||| || ||| Sbjct: 279 gcgacgtcgctgtacgtgggggacctcgacgtgagcgtgcaggacgcgcagctgttcgac 338 Query: 344 gtcttcagccaggtcggctcggtggtgtctgtgcgcgtgtgccgggacgtcaacaccagg 403 ||||||||||||||||| |||||||| || |||||||| |||||||||||||| |||||| Sbjct: 339 gtcttcagccaggtcggatcggtggtatcggtgcgcgtttgccgggacgtcaataccagg 398 Query: 404 atgtccctaggctacgcgtacgtcaacttcagcagccctgccgatgctgcaagggcattg 463 |||| || || ||||| || |||||||||||||| || ||||||||||||||||||||| Sbjct: 399 ctgtcgctgggttacgcctatgtcaacttcagcagtcccgccgatgctgcaagggcattg 458 Query: 464 gaaatgctaaacttcactcctgttaatgggaagcctatcaggataatgtattctaaccgt 523 |||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 459 gaaatgctgaacttcactcctattaacgggaagcctatcaggataatgtattctaaccgt 518 Query: 524 gaccccagctcacgtaaaagtggtgctgcaaatatatttatcaagaatcttgacaagtca 583 ||||||||||||||||||||||| || ||||| |||||||| |||||||||||||||||| Sbjct: 519 gaccccagctcacgtaaaagtggagcagcaaacatatttattaagaatcttgacaagtca 578 Query: 584 atagataacaaagcgctatatgacacattttctgcctttggaaacattctttcatgcaaa 643 |||||||||||||| || |||||||||||||||| ||||| || |||||||| || ||| Sbjct: 579 atagataacaaagctctctatgacacattttctgtatttgggaatattctttcgtgtaaa 638 Query: 644 gttgctacagaaatgtctggagaatccaagggttatggttttgttcagtatgagcaggac 703 || || || |||||||||||||| || ||||| |||||||||||||||| ||||| ||| Sbjct: 639 gtcgcgacggaaatgtctggagagtcgaagggatatggttttgttcagtttgagctggaa 698 Query: 704 gaatcagcacaaaatgctattaatgagctcaatgggatgcttttgaatgacaaaaaggtt 763 ||| | || || |||||||| | | |||||||||||||||||||||||||||||||||| Sbjct: 699 gaagctgcccagaatgctatcagtaagctcaatgggatgcttttgaatgacaaaaaggtg 758 Query: 764 tatgttgggccttttgttcgtaaacaggaaagggaaaatgtttttggcagtcccaagttc 823 ||||| ||||||||||||||||||||||| ||||||||||| | |||| |||||| || Sbjct: 759 tatgtagggccttttgttcgtaaacaggagagggaaaatgtatcaggcaatcccaaattt 818 Query: 824 aataatgtgtatgtaaagaatctatcagaatctaccactgaagataatctgaaagaattg 883 || ||||||||||||||||| ||||| ||||| || |||||||||||| | || ||| | Sbjct: 819 aacaatgtgtatgtaaagaacctatcggaatcaacaactgaagataatttaaaggaaatt 878 Query: 884 tttggtaattttggacctataactagtgttattgtagtgcgagcagatgatggtaaatcc 943 |||||||| |||||||| ||||||||||| ||||| |||| | || |||||| ||||| Sbjct: 879 tttggtaaatttggacccataactagtgtcgttgtaatgcgtgaaggtgatgggaaatct 938 Query: 944 agatgctttggatttgtgaactttgaaaatccggatgatgctgtacatgctgttgaggat 1003 ||||||||||||||||| |||||||||||||| |||||||||| | |||||||| ||| Sbjct: 939 agatgctttggatttgttaactttgaaaatccagatgatgctgctcgagctgttgaagat 998 Query: 1004 ttgaatggcaagaaatttgatgataaggaattatatgttggtagagctcagaagaagtct 1063 |||||||||||||| |||||||| ||||||| |||||| ||||||| ||||||||||| Sbjct: 999 ttgaatggcaagaagtttgatgacaaggaatggtatgtttgtagagcacagaagaagtca 1058 Query: 1064 gaaagggagatgcagctgaaagaaagtttcgagaaaagcaataaagagacagccgacagg 1123 || ||||||||| | ||||||||| || ||||| | || |||||| |||| || | | Sbjct: 1059 gagagggagatggaattgaaagaaaaatttgagaagaacatcaaagaggcagcagataag 1118 Query: 1124 aatcaaggcactaacttgtatttgaaaaacttggatggtagtgttgatgacgatgagaag 1183 || || || |||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 1119 aaccagggaactaacttgtatttgaaaaacttggatgatagcatcgatgacgatgagaaa 1178 Query: 1184 ttaaaagaactttttgccgaatttggcactataacttcttgcaaggttatgcgggattca 1243 ||||||||| ||||||| || ||||| ||||| || ||||| ||||| ||| | |||| Sbjct: 1179 ttaaaagaaatttttgctgattttggtactattacctcttgtaaggtcatgagagatttg 1238 Query: 1244 aatggggtcaacaaaggatctggttttgttgcatttaaatcttctgaagatgctacacgg 1303 ||||| || | ||||||||||| |||||||||||||| ||| ||||||||||| |||| Sbjct: 1239 aatggtgttagtaaaggatctggctttgttgcatttaagtctgctgaagatgcttcacga 1298 Query: 1304 gctcttgtggcaatgaatggtaaaatggttggcagtaagcctctttacgtagcacttgca 1363 ||||||||||| ||||||||||| ||| |||||||||| ||||| || |||||||||||| Sbjct: 1299 gctcttgtggctatgaatggtaagatgattggcagtaaacctctctatgtagcacttgca 1358 Query: 1364 caacgaaaggaagaaagaagagccaggctgcaggcgcagttttcgcaaatgcgtcct--- 1420 ||||| |||||||||||||| || ||||| ||||| ||||| || |||||||||||| Sbjct: 1359 caacgcaaggaagaaagaagggcaaggcttcaggcacagttctcacaaatgcgtcctatg 1418 Query: 1421 gtgatgccacctccagttgctccacgcatgcccatgtacccccctggtgttcctggtatg 1480 |||||||| ||| |||||||||| || ||||||||||| ||||||||||| |||||| | Sbjct: 1419 gtgatgcctccttcagttgctcctcgtatgcccatgtatccccctggtgtccctggtgta 1478 Query: 1481 ggccaacagctattctatggccaaccacctccagcttttgttaacccacagcctggatat 1540 ||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||| | Sbjct: 1479 ggccaacagctgttttatggccagccacctccagcttttgttaaccctcagcctggattt 1538 Query: 1541 ggtttccagcaacatatgattcctggaatgagacctggtgttgctccgatgccaaatttt 1600 || |||||||||||| | |||||||| ||||| ||| |||||| || || ||||||||| Sbjct: 1539 ggcttccagcaacatctcattcctggtatgaggcctagtgttggaccaattccaaatttt 1598 Query: 1601 gtcatgccaatggtccagcaaggtcaacaaccacaacgcccatctgggaggcgtgcaggt 1660 |||||||| ||||||||||||||||||||||||||||| ||| |||| ||||||||||| Sbjct: 1599 gtcatgcctatggtccagcaaggtcaacaaccacaacgtccagctggaaggcgtgcaggc 1658 Query: 1661 gctggtggaatgcagcagccaatgccaatgggtcaccagcagatggttccaaggggcggt 1720 |||||||||| ||||| |||||||||||||| |||||||| ||| |||||||||| || Sbjct: 1659 actggtggaattcagcaaccaatgccaatgggccaccagcaaatgcttccaaggggtagt 1718 Query: 1721 cgtggtggttaccgttatgcgtcgggccgtggcatgcctgaggctgcattccgtggtgtt 1780 |||||||||||||||||||| || || ||||||||||| || |||||||||||||||| Sbjct: 1719 cgtggtggttaccgttatgcttctggtcgtggcatgccagacaatgcattccgtggtgtt 1778 Query: 1781 ggaggtatggcgccatctctgtatgagatgggaaggatgactcctggtgacactggagca 1840 |||||| | | |||||| | |||||||||||||| ||| ||| |||| |||| ||| Sbjct: 1779 ggaggtttagtgccatccccatatgagatgggaagaatgcctctcagtgatgctggtgca 1838 Query: 1841 ccgcagcaagtttctagtggagcattggcatctgcacttgccaactctccgccggagcag 1900 || | ||| ||| | | |||||||||||| |||||||| ||||| || || || || ||| Sbjct: 1839 ccaccgcaggttccaattggagcattggcctctgcactggccaattcacccccagatcag 1898 Query: 1901 caacgactgatgcttggtgaaagcttgtatccacttgttgatcagctggagcatgatcag 1960 ||| ||||||||||||||||||| || || || ||||||||||||||||||||||||||| Sbjct: 1899 caaagactgatgcttggtgaaagtttatacccgcttgttgatcagctggagcatgatcag 1958 Query: 1961 gctgccaaggttaccggtatgcttttggagatggaccaaactgaggttcttcatctaatc 2020 || || ||||| || || |||||||||||||||||||| ||||| ||||| ||||| || Sbjct: 1959 gcagcgaaggtcactggcatgcttttggagatggaccagactgaagttctccatctcatt 2018 Query: 2021 gagtcacctgatgctttgaagtctaaggtcgctgaagctatggaggttctccgcagcgct 2080 ||||||||||||||| | ||| | ||||||||||| |||||||| |||||||| | ||| Sbjct: 2019 gagtcacctgatgctcttaaggccaaggtcgctgaggctatggaagttctccgtaatgct 2078 Query: 2081 cagcagcagcagaccaatgttccagctgatcagctggctgctct 2124 |||||||||||| | ||| ||| |||||||||| |||||||| Sbjct: 2079 cagcagcagcaggcaaataccccaactgatcagctagctgctct 2122
>dbj|AK065167.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002C13, full insert sequence Length = 2387 Score = 1637 bits (826), Expect = 0.0 Identities = 1590/1844 (86%), Gaps = 3/1844 (0%) Strand = Plus / Plus Query: 284 gcgacgtccctgtacgtgggggatctggacgtgagcgtgcaagacgcgcagctctttgac 343 |||||||| |||||||||||||| || |||||||||||||| ||||||||||| || ||| Sbjct: 309 gcgacgtcgctgtacgtgggggacctcgacgtgagcgtgcaggacgcgcagctgttcgac 368 Query: 344 gtcttcagccaggtcggctcggtggtgtctgtgcgcgtgtgccgggacgtcaacaccagg 403 ||||||||||||||||| |||||||| || |||||||| |||||||||||||| |||||| Sbjct: 369 gtcttcagccaggtcggatcggtggtatcggtgcgcgtttgccgggacgtcaataccagg 428 Query: 404 atgtccctaggctacgcgtacgtcaacttcagcagccctgccgatgctgcaagggcattg 463 |||| || || ||||| || |||||||||||||| || ||||||||||||||||||||| Sbjct: 429 ctgtcgctgggttacgcctatgtcaacttcagcagtcccgccgatgctgcaagggcattg 488 Query: 464 gaaatgctaaacttcactcctgttaatgggaagcctatcaggataatgtattctaaccgt 523 |||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 489 gaaatgctgaacttcactcctattaacgggaagcctatcaggataatgtattctaaccgt 548 Query: 524 gaccccagctcacgtaaaagtggtgctgcaaatatatttatcaagaatcttgacaagtca 583 ||||||||||||||||||||||| || ||||| |||||||| |||||||||||||||||| Sbjct: 549 gaccccagctcacgtaaaagtggagcagcaaacatatttattaagaatcttgacaagtca 608 Query: 584 atagataacaaagcgctatatgacacattttctgcctttggaaacattctttcatgcaaa 643 |||||||||||||| || |||||||||||||||| ||||| || |||||||| || ||| Sbjct: 609 atagataacaaagctctctatgacacattttctgtatttgggaatattctttcgtgtaaa 668 Query: 644 gttgctacagaaatgtctggagaatccaagggttatggttttgttcagtatgagcaggac 703 || || || |||||||||||||| || ||||| |||||||||||||||| ||||| ||| Sbjct: 669 gtcgcgacggaaatgtctggagagtcgaagggatatggttttgttcagtttgagctggaa 728 Query: 704 gaatcagcacaaaatgctattaatgagctcaatgggatgcttttgaatgacaaaaaggtt 763 ||| | || || |||||||| | | |||||||||||||||||||||||||||||||||| Sbjct: 729 gaagctgcccagaatgctatcagtaagctcaatgggatgcttttgaatgacaaaaaggtg 788 Query: 764 tatgttgggccttttgttcgtaaacaggaaagggaaaatgtttttggcagtcccaagttc 823 ||||| ||||||||||||||||||||||| ||||||||||| | |||| |||||| || Sbjct: 789 tatgtagggccttttgttcgtaaacaggagagggaaaatgtatcaggcaatcccaaattt 848 Query: 824 aataatgtgtatgtaaagaatctatcagaatctaccactgaagataatctgaaagaattg 883 || ||||||||||||||||| ||||| ||||| || |||||||||||| | || ||| | Sbjct: 849 aacaatgtgtatgtaaagaacctatcggaatcaacaactgaagataatttaaaggaaatt 908 Query: 884 tttggtaattttggacctataactagtgttattgtagtgcgagcagatgatggtaaatcc 943 |||||||| |||||||| ||||||||||| ||||| |||| | || |||||| ||||| Sbjct: 909 tttggtaaatttggacccataactagtgtcgttgtaatgcgtgaaggtgatgggaaatct 968 Query: 944 agatgctttggatttgtgaactttgaaaatccggatgatgctgtacatgctgttgaggat 1003 ||||||||||||||||| |||||||||||||| |||||||||| | |||||||| ||| Sbjct: 969 agatgctttggatttgttaactttgaaaatccagatgatgctgctcgagctgttgaagat 1028 Query: 1004 ttgaatggcaagaaatttgatgataaggaattatatgttggtagagctcagaagaagtct 1063 |||||||||||||| |||||||| ||||||| |||||| ||||||| ||||||||||| Sbjct: 1029 ttgaatggcaagaagtttgatgacaaggaatggtatgtttgtagagcacagaagaagtca 1088 Query: 1064 gaaagggagatgcagctgaaagaaagtttcgagaaaagcaataaagagacagccgacagg 1123 || ||||||||| | ||||||||| || ||||| | || |||||| |||| || | | Sbjct: 1089 gagagggagatggaattgaaagaaaaatttgagaagaacatcaaagaggcagcagataag 1148 Query: 1124 aatcaaggcactaacttgtatttgaaaaacttggatggtagtgttgatgacgatgagaag 1183 || || || |||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 1149 aaccagggaactaacttgtatttgaaaaacttggatgatagcatcgatgacgatgagaaa 1208 Query: 1184 ttaaaagaactttttgccgaatttggcactataacttcttgcaaggttatgcgggattca 1243 ||||||||| ||||||| || ||||| ||||| || ||||| ||||| ||| | |||| Sbjct: 1209 ttaaaagaaatttttgctgattttggtactattacctcttgtaaggtcatgagagatttg 1268 Query: 1244 aatggggtcaacaaaggatctggttttgttgcatttaaatcttctgaagatgctacacgg 1303 ||||| || | ||||||||||| |||||||||||||| ||| ||||||||||| |||| Sbjct: 1269 aatggtgttagtaaaggatctggctttgttgcatttaagtctgctgaagatgcttcacga 1328 Query: 1304 gctcttgtggcaatgaatggtaaaatggttggcagtaagcctctttacgtagcacttgca 1363 ||||||||||| ||||||||||| ||| |||||||||| ||||| || |||||||||||| Sbjct: 1329 gctcttgtggctatgaatggtaagatgattggcagtaaacctctctatgtagcacttgca 1388 Query: 1364 caacgaaaggaagaaagaagagccaggctgcaggcgcagttttcgcaaatgcgtcct--- 1420 ||||| |||||||||||||| || ||||| ||||| ||||| || |||||||||||| Sbjct: 1389 caacgcaaggaagaaagaagggcaaggcttcaggcacagttctcacaaatgcgtcctatg 1448 Query: 1421 gtgatgccacctccagttgctccacgcatgcccatgtacccccctggtgttcctggtatg 1480 |||||||| ||| |||||||||| || ||||||||||| ||||||||||| |||||| | Sbjct: 1449 gtgatgcctccttcagttgctcctcgtatgcccatgtatccccctggtgtccctggtgta 1508 Query: 1481 ggccaacagctattctatggccaaccacctccagcttttgttaacccacagcctggatat 1540 ||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||| | Sbjct: 1509 ggccaacagctgttttatggccagccacctccagcttttgttaaccctcagcctggattt 1568 Query: 1541 ggtttccagcaacatatgattcctggaatgagacctggtgttgctccgatgccaaatttt 1600 || |||||||||||| | |||||||| ||||| ||| |||||| || || ||||||||| Sbjct: 1569 ggcttccagcaacatctcattcctggtatgaggcctagtgttggaccaattccaaatttt 1628 Query: 1601 gtcatgccaatggtccagcaaggtcaacaaccacaacgcccatctgggaggcgtgcaggt 1660 |||||||| ||||||||||||||||||||||||||||| ||| |||| ||||||||||| Sbjct: 1629 gtcatgcctatggtccagcaaggtcaacaaccacaacgtccagctggaaggcgtgcaggc 1688 Query: 1661 gctggtggaatgcagcagccaatgccaatgggtcaccagcagatggttccaaggggcggt 1720 |||||||||| ||||| |||||||||||||| |||||||| ||| |||||||||| || Sbjct: 1689 actggtggaattcagcaaccaatgccaatgggccaccagcaaatgcttccaaggggtagt 1748 Query: 1721 cgtggtggttaccgttatgcgtcgggccgtggcatgcctgaggctgcattccgtggtgtt 1780 |||||||||||||||||||| || || ||||||||||| || |||||||||||||||| Sbjct: 1749 cgtggtggttaccgttatgcttctggtcgtggcatgccagacaatgcattccgtggtgtt 1808 Query: 1781 ggaggtatggcgccatctctgtatgagatgggaaggatgactcctggtgacactggagca 1840 |||||| | | |||||| | |||||||||||||| ||| ||| |||| |||| ||| Sbjct: 1809 ggaggtttagtgccatccccatatgagatgggaagaatgcctctcagtgatgctggtgca 1868 Query: 1841 ccgcagcaagtttctagtggagcattggcatctgcacttgccaactctccgccggagcag 1900 || | ||| ||| | | |||||||||||| |||||||| ||||| || || || || ||| Sbjct: 1869 ccaccgcaggttccaattggagcattggcctctgcactggccaattcacccccagatcag 1928 Query: 1901 caacgactgatgcttggtgaaagcttgtatccacttgttgatcagctggagcatgatcag 1960 ||| ||||||||||||||||||| || || || ||||||||||||||||||||||||||| Sbjct: 1929 caaagactgatgcttggtgaaagtttatacccgcttgttgatcagctggagcatgatcag 1988 Query: 1961 gctgccaaggttaccggtatgcttttggagatggaccaaactgaggttcttcatctaatc 2020 || || ||||| || || |||||||||||||||||||| ||||| ||||| ||||| || Sbjct: 1989 gcagcgaaggtcactggcatgcttttggagatggaccagactgaagttctccatctcatt 2048 Query: 2021 gagtcacctgatgctttgaagtctaaggtcgctgaagctatggaggttctccgcagcgct 2080 ||||||||||||||| | ||| | ||||||||||| |||||||| |||||||| | ||| Sbjct: 2049 gagtcacctgatgctcttaaggccaaggtcgctgaggctatggaagttctccgtaatgct 2108 Query: 2081 cagcagcagcagaccaatgttccagctgatcagctggctgctct 2124 |||||||||||| | ||| ||| |||||||||| |||||||| Sbjct: 2109 cagcagcagcaggcaaataccccaactgatcagctagctgctct 2152 Score = 46.1 bits (23), Expect = 0.57 Identities = 23/23 (100%) Strand = Plus / Plus Query: 165 tgatggcggcgcaggttcaggcg 187 ||||||||||||||||||||||| Sbjct: 196 tgatggcggcgcaggttcaggcg 218
>dbj|AK099783.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096A14, full insert sequence Length = 1416 Score = 948 bits (478), Expect = 0.0 Identities = 1005/1180 (85%), Gaps = 3/1180 (0%) Strand = Plus / Plus Query: 948 gctttggatttgtgaactttgaaaatccggatgatgctgtacatgctgttgaggatttga 1007 ||||||||||||| |||||||||||||| |||||||||| | |||||||| ||||||| Sbjct: 1 gctttggatttgttaactttgaaaatccagatgatgctgctcgagctgttgaagatttga 60 Query: 1008 atggcaagaaatttgatgataaggaattatatgttggtagagctcagaagaagtctgaaa 1067 |||||||||| |||||||| ||||||| |||||| ||||||| ||||||||||| || | Sbjct: 61 atggcaagaagtttgatgacaaggaatggtatgtttgtagagcacagaagaagtcagaga 120 Query: 1068 gggagatgcagctgaaagaaagtttcgagaaaagcaataaagagacagccgacaggaatc 1127 |||||||| | ||||||||| || ||||| | || |||||| |||| || | ||| | Sbjct: 121 gggagatggaattgaaagaaaaatttgagaagaacatcaaagaggcagcagataagaacc 180 Query: 1128 aaggcactaacttgtatttgaaaaacttggatggtagtgttgatgacgatgagaagttaa 1187 | || |||||||||||||||||||||||||||| ||| | |||||||||||||| |||| Sbjct: 181 agggaactaacttgtatttgaaaaacttggatgatagcatcgatgacgatgagaaattaa 240 Query: 1188 aagaactttttgccgaatttggcactataacttcttgcaaggttatgcgggattcaaatg 1247 ||||| ||||||| || ||||| ||||| || ||||| ||||| ||| | |||| |||| Sbjct: 241 aagaaatttttgctgattttggtactattacctcttgtaaggtcatgagagatttgaatg 300 Query: 1248 gggtcaacaaaggatctggttttgttgcatttaaatcttctgaagatgctacacgggctc 1307 | || | ||||||||||| |||||||||||||| ||| ||||||||||| |||| |||| Sbjct: 301 gtgttagtaaaggatctggctttgttgcatttaagtctgctgaagatgcttcacgagctc 360 Query: 1308 ttgtggcaatgaatggtaaaatggttggcagtaagcctctttacgtagcacttgcacaac 1367 ||||||| ||||||||||| ||| |||||||||| ||||| || |||||||||||||||| Sbjct: 361 ttgtggctatgaatggtaagatgattggcagtaaacctctctatgtagcacttgcacaac 420 Query: 1368 gaaaggaagaaagaagagccaggctgcaggcgcagttttcgcaaatgcgtcct---gtga 1424 | |||||||||||||| || ||||| ||||| ||||| || |||||||||||| |||| Sbjct: 421 gcaaggaagaaagaagggcaaggcttcaggcacagttctcacaaatgcgtcctatggtga 480 Query: 1425 tgccacctccagttgctccacgcatgcccatgtacccccctggtgttcctggtatgggcc 1484 |||| ||| |||||||||| || ||||||||||| ||||||||||| |||||| | |||| Sbjct: 481 tgcctccttcagttgctcctcgtatgcccatgtatccccctggtgtccctggtgtaggcc 540 Query: 1485 aacagctattctatggccaaccacctccagcttttgttaacccacagcctggatatggtt 1544 ||||||| || |||||||| ||||||||||||||||||||||| |||||||||| ||| | Sbjct: 541 aacagctgttttatggccagccacctccagcttttgttaaccctcagcctggatttggct 600 Query: 1545 tccagcaacatatgattcctggaatgagacctggtgttgctccgatgccaaattttgtca 1604 ||||||||||| | |||||||| ||||| ||| |||||| || || ||||||||||||| Sbjct: 601 tccagcaacatctcattcctggtatgaggcctagtgttggaccaattccaaattttgtca 660 Query: 1605 tgccaatggtccagcaaggtcaacaaccacaacgcccatctgggaggcgtgcaggtgctg 1664 |||| ||||||||||||||||||||||||||||| ||| |||| ||||||||||| ||| Sbjct: 661 tgcctatggtccagcaaggtcaacaaccacaacgtccagctggaaggcgtgcaggcactg 720 Query: 1665 gtggaatgcagcagccaatgccaatgggtcaccagcagatggttccaaggggcggtcgtg 1724 ||||||| ||||| |||||||||||||| |||||||| ||| |||||||||| |||||| Sbjct: 721 gtggaattcagcaaccaatgccaatgggccaccagcaaatgcttccaaggggtagtcgtg 780 Query: 1725 gtggttaccgttatgcgtcgggccgtggcatgcctgaggctgcattccgtggtgttggag 1784 |||||||||||||||| || || ||||||||||| || |||||||||||||||||||| Sbjct: 781 gtggttaccgttatgcttctggtcgtggcatgccagacaatgcattccgtggtgttggag 840 Query: 1785 gtatggcgccatctctgtatgagatgggaaggatgactcctggtgacactggagcaccgc 1844 || | | |||||| | |||||||||||||| ||| ||| |||| |||| ||||| | Sbjct: 841 gtttagtgccatccccatatgagatgggaagaatgcctctcagtgatgctggtgcaccac 900 Query: 1845 agcaagtttctagtggagcattggcatctgcacttgccaactctccgccggagcagcaac 1904 ||| ||| | | |||||||||||| |||||||| ||||| || || || || |||||| Sbjct: 901 cgcaggttccaattggagcattggcctctgcactggccaattcacccccagatcagcaaa 960 Query: 1905 gactgatgcttggtgaaagcttgtatccacttgttgatcagctggagcatgatcaggctg 1964 ||||||||||||||||||| || || || ||||||||||||||||||||||||||||| | Sbjct: 961 gactgatgcttggtgaaagtttatacccgcttgttgatcagctggagcatgatcaggcag 1020 Query: 1965 ccaaggttaccggtatgcttttggagatggaccaaactgaggttcttcatctaatcgagt 2024 | ||||| || || |||||||||||||||||||| ||||| ||||| ||||| || |||| Sbjct: 1021 cgaaggtcactggcatgcttttggagatggaccagactgaagttctccatctcattgagt 1080 Query: 2025 cacctgatgctttgaagtctaaggtcgctgaagctatggaggttctccgcagcgctcagc 2084 ||||||||||| | ||| | ||||||||||| |||||||| |||||||| | ||||||| Sbjct: 1081 cacctgatgctcttaaggccaaggtcgctgaggctatggaagttctccgtaatgctcagc 1140 Query: 2085 agcagcagaccaatgttccagctgatcagctggctgctct 2124 |||||||| | ||| ||| |||||||||| |||||||| Sbjct: 1141 agcagcaggcaaataccccaactgatcagctagctgctct 1180
>dbj|AK104792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-F09, full insert sequence Length = 1180 Score = 795 bits (401), Expect = 0.0 Identities = 820/959 (85%), Gaps = 3/959 (0%) Strand = Plus / Plus Query: 1169 gatgacgatgagaagttaaaagaactttttgccgaatttggcactataacttcttgcaag 1228 |||||||||||||| ||||||||| ||||||| || ||||| ||||| || ||||| ||| Sbjct: 11 gatgacgatgagaaattaaaagaaatttttgctgattttggtactattacctcttgtaag 70 Query: 1229 gttatgcgggattcaaatggggtcaacaaaggatctggttttgttgcatttaaatcttct 1288 || ||| | |||| ||||| || | ||||||||||| |||||||||||||| ||| || Sbjct: 71 gtcatgagagatttgaatggtgttagtaaaggatctggctttgttgcatttaagtctgct 130 Query: 1289 gaagatgctacacgggctcttgtggcaatgaatggtaaaatggttggcagtaagcctctt 1348 ||||||||| |||| ||||||||||| ||||||||||| ||| |||||||||| ||||| Sbjct: 131 gaagatgcttcacgagctcttgtggctatgaatggtaagatgattggcagtaaacctctc 190 Query: 1349 tacgtagcacttgcacaacgaaaggaagaaagaagagccaggctgcaggcgcagttttcg 1408 || ||||||||||||||||| |||||||||||||| || ||||| ||||| ||||| || Sbjct: 191 tatgtagcacttgcacaacgcaaggaagaaagaagggcaaggcttcaggcacagttctca 250 Query: 1409 caaatgcgtcct---gtgatgccacctccagttgctccacgcatgcccatgtacccccct 1465 |||||||||||| |||||||| ||| |||||||||| || ||||||||||| |||||| Sbjct: 251 caaatgcgtcctatggtgatgcctccttcagttgctcctcgtatgcccatgtatccccct 310 Query: 1466 ggtgttcctggtatgggccaacagctattctatggccaaccacctccagcttttgttaac 1525 ||||| |||||| | ||||||||||| || |||||||| ||||||||||||||||||||| Sbjct: 311 ggtgtccctggtgtaggccaacagctgttttatggccagccacctccagcttttgttaac 370 Query: 1526 ccacagcctggatatggtttccagcaacatatgattcctggaatgagacctggtgttgct 1585 || |||||||||| ||| |||||||||||| | |||||||| ||||| ||| |||||| Sbjct: 371 cctcagcctggatttggcttccagcaacatctcattcctggtatgaggcctagtgttgga 430 Query: 1586 ccgatgccaaattttgtcatgccaatggtccagcaaggtcaacaaccacaacgcccatct 1645 || || ||||||||||||||||| ||||||||||||||||||||||||||||| ||| || Sbjct: 431 ccaattccaaattttgtcatgcctatggtccagcaaggtcaacaaccacaacgtccagct 490 Query: 1646 gggaggcgtgcaggtgctggtggaatgcagcagccaatgccaatgggtcaccagcagatg 1705 || ||||||||||| |||||||||| ||||| |||||||||||||| |||||||| ||| Sbjct: 491 ggaaggcgtgcaggcactggtggaattcagcaaccaatgccaatgggccaccagcaaatg 550 Query: 1706 gttccaaggggcggtcgtggtggttaccgttatgcgtcgggccgtggcatgcctgaggct 1765 |||||||||| |||||||||||||||||||||| || || ||||||||||| || | Sbjct: 551 cttccaaggggtagtcgtggtggttaccgttatgcttctggtcgtggcatgccagacaat 610 Query: 1766 gcattccgtggtgttggaggtatggcgccatctctgtatgagatgggaaggatgactcct 1825 ||||||||||||||||||||| | | |||||| | |||||||||||||| ||| ||| Sbjct: 611 gcattccgtggtgttggaggtttagtgccatccccatatgagatgggaagaatgcctctc 670 Query: 1826 ggtgacactggagcaccgcagcaagtttctagtggagcattggcatctgcacttgccaac 1885 |||| |||| ||||| | ||| ||| | | |||||||||||| |||||||| ||||| Sbjct: 671 agtgatgctggtgcaccaccgcaggttccaattggagcattggcctctgcactggccaat 730 Query: 1886 tctccgccggagcagcaacgactgatgcttggtgaaagcttgtatccacttgttgatcag 1945 || || || || |||||| ||||||||||||||||||| || || || |||||||||||| Sbjct: 731 tcacccccagatcagcaaagactgatgcttggtgaaagtttatacccgcttgttgatcag 790 Query: 1946 ctggagcatgatcaggctgccaaggttaccggtatgcttttggagatggaccaaactgag 2005 ||||||||||||||||| || ||||| || || |||||||||||||||||||| ||||| Sbjct: 791 ctggagcatgatcaggcagcgaaggtcactggcatgcttttggagatggaccagactgaa 850 Query: 2006 gttcttcatctaatcgagtcacctgatgctttgaagtctaaggtcgctgaagctatggag 2065 ||||| ||||| || ||||||||||||||| | ||| | ||||||||||| |||||||| Sbjct: 851 gttctccatctcattgagtcacctgatgctcttaaggccaaggtcgctgaggctatggaa 910 Query: 2066 gttctccgcagcgctcagcagcagcagaccaatgttccagctgatcagctggctgctct 2124 |||||||| | ||||||||||||||| | ||| ||| |||||||||| |||||||| Sbjct: 911 gttctccgtaatgctcagcagcagcaggcaaataccccaactgatcagctagctgctct 969
>dbj|AK060952.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-G03, full insert sequence Length = 1208 Score = 795 bits (401), Expect = 0.0 Identities = 820/959 (85%), Gaps = 3/959 (0%) Strand = Plus / Plus Query: 1169 gatgacgatgagaagttaaaagaactttttgccgaatttggcactataacttcttgcaag 1228 |||||||||||||| ||||||||| ||||||| || ||||| ||||| || ||||| ||| Sbjct: 15 gatgacgatgagaaattaaaagaaatttttgctgattttggtactattacctcttgtaag 74 Query: 1229 gttatgcgggattcaaatggggtcaacaaaggatctggttttgttgcatttaaatcttct 1288 || ||| | |||| ||||| || | ||||||||||| |||||||||||||| ||| || Sbjct: 75 gtcatgagagatttgaatggtgttagtaaaggatctggctttgttgcatttaagtctgct 134 Query: 1289 gaagatgctacacgggctcttgtggcaatgaatggtaaaatggttggcagtaagcctctt 1348 ||||||||| |||| ||||||||||| ||||||||||| ||| |||||||||| ||||| Sbjct: 135 gaagatgcttcacgagctcttgtggctatgaatggtaagatgattggcagtaaacctctc 194 Query: 1349 tacgtagcacttgcacaacgaaaggaagaaagaagagccaggctgcaggcgcagttttcg 1408 || ||||||||||||||||| |||||||||||||| || ||||| ||||| ||||| || Sbjct: 195 tatgtagcacttgcacaacgcaaggaagaaagaagggcaaggcttcaggcacagttctca 254 Query: 1409 caaatgcgtcct---gtgatgccacctccagttgctccacgcatgcccatgtacccccct 1465 |||||||||||| |||||||| ||| |||||||||| || ||||||||||| |||||| Sbjct: 255 caaatgcgtcctatggtgatgcctccttcagttgctcctcgtatgcccatgtatccccct 314 Query: 1466 ggtgttcctggtatgggccaacagctattctatggccaaccacctccagcttttgttaac 1525 ||||| |||||| | ||||||||||| || |||||||| ||||||||||||||||||||| Sbjct: 315 ggtgtccctggtgtaggccaacagctgttttatggccagccacctccagcttttgttaac 374 Query: 1526 ccacagcctggatatggtttccagcaacatatgattcctggaatgagacctggtgttgct 1585 || |||||||||| ||| |||||||||||| | |||||||| ||||| ||| |||||| Sbjct: 375 cctcagcctggatttggcttccagcaacatctcattcctggtatgaggcctagtgttgga 434 Query: 1586 ccgatgccaaattttgtcatgccaatggtccagcaaggtcaacaaccacaacgcccatct 1645 || || ||||||||||||||||| ||||||||||||||||||||||||||||| ||| || Sbjct: 435 ccaattccaaattttgtcatgcctatggtccagcaaggtcaacaaccacaacgtccagct 494 Query: 1646 gggaggcgtgcaggtgctggtggaatgcagcagccaatgccaatgggtcaccagcagatg 1705 || ||||||||||| |||||||||| ||||| |||||||||||||| |||||||| ||| Sbjct: 495 ggaaggcgtgcaggcactggtggaattcagcaaccaatgccaatgggccaccagcaaatg 554 Query: 1706 gttccaaggggcggtcgtggtggttaccgttatgcgtcgggccgtggcatgcctgaggct 1765 |||||||||| |||||||||||||||||||||| || || ||||||||||| || | Sbjct: 555 cttccaaggggtagtcgtggtggttaccgttatgcttctggtcgtggcatgccagacaat 614 Query: 1766 gcattccgtggtgttggaggtatggcgccatctctgtatgagatgggaaggatgactcct 1825 ||||||||||||||||||||| | | |||||| | |||||||||||||| ||| ||| Sbjct: 615 gcattccgtggtgttggaggtttagtgccatccccatatgagatgggaagaatgcctctc 674 Query: 1826 ggtgacactggagcaccgcagcaagtttctagtggagcattggcatctgcacttgccaac 1885 |||| |||| ||||| | ||| ||| | | |||||||||||| |||||||| ||||| Sbjct: 675 agtgatgctggtgcaccaccgcaggttccaattggagcattggcctctgcactggccaat 734 Query: 1886 tctccgccggagcagcaacgactgatgcttggtgaaagcttgtatccacttgttgatcag 1945 || || || || |||||| ||||||||||||||||||| || || || |||||||||||| Sbjct: 735 tcacccccagatcagcaaagactgatgcttggtgaaagtttatacccgcttgttgatcag 794 Query: 1946 ctggagcatgatcaggctgccaaggttaccggtatgcttttggagatggaccaaactgag 2005 ||||||||||||||||| || ||||| || || |||||||||||||||||||| ||||| Sbjct: 795 ctggagcatgatcaggcagcgaaggtcactggcatgcttttggagatggaccagactgaa 854 Query: 2006 gttcttcatctaatcgagtcacctgatgctttgaagtctaaggtcgctgaagctatggag 2065 ||||| ||||| || ||||||||||||||| | ||| | ||||||||||| |||||||| Sbjct: 855 gttctccatctcattgagtcacctgatgctcttaaggccaaggtcgctgaggctatggaa 914 Query: 2066 gttctccgcagcgctcagcagcagcagaccaatgttccagctgatcagctggctgctct 2124 |||||||| | ||||||||||||||| | ||| ||| |||||||||| |||||||| Sbjct: 915 gttctccgtaatgctcagcagcagcaggcaaataccccaactgatcagctagctgctct 973
>gb|AY360385.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0095C12, complete sequence Length = 146632 Score = 549 bits (277), Expect = e-152 Identities = 568/665 (85%) Strand = Plus / Plus Query: 567 agaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaa 626 ||||||||||||||||||||||||||||||| || |||||||||||||||| ||||| | Sbjct: 53545 agaatcttgacaagtcaatagataacaaagctctctatgacacattttctgtatttggga 53604 Query: 627 acattctttcatgcaaagttgctacagaaatgtctggagaatccaagggttatggttttg 686 | |||||||| || ||||| || || |||||||||||||| || ||||| |||||||||| Sbjct: 53605 atattctttcgtgtaaagtcgcgacggaaatgtctggagagtcgaagggatatggttttg 53664 Query: 687 ttcagtatgagcaggacgaatcagcacaaaatgctattaatgagctcaatgggatgcttt 746 |||||| ||||| ||| ||| | || || |||||||| | | |||||||||||||||||| Sbjct: 53665 ttcagtttgagctggaagaagctgcccagaatgctatcagtaagctcaatgggatgcttt 53724 Query: 747 tgaatgacaaaaaggtttatgttgggccttttgttcgtaaacaggaaagggaaaatgttt 806 |||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| | Sbjct: 53725 tgaatgacaaaaaggtgtatgtagggccttttgttcgtaaacaggagagggaaaatgtat 53784 Query: 807 ttggcagtcccaagttcaataatgtgtatgtaaagaatctatcagaatctaccactgaag 866 |||| |||||| || || ||||||||||||||||| ||||| ||||| || ||||||| Sbjct: 53785 caggcaatcccaaatttaacaatgtgtatgtaaagaacctatcggaatcaacaactgaag 53844 Query: 867 ataatctgaaagaattgtttggtaattttggacctataactagtgttattgtagtgcgag 926 ||||| | || ||| | |||||||| |||||||| ||||||||||| ||||| |||| | Sbjct: 53845 ataatttaaaggaaatttttggtaaatttggacccataactagtgtcgttgtaatgcgtg 53904 Query: 927 cagatgatggtaaatccagatgctttggatttgtgaactttgaaaatccggatgatgctg 986 || |||||| ||||| ||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 53905 aaggtgatgggaaatctagatgctttggatttgttaactttgaaaatccagatgatgctg 53964 Query: 987 tacatgctgttgaggatttgaatggcaagaaatttgatgataaggaattatatgttggta 1046 | |||||||| ||||||||||||||||| |||||||| ||||||| |||||| ||| Sbjct: 53965 ctcgagctgttgaagatttgaatggcaagaagtttgatgacaaggaatggtatgtttgta 54024 Query: 1047 gagctcagaagaagtctgaaagggagatgcagctgaaagaaagtttcgagaaaagcaata 1106 |||| ||||||||||| || ||||||||| | ||||||||| || ||||| | || | Sbjct: 54025 gagcacagaagaagtcagagagggagatggaattgaaagaaaaatttgagaagaacatca 54084 Query: 1107 aagagacagccgacaggaatcaaggcactaacttgtatttgaaaaacttggatggtagtg 1166 ||||| |||| || | ||| || || |||||||||||||||||||||||||||| ||| Sbjct: 54085 aagaggcagcagataagaaccagggaactaacttgtatttgaaaaacttggatgatagca 54144 Query: 1167 ttgatgacgatgagaagttaaaagaactttttgccgaatttggcactataacttcttgca 1226 | |||||||||||||| ||||||||| ||||||| || ||||| ||||| || ||||| | Sbjct: 54145 tcgatgacgatgagaaattaaaagaaatttttgctgattttggtactattacctcttgta 54204 Query: 1227 aggtt 1231 ||||| Sbjct: 54205 aggtt 54209 Score = 190 bits (96), Expect = 2e-44 Identities = 186/216 (86%) Strand = Plus / Plus Query: 1909 gatgcttggtgaaagcttgtatccacttgttgatcagctggagcatgatcaggctgccaa 1968 ||||||||||||||| || || || ||||||||||||||||||||||||||||| || || Sbjct: 59084 gatgcttggtgaaagtttatacccgcttgttgatcagctggagcatgatcaggcagcgaa 59143 Query: 1969 ggttaccggtatgcttttggagatggaccaaactgaggttcttcatctaatcgagtcacc 2028 ||| || || |||||||||||||||||||| ||||| ||||| ||||| || |||||||| Sbjct: 59144 ggtcactggcatgcttttggagatggaccagactgaagttctccatctcattgagtcacc 59203 Query: 2029 tgatgctttgaagtctaaggtcgctgaagctatggaggttctccgcagcgctcagcagca 2088 ||||||| | ||| | ||||||||||| |||||||| |||||||| | ||||||||||| Sbjct: 59204 tgatgctcttaaggccaaggtcgctgaggctatggaagttctccgtaatgctcagcagca 59263 Query: 2089 gcagaccaatgttccagctgatcagctggctgctct 2124 |||| | ||| ||| |||||||||| |||||||| Sbjct: 59264 gcaggcaaataccccaactgatcagctagctgctct 59299 Score = 182 bits (92), Expect = 4e-42 Identities = 110/116 (94%) Strand = Plus / Plus Query: 449 gctgcaagggcattggaaatgctaaacttcactcctgttaatgggaagcctatcaggata 508 ||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||| Sbjct: 53345 gctgcaagggcattggaaatgctgaacttcactcctattaacgggaagcctatcaggata 53404 Query: 509 atgtattctaaccgtgaccccagctcacgtaaaagtggtgctgcaaatatatttat 564 |||||||||||||||||||||||||||||||||||||| || ||||| |||||||| Sbjct: 53405 atgtattctaaccgtgaccccagctcacgtaaaagtggagcagcaaacatatttat 53460 Score = 182 bits (92), Expect = 4e-42 Identities = 152/172 (88%) Strand = Plus / Plus Query: 1530 agcctggatatggtttccagcaacatatgattcctggaatgagacctggtgttgctccga 1589 ||||||||| ||| |||||||||||| | |||||||| ||||| ||| |||||| || | Sbjct: 58510 agcctggatttggcttccagcaacatctcattcctggtatgaggcctagtgttggaccaa 58569 Query: 1590 tgccaaattttgtcatgccaatggtccagcaaggtcaacaaccacaacgcccatctggga 1649 | ||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||| | Sbjct: 58570 ttccaaattttgtcatgcctatggtccagcaaggtcaacaaccacaacgtccagctggaa 58629 Query: 1650 ggcgtgcaggtgctggtggaatgcagcagccaatgccaatgggtcaccagca 1701 |||||||||| |||||||||| ||||| |||||||||||||| |||||||| Sbjct: 58630 ggcgtgcaggcactggtggaattcagcaaccaatgccaatgggccaccagca 58681 Score = 178 bits (90), Expect = 6e-41 Identities = 147/166 (88%) Strand = Plus / Plus Query: 284 gcgacgtccctgtacgtgggggatctggacgtgagcgtgcaagacgcgcagctctttgac 343 |||||||| |||||||||||||| || |||||||||||||| ||||||||||| || ||| Sbjct: 52436 gcgacgtcgctgtacgtgggggacctcgacgtgagcgtgcaggacgcgcagctgttcgac 52495 Query: 344 gtcttcagccaggtcggctcggtggtgtctgtgcgcgtgtgccgggacgtcaacaccagg 403 ||||||||||||||||| |||||||| || |||||||| |||||||||||||| |||||| Sbjct: 52496 gtcttcagccaggtcggatcggtggtatcggtgcgcgtttgccgggacgtcaataccagg 52555 Query: 404 atgtccctaggctacgcgtacgtcaacttcagcagccctgccgatg 449 |||| || || ||||| || |||||||||||||| || ||||||| Sbjct: 52556 ctgtcgctgggttacgcctatgtcaacttcagcagtcccgccgatg 52601 Score = 133 bits (67), Expect = 3e-27 Identities = 120/137 (87%), Gaps = 3/137 (2%) Strand = Plus / Plus Query: 1394 caggcgcagttttcgcaaatgcgtcct---gtgatgccacctccagttgctccacgcatg 1450 ||||| ||||| || |||||||||||| |||||||| ||| |||||||||| || ||| Sbjct: 54865 caggcacagttctcacaaatgcgtcctatggtgatgcctccttcagttgctcctcgtatg 54924 Query: 1451 cccatgtacccccctggtgttcctggtatgggccaacagctattctatggccaaccacct 1510 |||||||| ||||||||||| |||||| | ||||||||||| || |||||||| |||||| Sbjct: 54925 cccatgtatccccctggtgtccctggtgtaggccaacagctgttttatggccagccacct 54984 Query: 1511 ccagcttttgttaaccc 1527 ||||||||||||||||| Sbjct: 54985 ccagcttttgttaaccc 55001 Score = 117 bits (59), Expect = 2e-22 Identities = 173/211 (81%) Strand = Plus / Plus Query: 1699 gcagatggttccaaggggcggtcgtggtggttaccgttatgcgtcgggccgtggcatgcc 1758 ||||||| |||||||||| |||||||||||||||||||||| || || ||||||||||| Sbjct: 58780 gcagatgcttccaaggggtagtcgtggtggttaccgttatgcttctggtcgtggcatgcc 58839 Query: 1759 tgaggctgcattccgtggtgttggaggtatggcgccatctctgtatgagatgggaaggat 1818 || |||||||||||||||||||||| | | |||||| | |||||||||||||| || Sbjct: 58840 agacaatgcattccgtggtgttggaggtttagtgccatccccatatgagatgggaagaat 58899 Query: 1819 gactcctggtgacactggagcaccgcagcaagtttctagtggagcattggcatctgcact 1878 | ||| |||| |||| ||||| | ||| ||| | | |||||||||||| |||||||| Sbjct: 58900 gcctctcagtgatgctggtgcaccaccgcaggttccaattggagcattggcctctgcact 58959 Query: 1879 tgccaactctccgccggagcagcaacgactg 1909 ||||| || || || || |||||| ||||| Sbjct: 58960 ggccaattcacccccagatcagcaaagactg 58990 Score = 101 bits (51), Expect = 1e-17 Identities = 81/91 (89%) Strand = Plus / Plus Query: 1307 cttgtggcaatgaatggtaaaatggttggcagtaagcctctttacgtagcacttgcacaa 1366 |||||||| ||||||||||| ||| |||||||||| ||||| || ||||||||||||||| Sbjct: 54476 cttgtggctatgaatggtaagatgattggcagtaaacctctctatgtagcacttgcacaa 54535 Query: 1367 cgaaaggaagaaagaagagccaggctgcagg 1397 || |||||||||||||| || ||||| |||| Sbjct: 54536 cgcaaggaagaaagaagggcaaggcttcagg 54566 Score = 61.9 bits (31), Expect = 1e-05 Identities = 43/47 (91%) Strand = Plus / Plus Query: 1256 aaaggatctggttttgttgcatttaaatcttctgaagatgctacacg 1302 ||||||||||| |||||||||||||| ||| ||||||||||| |||| Sbjct: 54340 aaaggatctggctttgttgcatttaagtctgctgaagatgcttcacg 54386 Score = 46.1 bits (23), Expect = 0.57 Identities = 23/23 (100%) Strand = Plus / Plus Query: 165 tgatggcggcgcaggttcaggcg 187 ||||||||||||||||||||||| Sbjct: 52323 tgatggcggcgcaggttcaggcg 52345
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 549 bits (277), Expect = e-152 Identities = 568/665 (85%) Strand = Plus / Plus Query: 567 agaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaa 626 ||||||||||||||||||||||||||||||| || |||||||||||||||| ||||| | Sbjct: 13465918 agaatcttgacaagtcaatagataacaaagctctctatgacacattttctgtatttggga 13465977 Query: 627 acattctttcatgcaaagttgctacagaaatgtctggagaatccaagggttatggttttg 686 | |||||||| || ||||| || || |||||||||||||| || ||||| |||||||||| Sbjct: 13465978 atattctttcgtgtaaagtcgcgacggaaatgtctggagagtcgaagggatatggttttg 13466037 Query: 687 ttcagtatgagcaggacgaatcagcacaaaatgctattaatgagctcaatgggatgcttt 746 |||||| ||||| ||| ||| | || || |||||||| | | |||||||||||||||||| Sbjct: 13466038 ttcagtttgagctggaagaagctgcccagaatgctatcagtaagctcaatgggatgcttt 13466097 Query: 747 tgaatgacaaaaaggtttatgttgggccttttgttcgtaaacaggaaagggaaaatgttt 806 |||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| | Sbjct: 13466098 tgaatgacaaaaaggtgtatgtagggccttttgttcgtaaacaggagagggaaaatgtat 13466157 Query: 807 ttggcagtcccaagttcaataatgtgtatgtaaagaatctatcagaatctaccactgaag 866 |||| |||||| || || ||||||||||||||||| ||||| ||||| || ||||||| Sbjct: 13466158 caggcaatcccaaatttaacaatgtgtatgtaaagaacctatcggaatcaacaactgaag 13466217 Query: 867 ataatctgaaagaattgtttggtaattttggacctataactagtgttattgtagtgcgag 926 ||||| | || ||| | |||||||| |||||||| ||||||||||| ||||| |||| | Sbjct: 13466218 ataatttaaaggaaatttttggtaaatttggacccataactagtgtcgttgtaatgcgtg 13466277 Query: 927 cagatgatggtaaatccagatgctttggatttgtgaactttgaaaatccggatgatgctg 986 || |||||| ||||| ||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 13466278 aaggtgatgggaaatctagatgctttggatttgttaactttgaaaatccagatgatgctg 13466337 Query: 987 tacatgctgttgaggatttgaatggcaagaaatttgatgataaggaattatatgttggta 1046 | |||||||| ||||||||||||||||| |||||||| ||||||| |||||| ||| Sbjct: 13466338 ctcgagctgttgaagatttgaatggcaagaagtttgatgacaaggaatggtatgtttgta 13466397 Query: 1047 gagctcagaagaagtctgaaagggagatgcagctgaaagaaagtttcgagaaaagcaata 1106 |||| ||||||||||| || ||||||||| | ||||||||| || ||||| | || | Sbjct: 13466398 gagcacagaagaagtcagagagggagatggaattgaaagaaaaatttgagaagaacatca 13466457 Query: 1107 aagagacagccgacaggaatcaaggcactaacttgtatttgaaaaacttggatggtagtg 1166 ||||| |||| || | ||| || || |||||||||||||||||||||||||||| ||| Sbjct: 13466458 aagaggcagcagataagaaccagggaactaacttgtatttgaaaaacttggatgatagca 13466517 Query: 1167 ttgatgacgatgagaagttaaaagaactttttgccgaatttggcactataacttcttgca 1226 | |||||||||||||| ||||||||| ||||||| || ||||| ||||| || ||||| | Sbjct: 13466518 tcgatgacgatgagaaattaaaagaaatttttgctgattttggtactattacctcttgta 13466577 Query: 1227 aggtt 1231 ||||| Sbjct: 13466578 aggtt 13466582 Score = 190 bits (96), Expect = 2e-44 Identities = 186/216 (86%) Strand = Plus / Plus Query: 1909 gatgcttggtgaaagcttgtatccacttgttgatcagctggagcatgatcaggctgccaa 1968 ||||||||||||||| || || || ||||||||||||||||||||||||||||| || || Sbjct: 13471457 gatgcttggtgaaagtttatacccgcttgttgatcagctggagcatgatcaggcagcgaa 13471516 Query: 1969 ggttaccggtatgcttttggagatggaccaaactgaggttcttcatctaatcgagtcacc 2028 ||| || || |||||||||||||||||||| ||||| ||||| ||||| || |||||||| Sbjct: 13471517 ggtcactggcatgcttttggagatggaccagactgaagttctccatctcattgagtcacc 13471576 Query: 2029 tgatgctttgaagtctaaggtcgctgaagctatggaggttctccgcagcgctcagcagca 2088 ||||||| | ||| | ||||||||||| |||||||| |||||||| | ||||||||||| Sbjct: 13471577 tgatgctcttaaggccaaggtcgctgaggctatggaagttctccgtaatgctcagcagca 13471636 Query: 2089 gcagaccaatgttccagctgatcagctggctgctct 2124 |||| | ||| ||| |||||||||| |||||||| Sbjct: 13471637 gcaggcaaataccccaactgatcagctagctgctct 13471672 Score = 182 bits (92), Expect = 4e-42 Identities = 110/116 (94%) Strand = Plus / Plus Query: 449 gctgcaagggcattggaaatgctaaacttcactcctgttaatgggaagcctatcaggata 508 ||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||| Sbjct: 13465718 gctgcaagggcattggaaatgctgaacttcactcctattaacgggaagcctatcaggata 13465777 Query: 509 atgtattctaaccgtgaccccagctcacgtaaaagtggtgctgcaaatatatttat 564 |||||||||||||||||||||||||||||||||||||| || ||||| |||||||| Sbjct: 13465778 atgtattctaaccgtgaccccagctcacgtaaaagtggagcagcaaacatatttat 13465833 Score = 182 bits (92), Expect = 4e-42 Identities = 152/172 (88%) Strand = Plus / Plus Query: 1530 agcctggatatggtttccagcaacatatgattcctggaatgagacctggtgttgctccga 1589 ||||||||| ||| |||||||||||| | |||||||| ||||| ||| |||||| || | Sbjct: 13470883 agcctggatttggcttccagcaacatctcattcctggtatgaggcctagtgttggaccaa 13470942 Query: 1590 tgccaaattttgtcatgccaatggtccagcaaggtcaacaaccacaacgcccatctggga 1649 | ||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||| | Sbjct: 13470943 ttccaaattttgtcatgcctatggtccagcaaggtcaacaaccacaacgtccagctggaa 13471002 Query: 1650 ggcgtgcaggtgctggtggaatgcagcagccaatgccaatgggtcaccagca 1701 |||||||||| |||||||||| ||||| |||||||||||||| |||||||| Sbjct: 13471003 ggcgtgcaggcactggtggaattcagcaaccaatgccaatgggccaccagca 13471054 Score = 178 bits (90), Expect = 6e-41 Identities = 147/166 (88%) Strand = Plus / Plus Query: 284 gcgacgtccctgtacgtgggggatctggacgtgagcgtgcaagacgcgcagctctttgac 343 |||||||| |||||||||||||| || |||||||||||||| ||||||||||| || ||| Sbjct: 13464809 gcgacgtcgctgtacgtgggggacctcgacgtgagcgtgcaggacgcgcagctgttcgac 13464868 Query: 344 gtcttcagccaggtcggctcggtggtgtctgtgcgcgtgtgccgggacgtcaacaccagg 403 ||||||||||||||||| |||||||| || |||||||| |||||||||||||| |||||| Sbjct: 13464869 gtcttcagccaggtcggatcggtggtatcggtgcgcgtttgccgggacgtcaataccagg 13464928 Query: 404 atgtccctaggctacgcgtacgtcaacttcagcagccctgccgatg 449 |||| || || ||||| || |||||||||||||| || ||||||| Sbjct: 13464929 ctgtcgctgggttacgcctatgtcaacttcagcagtcccgccgatg 13464974 Score = 133 bits (67), Expect = 3e-27 Identities = 120/137 (87%), Gaps = 3/137 (2%) Strand = Plus / Plus Query: 1394 caggcgcagttttcgcaaatgcgtcct---gtgatgccacctccagttgctccacgcatg 1450 ||||| ||||| || |||||||||||| |||||||| ||| |||||||||| || ||| Sbjct: 13467238 caggcacagttctcacaaatgcgtcctatggtgatgcctccttcagttgctcctcgtatg 13467297 Query: 1451 cccatgtacccccctggtgttcctggtatgggccaacagctattctatggccaaccacct 1510 |||||||| ||||||||||| |||||| | ||||||||||| || |||||||| |||||| Sbjct: 13467298 cccatgtatccccctggtgtccctggtgtaggccaacagctgttttatggccagccacct 13467357 Query: 1511 ccagcttttgttaaccc 1527 ||||||||||||||||| Sbjct: 13467358 ccagcttttgttaaccc 13467374 Score = 117 bits (59), Expect = 2e-22 Identities = 173/211 (81%) Strand = Plus / Plus Query: 1699 gcagatggttccaaggggcggtcgtggtggttaccgttatgcgtcgggccgtggcatgcc 1758 ||||||| |||||||||| |||||||||||||||||||||| || || ||||||||||| Sbjct: 13471153 gcagatgcttccaaggggtagtcgtggtggttaccgttatgcttctggtcgtggcatgcc 13471212 Query: 1759 tgaggctgcattccgtggtgttggaggtatggcgccatctctgtatgagatgggaaggat 1818 || |||||||||||||||||||||| | | |||||| | |||||||||||||| || Sbjct: 13471213 agacaatgcattccgtggtgttggaggtttagtgccatccccatatgagatgggaagaat 13471272 Query: 1819 gactcctggtgacactggagcaccgcagcaagtttctagtggagcattggcatctgcact 1878 | ||| |||| |||| ||||| | ||| ||| | | |||||||||||| |||||||| Sbjct: 13471273 gcctctcagtgatgctggtgcaccaccgcaggttccaattggagcattggcctctgcact 13471332 Query: 1879 tgccaactctccgccggagcagcaacgactg 1909 ||||| || || || || |||||| ||||| Sbjct: 13471333 ggccaattcacccccagatcagcaaagactg 13471363 Score = 101 bits (51), Expect = 1e-17 Identities = 81/91 (89%) Strand = Plus / Plus Query: 1307 cttgtggcaatgaatggtaaaatggttggcagtaagcctctttacgtagcacttgcacaa 1366 |||||||| ||||||||||| ||| |||||||||| ||||| || ||||||||||||||| Sbjct: 13466849 cttgtggctatgaatggtaagatgattggcagtaaacctctctatgtagcacttgcacaa 13466908 Query: 1367 cgaaaggaagaaagaagagccaggctgcagg 1397 || |||||||||||||| || ||||| |||| Sbjct: 13466909 cgcaaggaagaaagaagggcaaggcttcagg 13466939 Score = 61.9 bits (31), Expect = 1e-05 Identities = 43/47 (91%) Strand = Plus / Plus Query: 1256 aaaggatctggttttgttgcatttaaatcttctgaagatgctacacg 1302 ||||||||||| |||||||||||||| ||| ||||||||||| |||| Sbjct: 13466713 aaaggatctggctttgttgcatttaagtctgctgaagatgcttcacg 13466759 Score = 46.1 bits (23), Expect = 0.57 Identities = 23/23 (100%) Strand = Plus / Plus Query: 165 tgatggcggcgcaggttcaggcg 187 ||||||||||||||||||||||| Sbjct: 13464696 tgatggcggcgcaggttcaggcg 13464718
>dbj|AP005500.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0451H06 Length = 136473 Score = 549 bits (277), Expect = e-152 Identities = 568/665 (85%) Strand = Plus / Plus Query: 567 agaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaa 626 ||||||||||||||||||||||||||||||| || |||||||||||||||| ||||| | Sbjct: 4232 agaatcttgacaagtcaatagataacaaagctctctatgacacattttctgtatttggga 4291 Query: 627 acattctttcatgcaaagttgctacagaaatgtctggagaatccaagggttatggttttg 686 | |||||||| || ||||| || || |||||||||||||| || ||||| |||||||||| Sbjct: 4292 atattctttcgtgtaaagtcgcgacggaaatgtctggagagtcgaagggatatggttttg 4351 Query: 687 ttcagtatgagcaggacgaatcagcacaaaatgctattaatgagctcaatgggatgcttt 746 |||||| ||||| ||| ||| | || || |||||||| | | |||||||||||||||||| Sbjct: 4352 ttcagtttgagctggaagaagctgcccagaatgctatcagtaagctcaatgggatgcttt 4411 Query: 747 tgaatgacaaaaaggtttatgttgggccttttgttcgtaaacaggaaagggaaaatgttt 806 |||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| | Sbjct: 4412 tgaatgacaaaaaggtgtatgtagggccttttgttcgtaaacaggagagggaaaatgtat 4471 Query: 807 ttggcagtcccaagttcaataatgtgtatgtaaagaatctatcagaatctaccactgaag 866 |||| |||||| || || ||||||||||||||||| ||||| ||||| || ||||||| Sbjct: 4472 caggcaatcccaaatttaacaatgtgtatgtaaagaacctatcggaatcaacaactgaag 4531 Query: 867 ataatctgaaagaattgtttggtaattttggacctataactagtgttattgtagtgcgag 926 ||||| | || ||| | |||||||| |||||||| ||||||||||| ||||| |||| | Sbjct: 4532 ataatttaaaggaaatttttggtaaatttggacccataactagtgtcgttgtaatgcgtg 4591 Query: 927 cagatgatggtaaatccagatgctttggatttgtgaactttgaaaatccggatgatgctg 986 || |||||| ||||| ||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 4592 aaggtgatgggaaatctagatgctttggatttgttaactttgaaaatccagatgatgctg 4651 Query: 987 tacatgctgttgaggatttgaatggcaagaaatttgatgataaggaattatatgttggta 1046 | |||||||| ||||||||||||||||| |||||||| ||||||| |||||| ||| Sbjct: 4652 ctcgagctgttgaagatttgaatggcaagaagtttgatgacaaggaatggtatgtttgta 4711 Query: 1047 gagctcagaagaagtctgaaagggagatgcagctgaaagaaagtttcgagaaaagcaata 1106 |||| ||||||||||| || ||||||||| | ||||||||| || ||||| | || | Sbjct: 4712 gagcacagaagaagtcagagagggagatggaattgaaagaaaaatttgagaagaacatca 4771 Query: 1107 aagagacagccgacaggaatcaaggcactaacttgtatttgaaaaacttggatggtagtg 1166 ||||| |||| || | ||| || || |||||||||||||||||||||||||||| ||| Sbjct: 4772 aagaggcagcagataagaaccagggaactaacttgtatttgaaaaacttggatgatagca 4831 Query: 1167 ttgatgacgatgagaagttaaaagaactttttgccgaatttggcactataacttcttgca 1226 | |||||||||||||| ||||||||| ||||||| || ||||| ||||| || ||||| | Sbjct: 4832 tcgatgacgatgagaaattaaaagaaatttttgctgattttggtactattacctcttgta 4891 Query: 1227 aggtt 1231 ||||| Sbjct: 4892 aggtt 4896 Score = 190 bits (96), Expect = 2e-44 Identities = 186/216 (86%) Strand = Plus / Plus Query: 1909 gatgcttggtgaaagcttgtatccacttgttgatcagctggagcatgatcaggctgccaa 1968 ||||||||||||||| || || || ||||||||||||||||||||||||||||| || || Sbjct: 9771 gatgcttggtgaaagtttatacccgcttgttgatcagctggagcatgatcaggcagcgaa 9830 Query: 1969 ggttaccggtatgcttttggagatggaccaaactgaggttcttcatctaatcgagtcacc 2028 ||| || || |||||||||||||||||||| ||||| ||||| ||||| || |||||||| Sbjct: 9831 ggtcactggcatgcttttggagatggaccagactgaagttctccatctcattgagtcacc 9890 Query: 2029 tgatgctttgaagtctaaggtcgctgaagctatggaggttctccgcagcgctcagcagca 2088 ||||||| | ||| | ||||||||||| |||||||| |||||||| | ||||||||||| Sbjct: 9891 tgatgctcttaaggccaaggtcgctgaggctatggaagttctccgtaatgctcagcagca 9950 Query: 2089 gcagaccaatgttccagctgatcagctggctgctct 2124 |||| | ||| ||| |||||||||| |||||||| Sbjct: 9951 gcaggcaaataccccaactgatcagctagctgctct 9986 Score = 182 bits (92), Expect = 4e-42 Identities = 110/116 (94%) Strand = Plus / Plus Query: 449 gctgcaagggcattggaaatgctaaacttcactcctgttaatgggaagcctatcaggata 508 ||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||| Sbjct: 4032 gctgcaagggcattggaaatgctgaacttcactcctattaacgggaagcctatcaggata 4091 Query: 509 atgtattctaaccgtgaccccagctcacgtaaaagtggtgctgcaaatatatttat 564 |||||||||||||||||||||||||||||||||||||| || ||||| |||||||| Sbjct: 4092 atgtattctaaccgtgaccccagctcacgtaaaagtggagcagcaaacatatttat 4147 Score = 182 bits (92), Expect = 4e-42 Identities = 152/172 (88%) Strand = Plus / Plus Query: 1530 agcctggatatggtttccagcaacatatgattcctggaatgagacctggtgttgctccga 1589 ||||||||| ||| |||||||||||| | |||||||| ||||| ||| |||||| || | Sbjct: 9197 agcctggatttggcttccagcaacatctcattcctggtatgaggcctagtgttggaccaa 9256 Query: 1590 tgccaaattttgtcatgccaatggtccagcaaggtcaacaaccacaacgcccatctggga 1649 | ||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||| | Sbjct: 9257 ttccaaattttgtcatgcctatggtccagcaaggtcaacaaccacaacgtccagctggaa 9316 Query: 1650 ggcgtgcaggtgctggtggaatgcagcagccaatgccaatgggtcaccagca 1701 |||||||||| |||||||||| ||||| |||||||||||||| |||||||| Sbjct: 9317 ggcgtgcaggcactggtggaattcagcaaccaatgccaatgggccaccagca 9368 Score = 178 bits (90), Expect = 6e-41 Identities = 147/166 (88%) Strand = Plus / Plus Query: 284 gcgacgtccctgtacgtgggggatctggacgtgagcgtgcaagacgcgcagctctttgac 343 |||||||| |||||||||||||| || |||||||||||||| ||||||||||| || ||| Sbjct: 3123 gcgacgtcgctgtacgtgggggacctcgacgtgagcgtgcaggacgcgcagctgttcgac 3182 Query: 344 gtcttcagccaggtcggctcggtggtgtctgtgcgcgtgtgccgggacgtcaacaccagg 403 ||||||||||||||||| |||||||| || |||||||| |||||||||||||| |||||| Sbjct: 3183 gtcttcagccaggtcggatcggtggtatcggtgcgcgtttgccgggacgtcaataccagg 3242 Query: 404 atgtccctaggctacgcgtacgtcaacttcagcagccctgccgatg 449 |||| || || ||||| || |||||||||||||| || ||||||| Sbjct: 3243 ctgtcgctgggttacgcctatgtcaacttcagcagtcccgccgatg 3288 Score = 133 bits (67), Expect = 3e-27 Identities = 120/137 (87%), Gaps = 3/137 (2%) Strand = Plus / Plus Query: 1394 caggcgcagttttcgcaaatgcgtcct---gtgatgccacctccagttgctccacgcatg 1450 ||||| ||||| || |||||||||||| |||||||| ||| |||||||||| || ||| Sbjct: 5552 caggcacagttctcacaaatgcgtcctatggtgatgcctccttcagttgctcctcgtatg 5611 Query: 1451 cccatgtacccccctggtgttcctggtatgggccaacagctattctatggccaaccacct 1510 |||||||| ||||||||||| |||||| | ||||||||||| || |||||||| |||||| Sbjct: 5612 cccatgtatccccctggtgtccctggtgtaggccaacagctgttttatggccagccacct 5671 Query: 1511 ccagcttttgttaaccc 1527 ||||||||||||||||| Sbjct: 5672 ccagcttttgttaaccc 5688 Score = 117 bits (59), Expect = 2e-22 Identities = 173/211 (81%) Strand = Plus / Plus Query: 1699 gcagatggttccaaggggcggtcgtggtggttaccgttatgcgtcgggccgtggcatgcc 1758 ||||||| |||||||||| |||||||||||||||||||||| || || ||||||||||| Sbjct: 9467 gcagatgcttccaaggggtagtcgtggtggttaccgttatgcttctggtcgtggcatgcc 9526 Query: 1759 tgaggctgcattccgtggtgttggaggtatggcgccatctctgtatgagatgggaaggat 1818 || |||||||||||||||||||||| | | |||||| | |||||||||||||| || Sbjct: 9527 agacaatgcattccgtggtgttggaggtttagtgccatccccatatgagatgggaagaat 9586 Query: 1819 gactcctggtgacactggagcaccgcagcaagtttctagtggagcattggcatctgcact 1878 | ||| |||| |||| ||||| | ||| ||| | | |||||||||||| |||||||| Sbjct: 9587 gcctctcagtgatgctggtgcaccaccgcaggttccaattggagcattggcctctgcact 9646 Query: 1879 tgccaactctccgccggagcagcaacgactg 1909 ||||| || || || || |||||| ||||| Sbjct: 9647 ggccaattcacccccagatcagcaaagactg 9677 Score = 101 bits (51), Expect = 1e-17 Identities = 81/91 (89%) Strand = Plus / Plus Query: 1307 cttgtggcaatgaatggtaaaatggttggcagtaagcctctttacgtagcacttgcacaa 1366 |||||||| ||||||||||| ||| |||||||||| ||||| || ||||||||||||||| Sbjct: 5163 cttgtggctatgaatggtaagatgattggcagtaaacctctctatgtagcacttgcacaa 5222 Query: 1367 cgaaaggaagaaagaagagccaggctgcagg 1397 || |||||||||||||| || ||||| |||| Sbjct: 5223 cgcaaggaagaaagaagggcaaggcttcagg 5253 Score = 61.9 bits (31), Expect = 1e-05 Identities = 43/47 (91%) Strand = Plus / Plus Query: 1256 aaaggatctggttttgttgcatttaaatcttctgaagatgctacacg 1302 ||||||||||| |||||||||||||| ||| ||||||||||| |||| Sbjct: 5027 aaaggatctggctttgttgcatttaagtctgctgaagatgcttcacg 5073 Score = 46.1 bits (23), Expect = 0.57 Identities = 23/23 (100%) Strand = Plus / Plus Query: 165 tgatggcggcgcaggttcaggcg 187 ||||||||||||||||||||||| Sbjct: 3010 tgatggcggcgcaggttcaggcg 3032
>dbj|AP004228.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1120_B07 Length = 118763 Score = 549 bits (277), Expect = e-152 Identities = 568/665 (85%) Strand = Plus / Plus Query: 567 agaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaa 626 ||||||||||||||||||||||||||||||| || |||||||||||||||| ||||| | Sbjct: 102645 agaatcttgacaagtcaatagataacaaagctctctatgacacattttctgtatttggga 102704 Query: 627 acattctttcatgcaaagttgctacagaaatgtctggagaatccaagggttatggttttg 686 | |||||||| || ||||| || || |||||||||||||| || ||||| |||||||||| Sbjct: 102705 atattctttcgtgtaaagtcgcgacggaaatgtctggagagtcgaagggatatggttttg 102764 Query: 687 ttcagtatgagcaggacgaatcagcacaaaatgctattaatgagctcaatgggatgcttt 746 |||||| ||||| ||| ||| | || || |||||||| | | |||||||||||||||||| Sbjct: 102765 ttcagtttgagctggaagaagctgcccagaatgctatcagtaagctcaatgggatgcttt 102824 Query: 747 tgaatgacaaaaaggtttatgttgggccttttgttcgtaaacaggaaagggaaaatgttt 806 |||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| | Sbjct: 102825 tgaatgacaaaaaggtgtatgtagggccttttgttcgtaaacaggagagggaaaatgtat 102884 Query: 807 ttggcagtcccaagttcaataatgtgtatgtaaagaatctatcagaatctaccactgaag 866 |||| |||||| || || ||||||||||||||||| ||||| ||||| || ||||||| Sbjct: 102885 caggcaatcccaaatttaacaatgtgtatgtaaagaacctatcggaatcaacaactgaag 102944 Query: 867 ataatctgaaagaattgtttggtaattttggacctataactagtgttattgtagtgcgag 926 ||||| | || ||| | |||||||| |||||||| ||||||||||| ||||| |||| | Sbjct: 102945 ataatttaaaggaaatttttggtaaatttggacccataactagtgtcgttgtaatgcgtg 103004 Query: 927 cagatgatggtaaatccagatgctttggatttgtgaactttgaaaatccggatgatgctg 986 || |||||| ||||| ||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 103005 aaggtgatgggaaatctagatgctttggatttgttaactttgaaaatccagatgatgctg 103064 Query: 987 tacatgctgttgaggatttgaatggcaagaaatttgatgataaggaattatatgttggta 1046 | |||||||| ||||||||||||||||| |||||||| ||||||| |||||| ||| Sbjct: 103065 ctcgagctgttgaagatttgaatggcaagaagtttgatgacaaggaatggtatgtttgta 103124 Query: 1047 gagctcagaagaagtctgaaagggagatgcagctgaaagaaagtttcgagaaaagcaata 1106 |||| ||||||||||| || ||||||||| | ||||||||| || ||||| | || | Sbjct: 103125 gagcacagaagaagtcagagagggagatggaattgaaagaaaaatttgagaagaacatca 103184 Query: 1107 aagagacagccgacaggaatcaaggcactaacttgtatttgaaaaacttggatggtagtg 1166 ||||| |||| || | ||| || || |||||||||||||||||||||||||||| ||| Sbjct: 103185 aagaggcagcagataagaaccagggaactaacttgtatttgaaaaacttggatgatagca 103244 Query: 1167 ttgatgacgatgagaagttaaaagaactttttgccgaatttggcactataacttcttgca 1226 | |||||||||||||| ||||||||| ||||||| || ||||| ||||| || ||||| | Sbjct: 103245 tcgatgacgatgagaaattaaaagaaatttttgctgattttggtactattacctcttgta 103304 Query: 1227 aggtt 1231 ||||| Sbjct: 103305 aggtt 103309 Score = 190 bits (96), Expect = 2e-44 Identities = 186/216 (86%) Strand = Plus / Plus Query: 1909 gatgcttggtgaaagcttgtatccacttgttgatcagctggagcatgatcaggctgccaa 1968 ||||||||||||||| || || || ||||||||||||||||||||||||||||| || || Sbjct: 108184 gatgcttggtgaaagtttatacccgcttgttgatcagctggagcatgatcaggcagcgaa 108243 Query: 1969 ggttaccggtatgcttttggagatggaccaaactgaggttcttcatctaatcgagtcacc 2028 ||| || || |||||||||||||||||||| ||||| ||||| ||||| || |||||||| Sbjct: 108244 ggtcactggcatgcttttggagatggaccagactgaagttctccatctcattgagtcacc 108303 Query: 2029 tgatgctttgaagtctaaggtcgctgaagctatggaggttctccgcagcgctcagcagca 2088 ||||||| | ||| | ||||||||||| |||||||| |||||||| | ||||||||||| Sbjct: 108304 tgatgctcttaaggccaaggtcgctgaggctatggaagttctccgtaatgctcagcagca 108363 Query: 2089 gcagaccaatgttccagctgatcagctggctgctct 2124 |||| | ||| ||| |||||||||| |||||||| Sbjct: 108364 gcaggcaaataccccaactgatcagctagctgctct 108399 Score = 182 bits (92), Expect = 4e-42 Identities = 110/116 (94%) Strand = Plus / Plus Query: 449 gctgcaagggcattggaaatgctaaacttcactcctgttaatgggaagcctatcaggata 508 ||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||| Sbjct: 102445 gctgcaagggcattggaaatgctgaacttcactcctattaacgggaagcctatcaggata 102504 Query: 509 atgtattctaaccgtgaccccagctcacgtaaaagtggtgctgcaaatatatttat 564 |||||||||||||||||||||||||||||||||||||| || ||||| |||||||| Sbjct: 102505 atgtattctaaccgtgaccccagctcacgtaaaagtggagcagcaaacatatttat 102560 Score = 182 bits (92), Expect = 4e-42 Identities = 152/172 (88%) Strand = Plus / Plus Query: 1530 agcctggatatggtttccagcaacatatgattcctggaatgagacctggtgttgctccga 1589 ||||||||| ||| |||||||||||| | |||||||| ||||| ||| |||||| || | Sbjct: 107610 agcctggatttggcttccagcaacatctcattcctggtatgaggcctagtgttggaccaa 107669 Query: 1590 tgccaaattttgtcatgccaatggtccagcaaggtcaacaaccacaacgcccatctggga 1649 | ||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||| | Sbjct: 107670 ttccaaattttgtcatgcctatggtccagcaaggtcaacaaccacaacgtccagctggaa 107729 Query: 1650 ggcgtgcaggtgctggtggaatgcagcagccaatgccaatgggtcaccagca 1701 |||||||||| |||||||||| ||||| |||||||||||||| |||||||| Sbjct: 107730 ggcgtgcaggcactggtggaattcagcaaccaatgccaatgggccaccagca 107781 Score = 178 bits (90), Expect = 6e-41 Identities = 147/166 (88%) Strand = Plus / Plus Query: 284 gcgacgtccctgtacgtgggggatctggacgtgagcgtgcaagacgcgcagctctttgac 343 |||||||| |||||||||||||| || |||||||||||||| ||||||||||| || ||| Sbjct: 101536 gcgacgtcgctgtacgtgggggacctcgacgtgagcgtgcaggacgcgcagctgttcgac 101595 Query: 344 gtcttcagccaggtcggctcggtggtgtctgtgcgcgtgtgccgggacgtcaacaccagg 403 ||||||||||||||||| |||||||| || |||||||| |||||||||||||| |||||| Sbjct: 101596 gtcttcagccaggtcggatcggtggtatcggtgcgcgtttgccgggacgtcaataccagg 101655 Query: 404 atgtccctaggctacgcgtacgtcaacttcagcagccctgccgatg 449 |||| || || ||||| || |||||||||||||| || ||||||| Sbjct: 101656 ctgtcgctgggttacgcctatgtcaacttcagcagtcccgccgatg 101701 Score = 133 bits (67), Expect = 3e-27 Identities = 120/137 (87%), Gaps = 3/137 (2%) Strand = Plus / Plus Query: 1394 caggcgcagttttcgcaaatgcgtcct---gtgatgccacctccagttgctccacgcatg 1450 ||||| ||||| || |||||||||||| |||||||| ||| |||||||||| || ||| Sbjct: 103965 caggcacagttctcacaaatgcgtcctatggtgatgcctccttcagttgctcctcgtatg 104024 Query: 1451 cccatgtacccccctggtgttcctggtatgggccaacagctattctatggccaaccacct 1510 |||||||| ||||||||||| |||||| | ||||||||||| || |||||||| |||||| Sbjct: 104025 cccatgtatccccctggtgtccctggtgtaggccaacagctgttttatggccagccacct 104084 Query: 1511 ccagcttttgttaaccc 1527 ||||||||||||||||| Sbjct: 104085 ccagcttttgttaaccc 104101 Score = 117 bits (59), Expect = 2e-22 Identities = 173/211 (81%) Strand = Plus / Plus Query: 1699 gcagatggttccaaggggcggtcgtggtggttaccgttatgcgtcgggccgtggcatgcc 1758 ||||||| |||||||||| |||||||||||||||||||||| || || ||||||||||| Sbjct: 107880 gcagatgcttccaaggggtagtcgtggtggttaccgttatgcttctggtcgtggcatgcc 107939 Query: 1759 tgaggctgcattccgtggtgttggaggtatggcgccatctctgtatgagatgggaaggat 1818 || |||||||||||||||||||||| | | |||||| | |||||||||||||| || Sbjct: 107940 agacaatgcattccgtggtgttggaggtttagtgccatccccatatgagatgggaagaat 107999 Query: 1819 gactcctggtgacactggagcaccgcagcaagtttctagtggagcattggcatctgcact 1878 | ||| |||| |||| ||||| | ||| ||| | | |||||||||||| |||||||| Sbjct: 108000 gcctctcagtgatgctggtgcaccaccgcaggttccaattggagcattggcctctgcact 108059 Query: 1879 tgccaactctccgccggagcagcaacgactg 1909 ||||| || || || || |||||| ||||| Sbjct: 108060 ggccaattcacccccagatcagcaaagactg 108090 Score = 101 bits (51), Expect = 1e-17 Identities = 81/91 (89%) Strand = Plus / Plus Query: 1307 cttgtggcaatgaatggtaaaatggttggcagtaagcctctttacgtagcacttgcacaa 1366 |||||||| ||||||||||| ||| |||||||||| ||||| || ||||||||||||||| Sbjct: 103576 cttgtggctatgaatggtaagatgattggcagtaaacctctctatgtagcacttgcacaa 103635 Query: 1367 cgaaaggaagaaagaagagccaggctgcagg 1397 || |||||||||||||| || ||||| |||| Sbjct: 103636 cgcaaggaagaaagaagggcaaggcttcagg 103666 Score = 61.9 bits (31), Expect = 1e-05 Identities = 43/47 (91%) Strand = Plus / Plus Query: 1256 aaaggatctggttttgttgcatttaaatcttctgaagatgctacacg 1302 ||||||||||| |||||||||||||| ||| ||||||||||| |||| Sbjct: 103440 aaaggatctggctttgttgcatttaagtctgctgaagatgcttcacg 103486 Score = 46.1 bits (23), Expect = 0.57 Identities = 23/23 (100%) Strand = Plus / Plus Query: 165 tgatggcggcgcaggttcaggcg 187 ||||||||||||||||||||||| Sbjct: 101423 tgatggcggcgcaggttcaggcg 101445
>ref|NM_001069118.1| Oryza sativa (japonica cultivar-group) Os09g0115400 (Os09g0115400) mRNA, complete cds Length = 2409 Score = 363 bits (183), Expect = 2e-96 Identities = 423/503 (84%) Strand = Plus / Plus Query: 296 tacgtgggggatctggacgtgagcgtgcaagacgcgcagctctttgacgtcttcagccag 355 ||||| |||||||| ||||| |||||||| |||||||||||||| ||||||||| ||| Sbjct: 260 tacgtcggggatctcgacgtcagcgtgcaggacgcgcagctcttcgacgtcttcgcgcag 319 Query: 356 gtcggctcggtggtgtctgtgcgcgtgtgccgggacgtcaacaccaggatgtccctaggc 415 |||||| || || || |||||||| ||| ||||||||||||| ||| ||| || ||| Sbjct: 320 gtcggcggcgtcgtctccgtgcgcgtctgcagggacgtcaacacgcggaggtcgctcggc 379 Query: 416 tacgcgtacgtcaacttcagcagccctgccgatgctgcaagggcattggaaatgctaaac 475 ||||| |||||||||| ||||||||| |||||||||||| | || ||||||||||| ||| Sbjct: 380 tacgcctacgtcaactacagcagccccgccgatgctgcacgagcgttggaaatgctcaac 439 Query: 476 ttcactcctgttaatgggaagcctatcaggataatgtattctaaccgtgaccccagctca 535 ||||||||| | ||||| || ||||||||||| ||||||||||||||||||||||||| Sbjct: 440 ttcactcctatcaatggaaaacctatcaggatcatgtattctaaccgtgaccccagcttg 499 Query: 536 cgtaaaagtggtgctgcaaatatatttatcaagaatcttgacaagtcaatagataacaaa 595 || || ||||| | |||||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 500 cgcaagagtggcacagcaaatatttttatcaagaaccttgataagtcgatagacaacaaa 559 Query: 596 gcgctatatgacacattttctgcctttggaaacattctttcatgcaaagttgctacagaa 655 || | ||||| || || | || |||||||||||||||||||| |||||||| ||||| Sbjct: 560 gctttgtatgatactttctgtgtgtttggaaacattctttcatgtaaagttgcaacagat 619 Query: 656 atgtctggagaatccaagggttatggttttgttcagtatgagcaggacgaatcagcacaa 715 ||||||||||| ||||| ||||| |||||||||||||||| ||| || |||| ||| Sbjct: 620 gcttctggagaatcgaagggctatggctttgttcagtatgagcgggatgaggcagctcaa 679 Query: 716 aatgctattaatgagctcaatgggatgcttttgaatgacaaaaaggtttatgttgggcct 775 ||||||| || | |||||||| |||||| |||||||||||||||| |||||||||||| Sbjct: 680 gctgctattgataaactcaatggcatgcttatgaatgacaaaaaggtgtatgttgggcct 739 Query: 776 tttgttcgtaaacaggaaaggga 798 || ||||||| ||||| ||||| Sbjct: 740 ttcattcgtaagcaggagaggga 762 Score = 254 bits (128), Expect = 1e-63 Identities = 702/892 (78%), Gaps = 6/892 (0%) Strand = Plus / Plus Query: 817 caagttcaataatgtgtatgtaaagaatctatcagaatctaccactgaagataatctgaa 876 ||||||||||||||| ||||||||||| || || || ||| ||||||||| | |||| Sbjct: 781 caagttcaataatgtctatgtaaagaacctgtctgagaatactactgaagatgacttgaa 840 Query: 877 agaattgtttggtaattttggacctataactagtgttattgtagtgcgagcagatgatgg 936 ||| | ||||| || |||||| | || ||||| | | ||||| |||| | | ||||| Sbjct: 841 ggaaatctttggaaaatttggaaccatcactagcgctgttgtaatgcgtgagggagatgg 900 Query: 937 taaatccagatgctttggatttgtgaactttgaaaatccggatgatgctgtacatgctgt 996 | ||||| || ||||||||||| |||||||||| ||| |||||||||| || ||||| Sbjct: 901 aagatccaagtgttttggatttgttaactttgaaagtccagatgatgctgctcaggctgt 960 Query: 997 tgaggatttgaatggcaagaaatttgatgataaggaattatatgttggtagagctcagaa 1056 | || ||||||||||||| |||||||||||||||| |||||||| || || || || Sbjct: 961 ccaagagctgaatggcaagaagtttgatgataaggaatggtatgttggaagggcacaaaa 1020 Query: 1057 gaagtctgaaagggagatgcagctgaaagaaagtttcgagaaaagcaataaagagacagc 1116 ||| || ||||| |||||| | ||||||| | || ||||| | | | |||| |||| Sbjct: 1021 gaaatcggaaagagagatggaattgaaagagaaatttgagaagaaccttcaagaagcagc 1080 Query: 1117 cgacaggaatcaaggcactaacttgtatttgaaaaacttggatggtagtgttgatgacga 1176 || | | ||||| ||||||| |||| |||| |||||||||| |||||||||||| || Sbjct: 1081 agataagtatcaaaacactaacctgtacctgaagaacttggatgatagtgttgatgatga 1140 Query: 1177 tgagaagttaaaagaactttttgccgaatttggcactataacttcttgcaaggttatgcg 1236 | ||||| | || |||||||| || | ||||||||| ||||| |||||||| ||||| Sbjct: 1141 t---aagttgagggagctttttgctgagtatggcactattacttcctgcaaggtgatgcg 1197 Query: 1237 ggattcaaatggggtcaacaaaggatctggttttgttgcatttaaatcttctgaagatgc 1296 |||||||||||| |||| || ||| ||||| |||||||| ||||||||| |||||||||| Sbjct: 1198 ggattcaaatggtgtcagcagaggttctggatttgttgcgtttaaatctgctgaagatgc 1257 Query: 1297 tacacgggctcttgtggcaatgaatggtaaaatggttggcagtaagcctctttacgtagc 1356 | | || ||||||| | |||||| | || ||||||||||| || || || ||||| || Sbjct: 1258 ttcccgagctcttgccgaaatgaacagcaagatggttggcagcaaaccgctctacgttgc 1317 Query: 1357 acttgcacaacgaaaggaagaaagaagagccaggctgcaggcgcagttttcgcaaatgcg 1416 |||||||| || |||||||| || | ||| ||||||||||| || ||||| ||| || | Sbjct: 1318 gcttgcacagcgcaaggaagacaggaaagcaaggctgcaggcacaattttcacaactgag 1377 Query: 1417 tcctgt---gatgccacctccagttgctccacgcatgcccatgtacccccctggtgttcc 1473 ||||| | | ||| |||||| ||| ||||||||||||| || ||||||||||| Sbjct: 1378 gcctgtcccacttgctccttcagttggtcctcgcatgcccatgtttccacctggtgttcc 1437 Query: 1474 tggtatgggccaacagctattctatggccaaccacctccagcttttgttaacccacagcc 1533 ||| | || || || || |||||||| || || |||||||| ||| | ||| ||||||| Sbjct: 1438 tggagttggacagcaactgttctatggtcagccccctccagcgtttatcaacacacagcc 1497 Query: 1534 tggatatggtttccagcaacatatgattcctggaatgagacctggtgttgctccgatgcc 1593 ||| | || |||||||| | | | || ||||| ||||| || |||| | ||| ||||| Sbjct: 1498 tggtttcggcttccagcagcctcttatgcctgggatgaggccaggtgcaggtccaatgcc 1557 Query: 1594 aaattttgtcatgccaatggtccagcaaggtcaacaaccacaacgcccatctgggaggcg 1653 || ||| ||||||| ||||| |||||||| ||||| || || || || |||| ||||| Sbjct: 1558 gaactttatcatgcctatggttcagcaaggacaacagccgcagcgtccggctggtaggcg 1617 Query: 1654 tgcaggtgctggtggaatgcagcagccaatgccaatgggtcaccagcagatg 1705 ||| |||||||||||||||||||| || |||||||||||||| || |||||| Sbjct: 1618 tgctggtgctggtggaatgcagcaacccatgccaatgggtcagcaacagatg 1669 Score = 131 bits (66), Expect = 1e-26 Identities = 174/210 (82%) Strand = Plus / Plus Query: 1858 tggagcattggcatctgcacttgccaactctccgccggagcagcaacgactgatgcttgg 1917 |||||||||||| ||||||| |||||| | | || || |||||| || |||||||||| Sbjct: 1822 tggagcattggctactgcactggccaacgcagcccctgatcagcaaagaatgatgcttgg 1881 Query: 1918 tgaaagcttgtatccacttgttgatcagctggagcatgatcaggctgccaaggttaccgg 1977 ||| | ||||||||| ||||||||||||||||||||||| |||||||| ||||| || || Sbjct: 1882 tgagaacttgtatcctcttgttgatcagctggagcatgagcaggctgcgaaggtgactgg 1941 Query: 1978 tatgcttttggagatggaccaaactgaggttcttcatctaatcgagtcacctgatgcttt 2037 ||||| ||||||||||||| |||||||| || || || ||||||| || || ||| | Sbjct: 1942 catgctgctggagatggaccagactgaggtgctgcacctgctcgagtctccagaggctct 2001 Query: 2038 gaagtctaaggtcgctgaagctatggaggt 2067 ||| | ||||| |||||||| |||||||| Sbjct: 2002 caaggccaaggttgctgaagccatggaggt 2031
>dbj|AK067816.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116F07, full insert sequence Length = 2314 Score = 363 bits (183), Expect = 2e-96 Identities = 423/503 (84%) Strand = Plus / Plus Query: 296 tacgtgggggatctggacgtgagcgtgcaagacgcgcagctctttgacgtcttcagccag 355 ||||| |||||||| ||||| |||||||| |||||||||||||| ||||||||| ||| Sbjct: 254 tacgtcggggatctcgacgtcagcgtgcaggacgcgcagctcttcgacgtcttcgcgcag 313 Query: 356 gtcggctcggtggtgtctgtgcgcgtgtgccgggacgtcaacaccaggatgtccctaggc 415 |||||| || || || |||||||| ||| ||||||||||||| ||| ||| || ||| Sbjct: 314 gtcggcggcgtcgtctccgtgcgcgtctgcagggacgtcaacacgcggaggtcgctcggc 373 Query: 416 tacgcgtacgtcaacttcagcagccctgccgatgctgcaagggcattggaaatgctaaac 475 ||||| |||||||||| ||||||||| |||||||||||| | || ||||||||||| ||| Sbjct: 374 tacgcctacgtcaactacagcagccccgccgatgctgcacgagcgttggaaatgctcaac 433 Query: 476 ttcactcctgttaatgggaagcctatcaggataatgtattctaaccgtgaccccagctca 535 ||||||||| | ||||| || ||||||||||| ||||||||||||||||||||||||| Sbjct: 434 ttcactcctatcaatggaaaacctatcaggatcatgtattctaaccgtgaccccagcttg 493 Query: 536 cgtaaaagtggtgctgcaaatatatttatcaagaatcttgacaagtcaatagataacaaa 595 || || ||||| | |||||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 494 cgcaagagtggcacagcaaatatttttatcaagaaccttgataagtcgatagacaacaaa 553 Query: 596 gcgctatatgacacattttctgcctttggaaacattctttcatgcaaagttgctacagaa 655 || | ||||| || || | || |||||||||||||||||||| |||||||| ||||| Sbjct: 554 gctttgtatgatactttctgtgtgtttggaaacattctttcatgtaaagttgcaacagat 613 Query: 656 atgtctggagaatccaagggttatggttttgttcagtatgagcaggacgaatcagcacaa 715 ||||||||||| ||||| ||||| |||||||||||||||| ||| || |||| ||| Sbjct: 614 gcttctggagaatcgaagggctatggctttgttcagtatgagcgggatgaggcagctcaa 673 Query: 716 aatgctattaatgagctcaatgggatgcttttgaatgacaaaaaggtttatgttgggcct 775 ||||||| || | |||||||| |||||| |||||||||||||||| |||||||||||| Sbjct: 674 gctgctattgataaactcaatggcatgcttatgaatgacaaaaaggtgtatgttgggcct 733 Query: 776 tttgttcgtaaacaggaaaggga 798 || ||||||| ||||| ||||| Sbjct: 734 ttcattcgtaagcaggagaggga 756 Score = 254 bits (128), Expect = 1e-63 Identities = 702/892 (78%), Gaps = 6/892 (0%) Strand = Plus / Plus Query: 817 caagttcaataatgtgtatgtaaagaatctatcagaatctaccactgaagataatctgaa 876 ||||||||||||||| ||||||||||| || || || ||| ||||||||| | |||| Sbjct: 775 caagttcaataatgtctatgtaaagaacctgtctgagaatactactgaagatgacttgaa 834 Query: 877 agaattgtttggtaattttggacctataactagtgttattgtagtgcgagcagatgatgg 936 ||| | ||||| || |||||| | || ||||| | | ||||| |||| | | ||||| Sbjct: 835 ggaaatctttggaaaatttggaaccatcactagcgctgttgtaatgcgtgagggagatgg 894 Query: 937 taaatccagatgctttggatttgtgaactttgaaaatccggatgatgctgtacatgctgt 996 | ||||| || ||||||||||| |||||||||| ||| |||||||||| || ||||| Sbjct: 895 aagatccaagtgttttggatttgttaactttgaaagtccagatgatgctgctcaggctgt 954 Query: 997 tgaggatttgaatggcaagaaatttgatgataaggaattatatgttggtagagctcagaa 1056 | || ||||||||||||| |||||||||||||||| |||||||| || || || || Sbjct: 955 ccaagagctgaatggcaagaagtttgatgataaggaatggtatgttggaagggcacaaaa 1014 Query: 1057 gaagtctgaaagggagatgcagctgaaagaaagtttcgagaaaagcaataaagagacagc 1116 ||| || ||||| |||||| | ||||||| | || ||||| | | | |||| |||| Sbjct: 1015 gaaatcggaaagagagatggaattgaaagagaaatttgagaagaaccttcaagaagcagc 1074 Query: 1117 cgacaggaatcaaggcactaacttgtatttgaaaaacttggatggtagtgttgatgacga 1176 || | | ||||| ||||||| |||| |||| |||||||||| |||||||||||| || Sbjct: 1075 agataagtatcaaaacactaacctgtacctgaagaacttggatgatagtgttgatgatga 1134 Query: 1177 tgagaagttaaaagaactttttgccgaatttggcactataacttcttgcaaggttatgcg 1236 | ||||| | || |||||||| || | ||||||||| ||||| |||||||| ||||| Sbjct: 1135 t---aagttgagggagctttttgctgagtatggcactattacttcctgcaaggtgatgcg 1191 Query: 1237 ggattcaaatggggtcaacaaaggatctggttttgttgcatttaaatcttctgaagatgc 1296 |||||||||||| |||| || ||| ||||| |||||||| ||||||||| |||||||||| Sbjct: 1192 ggattcaaatggtgtcagcagaggttctggatttgttgcgtttaaatctgctgaagatgc 1251 Query: 1297 tacacgggctcttgtggcaatgaatggtaaaatggttggcagtaagcctctttacgtagc 1356 | | || ||||||| | |||||| | || ||||||||||| || || || ||||| || Sbjct: 1252 ttcccgagctcttgccgaaatgaacagcaagatggttggcagcaaaccgctctacgttgc 1311 Query: 1357 acttgcacaacgaaaggaagaaagaagagccaggctgcaggcgcagttttcgcaaatgcg 1416 |||||||| || |||||||| || | ||| ||||||||||| || ||||| ||| || | Sbjct: 1312 gcttgcacagcgcaaggaagacaggaaagcaaggctgcaggcacaattttcacaactgag 1371 Query: 1417 tcctgt---gatgccacctccagttgctccacgcatgcccatgtacccccctggtgttcc 1473 ||||| | | ||| |||||| ||| ||||||||||||| || ||||||||||| Sbjct: 1372 gcctgtcccacttgctccttcagttggtcctcgcatgcccatgtttccacctggtgttcc 1431 Query: 1474 tggtatgggccaacagctattctatggccaaccacctccagcttttgttaacccacagcc 1533 ||| | || || || || |||||||| || || |||||||| ||| | ||| ||||||| Sbjct: 1432 tggagttggacagcaactgttctatggtcagccccctccagcgtttatcaacacacagcc 1491 Query: 1534 tggatatggtttccagcaacatatgattcctggaatgagacctggtgttgctccgatgcc 1593 ||| | || |||||||| | | | || ||||| ||||| || |||| | ||| ||||| Sbjct: 1492 tggtttcggcttccagcagcctcttatgcctgggatgaggccaggtgcaggtccaatgcc 1551 Query: 1594 aaattttgtcatgccaatggtccagcaaggtcaacaaccacaacgcccatctgggaggcg 1653 || ||| ||||||| ||||| |||||||| ||||| || || || || |||| ||||| Sbjct: 1552 gaactttatcatgcctatggttcagcaaggacaacagccgcagcgtccggctggtaggcg 1611 Query: 1654 tgcaggtgctggtggaatgcagcagccaatgccaatgggtcaccagcagatg 1705 ||| |||||||||||||||||||| || |||||||||||||| || |||||| Sbjct: 1612 tgctggtgctggtggaatgcagcaacccatgccaatgggtcagcaacagatg 1663 Score = 131 bits (66), Expect = 1e-26 Identities = 174/210 (82%) Strand = Plus / Plus Query: 1858 tggagcattggcatctgcacttgccaactctccgccggagcagcaacgactgatgcttgg 1917 |||||||||||| ||||||| |||||| | | || || |||||| || |||||||||| Sbjct: 1816 tggagcattggctactgcactggccaacgcagcccctgatcagcaaagaatgatgcttgg 1875 Query: 1918 tgaaagcttgtatccacttgttgatcagctggagcatgatcaggctgccaaggttaccgg 1977 ||| | ||||||||| ||||||||||||||||||||||| |||||||| ||||| || || Sbjct: 1876 tgagaacttgtatcctcttgttgatcagctggagcatgagcaggctgcgaaggtgactgg 1935 Query: 1978 tatgcttttggagatggaccaaactgaggttcttcatctaatcgagtcacctgatgcttt 2037 ||||| ||||||||||||| |||||||| || || || ||||||| || || ||| | Sbjct: 1936 catgctgctggagatggaccagactgaggtgctgcacctgctcgagtctccagaggctct 1995 Query: 2038 gaagtctaaggtcgctgaagctatggaggt 2067 ||| | ||||| |||||||| |||||||| Sbjct: 1996 caaggccaaggttgctgaagccatggaggt 2025
>dbj|AK101706.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060I24, full insert sequence Length = 2410 Score = 355 bits (179), Expect = 5e-94 Identities = 422/503 (83%) Strand = Plus / Plus Query: 296 tacgtgggggatctggacgtgagcgtgcaagacgcgcagctctttgacgtcttcagccag 355 ||||| |||||||| ||||| |||||||| |||||||||||||| ||||||||| ||| Sbjct: 261 tacgtcggggatctcgacgtcagcgtgcaggacgcgcagctcttcgacgtcttcgcgcag 320 Query: 356 gtcggctcggtggtgtctgtgcgcgtgtgccgggacgtcaacaccaggatgtccctaggc 415 |||||| || || || |||||||| ||| ||||||||||||| ||| ||| || ||| Sbjct: 321 gtcggcggcgtcgtctccgtgcgcgtctgcagggacgtcaacacgcggaggtcgctcggc 380 Query: 416 tacgcgtacgtcaacttcagcagccctgccgatgctgcaagggcattggaaatgctaaac 475 ||||| |||||||||| ||||||||| |||||||||||| | || ||||||||||| ||| Sbjct: 381 tacgcctacgtcaactacagcagccccgccgatgctgcacgagcgttggaaatgctcaac 440 Query: 476 ttcactcctgttaatgggaagcctatcaggataatgtattctaaccgtgaccccagctca 535 ||||||||| | ||||| || ||||||||||| ||||||||||||||||||||||||| Sbjct: 441 ttcactcctatcaatggaaaacctatcaggatcatgtattctaaccgtgaccccagcttg 500 Query: 536 cgtaaaagtggtgctgcaaatatatttatcaagaatcttgacaagtcaatagataacaaa 595 || || ||||| | |||||||| ||||||||||| ||||| ||||| ||||| |||||| Sbjct: 501 cgcaagagtggcacagcaaatatttttatcaagaaccttgataagtcgatagacaacaaa 560 Query: 596 gcgctatatgacacattttctgcctttggaaacattctttcatgcaaagttgctacagaa 655 | | ||||| || || | || |||||||||||||||||||| |||||||| ||||| Sbjct: 561 gttttgtatgatactttctgtgtgtttggaaacattctttcatgtaaagttgcaacagat 620 Query: 656 atgtctggagaatccaagggttatggttttgttcagtatgagcaggacgaatcagcacaa 715 ||||||||||| ||||| ||||| |||||||||||||||| ||| || |||| ||| Sbjct: 621 gcttctggagaatcgaagggctatggctttgttcagtatgagcgggatgaggcagctcaa 680 Query: 716 aatgctattaatgagctcaatgggatgcttttgaatgacaaaaaggtttatgttgggcct 775 ||||||| || | |||||||| |||||| |||||||||||||||| |||||||||||| Sbjct: 681 gctgctattgataaactcaatggcatgcttatgaatgacaaaaaggtgtatgttgggcct 740 Query: 776 tttgttcgtaaacaggaaaggga 798 || ||||||| ||||| ||||| Sbjct: 741 ttcattcgtaagcaggagaggga 763 Score = 254 bits (128), Expect = 1e-63 Identities = 702/892 (78%), Gaps = 6/892 (0%) Strand = Plus / Plus Query: 817 caagttcaataatgtgtatgtaaagaatctatcagaatctaccactgaagataatctgaa 876 ||||||||||||||| ||||||||||| || || || ||| ||||||||| | |||| Sbjct: 782 caagttcaataatgtctatgtaaagaacctgtctgagaatactactgaagatgacttgaa 841 Query: 877 agaattgtttggtaattttggacctataactagtgttattgtagtgcgagcagatgatgg 936 ||| | ||||| || |||||| | || ||||| | | ||||| |||| | | ||||| Sbjct: 842 ggaaatctttggaaaatttggaaccatcactagcgctgttgtaatgcgtgagggagatgg 901 Query: 937 taaatccagatgctttggatttgtgaactttgaaaatccggatgatgctgtacatgctgt 996 | ||||| || ||||||||||| |||||||||| ||| |||||||||| || ||||| Sbjct: 902 aagatccaagtgttttggatttgttaactttgaaagtccagatgatgctgctcaggctgt 961 Query: 997 tgaggatttgaatggcaagaaatttgatgataaggaattatatgttggtagagctcagaa 1056 | || ||||||||||||| |||||||||||||||| |||||||| || || || || Sbjct: 962 ccaagagctgaatggcaagaagtttgatgataaggaatggtatgttggaagggcacaaaa 1021 Query: 1057 gaagtctgaaagggagatgcagctgaaagaaagtttcgagaaaagcaataaagagacagc 1116 ||| || ||||| |||||| | ||||||| | || ||||| | | | |||| |||| Sbjct: 1022 gaaatcggaaagagagatggaattgaaagagaaatttgagaagaaccttcaagaagcagc 1081 Query: 1117 cgacaggaatcaaggcactaacttgtatttgaaaaacttggatggtagtgttgatgacga 1176 || | | ||||| ||||||| |||| |||| |||||||||| |||||||||||| || Sbjct: 1082 agataagtatcaaaacactaacctgtacctgaagaacttggatgatagtgttgatgatga 1141 Query: 1177 tgagaagttaaaagaactttttgccgaatttggcactataacttcttgcaaggttatgcg 1236 | ||||| | || |||||||| || | ||||||||| ||||| |||||||| ||||| Sbjct: 1142 t---aagttgagggagctttttgctgagtatggcactattacttcctgcaaggtgatgcg 1198 Query: 1237 ggattcaaatggggtcaacaaaggatctggttttgttgcatttaaatcttctgaagatgc 1296 |||||||||||| |||| || ||| ||||| |||||||| ||||||||| |||||||||| Sbjct: 1199 ggattcaaatggtgtcagcagaggttctggatttgttgcgtttaaatctgctgaagatgc 1258 Query: 1297 tacacgggctcttgtggcaatgaatggtaaaatggttggcagtaagcctctttacgtagc 1356 | | || ||||||| | |||||| | || ||||||||||| || || || ||||| || Sbjct: 1259 ttcccgagctcttgccgaaatgaacagcaagatggttggcagcaaaccgctctacgttgc 1318 Query: 1357 acttgcacaacgaaaggaagaaagaagagccaggctgcaggcgcagttttcgcaaatgcg 1416 |||||||| || |||||||| || | ||| ||||||||||| || ||||| ||| || | Sbjct: 1319 gcttgcacagcgcaaggaagacaggaaagcaaggctgcaggcacaattttcacaactgag 1378 Query: 1417 tcctgt---gatgccacctccagttgctccacgcatgcccatgtacccccctggtgttcc 1473 ||||| | | ||| |||||| ||| ||||||||||||| || ||||||||||| Sbjct: 1379 gcctgtcccacttgctccttcagttggtcctcgcatgcccatgtttccacctggtgttcc 1438 Query: 1474 tggtatgggccaacagctattctatggccaaccacctccagcttttgttaacccacagcc 1533 ||| | || || || || |||||||| || || |||||||| ||| | ||| ||||||| Sbjct: 1439 tggagttggacagcaactgttctatggtcagccccctccagcgtttatcaacacacagcc 1498 Query: 1534 tggatatggtttccagcaacatatgattcctggaatgagacctggtgttgctccgatgcc 1593 ||| | || |||||||| | | | || ||||| ||||| || |||| | ||| ||||| Sbjct: 1499 tggtttcggcttccagcagcctcttatgcctgggatgaggccaggtgcaggtccaatgcc 1558 Query: 1594 aaattttgtcatgccaatggtccagcaaggtcaacaaccacaacgcccatctgggaggcg 1653 || ||| ||||||| ||||| |||||||| ||||| || || || || |||| ||||| Sbjct: 1559 gaactttatcatgcctatggttcagcaaggacaacagccgcagcgtccggctggtaggcg 1618 Query: 1654 tgcaggtgctggtggaatgcagcagccaatgccaatgggtcaccagcagatg 1705 ||| |||||||||||||||||||| || |||||||||||||| || |||||| Sbjct: 1619 tgctggtgctggtggaatgcagcaacccatgccaatgggtcagcaacagatg 1670 Score = 131 bits (66), Expect = 1e-26 Identities = 174/210 (82%) Strand = Plus / Plus Query: 1858 tggagcattggcatctgcacttgccaactctccgccggagcagcaacgactgatgcttgg 1917 |||||||||||| ||||||| |||||| | | || || |||||| || |||||||||| Sbjct: 1823 tggagcattggctactgcactggccaacgcagcccctgatcagcaaagaatgatgcttgg 1882 Query: 1918 tgaaagcttgtatccacttgttgatcagctggagcatgatcaggctgccaaggttaccgg 1977 ||| | ||||||||| ||||||||||||||||||||||| |||||||| ||||| || || Sbjct: 1883 tgagaacttgtatcctcttgttgatcagctggagcatgagcaggctgcgaaggtgactgg 1942 Query: 1978 tatgcttttggagatggaccaaactgaggttcttcatctaatcgagtcacctgatgcttt 2037 ||||| ||||||||||||| |||||||| || || || ||||||| || || ||| | Sbjct: 1943 catgctgctggagatggaccagactgaggtgctgcacctgctcgagtctccagaggctct 2002 Query: 2038 gaagtctaaggtcgctgaagctatggaggt 2067 ||| | ||||| |||||||| |||||||| Sbjct: 2003 caaggccaaggttgctgaagccatggaggt 2032
>gb|U81318.1|TAU81318 Triticum aestivum poly(A)-binding protein (wheatpab) mRNA, complete cds Length = 2237 Score = 347 bits (175), Expect = 1e-91 Identities = 628/779 (80%) Strand = Plus / Plus Query: 296 tacgtgggggatctggacgtgagcgtgcaagacgcgcagctctttgacgtcttcagccag 355 |||||||| || || |||||||||||||| |||||||||||||| ||||||||| |||| Sbjct: 166 tacgtgggcgacctcgacgtgagcgtgcaggacgcgcagctcttcgacgtcttcgcccag 225 Query: 356 gtcggctcggtggtgtctgtgcgcgtgtgccgggacgtcaacaccaggatgtccctaggc 415 ||||| || || || |||||||| ||| ||||||||| | | ||| ||| || || Sbjct: 226 atcggcggcgtcgtctccgtgcgcgtctgcagggacgtcacctcgcggaagtcgctcgga 285 Query: 416 tacgcgtacgtcaacttcagcagccctgccgatgctgcaagggcattggaaatgctaaac 475 ||||| |||||||||| || || ||| || || |||||| |||| | |||||||| ||| Sbjct: 286 tacgcctacgtcaactacaacaccccggctgacgctgcacgggctcttgaaatgctcaac 345 Query: 476 ttcactcctgttaatgggaagcctatcaggataatgtattctaaccgtgaccccagctca 535 ||||||||| | ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 346 ttcactcctatcaatggacggcctatcaggataatgtattctaaccgtgaccccagcttg 405 Query: 536 cgtaaaagtggtgctgcaaatatatttatcaagaatcttgacaagtcaatagataacaaa 595 || || ||||| | |||||||||||||| |||||||||||||||||||| || |||||| Sbjct: 406 cgcaagagtggcacagcaaatatatttattaagaatcttgacaagtcaattgacaacaaa 465 Query: 596 gcgctatatgacacattttctgcctttggaaacattctttcatgcaaagttgctacagaa 655 || | ||||||||||||| || |||||||||||||||||||| |||||||| ||||| Sbjct: 466 gctttgtatgacacattttgtgtgtttggaaacattctttcatgtaaagttgcaacagat 525 Query: 656 atgtctggagaatccaagggttatggttttgttcagtatgagcaggacgaatcagcacaa 715 |||| ||||| ||||| ||||| || |||||||| |||| ||| || | || || Sbjct: 526 cctgctggggaatcaaagggctatggcttcgttcagtacgagcgggatgaggctgctcat 585 Query: 716 aatgctattaatgagctcaatgggatgcttttgaatgacaaaaaggtttatgttgggcct 775 |||||| | | || |||||||||||| |||||||||| ||||| |||||||||||| Sbjct: 586 gctgctatcgagaaactgaatgggatgcttatgaatgacaagaaggtgtatgttgggcct 645 Query: 776 tttgttcgtaaacaggaaagggaaaatgtttttggcagtcccaagttcaataatgtgtat 835 || |||||||| ||||| || || || | |||| | ||||||||||||||| ||| Sbjct: 646 ttcgttcgtaagcaggagagagataactctcccggcaatgtcaagttcaataatgtctat 705 Query: 836 gtaaagaatctatcagaatctaccactgaagataatctgaaagaattgtttggtaatttt 895 || ||||| ||| | || |||||||||||||| | |||| ||| | ||||| || ||| Sbjct: 706 gttaagaacctagctgagactaccactgaagatgacttgaaggaaatctttgggaagttt 765 Query: 896 ggacctataactagtgttattgtagtgcgagcagatgatggtaaatccagatgctttgga 955 ||| | ||||| |||||| ||||| |||| | | ||||| | ||||| || |||||| Sbjct: 766 ggagcaataacaagtgttgttgtaatgcgggatggggatggaagatccaagtgttttgga 825 Query: 956 tttgtgaactttgaaaatccggatgatgctgtacatgctgttgaggatttgaatggcaag 1015 |||||||| ||||||| ||| ||||| |||| | |||||| | ||||||||||||||| Sbjct: 826 tttgtgaattttgaaagtccagatgaagctgctctggctgttcaagatttgaatggcaag 885 Query: 1016 aaatttgatgataaggaattatatgttggtagagctcagaagaagtctgaaagggagat 1074 |||||| ||| ||||||| |||||||| ||||| ||||| ||||| ||||||||||| Sbjct: 886 aaatttagtgacaaggaatggtatgttggaagagcgcagaaaaagtcagaaagggagat 944 Score = 180 bits (91), Expect = 2e-41 Identities = 193/227 (85%) Strand = Plus / Plus Query: 1862 gcattggcatctgcacttgccaactctccgccggagcagcaacgactgatgcttggtgaa 1921 |||||||| |||||||||||||| || || || ||| |||| || |||||||||| || Sbjct: 1726 gcattggcttctgcacttgccaattcacccccagagacgcaaagaatgatgcttggcgag 1785 Query: 1922 agcttgtatccacttgttgatcagctggagcatgatcaggctgccaaggttaccggtatg 1981 | |||||| || |||||||||||||||||||| || |||||||||||||| ||||| ||| Sbjct: 1786 aacttgtaccctcttgttgatcagctggagcacgaccaggctgccaaggtgaccggcatg 1845 Query: 1982 cttttggagatggaccaaactgaggttcttcatctaatcgagtcacctgatgctttgaag 2041 ||| ||||||||||||| |||||||| ||||| || | ||||| || || ||| | ||| Sbjct: 1846 cttctggagatggaccagactgaggtgcttcacctgcttgagtcgccagacgctctcaag 1905 Query: 2042 tctaaggtcgctgaagctatggaggttctccgcagcgctcagcagca 2088 | ||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 1906 gccaaggttgctgaagccatggaggttctccgcagcgctcagcagca 1952 Score = 165 bits (83), Expect = 9e-37 Identities = 167/195 (85%) Strand = Plus / Plus Query: 1511 ccagcttttgttaacccacagcctggatatggtttccagcaacatatgattcctggaatg 1570 ||||| ||| |||||||||||||||||| ||| |||||||||| | | || || |||||| Sbjct: 1375 ccagcgtttattaacccacagcctggatttggcttccagcaacctttcatgccgggaatg 1434 Query: 1571 agacctggtgttgctccgatgccaaattttgtcatgccaatggtccagcaaggtcaacaa 1630 || || |||| ||||||||||||||| ||| | ||||| ||||| |||||||| |||||| Sbjct: 1435 aggccaggtggtgctccgatgccaaactttatgatgcctatggttcagcaaggacaacaa 1494 Query: 1631 ccacaacgcccatctgggaggcgtgcaggtgctggtggaatgcagcagccaatgccaatg 1690 |||||||||||| |||| ||||| || |||||||||||||||||||| | |||| ||| Sbjct: 1495 ccacaacgcccagctggtaggcgagctggtgctggtggaatgcagcaatccatgcagatg 1554 Query: 1691 ggtcaccagcagatg 1705 ||||| ||||||||| Sbjct: 1555 ggtcagcagcagatg 1569 Score = 121 bits (61), Expect = 1e-23 Identities = 231/287 (80%), Gaps = 3/287 (1%) Strand = Plus / Plus Query: 1136 aacttgtatttgaaaaacttggatggtagtgttgatgacgatgagaagttaaaagaactt 1195 ||||||||| |||| |||||||||| || |||||| |||||| ||||| |||||| Sbjct: 1006 aacttgtatctgaagaacttggatgatactgttga---cgatgaaaagttgcgtgaactt 1062 Query: 1196 tttgccgaatttggcactataacttcttgcaaggttatgcgggattcaaatggggtcaac 1255 ||||| || || || ||||| ||||| |||||||||||||| |||||||| || | | | Sbjct: 1063 tttgctgagttcggaactattacttcctgcaaggttatgcgtgattcaaacggtgctagc 1122 Query: 1256 aaaggatctggttttgttgcatttaaatcttctgaagatgctacacgggctcttgtggca 1315 | ||| ||||| ||||| || ||||||||| |||| |||||| | || ||||||| | | Sbjct: 1123 agaggttctggatttgtcgcttttaaatctgctgatgatgcttcccgagctcttgctgaa 1182 Query: 1316 atgaatggtaaaatggttggcagtaagcctctttacgtagcacttgcacaacgaaaggaa 1375 ||||| || |||||||||| ||| || ||||| || ||||| ||||| || |||||| Sbjct: 1183 atgaacaacaagatggttggcaataaaccactttatgttgcactcgcacagcgcaaggaa 1242 Query: 1376 gaaagaagagccaggctgcaggcgcagttttcgcaaatgcgtcctgt 1422 || || | ||| ||||||||||| |||||||| |||||||||||||| Sbjct: 1243 gacaggaaagctaggctgcaggcacagttttcacaaatgcgtcctgt 1289
>gb|AY103895.1| Zea mays PCO112590 mRNA sequence Length = 1997 Score = 238 bits (120), Expect = 7e-59 Identities = 279/332 (84%) Strand = Plus / Plus Query: 473 aacttcactcctgttaatgggaagcctatcaggataatgtattctaaccgtgaccccagc 532 |||||||||||| | ||||| |||||||||||||| |||||||||||||||||||| ||| Sbjct: 2 aacttcactcctatcaatggaaagcctatcaggatcatgtattctaaccgtgaccctagc 61 Query: 533 tcacgtaaaagtggtgctgcaaatatatttatcaagaatcttgacaagtcaatagataac 592 || || ||||| || | | |||||||||||| ||||||||||| ||||||||||| ||| Sbjct: 62 tcgcgcaaaagcggcacaggaaatatatttattaagaatcttgataagtcaatagacaac 121 Query: 593 aaagcgctatatgacacattttctgcctttggaaacattctttcatgcaaagttgctaca 652 ||||| ||||||||||||| | ||| ||||| || || |||||||| ||| |||| ||| Sbjct: 122 aaagctttatatgacacattctgtgcatttgggaatatactttcatgtaaaattgcaaca 181 Query: 653 gaaatgtctggagaatccaagggttatggttttgttcagtatgagcaggacgaatcagca 712 || || |||||||| | ||| |||||||||||||||| |||| |||| ||||| ||| Sbjct: 182 gacccttcaggagaatcaaggggctatggttttgttcagtttgagaaggatgaatctgca 241 Query: 713 caaaatgctattaatgagctcaatgggatgcttttgaatgacaaaaaggtttatgttggg 772 || ||||||| || | ||||||||||||||| | |||||||| || || | |||||| Sbjct: 242 cagtctgctattgataaactcaatgggatgcttatcaatgacaagaaagtgtttgttgga 301 Query: 773 ccttttgttcgtaaacaggaaagggaaaatgt 804 |||||||||||||| ||||| ||||||||||| Sbjct: 302 ccttttgttcgtaagcaggacagggaaaatgt 333 Score = 174 bits (88), Expect = 9e-40 Identities = 403/507 (79%), Gaps = 12/507 (2%) Strand = Plus / Plus Query: 1190 gaactttttgccgaatttggcactataacttcttgcaaggttatgcgggattcaaatggg 1249 ||||| ||||| || | ||||| ||| ||||| |||||||||||||||||||| ||||| Sbjct: 716 gaactctttgctgagtatggcaatattacttcctgcaaggttatgcgggattcgaatggt 775 Query: 1250 gtcaacaaaggatctggttttgttgcatttaaatcttctgaagatgctacacgggctctt 1309 |||| || ||| ||||| |||||||| || |||||| |||||||||||| || |||||| Sbjct: 776 gtcagcagaggttctggatttgttgctttcaaatctgctgaagatgctaaccgagctctt 835 Query: 1310 gtggcaatgaatggtaaaatggttggcagtaagcctctttacgtagcacttgcacaacga 1369 || |||||||| ||||||||||| || ||||| ||||| ||||| ||||| || || Sbjct: 836 acggagatgaatggcaaaatggttggaagcaagcccctttatgtagctcttgcgcagcgt 895 Query: 1370 aaggaagaaagaagagccaggctgcaggcgcagttttcgcaaatgcgtcctgt---gatg 1426 || ||||| |||| || | ||| ||||| || ||||| |||||||||||||| ||| Sbjct: 896 aaagaagacagaaaggcaaagctacaggcacaattttcacaaatgcgtcctgttgcaatg 955 Query: 1427 ccacctccagttgctccacgcatgcccatgtacccccctggtgttcctggtatgggccaa 1486 | ||| |||| | ||| ||||||||||||| || |||||||| ||||| | || || Sbjct: 956 gcgccttcagtaggtcctcgcatgcccatgtttccacctggtgtccctggagttggtcag 1015 Query: 1487 cagctattctatggccaaccacctccagcttttgttaacccacagcctggatatggtttc 1546 ||||| |||||||| || ||||| ||||| || | ||||| ||| |||||| || |||| Sbjct: 1016 cagctgttctatggtcagccaccaccagccttcatcaaccctcaggctggatttgctttc 1075 Query: 1547 cagcaacatatgattcctggaatgagacctggtgttgctccgatgccaaattttgtcatg 1606 ||||||| | |||| ||||| ||||| ||||| || ||| ||||| || ||| | ||| Sbjct: 1076 cagcaacctctgatgcctggtatgaggcctgg---tggtccaatgccgaactttatgatg 1132 Query: 1607 ccaatggtccagcaaggtcaacaaccacaacgcccatctgggaggcgtgcaggtgctggt 1666 || ||||| |||||||| || |||||||| || || |||| || | |||||||| Sbjct: 1133 cctatggttcagcaaggacagcaaccacagcgtcctgctggtag------acgtgctggt 1186 Query: 1667 ggaatgcagcagccaatgccaatgggt 1693 |||||||||||||| |||||||||||| Sbjct: 1187 ggaatgcagcagcccatgccaatgggt 1213 Score = 117 bits (59), Expect = 2e-22 Identities = 167/203 (82%) Strand = Plus / Plus Query: 1872 ctgcacttgccaactctccgccggagcagcaacgactgatgcttggtgaaagcttgtatc 1931 |||||||||| ||| | || || || ||||| |||| ||||||||||| | | |||||| Sbjct: 1389 ctgcacttgctaacgccccaccagatcagcagagacttatgcttggtgagaacctgtatc 1448 Query: 1932 cacttgttgatcagctggagcatgatcaggctgccaaggttaccggtatgcttttggaga 1991 | |||||||| |||||||| | ||| |||||||||||||| || || ||||||||||||| Sbjct: 1449 ctcttgttgaacagctggaacgtgagcaggctgccaaggtcactggcatgcttttggaga 1508 Query: 1992 tggaccaaactgaggttcttcatctaatcgagtcacctgatgctttgaagtctaaggtcg 2051 |||| || || ||||||||||| || | ||||| || |||||| |||| | ||||| | Sbjct: 1509 tggatcagacggaggttcttcacctgctggagtcgccagatgctctgaaagccaaggttg 1568 Query: 2052 ctgaagctatggaggttctccgc 2074 ||||||| |||||||| |||||| Sbjct: 1569 ctgaagccatggaggtcctccgc 1591 Score = 111 bits (56), Expect = 1e-20 Identities = 122/144 (84%) Strand = Plus / Plus Query: 932 gatggtaaatccagatgctttggatttgtgaactttgaaaatccggatgatgctgtacat 991 ||||| |||||||| || ||||||||||| || ||||||||| | |||| ||||| || Sbjct: 461 gatggaaaatccaggtgttttggatttgtcaattttgaaaatgcagatgctgctgctcag 520 Query: 992 gctgttgaggatttgaatggcaagaaatttgatgataaggaattatatgttggtagagct 1051 |||||| | || ||||||||||||| ||| ||||||||||| | |||||||| ||||| Sbjct: 521 gctgttcaagagttgaatggcaagatattcaatgataaggaactgtatgttggaagagca 580 Query: 1052 cagaagaagtctgaaagggagatg 1075 ||||||||||||||||| |||||| Sbjct: 581 cagaagaagtctgaaagagagatg 604
>dbj|AK058316.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A07, full insert sequence Length = 1482 Score = 224 bits (113), Expect = 1e-54 Identities = 588/745 (78%), Gaps = 6/745 (0%) Strand = Plus / Plus Query: 964 ctttgaaaatccggatgatgctgtacatgctgttgaggatttgaatggcaagaaatttga 1023 |||||||| ||| |||||||||| || ||||| | || ||||||| ||||| ||||| Sbjct: 1 ctttgaaagtccagatgatgctgctcaggctgtccaagagctgaatggtaagaagtttga 60 Query: 1024 tgataaggaattatatgttggtagagctcagaagaagtctgaaagggagatgcagctgaa 1083 ||||||||||| |||||||| || || || ||||| || ||||| |||||| | |||| Sbjct: 61 tgataaggaatggtatgttggaagggcacaaaagaaatcggaaagagagatggaattgaa 120 Query: 1084 agaaagtttcgagaaaagcaataaagagacagccgacaggaatcaaggcactaacttgta 1143 ||| | || ||||| | | | |||| |||| || | | ||||| ||||||| |||| Sbjct: 121 agagaaatttgagaagaaccttcaagaagcagcagataagtatcaaaacactaacctgta 180 Query: 1144 tttgaaaaacttggatggtagtgttgatgacgatgagaagttaaaagaactttttgccga 1203 |||| |||||||||| |||||||||||| ||| ||||| | || |||||||| || Sbjct: 181 cctgaagaacttggatgatagtgttgatgatgat---aagttgagggagctttttgctga 237 Query: 1204 atttggcactataacttcttgcaaggttatgcgggattcaaatggggtcaacaaaggatc 1263 | ||||||||| ||||| |||||||| ||||||||||||||||| |||| || ||| || Sbjct: 238 gtatggcactattacttcctgcaaggtgatgcgggattcaaatggtgtcagcagaggttc 297 Query: 1264 tggttttgttgcatttaaatcttctgaagatgctacacgggctcttgtggcaatgaatgg 1323 ||| |||||||| ||||||||| ||||||||||| | || ||||||| | |||||| | Sbjct: 298 tggatttgttgcgtttaaatctgctgaagatgcttcccgagctcttgccgaaatgaacag 357 Query: 1324 taaaatggttggcagtaagcctctttacgtagcacttgcacaacgaaaggaagaaagaag 1383 || ||||||||||| || || || ||||| || |||||||| || |||||||| || | Sbjct: 358 caagatggttggcagcaaaccgctctacgttgcgcttgcacagcgcaaggaagacaggaa 417 Query: 1384 agccaggctgcaggcgcagttttcgcaaatgcgtcctgt---gatgccacctccagttgc 1440 ||| ||||||||||| || ||||| ||| || | ||||| | | ||| |||||| Sbjct: 418 agcaaggctgcaggcacaattttcacaactgaggcctgtcccacttgctccttcagttgg 477 Query: 1441 tccacgcatgcccatgtacccccctggtgttcctggtatgggccaacagctattctatgg 1500 ||| ||||||||||||| || |||||||||||||| | || || || || |||||||| Sbjct: 478 tcctcgcatgcccatgtttccacctggtgttcctggagttggacagcaactgttctatgg 537 Query: 1501 ccaaccacctccagcttttgttaacccacagcctggatatggtttccagcaacatatgat 1560 || || |||||||| ||| | ||| |||||||||| | || |||||||| | | | || Sbjct: 538 tcagccccctccagcgtttatcaacacacagcctggtttcggcttccagcagcctcttat 597 Query: 1561 tcctggaatgagacctggtgttgctccgatgccaaattttgtcatgccaatggtccagca 1620 ||||| ||||| || |||| | ||| ||||| || ||| ||||||| ||||| ||||| Sbjct: 598 gcctgggatgaggccaggtgcaggtccaatgccgaactttatcatgcctatggttcagca 657 Query: 1621 aggtcaacaaccacaacgcccatctgggaggcgtgcaggtgctggtggaatgcagcagcc 1680 ||| ||||| || || || || |||| |||||||| |||||||||||||||||||| || Sbjct: 658 aggacaacagccgcagcgtccggctggtaggcgtgctggtgctggtggaatgcagcaacc 717 Query: 1681 aatgccaatgggtcaccagcagatg 1705 |||||||||||||| || |||||| Sbjct: 718 catgccaatgggtcagcaacagatg 742 Score = 123 bits (62), Expect = 3e-24 Identities = 173/210 (82%) Strand = Plus / Plus Query: 1858 tggagcattggcatctgcacttgccaactctccgccggagcagcaacgactgatgcttgg 1917 |||||||||||| ||||||| |||||| | | || || |||||| | |||||||||| Sbjct: 895 tggagcattggctactgcactggccaacgcagcccctgatcagcaaaggatgatgcttgg 954 Query: 1918 tgaaagcttgtatccacttgttgatcagctggagcatgatcaggctgccaaggttaccgg 1977 ||| | ||||||||| ||||||||||||||||||||||| |||||||| ||||| || || Sbjct: 955 tgagaacttgtatcctcttgttgatcagctggagcatgagcaggctgcgaaggtgactgg 1014 Query: 1978 tatgcttttggagatggaccaaactgaggttcttcatctaatcgagtcacctgatgcttt 2037 ||||| ||||||||||||| |||||||| || || || ||||||| || || ||| | Sbjct: 1015 catgctgctggagatggaccagactgaggtgctgcacctgctcgagtctccagaggctct 1074 Query: 2038 gaagtctaaggtcgctgaagctatggaggt 2067 ||| | ||||| |||||||| |||||||| Sbjct: 1075 caaggccaaggttgctgaagccatggaggt 1104
>dbj|AK058314.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A04, full insert sequence Length = 1208 Score = 204 bits (103), Expect = 1e-48 Identities = 443/555 (79%), Gaps = 6/555 (1%) Strand = Plus / Plus Query: 1154 ttggatggtagtgttgatgacgatgagaagttaaaagaactttttgccgaatttggcact 1213 ||||||| |||||||||||| ||| ||||| | || |||||||| || | ||||||| Sbjct: 1 ttggatgatagtgttgatgatgat---aagttgagggagctttttgctgagtatggcact 57 Query: 1214 ataacttcttgcaaggttatgcgggattcaaatggggtcaacaaaggatctggttttgtt 1273 || ||||| |||||||| ||||||||||||||||| |||| || ||| ||||| |||||| Sbjct: 58 attacttcctgcaaggtgatgcgggattcaaatggtgtcagcagaggttctggatttgtt 117 Query: 1274 gcatttaaatcttctgaagatgctacacgggctcttgtggcaatgaatggtaaaatggtt 1333 || ||||||||| ||||||||||| | || ||||||| | |||||| | || |||||| Sbjct: 118 gcgtttaaatctgctgaagatgcttcccgagctcttgccgaaatgaacagcaagatggtt 177 Query: 1334 ggcagtaagcctctttacgtagcacttgcacaacgaaaggaagaaagaagagccaggctg 1393 ||||| || || || ||||| || |||||||| || |||||||| || | ||| |||||| Sbjct: 178 ggcagcaaaccgctctacgttgcgcttgcacagcgcaaggaagacaggaaagcaaggctg 237 Query: 1394 caggcgcagttttcgcaaatgcgtcctgt---gatgccacctccagttgctccacgcatg 1450 ||||| || ||||| ||| || | ||||| | | ||| |||||| ||| |||||| Sbjct: 238 caggcacaattttcacaactgaggcctgtcccacttgctccttcagttggtcctcgcatg 297 Query: 1451 cccatgtacccccctggtgttcctggtatgggccaacagctattctatggccaaccacct 1510 ||||||| || |||||||||||||| | || || || || |||||||| || || ||| Sbjct: 298 cccatgtttccacctggtgttcctggagttggacagcaactgttctatggtcagccccct 357 Query: 1511 ccagcttttgttaacccacagcctggatatggtttccagcaacatatgattcctggaatg 1570 ||||| ||| | ||| |||||||||| | || |||||||| | | | || ||||| ||| Sbjct: 358 ccagcgtttatcaacacacagcctggtttcggcttccagcagcctcttatgcctgggatg 417 Query: 1571 agacctggtgttgctccgatgccaaattttgtcatgccaatggtccagcaaggtcaacaa 1630 || || |||| | ||| ||||| || ||| ||||||| ||||| |||||||| ||||| Sbjct: 418 aggccaggtgcaggtccaatgccgaactttatcatgcctatggttcagcaaggacaacag 477 Query: 1631 ccacaacgcccatctgggaggcgtgcaggtgctggtggaatgcagcagccaatgccaatg 1690 || || || || |||| |||||||| |||||||||||||||||||| || ||||||||| Sbjct: 478 ccgcagcgtccggctggtaggcgtgctggtgctggtggaatgcagcaacccatgccaatg 537 Query: 1691 ggtcaccagcagatg 1705 ||||| || |||||| Sbjct: 538 ggtcagcaacagatg 552 Score = 131 bits (66), Expect = 1e-26 Identities = 174/210 (82%) Strand = Plus / Plus Query: 1858 tggagcattggcatctgcacttgccaactctccgccggagcagcaacgactgatgcttgg 1917 |||||||||||| ||||||| |||||| | | || || |||||| || |||||||||| Sbjct: 705 tggagcattggctactgcactggccaacgcagcccctgatcagcaaagaatgatgcttgg 764 Query: 1918 tgaaagcttgtatccacttgttgatcagctggagcatgatcaggctgccaaggttaccgg 1977 ||| | ||||||||| ||||||||||||||||||||||| |||||||| ||||| || || Sbjct: 765 tgagaacttgtatcctcttgttgatcagctggagcatgagcaggctgcgaaggtgactgg 824 Query: 1978 tatgcttttggagatggaccaaactgaggttcttcatctaatcgagtcacctgatgcttt 2037 ||||| ||||||||||||| |||||||| || || || ||||||| || || ||| | Sbjct: 825 catgctgctggagatggaccagactgaggtgctgcacctgctcgagtctccagaggctct 884 Query: 2038 gaagtctaaggtcgctgaagctatggaggt 2067 ||| | ||||| |||||||| |||||||| Sbjct: 885 caaggccaaggttgctgaagccatggaggt 914
>gb|AY103559.1| Zea mays PCO112591 mRNA sequence Length = 1361 Score = 161 bits (81), Expect = 1e-35 Identities = 207/249 (83%) Strand = Plus / Minus Query: 316 gagcgtgcaagacgcgcagctctttgacgtcttcagccaggtcggctcggtggtgtctgt 375 |||||| || ||||| |||||||| ||||||||||||||||||||| || || || || Sbjct: 249 gagcgttcaggacgcacagctcttcgacgtcttcagccaggtcggcggcgtcgtctccgt 190 Query: 376 gcgcgtgtgccgggacgtcaacaccaggatgtccctaggctacgcgtacgtcaacttcag 435 |||||| ||| | ||| ||||| || | | ||| || |||||||| |||||||||| || Sbjct: 189 gcgcgtctgcagagacatcaactcccgcaagtcgctcggctacgcctacgtcaactacaa 130 Query: 436 cagccctgccgatgctgcaagggcattggaaatgctaaacttcactcctgttaatgggaa 495 || | || ||| |||||| ||||| | ||| |||| |||||||||||| | ||||| || Sbjct: 129 caacactagcgacgctgcacgggcacttgaactgcttaacttcactcctatcaatggaaa 70 Query: 496 gcctatcaggataatgtattctaaccgtgaccccagctcacgtaaaagtggtgctgcaaa 555 |||||||||||| |||||||||||||||||||||||||| || ||||| ||||| | ||| Sbjct: 69 gcctatcaggatcatgtattctaaccgtgaccccagctcgcgcaaaagcggtgcaggaaa 10 Query: 556 tatatttat 564 ||||||||| Sbjct: 9 tatatttat 1
>gb|AF153689.1|AF153689 Oryza sativa poly(A)-binding protein gene, partial cds Length = 552 Score = 155 bits (78), Expect = 9e-34 Identities = 421/534 (78%), Gaps = 6/534 (1%) Strand = Plus / Plus Query: 1005 tgaatggcaagaaatttgatgataaggaattatatgttggtagagctcagaagaagtctg 1064 ||||||||||||| |||||||||||||||| |||||||| || || || ||||| || | Sbjct: 19 tgaatggcaagaagtttgatgataaggaatggtatgttggaagggcacaaaagaaatcgg 78 Query: 1065 aaagggagatgcagctgaaagaaagtttcgagaaaagcaataaagagacagccgacagga 1124 ||| |||||| | ||||||| | || ||||| | | | |||| |||| || | | Sbjct: 79 gaagagagatggaattgaaagagaaatttgagaagaaccttcaagaagcagcagataagt 138 Query: 1125 atcaaggcactaacttgtatttgaaaaacttggatggtagtgttgatgacgatgagaagt 1184 ||||| ||||||| |||| |||| |||||||||| |||||||||||| ||| |||| Sbjct: 139 atcaaaacactaacctgtacctgaagaacttggatgatagtgttgatgatgat---aagt 195 Query: 1185 taaaagaactttttgccgaatttggcactataacttcttgcaaggttatgcgggattcaa 1244 | | || |||||||| || | ||||||||| ||||| |||||||| ||||||||||||| Sbjct: 196 tgagggagctttttgctgagtatggcactattacttcctgcaaggtgatgcgggattcaa 255 Query: 1245 atggggtcaacaaaggatctggttttgttgcatttaaatcttctgaagatgctacacggg 1304 |||| |||| || ||| ||||| |||||||| ||||||||| ||||||||||| | || | Sbjct: 256 atggtgtcagcagaggttctggatttgttgcgtttaaatctgctgaagatgcttcccgag 315 Query: 1305 ctcttgtggcaatgaatggtaaaatggttggcagtaagcctctttacgtagcacttgcac 1364 |||||| | |||||| | || ||||||||||| || || || ||||| || ||||||| Sbjct: 316 ctcttgccgaaatgaacagcaagatggttggcagcaaaccgctctacgttgcgcttgcac 375 Query: 1365 aacgaaaggaagaaagaagagccaggctgcaggcgcagttttcgcaaatgcgtcctgt-- 1422 | || |||||||| || | ||| ||||||||||| || ||||| ||| || | ||||| Sbjct: 376 agcgcaaggaagacaggaaagcaaggctgcaggcacaattttcacaactgaggcctgtcc 435 Query: 1423 -gatgccacctccagttgctccacgcatgcccatgtacccccctggtgttcctggtatgg 1481 | | ||| |||||| ||| ||||||||||||| || |||||||||||||| | | Sbjct: 436 cacttgctccttcagttggtcctcgcatgcccatgtttccacctggtgttcctggagttg 495 Query: 1482 gccaacagctattctatggccaaccacctccagcttttgttaacccacagcctg 1535 | || || || |||||||| || || |||||||| ||| | ||| ||||||||| Sbjct: 496 gacagcaactgttctatggtcagccccctccagcgtttatcaacacacagcctg 549
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 151 bits (76), Expect = 1e-32 Identities = 193/232 (83%) Strand = Plus / Minus Query: 567 agaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaa 626 |||| ||||| ||||| ||||| |||||||| | ||||| || || | || ||||||| Sbjct: 1163168 agaaccttgataagtcgatagacaacaaagctttgtatgatactttctgtgtgtttggaa 1163109 Query: 627 acattctttcatgcaaagttgctacagaaatgtctggagaatccaagggttatggttttg 686 ||||||||||||| |||||||| ||||| ||||||||||| ||||| ||||| |||| Sbjct: 1163108 acattctttcatgtaaagttgcaacagatgcttctggagaatcgaagggctatggctttg 1163049 Query: 687 ttcagtatgagcaggacgaatcagcacaaaatgctattaatgagctcaatgggatgcttt 746 |||||||||||| ||| || |||| ||| ||||||| || | |||||||| |||||| Sbjct: 1163048 ttcagtatgagcgggatgaggcagctcaagctgctattgataaactcaatggcatgctta 1162989 Query: 747 tgaatgacaaaaaggtttatgttgggccttttgttcgtaaacaggaaaggga 798 |||||||||||||||| |||||||||||||| ||||||| ||||| ||||| Sbjct: 1162988 tgaatgacaaaaaggtgtatgttgggcctttcattcgtaagcaggagaggga 1162937 Score = 117 bits (59), Expect = 2e-22 Identities = 134/159 (84%) Strand = Plus / Minus Query: 1909 gatgcttggtgaaagcttgtatccacttgttgatcagctggagcatgatcaggctgccaa 1968 |||||||||||| | ||||||||| ||||||||||||||||||||||| |||||||| || Sbjct: 1160212 gatgcttggtgagaacttgtatcctcttgttgatcagctggagcatgagcaggctgcgaa 1160153 Query: 1969 ggttaccggtatgcttttggagatggaccaaactgaggttcttcatctaatcgagtcacc 2028 ||| || || ||||| ||||||||||||| |||||||| || || || ||||||| || Sbjct: 1160152 ggtgactggcatgctgctggagatggaccagactgaggtgctgcacctgctcgagtctcc 1160093 Query: 2029 tgatgctttgaagtctaaggtcgctgaagctatggaggt 2067 || ||| | ||| | ||||| |||||||| |||||||| Sbjct: 1160092 agaggctctcaaggccaaggttgctgaagccatggaggt 1160054 Score = 115 bits (58), Expect = 7e-22 Identities = 130/154 (84%) Strand = Plus / Minus Query: 296 tacgtgggggatctggacgtgagcgtgcaagacgcgcagctctttgacgtcttcagccag 355 ||||| |||||||| ||||| |||||||| |||||||||||||| ||||||||| ||| Sbjct: 1164458 tacgtcggggatctcgacgtcagcgtgcaggacgcgcagctcttcgacgtcttcgcgcag 1164399 Query: 356 gtcggctcggtggtgtctgtgcgcgtgtgccgggacgtcaacaccaggatgtccctaggc 415 |||||| || || || |||||||| ||| ||||||||||||| ||| ||| || ||| Sbjct: 1164398 gtcggcggcgtcgtctccgtgcgcgtctgcagggacgtcaacacgcggaggtcgctcggc 1164339 Query: 416 tacgcgtacgtcaacttcagcagccctgccgatg 449 ||||| |||||||||| ||||||||| ||||||| Sbjct: 1164338 tacgcctacgtcaactacagcagccccgccgatg 1164305 Score = 103 bits (52), Expect = 3e-18 Identities = 94/108 (87%) Strand = Plus / Minus Query: 461 ttggaaatgctaaacttcactcctgttaatgggaagcctatcaggataatgtattctaac 520 ||||||||||| |||||||||||| | ||||| || ||||||||||| |||||||||||| Sbjct: 1163352 ttggaaatgctcaacttcactcctatcaatggaaaacctatcaggatcatgtattctaac 1163293 Query: 521 cgtgaccccagctcacgtaaaagtggtgctgcaaatatatttatcaag 568 ||||||||||||| || || ||||| | |||||||| ||||||||| Sbjct: 1163292 cgtgaccccagcttgcgcaagagtggcacagcaaatatttttatcaag 1163245 Score = 89.7 bits (45), Expect = 4e-14 Identities = 323/415 (77%), Gaps = 3/415 (0%) Strand = Plus / Minus Query: 817 caagttcaataatgtgtatgtaaagaatctatcagaatctaccactgaagataatctgaa 876 ||||||||||||||| ||||||||||| || || || ||| ||||||||| | |||| Sbjct: 1162918 caagttcaataatgtctatgtaaagaacctgtctgagaatactactgaagatgacttgaa 1162859 Query: 877 agaattgtttggtaattttggacctataactagtgttattgtagtgcgagcagatgatgg 936 ||| | ||||| || |||||| | || ||||| | | ||||| |||| | | ||||| Sbjct: 1162858 ggaaatctttggaaaatttggaaccatcactagcgctgttgtaatgcgtgagggagatgg 1162799 Query: 937 taaatccagatgctttggatttgtgaactttgaaaatccggatgatgctgtacatgctgt 996 | ||||| || ||||||||||| |||||||||| ||| |||||||||| || ||||| Sbjct: 1162798 aagatccaagtgttttggatttgttaactttgaaagtccagatgatgctgctcaggctgt 1162739 Query: 997 tgaggatttgaatggcaagaaatttgatgataaggaattatatgttggtagagctcagaa 1056 | || ||||||||||||| |||||||||||||||| |||||||| || || || || Sbjct: 1162738 ccaagagctgaatggcaagaagtttgatgataaggaatggtatgttggaagggcacaaaa 1162679 Query: 1057 gaagtctgaaagggagatgcagctgaaagaaagtttcgagaaaagcaataaagagacagc 1116 ||| || ||||| |||||| | ||||||| | || ||||| | | | |||| |||| Sbjct: 1162678 gaaatcggaaagagagatggaattgaaagagaaatttgagaagaaccttcaagaagcagc 1162619 Query: 1117 cgacaggaatcaaggcactaacttgtatttgaaaaacttggatggtagtgttgatgacga 1176 || | | ||||| ||||||| |||| |||| |||||||||| |||||||||| || Sbjct: 1162618 agataagtatcaaaacactaacctgtacctgaagaacttggatgatagtgttgat---ga 1162562 Query: 1177 tgagaagttaaaagaactttttgccgaatttggcactataacttcttgcaaggtt 1231 ||| ||||| | || |||||||| || | ||||||||| ||||| ||||||||| Sbjct: 1162561 tgataagttgagggagctttttgctgagtatggcactattacttcctgcaaggtt 1162507 Score = 85.7 bits (43), Expect = 7e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 1589 atgccaaattttgtcatgccaatggtccagcaaggtcaacaaccacaacgcccatctggg 1648 ||||| || ||| ||||||| ||||| |||||||| ||||| || || || || |||| Sbjct: 1160744 atgccgaactttatcatgcctatggttcagcaaggacaacagccgcagcgtccggctggt 1160685 Query: 1649 aggcgtgcaggtgctggtggaatgcagcagccaatgccaatgggtca 1695 |||||||| |||||||||||||||||||| || |||||||||||||| Sbjct: 1160684 aggcgtgctggtgctggtggaatgcagcaacccatgccaatgggtca 1160638 Score = 77.8 bits (39), Expect = 2e-10 Identities = 63/71 (88%) Strand = Plus / Minus Query: 1227 aggttatgcgggattcaaatggggtcaacaaaggatctggttttgttgcatttaaatctt 1286 |||| ||||||||||||||||| |||| || ||| ||||| |||||||| ||||||||| Sbjct: 1162433 aggtgatgcgggattcaaatggtgtcagcagaggttctggatttgttgcgtttaaatctg 1162374 Query: 1287 ctgaagatgct 1297 ||||||||||| Sbjct: 1162373 ctgaagatgct 1162363 Score = 46.1 bits (23), Expect = 0.57 Identities = 38/43 (88%) Strand = Plus / Minus Query: 1434 cagttgctccacgcatgcccatgtacccccctggtgttcctgg 1476 |||||| ||| ||||||||||||| || |||||||||||||| Sbjct: 1161829 cagttggtcctcgcatgcccatgtttccacctggtgttcctgg 1161787 Score = 44.1 bits (22), Expect = 2.3 Identities = 58/70 (82%) Strand = Plus / Minus Query: 1328 atggttggcagtaagcctctttacgtagcacttgcacaacgaaaggaagaaagaagagcc 1387 ||||||||||| || || || ||||| || |||||||| || |||||||| || | ||| Sbjct: 1162252 atggttggcagcaaaccgctctacgttgcgcttgcacagcgcaaggaagacaggaaagca 1162193 Query: 1388 aggctgcagg 1397 |||||||||| Sbjct: 1162192 aggctgcagg 1162183
>dbj|AP005569.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1310_F05 Length = 107916 Score = 151 bits (76), Expect = 1e-32 Identities = 193/232 (83%) Strand = Plus / Minus Query: 567 agaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaa 626 |||| ||||| ||||| ||||| |||||||| | ||||| || || | || ||||||| Sbjct: 51762 agaaccttgataagtcgatagacaacaaagctttgtatgatactttctgtgtgtttggaa 51703 Query: 627 acattctttcatgcaaagttgctacagaaatgtctggagaatccaagggttatggttttg 686 ||||||||||||| |||||||| ||||| ||||||||||| ||||| ||||| |||| Sbjct: 51702 acattctttcatgtaaagttgcaacagatgcttctggagaatcgaagggctatggctttg 51643 Query: 687 ttcagtatgagcaggacgaatcagcacaaaatgctattaatgagctcaatgggatgcttt 746 |||||||||||| ||| || |||| ||| ||||||| || | |||||||| |||||| Sbjct: 51642 ttcagtatgagcgggatgaggcagctcaagctgctattgataaactcaatggcatgctta 51583 Query: 747 tgaatgacaaaaaggtttatgttgggccttttgttcgtaaacaggaaaggga 798 |||||||||||||||| |||||||||||||| ||||||| ||||| ||||| Sbjct: 51582 tgaatgacaaaaaggtgtatgttgggcctttcattcgtaagcaggagaggga 51531 Score = 117 bits (59), Expect = 2e-22 Identities = 134/159 (84%) Strand = Plus / Minus Query: 1909 gatgcttggtgaaagcttgtatccacttgttgatcagctggagcatgatcaggctgccaa 1968 |||||||||||| | ||||||||| ||||||||||||||||||||||| |||||||| || Sbjct: 48806 gatgcttggtgagaacttgtatcctcttgttgatcagctggagcatgagcaggctgcgaa 48747 Query: 1969 ggttaccggtatgcttttggagatggaccaaactgaggttcttcatctaatcgagtcacc 2028 ||| || || ||||| ||||||||||||| |||||||| || || || ||||||| || Sbjct: 48746 ggtgactggcatgctgctggagatggaccagactgaggtgctgcacctgctcgagtctcc 48687 Query: 2029 tgatgctttgaagtctaaggtcgctgaagctatggaggt 2067 || ||| | ||| | ||||| |||||||| |||||||| Sbjct: 48686 agaggctctcaaggccaaggttgctgaagccatggaggt 48648 Score = 115 bits (58), Expect = 7e-22 Identities = 130/154 (84%) Strand = Plus / Minus Query: 296 tacgtgggggatctggacgtgagcgtgcaagacgcgcagctctttgacgtcttcagccag 355 ||||| |||||||| ||||| |||||||| |||||||||||||| ||||||||| ||| Sbjct: 53052 tacgtcggggatctcgacgtcagcgtgcaggacgcgcagctcttcgacgtcttcgcgcag 52993 Query: 356 gtcggctcggtggtgtctgtgcgcgtgtgccgggacgtcaacaccaggatgtccctaggc 415 |||||| || || || |||||||| ||| ||||||||||||| ||| ||| || ||| Sbjct: 52992 gtcggcggcgtcgtctccgtgcgcgtctgcagggacgtcaacacgcggaggtcgctcggc 52933 Query: 416 tacgcgtacgtcaacttcagcagccctgccgatg 449 ||||| |||||||||| ||||||||| ||||||| Sbjct: 52932 tacgcctacgtcaactacagcagccccgccgatg 52899 Score = 103 bits (52), Expect = 3e-18 Identities = 94/108 (87%) Strand = Plus / Minus Query: 461 ttggaaatgctaaacttcactcctgttaatgggaagcctatcaggataatgtattctaac 520 ||||||||||| |||||||||||| | ||||| || ||||||||||| |||||||||||| Sbjct: 51946 ttggaaatgctcaacttcactcctatcaatggaaaacctatcaggatcatgtattctaac 51887 Query: 521 cgtgaccccagctcacgtaaaagtggtgctgcaaatatatttatcaag 568 ||||||||||||| || || ||||| | |||||||| ||||||||| Sbjct: 51886 cgtgaccccagcttgcgcaagagtggcacagcaaatatttttatcaag 51839 Score = 89.7 bits (45), Expect = 4e-14 Identities = 323/415 (77%), Gaps = 3/415 (0%) Strand = Plus / Minus Query: 817 caagttcaataatgtgtatgtaaagaatctatcagaatctaccactgaagataatctgaa 876 ||||||||||||||| ||||||||||| || || || ||| ||||||||| | |||| Sbjct: 51512 caagttcaataatgtctatgtaaagaacctgtctgagaatactactgaagatgacttgaa 51453 Query: 877 agaattgtttggtaattttggacctataactagtgttattgtagtgcgagcagatgatgg 936 ||| | ||||| || |||||| | || ||||| | | ||||| |||| | | ||||| Sbjct: 51452 ggaaatctttggaaaatttggaaccatcactagcgctgttgtaatgcgtgagggagatgg 51393 Query: 937 taaatccagatgctttggatttgtgaactttgaaaatccggatgatgctgtacatgctgt 996 | ||||| || ||||||||||| |||||||||| ||| |||||||||| || ||||| Sbjct: 51392 aagatccaagtgttttggatttgttaactttgaaagtccagatgatgctgctcaggctgt 51333 Query: 997 tgaggatttgaatggcaagaaatttgatgataaggaattatatgttggtagagctcagaa 1056 | || ||||||||||||| |||||||||||||||| |||||||| || || || || Sbjct: 51332 ccaagagctgaatggcaagaagtttgatgataaggaatggtatgttggaagggcacaaaa 51273 Query: 1057 gaagtctgaaagggagatgcagctgaaagaaagtttcgagaaaagcaataaagagacagc 1116 ||| || ||||| |||||| | ||||||| | || ||||| | | | |||| |||| Sbjct: 51272 gaaatcggaaagagagatggaattgaaagagaaatttgagaagaaccttcaagaagcagc 51213 Query: 1117 cgacaggaatcaaggcactaacttgtatttgaaaaacttggatggtagtgttgatgacga 1176 || | | ||||| ||||||| |||| |||| |||||||||| |||||||||| || Sbjct: 51212 agataagtatcaaaacactaacctgtacctgaagaacttggatgatagtgttgat---ga 51156 Query: 1177 tgagaagttaaaagaactttttgccgaatttggcactataacttcttgcaaggtt 1231 ||| ||||| | || |||||||| || | ||||||||| ||||| ||||||||| Sbjct: 51155 tgataagttgagggagctttttgctgagtatggcactattacttcctgcaaggtt 51101 Score = 85.7 bits (43), Expect = 7e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 1589 atgccaaattttgtcatgccaatggtccagcaaggtcaacaaccacaacgcccatctggg 1648 ||||| || ||| ||||||| ||||| |||||||| ||||| || || || || |||| Sbjct: 49338 atgccgaactttatcatgcctatggttcagcaaggacaacagccgcagcgtccggctggt 49279 Query: 1649 aggcgtgcaggtgctggtggaatgcagcagccaatgccaatgggtca 1695 |||||||| |||||||||||||||||||| || |||||||||||||| Sbjct: 49278 aggcgtgctggtgctggtggaatgcagcaacccatgccaatgggtca 49232 Score = 77.8 bits (39), Expect = 2e-10 Identities = 63/71 (88%) Strand = Plus / Minus Query: 1227 aggttatgcgggattcaaatggggtcaacaaaggatctggttttgttgcatttaaatctt 1286 |||| ||||||||||||||||| |||| || ||| ||||| |||||||| ||||||||| Sbjct: 51027 aggtgatgcgggattcaaatggtgtcagcagaggttctggatttgttgcgtttaaatctg 50968 Query: 1287 ctgaagatgct 1297 ||||||||||| Sbjct: 50967 ctgaagatgct 50957 Score = 46.1 bits (23), Expect = 0.57 Identities = 38/43 (88%) Strand = Plus / Minus Query: 1434 cagttgctccacgcatgcccatgtacccccctggtgttcctgg 1476 |||||| ||| ||||||||||||| || |||||||||||||| Sbjct: 50423 cagttggtcctcgcatgcccatgtttccacctggtgttcctgg 50381 Score = 44.1 bits (22), Expect = 2.3 Identities = 58/70 (82%) Strand = Plus / Minus Query: 1328 atggttggcagtaagcctctttacgtagcacttgcacaacgaaaggaagaaagaagagcc 1387 ||||||||||| || || || ||||| || |||||||| || |||||||| || | ||| Sbjct: 50846 atggttggcagcaaaccgctctacgttgcgcttgcacagcgcaaggaagacaggaaagca 50787 Query: 1388 aggctgcagg 1397 |||||||||| Sbjct: 50786 aggctgcagg 50777
>gb|BT018220.1| Zea mays clone EL01N0561C03.c mRNA sequence Length = 790 Score = 129 bits (65), Expect = 5e-26 Identities = 149/177 (84%) Strand = Plus / Plus Query: 1898 cagcaacgactgatgcttggtgaaagcttgtatccacttgttgatcagctggagcatgat 1957 |||||| |||||||||||||||| | | ||||||| |||||||| |||||||||| ||| Sbjct: 321 cagcaaagactgatgcttggtgagaccctgtatcctcttgttgaacagctggagcgtgag 380 Query: 1958 caggctgccaaggttaccggtatgcttttggagatggaccaaactgaggttcttcatcta 2017 |||||||||||||| | || ||||||| |||||||||| || ||||||||||| || Sbjct: 381 caggctgccaaggtctctggcatgctttaaaagatggaccagacggaggttcttcacctg 440 Query: 2018 atcgagtcacctgatgctttgaagtctaaggtcgctgaagctatggaggttctccgc 2074 | ||||| || |||||| | ||| ||||||| |||||||| ||||||||||||||| Sbjct: 441 ctggagtcgccagatgctctcaaggctaaggttgctgaagccatggaggttctccgc 497 Score = 63.9 bits (32), Expect = 2e-06 Identities = 71/84 (84%) Strand = Plus / Plus Query: 1610 atggtccagcaaggtcaacaaccacaacgcccatctgggaggcgtgcaggtgctggtgga 1669 ||||| ||||| || || ||||| ||||| || |||| |||||||| || |||||||| Sbjct: 33 atggttcagcagggacagcaaccgcaacgtcctgctggtaggcgtgctgggtctggtgga 92 Query: 1670 atgcagcagccaatgccaatgggt 1693 ||||||||||| |||||||||||| Sbjct: 93 atgcagcagcccatgccaatgggt 116
>gb|BT024028.1| Zea mays clone EL01N0420H06 mRNA sequence Length = 1123 Score = 115 bits (58), Expect = 7e-22 Identities = 142/170 (83%) Strand = Plus / Plus Query: 1905 gactgatgcttggtgaaagcttgtatccacttgttgatcagctggagcatgatcaggctg 1964 |||| ||||||||||| | | ||||||| |||||||| |||||||| | ||| ||||||| Sbjct: 613 gacttatgcttggtgagaacctgtatcctcttgttgaacagctggaacgtgagcaggctg 672 Query: 1965 ccaaggttaccggtatgcttttggagatggaccaaactgaggttcttcatctaatcgagt 2024 ||||||| || || ||||||||||||||||| || || ||||||||||| || | |||| Sbjct: 673 ccaaggtcactggcatgcttttggagatggatcagacggaggttcttcacctgctggagt 732 Query: 2025 cacctgatgctttgaagtctaaggtcgctgaagctatggaggttctccgc 2074 | || |||||| |||| | ||||| |||||||| |||||||| |||||| Sbjct: 733 cgccagatgctctgaaagccaaggttgctgaagccatggaggtcctccgc 782 Score = 69.9 bits (35), Expect = 4e-08 Identities = 198/251 (78%), Gaps = 11/251 (4%) Strand = Plus / Plus Query: 1445 cgcatgcccatgtacccccctggtgttcctggtatgggccaacagctattctatggccaa 1504 ||||||||||||| || |||||||| ||||| | || || ||||| |||||||| || Sbjct: 163 cgcatgcccatgtttccacctggtgtccctggagttggtcagcagctgttctatggtcag 222 Query: 1505 ccacctccagcttttgttaacccacagcctggatatggtttccagcaacatatgattcct 1564 ||||| ||||| || | ||||| ||| |||||| || ||||||||||| | |||| ||| Sbjct: 223 ccaccaccagccttcatcaaccctcaggctggatttgctttccagcaacgtctgatgcct 282 Query: 1565 ggaatgagacctggtgttgctccgatgcc--aaattttgtcatgccaatggtccagcaag 1622 || ||||| ||||| || ||| ||||| || |||| | ||||| ||||| ||||||| Sbjct: 283 ggtatgaggcctgg---tggtccaatgcccgaacttttatgatgcctatggttcagcaag 339 Query: 1623 gtcaacaaccacaacgcccatctgggaggcgtgcaggtgctggtggaatgcagcagccaa 1682 | || |||||||| || || |||| || |||| ||||||||||||||||||| | Sbjct: 340 gacagcaaccacagcgtcctgctggtagacgtg------ctggtggaatgcagcagccca 393 Query: 1683 tgccaatgggt 1693 ||||||||||| Sbjct: 394 tgccaatgggt 404
>emb|AM111311.1| Plantago major partial mRNA for polyA-binding protein (pabp1 gene) Length = 1132 Score = 97.6 bits (49), Expect = 2e-16 Identities = 121/145 (83%) Strand = Plus / Plus Query: 1924 cttgtatccacttgttgatcagctggagcatgatcaggctgccaaggttaccggtatgct 1983 |||||| || |||||||| |||||||||||||| || |||||||| ||||| || ||||| Sbjct: 718 cttgtaccctcttgttgaccagctggagcatgagcatgctgccaaagttactggcatgct 777 Query: 1984 tttggagatggaccaaactgaggttcttcatctaatcgagtcacctgatgctttgaagtc 2043 | | |||||||| ||||| || ||||| ||| | | |||||||| ||||||||||| || Sbjct: 778 tcttgagatggatcaaacagaagttctgcatttgctggagtcaccggatgctttgaaatc 837 Query: 2044 taaggtcgctgaagctatggaggtt 2068 ||| ||| |||||| ||||||||| Sbjct: 838 taaagtcaatgaagccatggaggtt 862
>emb|AJ505151.1|MIN505151 Mangifera indica partial mRNA for putative poly(A)-binding protein (pabp gene), cv. Alphonso Length = 392 Score = 91.7 bits (46), Expect = 1e-14 Identities = 85/98 (86%) Strand = Plus / Plus Query: 1316 atgaatggtaaaatggttggcagtaagcctctttacgtagcacttgcacaacgaaaggaa 1375 |||||||| |||||||||| || |||||||| | || |||||||||||||| |||||| Sbjct: 221 atgaatggaaaaatggttgttagcaagcctctatttgttgcacttgcacaacgcaaggaa 280 Query: 1376 gaaagaagagccaggctgcaggcgcagttttcgcaaat 1413 || |||||||| ||||||||||| |||||||| ||||| Sbjct: 281 gatagaagagcaaggctgcaggctcagttttctcaaat 318
>gb|AF240679.1|AF240679 Cucumis sativus poly(A)-binding protein mRNA, complete cds Length = 2603 Score = 91.7 bits (46), Expect = 1e-14 Identities = 166/206 (80%) Strand = Plus / Plus Query: 446 gatgctgcaagggcattggaaatgctaaacttcactcctgttaatgggaagcctatcagg 505 |||||| |||||||||| || ||||||||||||| ||| | ||||| || ||||| || Sbjct: 641 gatgcttcaagggcattagatgtgctaaacttcacccctttgaatggaaatcctattaga 700 Query: 506 ataatgtattctaaccgtgaccccagctcacgtaaaagtggtgctgcaaatatatttatc 565 | ||||||||| | |||||||| ||| || |||||||| ||| ||| ||||||||| Sbjct: 701 gtcatgtattctcatcgtgaccctagcgtgcggaaaagtgggtctggaaacatatttatc 760 Query: 566 aagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgcctttgga 625 ||||| | |||||| |||| ||| |||||||| | |||| || || ||||| |||||| Sbjct: 761 aagaacttggacaaggcaattgatcacaaagcgttgcatgatactttctctgcatttgga 820 Query: 626 aacattctttcatgcaaagttgctac 651 | |||||| |||||||| |||||||| Sbjct: 821 agcattctatcatgcaaggttgctac 846 Score = 81.8 bits (41), Expect = 1e-11 Identities = 116/141 (82%) Strand = Plus / Plus Query: 1928 tatccacttgttgatcagctggagcatgatcaggctgccaaggttaccggtatgcttttg 1987 |||||||||||||| ||||| |||| |||| | || |||||||| || || ||||| ||| Sbjct: 2126 tatccacttgttgaacagctagagcctgataatgccgccaaggtaacaggaatgctattg 2185 Query: 1988 gagatggaccaaactgaggttcttcatctaatcgagtcacctgatgctttgaagtctaag 2047 || |||||||||||||||||||| ||| | | ||||| || || ||| |||| ||||| Sbjct: 2186 gaaatggaccaaactgaggttctacatttgcttgagtcgcccgaagctctgaaagctaag 2245 Query: 2048 gtcgctgaagctatggaggtt 2068 || || ||||| ||||||||| Sbjct: 2246 gtggcggaagcaatggaggtt 2266 Score = 52.0 bits (26), Expect = 0.009 Identities = 125/158 (79%) Strand = Plus / Plus Query: 1258 aggatctggttttgttgcatttaaatcttctgaagatgctacacgggctcttgtggcaat 1317 ||||||||| ||||||||||| ||| ||||||| ||| || | ||||||| | || Sbjct: 1450 aggatctggctttgttgcattctcttctcctgaagaggctgcaagagctcttgctgagat 1509 Query: 1318 gaatggtaaaatggttggcagtaagcctctttacgtagcacttgcacaacgaaaggaaga 1377 |||||| | |||| ||| || || |||||||| || ||||||||||| | |||||||| Sbjct: 1510 gaatggaagaatgattgtgagcaaacctctttatgttgcacttgcacagaggaaggaaga 1569 Query: 1378 aagaagagccaggctgcaggcgcagttttcgcaaatgc 1415 |||| ||| ||| |||| || |||||||| ||||||| Sbjct: 1570 tagaatagctaggttgcaagcacagttttcccaaatgc 1607 Score = 42.1 bits (21), Expect = 8.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 946 atgctttggatttgtgaactttgaaaatccggatgatgctg 986 ||||||||| ||||| || ||||| ||| |||||||||||| Sbjct: 1141 atgctttggctttgtaaattttgagaatgcggatgatgctg 1181 Score = 42.1 bits (21), Expect = 8.9 Identities = 54/65 (83%) Strand = Plus / Plus Query: 1562 cctggaatgagacctggtgttgctccgatgccaaattttgtcatgccaatggtccagcaa 1621 ||||||||||| ||||||| | ||| ||||||||||| | |||||||||| ||||| Sbjct: 1760 cctggaatgaggcctggtggaggtcccatgccaaatttctttgtgccaatggttcagcag 1819 Query: 1622 ggtca 1626 ||||| Sbjct: 1820 ggtca 1824
>gb|AC189325.1| Brassica rapa subsp. pekinensis clone KBrB036M17, complete sequence Length = 151101 Score = 87.7 bits (44), Expect = 2e-13 Identities = 104/124 (83%) Strand = Plus / Plus Query: 950 tttggatttgtgaactttgaaaatccggatgatgctgtacatgctgttgaggatttgaat 1009 ||||| ||||| ||||| ||||| | |||||||||| | ||||| ||| ||||||| Sbjct: 30489 tttggttttgtcaacttcgaaaacgctgatgatgctgccaaggctgtggagtctttgaat 30548 Query: 1010 ggcaagaaatttgatgataaggaattatatgttggtagagctcagaagaagtctgaaagg 1069 || |||| |||||||||||||| | ||||||||||||||||||||||||||||| ||| Sbjct: 30549 gggaagatgtttgatgataaggagtggtatgttggtagagctcagaagaagtctgagagg 30608 Query: 1070 gaga 1073 |||| Sbjct: 30609 gaga 30612 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Plus Query: 1526 ccacagcctggatatggtttccagcaacatatgattcctggaatgagacctggtg 1580 ||||||||||| ||||| |||||||| || | ||||||||||||||||||||| Sbjct: 32063 ccacagcctgggtatgggttccagcagcagcttgttcctggaatgagacctggtg 32117
>ref|NM_127899.2| Arabidopsis thaliana PAB4; RNA binding / translation initiation factor (PAB4) mRNA, complete cds Length = 2371 Score = 87.7 bits (44), Expect = 2e-13 Identities = 116/140 (82%) Strand = Plus / Plus Query: 932 gatggtaaatccagatgctttggatttgtgaactttgaaaatccggatgatgctgtacat 991 ||||| |||||||| || ||||||||||| |||||||| ||||| || ||||| | | | Sbjct: 937 gatgggaaatccaggtgttttggatttgtcaactttgagaatcctgaagatgcagctcgt 996 Query: 992 gctgttgaggatttgaatggcaagaaatttgatgataaggaattatatgttggtagagct 1051 |||||||| | | | ||||| ||||| |||||||||||||| | ||||| |||| |||| Sbjct: 997 gctgttgaagctctcaatggaaagaagtttgatgataaggagtggtatgtgggtaaagct 1056 Query: 1052 cagaagaagtctgaaaggga 1071 |||||||| ||||| ||||| Sbjct: 1057 cagaagaaatctgagaggga 1076 Score = 56.0 bits (28), Expect = 6e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 1196 tttgccgaatttggcactataacttcttgcaaggttatgcggga 1239 |||||||||||||| || || || |||||||||||||||||||| Sbjct: 1198 tttgccgaatttggtacaatcacctcttgcaaggttatgcggga 1241 Score = 44.1 bits (22), Expect = 2.3 Identities = 43/50 (86%) Strand = Plus / Plus Query: 746 ttgaatgacaaaaaggtttatgttgggccttttgttcgtaaacaggaaag 795 |||||||||||| || ||| |||||| |||||| ||||||| ||||||| Sbjct: 751 ttgaatgacaaacagatttttgttggaccttttcttcgtaaggaggaaag 800 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1315 aatgaatggtaaaatggttgg 1335 ||||||||||||||||||||| Sbjct: 1317 aatgaatggtaaaatggttgg 1337
>gb|AY079389.1| Arabidopsis thaliana putative poly(A) binding protein (At2g23350) mRNA, complete cds Length = 2020 Score = 87.7 bits (44), Expect = 2e-13 Identities = 116/140 (82%) Strand = Plus / Plus Query: 932 gatggtaaatccagatgctttggatttgtgaactttgaaaatccggatgatgctgtacat 991 ||||| |||||||| || ||||||||||| |||||||| ||||| || ||||| | | | Sbjct: 781 gatgggaaatccaggtgttttggatttgtcaactttgagaatcctgaagatgcagctcgt 840 Query: 992 gctgttgaggatttgaatggcaagaaatttgatgataaggaattatatgttggtagagct 1051 |||||||| | | | ||||| ||||| |||||||||||||| | ||||| |||| |||| Sbjct: 841 gctgttgaagctctcaatggaaagaagtttgatgataaggagtggtatgtgggtaaagct 900 Query: 1052 cagaagaagtctgaaaggga 1071 |||||||| ||||| ||||| Sbjct: 901 cagaagaaatctgagaggga 920 Score = 56.0 bits (28), Expect = 6e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 1196 tttgccgaatttggcactataacttcttgcaaggttatgcggga 1239 |||||||||||||| || || || |||||||||||||||||||| Sbjct: 1042 tttgccgaatttggtacaatcacctcttgcaaggttatgcggga 1085 Score = 44.1 bits (22), Expect = 2.3 Identities = 43/50 (86%) Strand = Plus / Plus Query: 746 ttgaatgacaaaaaggtttatgttgggccttttgttcgtaaacaggaaag 795 |||||||||||| || ||| |||||| |||||| ||||||| ||||||| Sbjct: 595 ttgaatgacaaacagatttttgttggaccttttcttcgtaaggaggaaag 644 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1315 aatgaatggtaaaatggttgg 1335 ||||||||||||||||||||| Sbjct: 1161 aatgaatggtaaaatggttgg 1181
>gb|AY050859.1| Arabidopsis thaliana putative poly(A) binding protein (At2g23350) mRNA, complete cds Length = 2337 Score = 87.7 bits (44), Expect = 2e-13 Identities = 116/140 (82%) Strand = Plus / Plus Query: 932 gatggtaaatccagatgctttggatttgtgaactttgaaaatccggatgatgctgtacat 991 ||||| |||||||| || ||||||||||| |||||||| ||||| || ||||| | | | Sbjct: 935 gatgggaaatccaggtgttttggatttgtcaactttgagaatcctgaagatgcagctcgt 994 Query: 992 gctgttgaggatttgaatggcaagaaatttgatgataaggaattatatgttggtagagct 1051 |||||||| | | | ||||| ||||| |||||||||||||| | ||||| |||| |||| Sbjct: 995 gctgttgaagctctcaatggaaagaagtttgatgataaggagtggtatgtgggtaaagct 1054 Query: 1052 cagaagaagtctgaaaggga 1071 |||||||| ||||| ||||| Sbjct: 1055 cagaagaaatctgagaggga 1074 Score = 56.0 bits (28), Expect = 6e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 1196 tttgccgaatttggcactataacttcttgcaaggttatgcggga 1239 |||||||||||||| || || || |||||||||||||||||||| Sbjct: 1196 tttgccgaatttggtacaatcacctcttgcaaggttatgcggga 1239 Score = 44.1 bits (22), Expect = 2.3 Identities = 43/50 (86%) Strand = Plus / Plus Query: 746 ttgaatgacaaaaaggtttatgttgggccttttgttcgtaaacaggaaag 795 |||||||||||| || ||| |||||| |||||| ||||||| ||||||| Sbjct: 749 ttgaatgacaaacagatttttgttggaccttttcttcgtaaggaggaaag 798 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1315 aatgaatggtaaaatggttgg 1335 ||||||||||||||||||||| Sbjct: 1315 aatgaatggtaaaatggttgg 1335
>gb|AF360217.1| Arabidopsis thaliana putative poly(A) binding protein (At2g23350) mRNA, complete cds Length = 2385 Score = 87.7 bits (44), Expect = 2e-13 Identities = 116/140 (82%) Strand = Plus / Plus Query: 932 gatggtaaatccagatgctttggatttgtgaactttgaaaatccggatgatgctgtacat 991 ||||| |||||||| || ||||||||||| |||||||| ||||| || ||||| | | | Sbjct: 934 gatgggaaatccaggtgttttggatttgtcaactttgagaatcctgaagatgcagctcgt 993 Query: 992 gctgttgaggatttgaatggcaagaaatttgatgataaggaattatatgttggtagagct 1051 |||||||| | | | ||||| ||||| |||||||||||||| | ||||| |||| |||| Sbjct: 994 gctgttgaagctctcaatggaaagaagtttgatgataaggagtggtatgtgggtaaagct 1053 Query: 1052 cagaagaagtctgaaaggga 1071 |||||||| ||||| ||||| Sbjct: 1054 cagaagaaatctgagaggga 1073 Score = 56.0 bits (28), Expect = 6e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 1196 tttgccgaatttggcactataacttcttgcaaggttatgcggga 1239 |||||||||||||| || || || |||||||||||||||||||| Sbjct: 1195 tttgccgaatttggtacaatcacctcttgcaaggttatgcggga 1238 Score = 44.1 bits (22), Expect = 2.3 Identities = 43/50 (86%) Strand = Plus / Plus Query: 746 ttgaatgacaaaaaggtttatgttgggccttttgttcgtaaacaggaaag 795 |||||||||||| || ||| |||||| |||||| ||||||| ||||||| Sbjct: 748 ttgaatgacaaacagatttttgttggaccttttcttcgtaaggaggaaag 797 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1315 aatgaatggtaaaatggttgg 1335 ||||||||||||||||||||| Sbjct: 1314 aatgaatggtaaaatggttgg 1334
>gb|AC002391.3| Arabidopsis thaliana chromosome 2 clone T20D16 map CIC06C07, complete sequence Length = 108881 Score = 87.7 bits (44), Expect = 2e-13 Identities = 116/140 (82%) Strand = Plus / Minus Query: 932 gatggtaaatccagatgctttggatttgtgaactttgaaaatccggatgatgctgtacat 991 ||||| |||||||| || ||||||||||| |||||||| ||||| || ||||| | | | Sbjct: 7152 gatgggaaatccaggtgttttggatttgtcaactttgagaatcctgaagatgcagctcgt 7093 Query: 992 gctgttgaggatttgaatggcaagaaatttgatgataaggaattatatgttggtagagct 1051 |||||||| | | | ||||| ||||| |||||||||||||| | ||||| |||| |||| Sbjct: 7092 gctgttgaagctctcaatggaaagaagtttgatgataaggagtggtatgtgggtaaagct 7033 Query: 1052 cagaagaagtctgaaaggga 1071 |||||||| ||||| ||||| Sbjct: 7032 cagaagaaatctgagaggga 7013 Score = 44.1 bits (22), Expect = 2.3 Identities = 43/50 (86%) Strand = Plus / Minus Query: 746 ttgaatgacaaaaaggtttatgttgggccttttgttcgtaaacaggaaag 795 |||||||||||| || ||| |||||| |||||| ||||||| ||||||| Sbjct: 7338 ttgaatgacaaacagatttttgttggaccttttcttcgtaaggaggaaag 7289 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1315 aatgaatggtaaaatggttgg 1335 ||||||||||||||||||||| Sbjct: 6582 aatgaatggtaaaatggttgg 6562
>gb|AF190657.1|AF190657 Nicotiana tabacum clone 7 poly(A)-binding protein (PABP) mRNA, partial cds Length = 1651 Score = 85.7 bits (43), Expect = 7e-13 Identities = 127/155 (81%) Strand = Plus / Plus Query: 1916 ggtgaaagcttgtatccacttgttgatcagctggagcatgatcaggctgccaaggttacc 1975 |||||||| ||||| ||||||||||||||||||||||| || || || || |||||||| Sbjct: 1210 ggtgaaagtttgtacccacttgttgatcagctggagcacgagcatgcagcaaaggttaca 1269 Query: 1976 ggtatgcttttggagatggaccaaactgaggttcttcatctaatcgagtcacctgatgct 2035 || |||||| | || ||||| || ||||||||| | ||||| | || ||||| || ||| Sbjct: 1270 ggcatgcttcttgaaatggatcagactgaggttttgcatctgcttgaatcaccagaggct 1329 Query: 2036 ttgaagtctaaggtcgctgaagctatggaggttct 2070 ||||| |||| || ||||| |||||||| ||||| Sbjct: 1330 ctgaaggctaaagttgctgaggctatggaagttct 1364 Score = 52.0 bits (26), Expect = 0.009 Identities = 56/66 (84%) Strand = Plus / Plus Query: 1175 gatgagaagttaaaagaactttttgccgaatttggcactataacttcttgcaaggttatg 1234 ||||||||| | || ||||||||| | || || || || |||||||| |||||||||||| Sbjct: 463 gatgagaagctcaaggaacttttttcagagttcggtacaataacttcatgcaaggttatg 522 Query: 1235 cgggat 1240 |||||| Sbjct: 523 cgggat 528 Score = 44.1 bits (22), Expect = 2.3 Identities = 52/62 (83%) Strand = Plus / Plus Query: 1007 aatggcaagaaatttgatgataaggaattatatgttggtagagctcagaagaagtctgaa 1066 ||||| || |||||||||||||| || | |||||||| | ||| |||||||| |||||| Sbjct: 298 aatggaaaaaaatttgatgataaagagtggtatgttgggaaagcacagaagaaatctgaa 357 Query: 1067 ag 1068 || Sbjct: 358 ag 359
>emb|AJ505583.1|MIN505583 Mangifera indica partial mRNA for putative poly(A) binding protein (pabp gene), cv. Totapuri Length = 392 Score = 83.8 bits (42), Expect = 3e-12 Identities = 84/98 (85%) Strand = Plus / Plus Query: 1316 atgaatggtaaaatggttggcagtaagcctctttacgtagcacttgcacaacgaaaggaa 1375 |||||||| |||||||||| | |||||||| || || |||||||||||||| |||||| Sbjct: 221 atgaatggaaaaatggttgttggcaagcctctatatgttgcacttgcacaacgcaaggaa 280 Query: 1376 gaaagaagagccaggctgcaggcgcagttttcgcaaat 1413 | |||||||| ||||||||||| |||||||| ||||| Sbjct: 281 gttagaagagcaaggctgcaggctcagttttctcaaat 318
>gb|DQ019455.1| Lilium longiflorum clone LP61 poly(A)-binding protein-like mRNA, partial sequence Length = 827 Score = 81.8 bits (41), Expect = 1e-11 Identities = 217/275 (78%), Gaps = 3/275 (1%) Strand = Plus / Plus Query: 1359 ttgcacaacgaaaggaagaaagaagagccaggctgcaggcgcagttttcgcaaatgcgtc 1418 ||||||| || || |||||| ||||||| ||||| |||||||| ||||| || ||||||| Sbjct: 269 ttgcacagcgtaaagaagaacgaagagcaaggctacaggcgcaattttctcagatgcgtc 328 Query: 1419 ctgt---gatgccacctccagttgctccacgcatgcccatgtacccccctggtgttcctg 1475 | || |||||| |||| ||||| || || |||| ||||| || ||||| ||| | Sbjct: 329 cagttgcgatgccttctcctgttgcgcctcgtgtgccaatgtatccttctggtactccgg 388 Query: 1476 gtatgggccaacagctattctatggccaaccacctccagcttttgttaacccacagcctg 1535 | || || || |||||||| ||||||||| ||||||| ||| || | || ||||||| Sbjct: 389 gaattggtcagcagctattttatggccaagcacctcctgctattataccaccccagcctg 448 Query: 1536 gatatggtttccagcaacatatgattcctggaatgagacctggtgttgctccgatgccaa 1595 ||| ||| | |||||| || || ||||||||||||| ||||| | |||||| ||||||| Sbjct: 449 gatttggctaccagcagcagctggttcctggaatgaggcctggagctgctcccatgccaa 508 Query: 1596 attttgtcatgccaatggtccagcaaggtcaacaa 1630 | ||| || | ||| | |||||||||||||||||| Sbjct: 509 actttttcgttccatttgtccagcaaggtcaacaa 543
>ref|NM_001059783.1| Oryza sativa (japonica cultivar-group) Os04g0504800 (Os04g0504800) mRNA, complete cds Length = 2545 Score = 77.8 bits (39), Expect = 2e-10 Identities = 132/163 (80%) Strand = Plus / Plus Query: 1913 cttggtgaaagcttgtatccacttgttgatcagctggagcatgatcaggctgccaaggtt 1972 |||||||||||| |||||||||| ||||| | ||||| || | || || |||||||| Sbjct: 2014 cttggtgaaagcctgtatccactggttgagcttctggaacagaaccatgcggccaaggtc 2073 Query: 1973 accggtatgcttttggagatggaccaaactgaggttcttcatctaatcgagtcacctgat 2032 ||||| |||||| |||||||||| || || ||||| || ||||| ||||||| || || Sbjct: 2074 accggaatgcttctggagatggatcagacggaggtcctgcatctgctcgagtctccagag 2133 Query: 2033 gctttgaagtctaaggtcgctgaagctatggaggttctccgca 2075 ||| ||||||| ||||| ||||| || ||||| || ||||||| Sbjct: 2134 gctctgaagtccaaggttgctgaggcgatggatgtcctccgca 2176 Score = 67.9 bits (34), Expect = 2e-07 Identities = 82/98 (83%) Strand = Plus / Plus Query: 977 gatgatgctgtacatgctgttgaggatttgaatggcaagaaatttgatgataaggaatta 1036 |||||||||| | |||||||||||| | ||||| |||||| || |||| || |||| Sbjct: 1081 gatgatgctgctcgtgctgttgaggaacttaatggaaagaaaattaatgacaaagaatgg 1140 Query: 1037 tatgttggtagagctcagaagaagtctgaaagggagat 1074 |||||||| ||||||||||||||||| ||||| ||||| Sbjct: 1141 tatgttggaagagctcagaagaagtcagaaagagagat 1178 Score = 60.0 bits (30), Expect = 4e-05 Identities = 189/242 (78%) Strand = Plus / Plus Query: 413 ggctacgcgtacgtcaacttcagcagccctgccgatgctgcaagggcattggaaatgcta 472 |||||||| ||||||||||||| || ||| | ||||||||||| ||| |||| |||| Sbjct: 517 ggctacgcctacgtcaacttcaacaaccccgtggatgctgcaagagcactggagctgctc 576 Query: 473 aacttcactcctgttaatgggaagcctatcaggataatgtattctaaccgtgaccccagc 532 ||||| ||||| | ||||| || || || || ||||||| || ||||||||||| ||| Sbjct: 577 aactttgctcctctgaatggcaaacccattcgggtaatgtactcaaaccgtgacccaagc 636 Query: 533 tcacgtaaaagtggtgctgcaaatatatttatcaagaatcttgacaagtcaatagataac 592 || | |||||| |||| || || || |||||||| |||||||| ||||||| || Sbjct: 637 agtcgcagaagtggatctgctaacattttcatcaagaaccttgacaaagcaatagaccac 696 Query: 593 aaagcgctatatgacacattttctgcctttggaaacattctttcatgcaaagttgctaca 652 ||| | || |||| || |||||||| ||||| |||||||| || || || ||||| ||| Sbjct: 697 aaaactctccatgataccttttctgcatttggtaacattctctcctgtaaggttgccaca 756 Query: 653 ga 654 || Sbjct: 757 ga 758 Score = 52.0 bits (26), Expect = 0.009 Identities = 29/30 (96%) Strand = Plus / Plus Query: 1525 cccacagcctggatatggtttccagcaaca 1554 |||||||||||||| ||||||||||||||| Sbjct: 1626 cccacagcctggatttggtttccagcaaca 1655 Score = 46.1 bits (23), Expect = 0.57 Identities = 53/63 (84%) Strand = Plus / Plus Query: 1217 acttcttgcaaggttatgcgggattcaaatggggtcaacaaaggatctggttttgttgca 1276 ||||| |||||| | ||||| ||| ||||||| || | |||||| ||||| ||||||||| Sbjct: 1318 acttcatgcaagataatgcgtgatgcaaatggtgttagcaaagggtctggatttgttgca 1377 Query: 1277 ttt 1279 ||| Sbjct: 1378 ttt 1380
>gb|BT009480.1| Triticum aestivum clone wr1.pk0038.g11:fis, full insert mRNA sequence Length = 844 Score = 77.8 bits (39), Expect = 2e-10 Identities = 132/163 (80%) Strand = Plus / Minus Query: 1913 cttggtgaaagcttgtatccacttgttgatcagctggagcatgatcaggctgccaaggtt 1972 ||||| |||||| | |||||||||||||| |||| || || | || ||||||||||| Sbjct: 470 cttggcgaaagcctctatccacttgttgagaagcttgaacaccaacaagctgccaaggtg 411 Query: 1973 accggtatgcttttggagatggaccaaactgaggttcttcatctaatcgagtcacctgat 2032 ||||| |||||| ||||||||||||| || ||||| || ||||| ||||||| || || Sbjct: 410 accggcatgcttctggagatggaccagacggaggtgctgcatctgctcgagtctccagag 351 Query: 2033 gctttgaagtctaaggtcgctgaagctatggaggttctccgca 2075 ||| | ||||| ||||| || || || ||||| |||||||||| Sbjct: 350 gctctcaagtccaaggttgccgaggcgatggatgttctccgca 308
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 77.8 bits (39), Expect = 2e-10 Identities = 132/163 (80%) Strand = Plus / Minus Query: 1913 cttggtgaaagcttgtatccacttgttgatcagctggagcatgatcaggctgccaaggtt 1972 |||||||||||| |||||||||| ||||| | ||||| || | || || |||||||| Sbjct: 25170590 cttggtgaaagcctgtatccactggttgagcttctggaacagaaccatgcggccaaggtc 25170531 Query: 1973 accggtatgcttttggagatggaccaaactgaggttcttcatctaatcgagtcacctgat 2032 ||||| |||||| |||||||||| || || ||||| || ||||| ||||||| || || Sbjct: 25170530 accggaatgcttctggagatggatcagacggaggtcctgcatctgctcgagtctccagag 25170471 Query: 2033 gctttgaagtctaaggtcgctgaagctatggaggttctccgca 2075 ||| ||||||| ||||| ||||| || ||||| || ||||||| Sbjct: 25170470 gctctgaagtccaaggttgctgaggcgatggatgtcctccgca 25170428 Score = 67.9 bits (34), Expect = 2e-07 Identities = 82/98 (83%) Strand = Plus / Minus Query: 977 gatgatgctgtacatgctgttgaggatttgaatggcaagaaatttgatgataaggaatta 1036 |||||||||| | |||||||||||| | ||||| |||||| || |||| || |||| Sbjct: 25173700 gatgatgctgctcgtgctgttgaggaacttaatggaaagaaaattaatgacaaagaatgg 25173641 Query: 1037 tatgttggtagagctcagaagaagtctgaaagggagat 1074 |||||||| ||||||||||||||||| ||||| ||||| Sbjct: 25173640 tatgttggaagagctcagaagaagtcagaaagagagat 25173603 Score = 42.1 bits (21), Expect = 8.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1530 agcctggatatggtttccagcaaca 1554 ||||||||| ||||||||||||||| Sbjct: 25171758 agcctggatttggtttccagcaaca 25171734
>emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0116K07, complete sequence Length = 130779 Score = 77.8 bits (39), Expect = 2e-10 Identities = 132/163 (80%) Strand = Plus / Minus Query: 1913 cttggtgaaagcttgtatccacttgttgatcagctggagcatgatcaggctgccaaggtt 1972 |||||||||||| |||||||||| ||||| | ||||| || | || || |||||||| Sbjct: 52257 cttggtgaaagcctgtatccactggttgagcttctggaacagaaccatgcggccaaggtc 52198 Query: 1973 accggtatgcttttggagatggaccaaactgaggttcttcatctaatcgagtcacctgat 2032 ||||| |||||| |||||||||| || || ||||| || ||||| ||||||| || || Sbjct: 52197 accggaatgcttctggagatggatcagacggaggtcctgcatctgctcgagtctccagag 52138 Query: 2033 gctttgaagtctaaggtcgctgaagctatggaggttctccgca 2075 ||| ||||||| ||||| ||||| || ||||| || ||||||| Sbjct: 52137 gctctgaagtccaaggttgctgaggcgatggatgtcctccgca 52095 Score = 67.9 bits (34), Expect = 2e-07 Identities = 82/98 (83%) Strand = Plus / Minus Query: 977 gatgatgctgtacatgctgttgaggatttgaatggcaagaaatttgatgataaggaatta 1036 |||||||||| | |||||||||||| | ||||| |||||| || |||| || |||| Sbjct: 55367 gatgatgctgctcgtgctgttgaggaacttaatggaaagaaaattaatgacaaagaatgg 55308 Query: 1037 tatgttggtagagctcagaagaagtctgaaagggagat 1074 |||||||| ||||||||||||||||| ||||| ||||| Sbjct: 55307 tatgttggaagagctcagaagaagtcagaaagagagat 55270 Score = 42.1 bits (21), Expect = 8.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1530 agcctggatatggtttccagcaaca 1554 ||||||||| ||||||||||||||| Sbjct: 53425 agcctggatttggtttccagcaaca 53401
>dbj|AK105555.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-B03, full insert sequence Length = 1647 Score = 77.8 bits (39), Expect = 2e-10 Identities = 132/163 (80%) Strand = Plus / Plus Query: 1913 cttggtgaaagcttgtatccacttgttgatcagctggagcatgatcaggctgccaaggtt 1972 |||||||||||| |||||||||| ||||| | ||||| || | || || |||||||| Sbjct: 582 cttggtgaaagcctgtatccactggttgagcttctggaacagaaccatgcggccaaggtc 641 Query: 1973 accggtatgcttttggagatggaccaaactgaggttcttcatctaatcgagtcacctgat 2032 ||||| |||||| |||||||||| || || ||||| || ||||| ||||||| || || Sbjct: 642 accggaatgcttctggagatggatcagacggaggtcctgcatctgctcgagtctccagag 701 Query: 2033 gctttgaagtctaaggtcgctgaagctatggaggttctccgca 2075 ||| ||||||| ||||| ||||| || ||||| || ||||||| Sbjct: 702 gctctgaagtccaaggttgctgaggcgatggatgtcctccgca 744 Score = 52.0 bits (26), Expect = 0.009 Identities = 29/30 (96%) Strand = Plus / Plus Query: 1525 cccacagcctggatatggtttccagcaaca 1554 |||||||||||||| ||||||||||||||| Sbjct: 194 cccacagcctggatttggtttccagcaaca 223
>dbj|AK104208.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-B11, full insert sequence Length = 1050 Score = 77.8 bits (39), Expect = 2e-10 Identities = 132/163 (80%) Strand = Plus / Plus Query: 1913 cttggtgaaagcttgtatccacttgttgatcagctggagcatgatcaggctgccaaggtt 1972 |||||||||||| |||||||||| ||||| | ||||| || | || || |||||||| Sbjct: 532 cttggtgaaagcctgtatccactggttgagcttctggaacagaaccatgcggccaaggtc 591 Query: 1973 accggtatgcttttggagatggaccaaactgaggttcttcatctaatcgagtcacctgat 2032 ||||| |||||| |||||||||| || || ||||| || ||||| ||||||| || || Sbjct: 592 accggaatgcttctggagatggatcagacggaggtcctgcatctgctcgagtctccagag 651 Query: 2033 gctttgaagtctaaggtcgctgaagctatggaggttctccgca 2075 ||| ||||||| ||||| ||||| || ||||| || ||||||| Sbjct: 652 gctctgaagtccaaggttgctgaggcgatggatgtcctccgca 694 Score = 52.0 bits (26), Expect = 0.009 Identities = 29/30 (96%) Strand = Plus / Plus Query: 1525 cccacagcctggatatggtttccagcaaca 1554 |||||||||||||| ||||||||||||||| Sbjct: 144 cccacagcctggatttggtttccagcaaca 173
>dbj|AK067210.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096J03, full insert sequence Length = 2549 Score = 77.8 bits (39), Expect = 2e-10 Identities = 132/163 (80%) Strand = Plus / Plus Query: 1913 cttggtgaaagcttgtatccacttgttgatcagctggagcatgatcaggctgccaaggtt 1972 |||||||||||| |||||||||| ||||| | ||||| || | || || |||||||| Sbjct: 2018 cttggtgaaagcctgtatccactggttgagcttctggaacagaaccatgcggccaaggtc 2077 Query: 1973 accggtatgcttttggagatggaccaaactgaggttcttcatctaatcgagtcacctgat 2032 ||||| |||||| |||||||||| || || ||||| || ||||| ||||||| || || Sbjct: 2078 accggaatgcttctggagatggatcagacggaggtcctgcatctgctcgagtctccagag 2137 Query: 2033 gctttgaagtctaaggtcgctgaagctatggaggttctccgca 2075 ||| ||||||| ||||| ||||| || ||||| || ||||||| Sbjct: 2138 gctctgaagtccaaggttgctgaggcgatggatgtcctccgca 2180 Score = 67.9 bits (34), Expect = 2e-07 Identities = 82/98 (83%) Strand = Plus / Plus Query: 977 gatgatgctgtacatgctgttgaggatttgaatggcaagaaatttgatgataaggaatta 1036 |||||||||| | |||||||||||| | ||||| |||||| || |||| || |||| Sbjct: 1085 gatgatgctgctcgtgctgttgaggaacttaatggaaagaaaattaatgacaaagaatgg 1144 Query: 1037 tatgttggtagagctcagaagaagtctgaaagggagat 1074 |||||||| ||||||||||||||||| ||||| ||||| Sbjct: 1145 tatgttggaagagctcagaagaagtcagaaagagagat 1182 Score = 60.0 bits (30), Expect = 4e-05 Identities = 189/242 (78%) Strand = Plus / Plus Query: 413 ggctacgcgtacgtcaacttcagcagccctgccgatgctgcaagggcattggaaatgcta 472 |||||||| ||||||||||||| || ||| | ||||||||||| ||| |||| |||| Sbjct: 521 ggctacgcctacgtcaacttcaacaaccccgtggatgctgcaagagcactggagctgctc 580 Query: 473 aacttcactcctgttaatgggaagcctatcaggataatgtattctaaccgtgaccccagc 532 ||||| ||||| | ||||| || || || || ||||||| || ||||||||||| ||| Sbjct: 581 aactttgctcctctgaatggcaaacccattcgggtaatgtactcaaaccgtgacccaagc 640 Query: 533 tcacgtaaaagtggtgctgcaaatatatttatcaagaatcttgacaagtcaatagataac 592 || | |||||| |||| || || || |||||||| |||||||| ||||||| || Sbjct: 641 agtcgcagaagtggatctgctaacattttcatcaagaaccttgacaaagcaatagaccac 700 Query: 593 aaagcgctatatgacacattttctgcctttggaaacattctttcatgcaaagttgctaca 652 ||| | || |||| || |||||||| ||||| |||||||| || || || ||||| ||| Sbjct: 701 aaaactctccatgataccttttctgcatttggtaacattctctcctgtaaggttgccaca 760 Query: 653 ga 654 || Sbjct: 761 ga 762 Score = 52.0 bits (26), Expect = 0.009 Identities = 29/30 (96%) Strand = Plus / Plus Query: 1525 cccacagcctggatatggtttccagcaaca 1554 |||||||||||||| ||||||||||||||| Sbjct: 1630 cccacagcctggatttggtttccagcaaca 1659 Score = 46.1 bits (23), Expect = 0.57 Identities = 53/63 (84%) Strand = Plus / Plus Query: 1217 acttcttgcaaggttatgcgggattcaaatggggtcaacaaaggatctggttttgttgca 1276 ||||| |||||| | ||||| ||| ||||||| || | |||||| ||||| ||||||||| Sbjct: 1322 acttcatgcaagataatgcgtgatgcaaatggtgttagcaaagggtctggatttgttgca 1381 Query: 1277 ttt 1279 ||| Sbjct: 1382 ttt 1384
>emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014K14, complete sequence Length = 150187 Score = 77.8 bits (39), Expect = 2e-10 Identities = 132/163 (80%) Strand = Plus / Minus Query: 1913 cttggtgaaagcttgtatccacttgttgatcagctggagcatgatcaggctgccaaggtt 1972 |||||||||||| |||||||||| ||||| | ||||| || | || || |||||||| Sbjct: 118017 cttggtgaaagcctgtatccactggttgagcttctggaacagaaccatgcggccaaggtc 117958 Query: 1973 accggtatgcttttggagatggaccaaactgaggttcttcatctaatcgagtcacctgat 2032 ||||| |||||| |||||||||| || || ||||| || ||||| ||||||| || || Sbjct: 117957 accggaatgcttctggagatggatcagacggaggtcctgcatctgctcgagtctccagag 117898 Query: 2033 gctttgaagtctaaggtcgctgaagctatggaggttctccgca 2075 ||| ||||||| ||||| ||||| || ||||| || ||||||| Sbjct: 117897 gctctgaagtccaaggttgctgaggcgatggatgtcctccgca 117855 Score = 67.9 bits (34), Expect = 2e-07 Identities = 82/98 (83%) Strand = Plus / Minus Query: 977 gatgatgctgtacatgctgttgaggatttgaatggcaagaaatttgatgataaggaatta 1036 |||||||||| | |||||||||||| | ||||| |||||| || |||| || |||| Sbjct: 121127 gatgatgctgctcgtgctgttgaggaacttaatggaaagaaaattaatgacaaagaatgg 121068 Query: 1037 tatgttggtagagctcagaagaagtctgaaagggagat 1074 |||||||| ||||||||||||||||| ||||| ||||| Sbjct: 121067 tatgttggaagagctcagaagaagtcagaaagagagat 121030 Score = 42.1 bits (21), Expect = 8.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1530 agcctggatatggtttccagcaaca 1554 ||||||||| ||||||||||||||| Sbjct: 119185 agcctggatttggtttccagcaaca 119161
>gb|AF190656.1|AF190656 Nicotiana tabacum clone 1 poly(A)-binding protein (PABP1) mRNA, partial cds Length = 1231 Score = 75.8 bits (38), Expect = 6e-10 Identities = 157/196 (80%), Gaps = 3/196 (1%) Strand = Plus / Plus Query: 1316 atgaatggtaaaatggttggcagtaagcctctttacgtagcacttgcacaacgaaaggaa 1375 |||||||| || ||||||| || || ||||| || || || ||||| ||||| |||||| Sbjct: 150 atgaatggaaagatggttgttagcaaacctctgtatgttgcccttgcgcaacgcaaggaa 209 Query: 1376 gaaagaagagccaggctgcaggcgcagttttcgcaaatgcgtcc---tgtgatgccacct 1432 || |||||||| ||| | ||||| |||||||| || |||||||| || ||| || || Sbjct: 210 gagagaagagcaaggttacaggctcagttttctcagatgcgtccaattgcaatggcatct 269 Query: 1433 ccagttgctccacgcatgcccatgtacccccctggtgttcctggtatgggccaacagcta 1492 |||||||||| || ||||| |||||||| ||||| | ||||||| | || ||||| || Sbjct: 270 tcagttgctcctcgaatgccgatgtaccctcctggcggtcctggtctaggtcaacaaata 329 Query: 1493 ttctatggccaaccac 1508 ||||||||||| |||| Sbjct: 330 ttctatggccagccac 345 Score = 56.0 bits (28), Expect = 6e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 1960 ggctgccaaggttaccggtatgcttttggagatggaccaaactgaggt 2007 |||||||||||| || || ||||| |||||||||||||| |||||||| Sbjct: 803 ggctgccaaggtgactggcatgctcttggagatggaccagactgaggt 850 Score = 48.1 bits (24), Expect = 0.14 Identities = 60/72 (83%) Strand = Plus / Plus Query: 1207 tggcactataacttcttgcaaggttatgcgggattcaaatggggtcaacaaaggatctgg 1266 |||||| || ||||| |||||||||||| | ||| | | |||||| | ||||||||| || Sbjct: 41 tggcacaatcacttcatgcaaggttatgagagatcctagtggggtaagcaaaggatcagg 100 Query: 1267 ttttgttgcatt 1278 ||||||||||| Sbjct: 101 atttgttgcatt 112
>gb|AF190655.1|AF190655 Nicotiana tabacum poly(A)-binding protein (PABP) mRNA, complete cds Length = 2364 Score = 75.8 bits (38), Expect = 6e-10 Identities = 157/196 (80%), Gaps = 3/196 (1%) Strand = Plus / Plus Query: 1316 atgaatggtaaaatggttggcagtaagcctctttacgtagcacttgcacaacgaaaggaa 1375 |||||||| || ||||||| || || ||||| || || || ||||| ||||| |||||| Sbjct: 1245 atgaatggaaagatggttgttagcaaacctctgtatgttgcccttgcgcaacgcaaggaa 1304 Query: 1376 gaaagaagagccaggctgcaggcgcagttttcgcaaatgcgtcc---tgtgatgccacct 1432 || |||||||| ||| | ||||| |||||||| || |||||||| || ||| || || Sbjct: 1305 gagagaagagcaaggttacaggctcagttttctcagatgcgtccaattgcaatggcatct 1364 Query: 1433 ccagttgctccacgcatgcccatgtacccccctggtgttcctggtatgggccaacagcta 1492 |||||||||| || ||||| |||||||| ||||| | ||||||| | || ||||| || Sbjct: 1365 tcagttgctcctcgaatgccgatgtaccctcctggcggtcctggtctaggtcaacaaata 1424 Query: 1493 ttctatggccaaccac 1508 ||||||||||| |||| Sbjct: 1425 ttctatggccagccac 1440 Score = 71.9 bits (36), Expect = 1e-08 Identities = 150/188 (79%) Strand = Plus / Plus Query: 446 gatgctgcaagggcattggaaatgctaaacttcactcctgttaatgggaagcctatcagg 505 |||||||||||||| |||||| |||| ||||| |||||| | |||| ||||| |||||| Sbjct: 378 gatgctgcaagggcgttggaagtgctgaactttactcctctccatggaaagccaatcagg 437 Query: 506 ataatgtattctaaccgtgaccccagctcacgtaaaagtggtgctgcaaatatatttatc 565 |||||||| || ||||| ||||| | ||| | |||||| || || |||||||| Sbjct: 438 ataatgtactcaaaccgagacccaactatacgaagaagtggcaatgggaacatatttatt 497 Query: 566 aagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgcctttgga 625 |||||| | |||||| |||| || ||||||| || |||| ||||||||||| |||||| Sbjct: 498 aagaatttggacaaggcaattgaccacaaagcattacatgatacattttctgcatttgga 557 Query: 626 aacattct 633 || ||||| Sbjct: 558 aatattct 565 Score = 56.0 bits (28), Expect = 6e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 1960 ggctgccaaggttaccggtatgcttttggagatggaccaaactgaggt 2007 |||||||||||| || || ||||| |||||||||||||| |||||||| Sbjct: 1898 ggctgccaaggtgactggcatgctcttggagatggaccagactgaggt 1945 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Plus Query: 932 gatggtaaatccagatgctttggatttgtgaactttgaaaatccggatgatgctg 986 ||||| |||||||| |||||||||||||| |||||||| ||| | || ||||||| Sbjct: 864 gatggaaaatccaggtgctttggatttgtcaactttgagaatgctgaagatgctg 918 Score = 48.1 bits (24), Expect = 0.14 Identities = 60/72 (83%) Strand = Plus / Plus Query: 1207 tggcactataacttcttgcaaggttatgcgggattcaaatggggtcaacaaaggatctgg 1266 |||||| || ||||| |||||||||||| | ||| | | |||||| | ||||||||| || Sbjct: 1136 tggcacaatcacttcatgcaaggttatgagagatcctagtggggtaagcaaaggatcagg 1195 Query: 1267 ttttgttgcatt 1278 ||||||||||| Sbjct: 1196 atttgttgcatt 1207
>gb|AF349964.1| Daucus carota poly(A)-binding protein mRNA, complete cds Length = 2491 Score = 73.8 bits (37), Expect = 3e-09 Identities = 79/93 (84%) Strand = Plus / Plus Query: 1949 gagcatgatcaggctgccaaggttaccggtatgcttttggagatggaccaaactgaggtt 2008 ||||||||||| || ||||| || || || |||||||| ||||||||||||||||| ||| Sbjct: 1996 gagcatgatcatgcagccaaagtcacaggcatgcttttagagatggaccaaactgaagtt 2055 Query: 2009 cttcatctaatcgagtcacctgatgctttgaag 2041 || ||| | | ||||||||||||||| ||||| Sbjct: 2056 ctgcatttgttagagtcacctgatgctctgaag 2088 Score = 52.0 bits (26), Expect = 0.009 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1589 atgccaaattttgtcatgccaatggtccagcaaggtca 1626 ||||||||||| ||||||||||||| ||||||||||| Sbjct: 1633 atgccaaatttcttcatgccaatggtacagcaaggtca 1670 Score = 48.1 bits (24), Expect = 0.14 Identities = 39/44 (88%) Strand = Plus / Plus Query: 554 aatatatttatcaagaatcttgacaagtcaatagataacaaagc 597 ||||| ||||||||||| | |||||||||||||||| |||||| Sbjct: 598 aatatttttatcaagaacttggacaagtcaatagatatcaaagc 641
>ref|NM_201296.1| Danio rerio poly(A) binding protein, cytoplasmic 4 (inducible form) (pabpc4), mRNA gb|BC053126.1| Danio rerio poly(A) binding protein, cytoplasmic 4 (inducible form), mRNA (cDNA clone MGC:63875 IMAGE:6789528), complete cds Length = 2582 Score = 73.8 bits (37), Expect = 3e-09 Identities = 64/73 (87%) Strand = Plus / Plus Query: 558 tatttatcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctg 617 |||||||||| ||||| |||||||| || || |||||||| || |||||||| || |||| Sbjct: 487 tatttatcaaaaatctggacaagtccatcgacaacaaagctctgtatgacaccttctctg 546 Query: 618 cctttggaaacat 630 ||||||||||||| Sbjct: 547 cctttggaaacat 559
>emb|CR392364.6| Zebrafish DNA sequence from clone CH211-230I4 in linkage group 17, complete sequence Length = 91506 Score = 73.8 bits (37), Expect = 3e-09 Identities = 64/73 (87%) Strand = Plus / Plus Query: 558 tatttatcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctg 617 |||||||||| ||||| |||||||| || || |||||||| || |||||||| || |||| Sbjct: 79389 tatttatcaaaaatctggacaagtccatcgacaacaaagctctgtatgacaccttctctg 79448 Query: 618 cctttggaaacat 630 ||||||||||||| Sbjct: 79449 cctttggaaacat 79461
>emb|CR956427.7| Pig DNA sequence from clone CH242-51O7 on chromosome 6, complete sequence Length = 187800 Score = 71.9 bits (36), Expect = 1e-08 Identities = 69/80 (86%) Strand = Plus / Minus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| |||||||||||||| || || ||||| || |||||||| ||| Sbjct: 6255 atcaagaacctggacaaatcaatagataacaaggcactttatgatactttttctgctttt 6196 Query: 623 ggaaacattctttcatgcaa 642 ||||||||||| || ||||| Sbjct: 6195 ggaaacattctgtcctgcaa 6176
>emb|CR956622.12| Pig DNA sequence from clone PigE-219N9 on chromosome 6, complete sequence Length = 174170 Score = 71.9 bits (36), Expect = 1e-08 Identities = 69/80 (86%) Strand = Plus / Minus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| |||||||||||||| || || ||||| || |||||||| ||| Sbjct: 115728 atcaagaacctggacaaatcaatagataacaaggcactttatgatactttttctgctttt 115669 Query: 623 ggaaacattctttcatgcaa 642 ||||||||||| || ||||| Sbjct: 115668 ggaaacattctgtcctgcaa 115649
>gb|AC148528.15| Medicago truncatula clone mth2-53h4, complete sequence Length = 141776 Score = 69.9 bits (35), Expect = 4e-08 Identities = 106/127 (83%), Gaps = 2/127 (1%) Strand = Plus / Plus Query: 947 tgctttggatttgtgaactttgaaaatccggatgatgctg-tacatgctgttgaggattt 1005 ||||||||||||||||||||||| | | | |||||||||| || | |||||||||| | | Sbjct: 448 tgctttggatttgtgaactttgagagtaccgatgatgctgctaga-gctgttgaggctct 506 Query: 1006 gaatggcaagaaatttgatgataaggaattatatgttggtagagctcagaagaagtctga 1065 ||||| || ||| ||||||| ||||||| |||||||| | |||||| || || ||||| Sbjct: 507 taatgggaaaaaaattgatgacaaggaatggtatgttggaaaagctcaaaaaaaatctga 566 Query: 1066 aagggag 1072 ||||||| Sbjct: 567 aagggag 573 Score = 60.0 bits (30), Expect = 4e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 1961 gctgccaaggttaccggtatgcttttggagatggaccaaactgaggttct 2010 |||||||| ||||| ||||||||| ||||||||||||| ||||| ||||| Sbjct: 2767 gctgccaaagttactggtatgcttctggagatggaccagactgaagttct 2816
>gb|AC136449.21| Medicago truncatula clone mth2-11k13, complete sequence Length = 112369 Score = 69.9 bits (35), Expect = 4e-08 Identities = 106/127 (83%), Gaps = 2/127 (1%) Strand = Plus / Plus Query: 947 tgctttggatttgtgaactttgaaaatccggatgatgctg-tacatgctgttgaggattt 1005 ||||||||||||||||||||||| | | | |||||||||| || | |||||||||| | | Sbjct: 57419 tgctttggatttgtgaactttgagagtaccgatgatgctgctaga-gctgttgaggctct 57477 Query: 1006 gaatggcaagaaatttgatgataaggaattatatgttggtagagctcagaagaagtctga 1065 ||||| || ||| ||||||| ||||||| |||||||| | |||||| || || ||||| Sbjct: 57478 taatgggaaaaaaattgatgacaaggaatggtatgttggaaaagctcaaaaaaaatctga 57537 Query: 1066 aagggag 1072 ||||||| Sbjct: 57538 aagggag 57544 Score = 60.0 bits (30), Expect = 4e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 1961 gctgccaaggttaccggtatgcttttggagatggaccaaactgaggttct 2010 |||||||| ||||| ||||||||| ||||||||||||| ||||| ||||| Sbjct: 59739 gctgccaaagttactggtatgcttctggagatggaccagactgaagttct 59788
>gb|AC122728.32| Medicago truncatula clone mth2-22l4, complete sequence Length = 102937 Score = 69.9 bits (35), Expect = 4e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 1560 ttcctggaatgagacctggtgttgctccgatgccaaattttgtcatgccaatggtccagc 1619 |||||||||||||||| |||| |||||| |||||||| || ||||||| ||||| |||| Sbjct: 24068 ttcctggaatgagaccaggtggtgctccaatgccaaacttcttcatgcccatggttcagc 24009 Query: 1620 aaggtcaacaa 1630 | ||||||||| Sbjct: 24008 agggtcaacaa 23998 Score = 63.9 bits (32), Expect = 2e-06 Identities = 59/68 (86%) Strand = Plus / Minus Query: 1961 gctgccaaggttaccggtatgcttttggagatggaccaaactgaggttcttcatctaatc 2020 ||||| |||||||| ||||||||||||||||||||||| ||||||| | ||||| || Sbjct: 23525 gctgcaaaggttactggtatgcttttggagatggaccagcctgaggtgttacatctgatt 23466 Query: 2021 gagtcacc 2028 |||||||| Sbjct: 23465 gagtcacc 23458
>ref|XM_852075.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein-1) (APP-1), transcript variant 6 (LOC482464), mRNA Length = 2599 Score = 69.9 bits (35), Expect = 4e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 ||||||||||| ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 692 atcaagaatctggacaaatctatagataacaaggcactttatgatactttttctgctttt 751 Query: 623 ggaaacattct 633 ||||||||||| Sbjct: 752 ggaaacattct 762
>ref|XM_851990.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein-1) (APP-1), transcript variant 4 (LOC482464), mRNA Length = 1909 Score = 69.9 bits (35), Expect = 4e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 ||||||||||| ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 692 atcaagaatctggacaaatctatagataacaaggcactttatgatactttttctgctttt 751 Query: 623 ggaaacattct 633 ||||||||||| Sbjct: 752 ggaaacattct 762
>ref|XM_851948.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein-1) (APP-1), transcript variant 3 (LOC482464), mRNA Length = 2027 Score = 69.9 bits (35), Expect = 4e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 ||||||||||| ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 307 atcaagaatctggacaaatctatagataacaaggcactttatgatactttttctgctttt 366 Query: 623 ggaaacattct 633 ||||||||||| Sbjct: 367 ggaaacattct 377
>ref|XM_851907.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein-1) (APP-1), transcript variant 2 (LOC482464), mRNA Length = 2638 Score = 69.9 bits (35), Expect = 4e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 ||||||||||| ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 692 atcaagaatctggacaaatctatagataacaaggcactttatgatactttttctgctttt 751 Query: 623 ggaaacattct 633 ||||||||||| Sbjct: 752 ggaaacattct 762
>ref|XM_852801.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein-1) (APP-1), transcript variant 23 (LOC482464), mRNA Length = 2608 Score = 69.9 bits (35), Expect = 4e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 ||||||||||| ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 692 atcaagaatctggacaaatctatagataacaaggcactttatgatactttttctgctttt 751 Query: 623 ggaaacattct 633 ||||||||||| Sbjct: 752 ggaaacattct 762
>ref|XM_852766.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein-1) (APP-1), transcript variant 22 (LOC482464), mRNA Length = 2611 Score = 69.9 bits (35), Expect = 4e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 ||||||||||| ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 692 atcaagaatctggacaaatctatagataacaaggcactttatgatactttttctgctttt 751 Query: 623 ggaaacattct 633 ||||||||||| Sbjct: 752 ggaaacattct 762
>ref|XM_852728.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein-1) (APP-1), transcript variant 21 (LOC482464), mRNA Length = 2551 Score = 69.9 bits (35), Expect = 4e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 ||||||||||| ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 692 atcaagaatctggacaaatctatagataacaaggcactttatgatactttttctgctttt 751 Query: 623 ggaaacattct 633 ||||||||||| Sbjct: 752 ggaaacattct 762
>ref|XM_852688.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein-1) (APP-1), transcript variant 20 (LOC482464), mRNA Length = 2563 Score = 69.9 bits (35), Expect = 4e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 ||||||||||| ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 692 atcaagaatctggacaaatctatagataacaaggcactttatgatactttttctgctttt 751 Query: 623 ggaaacattct 633 ||||||||||| Sbjct: 752 ggaaacattct 762
>ref|XM_852646.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein-1) (APP-1), transcript variant 19 (LOC482464), mRNA Length = 2437 Score = 69.9 bits (35), Expect = 4e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 ||||||||||| ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 692 atcaagaatctggacaaatctatagataacaaggcactttatgatactttttctgctttt 751 Query: 623 ggaaacattct 633 ||||||||||| Sbjct: 752 ggaaacattct 762
>ref|XM_852603.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein-1) (APP-1), transcript variant 18 (LOC482464), mRNA Length = 2524 Score = 69.9 bits (35), Expect = 4e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 ||||||||||| ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 692 atcaagaatctggacaaatctatagataacaaggcactttatgatactttttctgctttt 751 Query: 623 ggaaacattct 633 ||||||||||| Sbjct: 752 ggaaacattct 762
>ref|XM_852563.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein-1) (APP-1), transcript variant 17 (LOC482464), mRNA Length = 2605 Score = 69.9 bits (35), Expect = 4e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 ||||||||||| ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 692 atcaagaatctggacaaatctatagataacaaggcactttatgatactttttctgctttt 751 Query: 623 ggaaacattct 633 ||||||||||| Sbjct: 752 ggaaacattct 762
>ref|XM_852524.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein-1) (APP-1), transcript variant 16 (LOC482464), mRNA Length = 2599 Score = 69.9 bits (35), Expect = 4e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 ||||||||||| ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 692 atcaagaatctggacaaatctatagataacaaggcactttatgatactttttctgctttt 751 Query: 623 ggaaacattct 633 ||||||||||| Sbjct: 752 ggaaacattct 762
>ref|XM_852486.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein-1) (APP-1), transcript variant 15 (LOC482464), mRNA Length = 2614 Score = 69.9 bits (35), Expect = 4e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 ||||||||||| ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 692 atcaagaatctggacaaatctatagataacaaggcactttatgatactttttctgctttt 751 Query: 623 ggaaacattct 633 ||||||||||| Sbjct: 752 ggaaacattct 762
>ref|XM_852446.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein-1) (APP-1), transcript variant 14 (LOC482464), mRNA Length = 2584 Score = 69.9 bits (35), Expect = 4e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 ||||||||||| ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 692 atcaagaatctggacaaatctatagataacaaggcactttatgatactttttctgctttt 751 Query: 623 ggaaacattct 633 ||||||||||| Sbjct: 752 ggaaacattct 762
>ref|XM_852406.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein-1) (APP-1), transcript variant 13 (LOC482464), mRNA Length = 2344 Score = 69.9 bits (35), Expect = 4e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 ||||||||||| ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 692 atcaagaatctggacaaatctatagataacaaggcactttatgatactttttctgctttt 751 Query: 623 ggaaacattct 633 ||||||||||| Sbjct: 752 ggaaacattct 762
>ref|XM_852365.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein-1) (APP-1), transcript variant 12 (LOC482464), mRNA Length = 2605 Score = 69.9 bits (35), Expect = 4e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 ||||||||||| ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 692 atcaagaatctggacaaatctatagataacaaggcactttatgatactttttctgctttt 751 Query: 623 ggaaacattct 633 ||||||||||| Sbjct: 752 ggaaacattct 762
>ref|XM_852327.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein-1) (APP-1), transcript variant 11 (LOC482464), mRNA Length = 2662 Score = 69.9 bits (35), Expect = 4e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 ||||||||||| ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 692 atcaagaatctggacaaatctatagataacaaggcactttatgatactttttctgctttt 751 Query: 623 ggaaacattct 633 ||||||||||| Sbjct: 752 ggaaacattct 762
>ref|XM_852281.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein-1) (APP-1), transcript variant 10 (LOC482464), mRNA Length = 2644 Score = 69.9 bits (35), Expect = 4e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 ||||||||||| ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 692 atcaagaatctggacaaatctatagataacaaggcactttatgatactttttctgctttt 751 Query: 623 ggaaacattct 633 ||||||||||| Sbjct: 752 ggaaacattct 762
>ref|XM_852244.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein-1) (APP-1), transcript variant 9 (LOC482464), mRNA Length = 2595 Score = 69.9 bits (35), Expect = 4e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 ||||||||||| ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 692 atcaagaatctggacaaatctatagataacaaggcactttatgatactttttctgctttt 751 Query: 623 ggaaacattct 633 ||||||||||| Sbjct: 752 ggaaacattct 762
>ref|XM_852203.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein-1) (APP-1), transcript variant 8 (LOC482464), mRNA Length = 2644 Score = 69.9 bits (35), Expect = 4e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 ||||||||||| ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 692 atcaagaatctggacaaatctatagataacaaggcactttatgatactttttctgctttt 751 Query: 623 ggaaacattct 633 ||||||||||| Sbjct: 752 ggaaacattct 762
>ref|XM_539581.2| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein-1) (APP-1), transcript variant 1 (LOC482464), mRNA Length = 2686 Score = 69.9 bits (35), Expect = 4e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 ||||||||||| ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 692 atcaagaatctggacaaatctatagataacaaggcactttatgatactttttctgctttt 751 Query: 623 ggaaacattct 633 ||||||||||| Sbjct: 752 ggaaacattct 762
>ref|XM_852122.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein-1) (APP-1), transcript variant 7 (LOC482464), mRNA Length = 2273 Score = 69.9 bits (35), Expect = 4e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 ||||||||||| ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 692 atcaagaatctggacaaatctatagataacaaggcactttatgatactttttctgctttt 751 Query: 623 ggaaacattct 633 ||||||||||| Sbjct: 752 ggaaacattct 762
>gb|AC148486.17| Medicago truncatula clone mth2-56d23, complete sequence Length = 121459 Score = 69.9 bits (35), Expect = 4e-08 Identities = 116/143 (81%) Strand = Plus / Minus Query: 1925 ttgtatccacttgttgatcagctggagcatgatcaggctgccaaggttaccggtatgctt 1984 |||||||| || || ||||||||||| |||||| || || |||||||| || |||||| Sbjct: 83038 ttgtatccgctagtagatcagctggaacatgattcagcagctaaggttactggcatgctt 82979 Query: 1985 ttggagatggaccaaactgaggttcttcatctaatcgagtcacctgatgctttgaagtct 2044 ||||||||||||| |||| || | ||| | ||||||||||| |||||| | ||| || Sbjct: 82978 ctggagatggaccagcctgaagtattgcatttgatcgagtcaccagatgctctcaaggct 82919 Query: 2045 aaggtcgctgaagctatggaggt 2067 || || |||||||| |||||||| Sbjct: 82918 aaagttgctgaagccatggaggt 82896 Score = 44.1 bits (22), Expect = 2.3 Identities = 34/38 (89%) Strand = Plus / Minus Query: 1242 caaatggggtcaacaaaggatctggttttgttgcattt 1279 ||||||| |||| || ||||||||| |||||||||||| Sbjct: 85343 caaatggagtcagcagaggatctggctttgttgcattt 85306 Score = 42.1 bits (21), Expect = 8.9 Identities = 93/117 (79%) Strand = Plus / Minus Query: 950 tttggatttgtgaactttgaaaatccggatgatgctgtacatgctgttgaggatttgaat 1009 ||||||||||| || ||||||||| | || ||||||| | |||||||||| || ||| Sbjct: 85736 tttggatttgtcaattttgaaaatgcagaagatgctgctaaagctgttgaggcattaaat 85677 Query: 1010 ggcaagaaatttgatgataaggaattatatgttggtagagctcagaagaagtctgaa 1066 || || || |||| || ||||||| |||||||||| ||| ||||| || |||||| Sbjct: 85676 ggtaaaaaggttgacgacaaggaatggtatgttggtaaagcccagaaaaaatctgaa 85620
>ref|NM_001031597.1| Gallus gallus poly(A) binding protein, cytoplasmic 1 (PABPC1), mRNA emb|AJ719881.1| Gallus gallus mRNA for hypothetical protein, clone 7l20 Length = 2853 Score = 67.9 bits (34), Expect = 2e-07 Identities = 55/62 (88%) Strand = Plus / Plus Query: 575 gacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaaacattctt 634 ||||| ||||| ||||||||||| | ||||||||||||||||| ||||||||||| ||| Sbjct: 795 gacaaatcaattgataacaaagctttgtatgacacattttctgcttttggaaacatcctt 854 Query: 635 tc 636 || Sbjct: 855 tc 856
>emb|CR390628.1| Gallus gallus finished cDNA, clone ChEST353d21 Length = 581 Score = 67.9 bits (34), Expect = 2e-07 Identities = 55/62 (88%) Strand = Plus / Plus Query: 575 gacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaaacattctt 634 ||||| ||||| ||||||||||| | ||||||||||||||||| ||||||||||| ||| Sbjct: 340 gacaaatcaattgataacaaagctttgtatgacacattttctgcttttggaaacatcctt 399 Query: 635 tc 636 || Sbjct: 400 tc 401
>dbj|AK064269.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-E03, full insert sequence Length = 1496 Score = 67.9 bits (34), Expect = 2e-07 Identities = 82/98 (83%) Strand = Plus / Minus Query: 977 gatgatgctgtacatgctgttgaggatttgaatggcaagaaatttgatgataaggaatta 1036 |||||||||| | |||||||||||| | ||||| |||||| || |||| || |||| Sbjct: 627 gatgatgctgctcgtgctgttgaggaacttaatggaaagaaaattaatgacaaagaatgg 568 Query: 1037 tatgttggtagagctcagaagaagtctgaaagggagat 1074 |||||||| ||||||||||||||||| ||||| ||||| Sbjct: 567 tatgttggaagagctcagaagaagtcagaaagagagat 530 Score = 60.0 bits (30), Expect = 4e-05 Identities = 189/242 (78%) Strand = Plus / Minus Query: 413 ggctacgcgtacgtcaacttcagcagccctgccgatgctgcaagggcattggaaatgcta 472 |||||||| ||||||||||||| || ||| | ||||||||||| ||| |||| |||| Sbjct: 1191 ggctacgcctacgtcaacttcaacaaccccgtggatgctgcaagagcactggagctgctc 1132 Query: 473 aacttcactcctgttaatgggaagcctatcaggataatgtattctaaccgtgaccccagc 532 ||||| ||||| | ||||| || || || || ||||||| || ||||||||||| ||| Sbjct: 1131 aactttgctcctctgaatggcaaacccattcgggtaatgtactcaaaccgtgacccaagc 1072 Query: 533 tcacgtaaaagtggtgctgcaaatatatttatcaagaatcttgacaagtcaatagataac 592 || | |||||| |||| || || || |||||||| |||||||| ||||||| || Sbjct: 1071 agtcgcagaagtggatctgctaacattttcatcaagaaccttgacaaagcaatagaccac 1012 Query: 593 aaagcgctatatgacacattttctgcctttggaaacattctttcatgcaaagttgctaca 652 ||| | || |||| || |||||||| ||||| |||||||| || || || ||||| ||| Sbjct: 1011 aaaactctccatgataccttttctgcatttggtaacattctctcctgtaaggttgccaca 952 Query: 653 ga 654 || Sbjct: 951 ga 950 Score = 52.0 bits (26), Expect = 0.009 Identities = 29/30 (96%) Strand = Plus / Minus Query: 1525 cccacagcctggatatggtttccagcaaca 1554 |||||||||||||| ||||||||||||||| Sbjct: 82 cccacagcctggatttggtttccagcaaca 53 Score = 46.1 bits (23), Expect = 0.57 Identities = 53/63 (84%) Strand = Plus / Minus Query: 1217 acttcttgcaaggttatgcgggattcaaatggggtcaacaaaggatctggttttgttgca 1276 ||||| |||||| | ||||| ||| ||||||| || | |||||| ||||| ||||||||| Sbjct: 390 acttcatgcaagataatgcgtgatgcaaatggtgttagcaaagggtctggatttgttgca 331 Query: 1277 ttt 1279 ||| Sbjct: 330 ttt 328
>gb|DQ788634.1| Squalus acanthias putative polyadenylate-binding protein 1 mRNA, partial cds Length = 637 Score = 65.9 bits (33), Expect = 6e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 590 aacaaagcgctatatgacacattttctgcctttggaaacattctttcatgcaa 642 |||||||| ||||||||||||||||| || ||||||||||| ||||| ||||| Sbjct: 131 aacaaagctctatatgacacattttcagcttttggaaacatactttcttgcaa 183
>ref|XM_001113342.1| PREDICTED: Macaca mulatta poly A binding protein, cytoplasmic 4 (PABPC4), mRNA Length = 3133 Score = 63.9 bits (32), Expect = 2e-06 Identities = 68/80 (85%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 1181 atcaagaacctggacaaatctatagataacaaggcactttatgatactttttctgctttt 1240 Query: 623 ggaaacattctttcatgcaa 642 ||||||||||| || ||||| Sbjct: 1241 ggaaacattctatcctgcaa 1260
>ref|NM_119572.3| Arabidopsis thaliana PAB2 (POLY(A)-BINDING PROTEIN 2); RNA binding (PAB2) mRNA, complete cds Length = 2440 Score = 63.9 bits (32), Expect = 2e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 1016 aaatttgatgataaggaattatatgttggtagagctcagaagaagtctgaaaggga 1071 ||||||||||||||||| | |||||||||||||| ||||||||||| || ||||| Sbjct: 1179 aaatttgatgataaggagtggtatgttggtagagcccagaagaagtcagagaggga 1234 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1979 atgcttttggagatggaccaaactga 2004 |||||||||||||||||||| ||||| Sbjct: 2085 atgcttttggagatggaccagactga 2110 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1560 ttcctggaatgagacctggtg 1580 ||||||||||||||||||||| Sbjct: 1723 ttcctggaatgagacctggtg 1743
>ref|NM_103863.2| Arabidopsis thaliana PAB8; RNA binding / translation initiation factor (PAB8) mRNA, complete cds Length = 2570 Score = 63.9 bits (32), Expect = 2e-06 Identities = 77/92 (83%) Strand = Plus / Plus Query: 554 aatatatttatcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattt 613 ||||||||||| |||||||||||||| ||||| ||| ||||||| || | || |||||| Sbjct: 660 aatatatttattaagaatcttgacaaatcaattgatcacaaagcacttcacgagacattt 719 Query: 614 tctgcctttggaaacattctttcatgcaaagt 645 || |||||||| |||||| || |||||||| Sbjct: 720 tcagcctttggtcccattctatcttgcaaagt 751
>gb|AY080718.1| Arabidopsis thaliana putative poly(A)-binding protein (At4g34110) mRNA, partial cds Length = 2033 Score = 63.9 bits (32), Expect = 2e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 1016 aaatttgatgataaggaattatatgttggtagagctcagaagaagtctgaaaggga 1071 ||||||||||||||||| | |||||||||||||| ||||||||||| || ||||| Sbjct: 787 aaatttgatgataaggagtggtatgttggtagagcccagaagaagtcagagaggga 842 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1979 atgcttttggagatggaccaaactga 2004 |||||||||||||||||||| ||||| Sbjct: 1693 atgcttttggagatggaccagactga 1718 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1560 ttcctggaatgagacctggtg 1580 ||||||||||||||||||||| Sbjct: 1331 ttcctggaatgagacctggtg 1351
>gb|AY064622.1| Arabidopsis thaliana putative Poly-A Binding Protein (At1g49760; F14J22.3) mRNA, complete cds Length = 2091 Score = 63.9 bits (32), Expect = 2e-06 Identities = 77/92 (83%) Strand = Plus / Plus Query: 554 aatatatttatcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattt 613 ||||||||||| |||||||||||||| ||||| ||| ||||||| || | || |||||| Sbjct: 400 aatatatttattaagaatcttgacaaatcaattgatcacaaagcacttcacgagacattt 459 Query: 614 tctgcctttggaaacattctttcatgcaaagt 645 || |||||||| |||||| || |||||||| Sbjct: 460 tcagcctttggtcccattctatcttgcaaagt 491
>emb|AL161584.2|ATCHRIV80 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 80 Length = 192861 Score = 63.9 bits (32), Expect = 2e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 1016 aaatttgatgataaggaattatatgttggtagagctcagaagaagtctgaaaggga 1071 ||||||||||||||||| | |||||||||||||| ||||||||||| || ||||| Sbjct: 171543 aaatttgatgataaggagtggtatgttggtagagcccagaagaagtcagagaggga 171598 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1979 atgcttttggagatggaccaaactga 2004 |||||||||||||||||||| ||||| Sbjct: 173300 atgcttttggagatggaccagactga 173325 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1560 ttcctggaatgagacctggtg 1580 ||||||||||||||||||||| Sbjct: 172752 ttcctggaatgagacctggtg 172772
>emb|AL021961.2|ATF28A23 Arabidopsis thaliana DNA chromosome 4, BAC clone F28A23 (ESSA project) Length = 94091 Score = 63.9 bits (32), Expect = 2e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 1016 aaatttgatgataaggaattatatgttggtagagctcagaagaagtctgaaaggga 1071 ||||||||||||||||| | |||||||||||||| ||||||||||| || ||||| Sbjct: 41494 aaatttgatgataaggagtggtatgttggtagagcccagaagaagtcagagaggga 41549 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1979 atgcttttggagatggaccaaactga 2004 |||||||||||||||||||| ||||| Sbjct: 43251 atgcttttggagatggaccagactga 43276 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1560 ttcctggaatgagacctggtg 1580 ||||||||||||||||||||| Sbjct: 42703 ttcctggaatgagacctggtg 42723
>gb|AF370517.1|AF370517 Arabidopsis thaliana Putative Poly-A Binding Protein (F14J22.3) mRNA, complete cds Length = 2509 Score = 63.9 bits (32), Expect = 2e-06 Identities = 77/92 (83%) Strand = Plus / Plus Query: 554 aatatatttatcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattt 613 ||||||||||| |||||||||||||| ||||| ||| ||||||| || | || |||||| Sbjct: 660 aatatatttattaagaatcttgacaaatcaattgatcacaaagcacttcacgagacattt 719 Query: 614 tctgcctttggaaacattctttcatgcaaagt 645 || |||||||| |||||| || |||||||| Sbjct: 720 tcagcctttggtcccattctatcttgcaaagt 751
>gb|BT002354.1| Arabidopsis thaliana clone C104970 putative polyadenylate-binding protein 2 (PABP2) (At4g34110) mRNA, complete cds Length = 1921 Score = 63.9 bits (32), Expect = 2e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 1016 aaatttgatgataaggaattatatgttggtagagctcagaagaagtctgaaaggga 1071 ||||||||||||||||| | |||||||||||||| ||||||||||| || ||||| Sbjct: 835 aaatttgatgataaggagtggtatgttggtagagcccagaagaagtcagagaggga 890 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1979 atgcttttggagatggaccaaactga 2004 |||||||||||||||||||| ||||| Sbjct: 1741 atgcttttggagatggaccagactga 1766 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1560 ttcctggaatgagacctggtg 1580 ||||||||||||||||||||| Sbjct: 1379 ttcctggaatgagacctggtg 1399
>emb|BX827355.1|CNS0A2W2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS43ZH05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1567 Score = 63.9 bits (32), Expect = 2e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 1016 aaatttgatgataaggaattatatgttggtagagctcagaagaagtctgaaaggga 1071 ||||||||||||||||| | |||||||||||||| ||||||||||| || ||||| Sbjct: 341 aaatttgatgataaggagtggtatgttggtagagcccagaagaagtcagagaggga 396 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1979 atgcttttggagatggaccaaactga 2004 |||||||||||||||||||| ||||| Sbjct: 1262 atgcttttggagatggaccagactga 1287
>gb|L19418.1|ATHPAB2A Arabidopsis thaliana poly(A)-binding protein mRNA, complete cds Length = 2427 Score = 63.9 bits (32), Expect = 2e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 1016 aaatttgatgataaggaattatatgttggtagagctcagaagaagtctgaaaggga 1071 ||||||||||||||||| | |||||||||||||| ||||||||||| || ||||| Sbjct: 1166 aaatttgatgataaggagtggtatgttggtagagcccagaagaagtcagagaggga 1221 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1979 atgcttttggagatggaccaaactga 2004 |||||||||||||||||||| ||||| Sbjct: 2072 atgcttttggagatggaccagactga 2097 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1560 ttcctggaatgagacctggtg 1580 ||||||||||||||||||||| Sbjct: 1710 ttcctggaatgagacctggtg 1730
>gb|BC041863.1| Homo sapiens poly(A) binding protein, cytoplasmic 1, mRNA (cDNA clone MGC:43692 IMAGE:5271298), complete cds Length = 3497 Score = 61.9 bits (31), Expect = 1e-05 Identities = 61/71 (85%) Strand = Plus / Plus Query: 569 aatcttgacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaaac 628 ||||| ||||| || || ||||| ||||| |||||||| ||||||||||| ||||| ||| Sbjct: 1441 aatctggacaaatccattgataataaagcactatatgatacattttctgcttttggtaac 1500 Query: 629 attctttcatg 639 || |||||||| Sbjct: 1501 atcctttcatg 1511
>emb|CR655008.2|CNS0F4DI Tetraodon nigroviridis full-length cDNA Length = 1126 Score = 61.9 bits (31), Expect = 1e-05 Identities = 70/83 (84%) Strand = Plus / Plus Query: 560 tttatcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgcc 619 ||||||||||| || || ||||| || || ||||| || || || ||||| || |||||| Sbjct: 904 tttatcaagaacctggataagtccattgacaacaaggccctctacgacaccttctctgcc 963 Query: 620 tttggaaacattctttcatgcaa 642 ||||||||||||||||| ||||| Sbjct: 964 tttggaaacattctttcctgcaa 986
>gb|BC052100.1| Xenopus laevis poly(A) binding protein, cytoplasmic 1, mRNA (cDNA clone MGC:53109 IMAGE:5542430), complete cds Length = 2415 Score = 60.0 bits (30), Expect = 4e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 575 gacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaaacattctt 634 |||||||| || ||||||||||| | || || ||||||||||| ||||||||||||||| Sbjct: 712 gacaagtctattgataacaaagccttgtacgatacattttctgcatttggaaacattctt 771 Query: 635 tc 636 || Sbjct: 772 tc 773
>emb|CT025226.2| Xenopus tropicalis finished cDNA, clone TEgg006b10 Length = 2748 Score = 60.0 bits (30), Expect = 4e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 575 gacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaaacattctt 634 |||||||| || ||||||||||| || || || ||||||||||| ||||||||||| ||| Sbjct: 698 gacaagtctattgataacaaagccctgtacgatacattttctgcatttggaaacatcctt 757 Query: 635 tc 636 || Sbjct: 758 tc 759
>emb|X57483.1|XLPBP X.laevis variant mRNA (X ABP 12-5) for poly(A) binding protein Length = 2582 Score = 60.0 bits (30), Expect = 4e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 575 gacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaaacattctt 634 |||||||| || ||||||||||| | || || ||||||||||| ||||||||||||||| Sbjct: 471 gacaagtctattgataacaaagccttgtacgatacattttctgcatttggaaacattctt 530 Query: 635 tc 636 || Sbjct: 531 tc 532
>ref|NM_001005051.1| Xenopus tropicalis polyadenylate-binding protein 1 (pabp1), mRNA gb|BC076931.1| Xenopus tropicalis polyadenylate-binding protein 1, mRNA (cDNA clone MGC:89198 IMAGE:7016946), complete cds Length = 2740 Score = 60.0 bits (30), Expect = 4e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 575 gacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaaacattctt 634 |||||||| || ||||||||||| || || || ||||||||||| ||||||||||| ||| Sbjct: 685 gacaagtctattgataacaaagccctgtacgatacattttctgcatttggaaacatcctt 744 Query: 635 tc 636 || Sbjct: 745 tc 746
>gb|M27072.1|XELABPEF Xenopus laevis poly(A)-binding protein (ABP-EF) mRNA, complete cds Length = 2545 Score = 60.0 bits (30), Expect = 4e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 575 gacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaaacattctt 634 |||||||| || ||||||||||| | || || ||||||||||| ||||||||||||||| Sbjct: 400 gacaagtctattgataacaaagccttgtacgatacattttctgcatttggaaacattctt 459 Query: 635 tc 636 || Sbjct: 460 tc 461
>ref|NM_127110.1| Arabidopsis thaliana unknown protein (AT2G15500) mRNA, complete cds Length = 399 Score = 58.0 bits (29), Expect = 1e-04 Identities = 32/33 (96%) Strand = Plus / Plus Query: 1039 tgttggtagagctcagaagaagtctgaaaggga 1071 ||||| ||||||||||||||||||||||||||| Sbjct: 132 tgttgatagagctcagaagaagtctgaaaggga 164
>gb|AC006248.4| Arabidopsis thaliana chromosome 2 clone F9O13 map mi398, complete sequence Length = 119753 Score = 58.0 bits (29), Expect = 1e-04 Identities = 32/33 (96%) Strand = Plus / Plus Query: 1039 tgttggtagagctcagaagaagtctgaaaggga 1071 ||||| ||||||||||||||||||||||||||| Sbjct: 12584 tgttgatagagctcagaagaagtctgaaaggga 12616
>ref|NM_001018809.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC57A7.04c), partial mRNA Length = 1962 Score = 58.0 bits (29), Expect = 1e-04 Identities = 35/37 (94%) Strand = Plus / Plus Query: 732 tcaatgggatgcttttgaatgacaaaaaggtttatgt 768 ||||||| ||||||||||| ||||||||||||||||| Sbjct: 683 tcaatggcatgcttttgaacgacaaaaaggtttatgt 719
>emb|Z95396.2|SPAC57A7 S.pombe chromosome I cosmid c57A7 Length = 39101 Score = 58.0 bits (29), Expect = 1e-04 Identities = 35/37 (94%) Strand = Plus / Plus Query: 732 tcaatgggatgcttttgaatgacaaaaaggtttatgt 768 ||||||| ||||||||||| ||||||||||||||||| Sbjct: 30845 tcaatggcatgcttttgaacgacaaaaaggtttatgt 30881
>gb|M64603.1|YSPPABP Schizosaccharomyces pombe poly(A)-binding protein mRNA, 5' cds Length = 1884 Score = 58.0 bits (29), Expect = 1e-04 Identities = 35/37 (94%) Strand = Plus / Plus Query: 732 tcaatgggatgcttttgaatgacaaaaaggtttatgt 768 ||||||| ||||||||||| ||||||||||||||||| Sbjct: 641 tcaatggcatgcttttgaacgacaaaaaggtttatgt 677
>ref|NM_148917.2| Mus musculus poly A binding protein, cytoplasmic 4 (Pabpc4), transcript variant 2, mRNA Length = 2500 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||| ||||| || || |||||||| || ||||||||| Sbjct: 637 atcaagaacctggacaaatccatagacaacaaggcactgtatgacactttctctgccttt 696 Query: 623 ggaaacat 630 |||||||| Sbjct: 697 ggaaacat 704
>ref|NM_003819.2| Homo sapiens poly(A) binding protein, cytoplasmic 4 (inducible form) (PABPC4), mRNA Length = 3065 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 1101 atcaagaacctggacaaatctatagataacaaggcactttatgatactttttctgctttt 1160 Query: 623 ggaaacat 630 |||||||| Sbjct: 1161 ggaaacat 1168
>ref|XM_001171167.1| PREDICTED: Pan troglodytes poly A binding protein, cytoplasmic 4, transcript variant 2 (PABPC4), mRNA Length = 4003 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 1134 atcaagaacctggacaaatctatagataacaaggcactttatgatactttttctgctttt 1193 Query: 623 ggaaacat 630 |||||||| Sbjct: 1194 ggaaacat 1201
>ref|XM_001170937.1| PREDICTED: Pan troglodytes poly A binding protein, cytoplasmic 4, transcript variant 1 (PABPC4), mRNA Length = 3690 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 1134 atcaagaacctggacaaatctatagataacaaggcactttatgatactttttctgctttt 1193 Query: 623 ggaaacat 630 |||||||| Sbjct: 1194 ggaaacat 1201
>ref|XM_513344.2| PREDICTED: Pan troglodytes poly A binding protein, cytoplasmic 4, transcript variant 3 (PABPC4), mRNA Length = 3085 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 1134 atcaagaacctggacaaatctatagataacaaggcactttatgatactttttctgctttt 1193 Query: 623 ggaaacat 630 |||||||| Sbjct: 1194 ggaaacat 1201
>gb|BT027754.1| Gasterosteus aculeatus clone CNB09-F04 mRNA sequence Length = 2907 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || |||||||| || ||||||||||| || || ||||| || ||||| ||| Sbjct: 929 atcaagaacctggacaagtccattgataacaaagccctctacgacaccttctctgcattt 988 Query: 623 ggaaacat 630 |||||||| Sbjct: 989 ggaaacat 996
>ref|XM_001005363.1| PREDICTED: Mus musculus similar to poly(A) binding protein, cytoplasmic 4 isoform 2 (LOC673348), mRNA Length = 846 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||| ||||| || || |||||||| || ||||||||| Sbjct: 280 atcaagaacctggacaaatccatagacaacaaggcactgtatgacactttctctgccttt 339 Query: 623 ggaaacat 630 |||||||| Sbjct: 340 ggaaacat 347
>ref|XM_900968.2| PREDICTED: Mus musculus similar to Poly(A) binding protein, cytoplasmic 4, isoform 1, transcript variant 3 (LOC544782), mRNA Length = 2495 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||| ||||| || || |||||||| || ||||||||| Sbjct: 587 atcaagaacctggacaaatccatagacaacaaggcactgtatgacactttctctgccttt 646 Query: 623 ggaaacat 630 |||||||| Sbjct: 647 ggaaacat 654
>ref|XM_900973.2| PREDICTED: Mus musculus similar to Poly(A) binding protein, cytoplasmic 4, isoform 1, transcript variant 4 (LOC544782), mRNA Length = 2459 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||| ||||| || || |||||||| || ||||||||| Sbjct: 587 atcaagaacctggacaaatccatagacaacaaggcactgtatgacactttctctgccttt 646 Query: 623 ggaaacat 630 |||||||| Sbjct: 647 ggaaacat 654
>ref|XM_900979.2| PREDICTED: Mus musculus similar to Poly(A) binding protein, cytoplasmic 4, isoform 1, transcript variant 5 (LOC544782), mRNA Length = 2525 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||| ||||| || || |||||||| || ||||||||| Sbjct: 587 atcaagaacctggacaaatccatagacaacaaggcactgtatgacactttctctgccttt 646 Query: 623 ggaaacat 630 |||||||| Sbjct: 647 ggaaacat 654
>ref|XM_893653.2| PREDICTED: Mus musculus similar to Poly(A) binding protein, cytoplasmic 4, isoform 1, transcript variant 2 (LOC544782), mRNA Length = 2597 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||| ||||| || || |||||||| || ||||||||| Sbjct: 587 atcaagaacctggacaaatccatagacaacaaggcactgtatgacactttctctgccttt 646 Query: 623 ggaaacat 630 |||||||| Sbjct: 647 ggaaacat 654
>ref|XM_900938.2| PREDICTED: Mus musculus similar to poly(A) binding protein, cytoplasmic 4 isoform 1, transcript variant 2 (LOC624424), mRNA Length = 2495 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||| ||||| || || |||||||| || ||||||||| Sbjct: 587 atcaagaacctggacaaatccatagacaacaaggcactgtatgacactttctctgccttt 646 Query: 623 ggaaacat 630 |||||||| Sbjct: 647 ggaaacat 654
>ref|XM_900940.2| PREDICTED: Mus musculus similar to poly(A) binding protein, cytoplasmic 4 isoform 1, transcript variant 3 (LOC624424), mRNA Length = 2459 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||| ||||| || || |||||||| || ||||||||| Sbjct: 587 atcaagaacctggacaaatccatagacaacaaggcactgtatgacactttctctgccttt 646 Query: 623 ggaaacat 630 |||||||| Sbjct: 647 ggaaacat 654
>ref|XM_900943.2| PREDICTED: Mus musculus similar to poly(A) binding protein, cytoplasmic 4 isoform 1, transcript variant 4 (LOC624424), mRNA Length = 2525 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||| ||||| || || |||||||| || ||||||||| Sbjct: 587 atcaagaacctggacaaatccatagacaacaaggcactgtatgacactttctctgccttt 646 Query: 623 ggaaacat 630 |||||||| Sbjct: 647 ggaaacat 654
>ref|XM_484034.4| PREDICTED: Mus musculus similar to poly(A) binding protein, cytoplasmic 4 isoform 1, transcript variant 1 (LOC624424), mRNA Length = 2597 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||| ||||| || || |||||||| || ||||||||| Sbjct: 587 atcaagaacctggacaaatccatagacaacaaggcactgtatgacactttctctgccttt 646 Query: 623 ggaaacat 630 |||||||| Sbjct: 647 ggaaacat 654
>ref|XM_900897.2| PREDICTED: Mus musculus similar to poly(A) binding protein, cytoplasmic 4 isoform 1, transcript variant 2 (LOC624403), mRNA Length = 2459 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||| ||||| || || |||||||| || ||||||||| Sbjct: 587 atcaagaacctggacaaatccatagacaacaaggcactgtatgacactttctctgccttt 646 Query: 623 ggaaacat 630 |||||||| Sbjct: 647 ggaaacat 654
>ref|XM_893523.2| PREDICTED: Mus musculus similar to poly(A) binding protein, cytoplasmic 4 isoform 1, transcript variant 1 (LOC624403), mRNA Length = 2594 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||| ||||| || || |||||||| || ||||||||| Sbjct: 587 atcaagaacctggacaaatccatagacaacaaggcactgtatgacactttctctgccttt 646 Query: 623 ggaaacat 630 |||||||| Sbjct: 647 ggaaacat 654
>gb|BC058263.1| Mus musculus cDNA clone IMAGE:6487338, **** WARNING: chimeric clone **** Length = 3192 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||| ||||| || || |||||||| || ||||||||| Sbjct: 1084 atcaagaacctggacaaatccatagacaacaaggcactgtatgacactttctctgccttt 1143 Query: 623 ggaaacat 630 |||||||| Sbjct: 1144 ggaaacat 1151
>ref|XM_876713.1| PREDICTED: Bos taurus similar to poly(A) binding protein, cytoplasmic 4 isoform 1, transcript variant 18 (LOC534576), mRNA Length = 3079 Score = 56.0 bits (28), Expect = 6e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 1175 atcaagaacctggacaaatctatagataacaaggcactttatgatactttttctgctttt 1234 Query: 623 ggaaacattctttcatgcaa 642 || |||||||| || ||||| Sbjct: 1235 gggaacattctgtcctgcaa 1254
>ref|XM_876659.1| PREDICTED: Bos taurus similar to poly(A) binding protein, cytoplasmic 4 isoform 1, transcript variant 17 (LOC534576), mRNA Length = 3058 Score = 56.0 bits (28), Expect = 6e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 1175 atcaagaacctggacaaatctatagataacaaggcactttatgatactttttctgctttt 1234 Query: 623 ggaaacattctttcatgcaa 642 || |||||||| || ||||| Sbjct: 1235 gggaacattctgtcctgcaa 1254
>ref|XM_876597.1| PREDICTED: Bos taurus similar to poly(A) binding protein, cytoplasmic 4 isoform 1, transcript variant 16 (LOC534576), mRNA Length = 3037 Score = 56.0 bits (28), Expect = 6e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 1175 atcaagaacctggacaaatctatagataacaaggcactttatgatactttttctgctttt 1234 Query: 623 ggaaacattctttcatgcaa 642 || |||||||| || ||||| Sbjct: 1235 gggaacattctgtcctgcaa 1254
>ref|XM_876537.1| PREDICTED: Bos taurus similar to poly(A) binding protein, cytoplasmic 4 isoform 1, transcript variant 15 (LOC534576), mRNA Length = 3070 Score = 56.0 bits (28), Expect = 6e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 1175 atcaagaacctggacaaatctatagataacaaggcactttatgatactttttctgctttt 1234 Query: 623 ggaaacattctttcatgcaa 642 || |||||||| || ||||| Sbjct: 1235 gggaacattctgtcctgcaa 1254
>ref|XM_876472.1| PREDICTED: Bos taurus similar to poly(A) binding protein, cytoplasmic 4 isoform 1, transcript variant 14 (LOC534576), mRNA Length = 2923 Score = 56.0 bits (28), Expect = 6e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 1175 atcaagaacctggacaaatctatagataacaaggcactttatgatactttttctgctttt 1234 Query: 623 ggaaacattctttcatgcaa 642 || |||||||| || ||||| Sbjct: 1235 gggaacattctgtcctgcaa 1254
>ref|XM_876416.1| PREDICTED: Bos taurus similar to poly(A) binding protein, cytoplasmic 4 isoform 1, transcript variant 13 (LOC534576), mRNA Length = 2827 Score = 56.0 bits (28), Expect = 6e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 1175 atcaagaacctggacaaatctatagataacaaggcactttatgatactttttctgctttt 1234 Query: 623 ggaaacattctttcatgcaa 642 || |||||||| || ||||| Sbjct: 1235 gggaacattctgtcctgcaa 1254
>ref|XM_876356.1| PREDICTED: Bos taurus similar to poly(A) binding protein, cytoplasmic 4 isoform 1, transcript variant 12 (LOC534576), mRNA Length = 3040 Score = 56.0 bits (28), Expect = 6e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 1175 atcaagaacctggacaaatctatagataacaaggcactttatgatactttttctgctttt 1234 Query: 623 ggaaacattctttcatgcaa 642 || |||||||| || ||||| Sbjct: 1235 gggaacattctgtcctgcaa 1254
>ref|XM_876291.1| PREDICTED: Bos taurus similar to poly(A) binding protein, cytoplasmic 4 isoform 1, transcript variant 11 (LOC534576), mRNA Length = 3133 Score = 56.0 bits (28), Expect = 6e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 1175 atcaagaacctggacaaatctatagataacaaggcactttatgatactttttctgctttt 1234 Query: 623 ggaaacattctttcatgcaa 642 || |||||||| || ||||| Sbjct: 1235 gggaacattctgtcctgcaa 1254
>ref|XM_876229.1| PREDICTED: Bos taurus similar to poly(A) binding protein, cytoplasmic 4 isoform 1, transcript variant 10 (LOC534576), mRNA Length = 3169 Score = 56.0 bits (28), Expect = 6e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 1175 atcaagaacctggacaaatctatagataacaaggcactttatgatactttttctgctttt 1234 Query: 623 ggaaacattctttcatgcaa 642 || |||||||| || ||||| Sbjct: 1235 gggaacattctgtcctgcaa 1254
>ref|XM_876170.1| PREDICTED: Bos taurus similar to poly(A) binding protein, cytoplasmic 4 isoform 1, transcript variant 9 (LOC534576), mRNA Length = 3080 Score = 56.0 bits (28), Expect = 6e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 1175 atcaagaacctggacaaatctatagataacaaggcactttatgatactttttctgctttt 1234 Query: 623 ggaaacattctttcatgcaa 642 || |||||||| || ||||| Sbjct: 1235 gggaacattctgtcctgcaa 1254
>ref|XM_876036.1| PREDICTED: Bos taurus similar to poly(A) binding protein, cytoplasmic 4 isoform 1, transcript variant 7 (LOC534576), mRNA Length = 3202 Score = 56.0 bits (28), Expect = 6e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 1202 atcaagaacctggacaaatctatagataacaaggcactttatgatactttttctgctttt 1261 Query: 623 ggaaacattctttcatgcaa 642 || |||||||| || ||||| Sbjct: 1262 gggaacattctgtcctgcaa 1281
>ref|XM_614388.2| PREDICTED: Bos taurus similar to poly(A) binding protein, cytoplasmic 4 isoform 1, transcript variant 1 (LOC534576), mRNA Length = 3157 Score = 56.0 bits (28), Expect = 6e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 1175 atcaagaacctggacaaatctatagataacaaggcactttatgatactttttctgctttt 1234 Query: 623 ggaaacattctttcatgcaa 642 || |||||||| || ||||| Sbjct: 1235 gggaacattctgtcctgcaa 1254
>ref|XM_875755.1| PREDICTED: Bos taurus similar to poly(A) binding protein, cytoplasmic 4 isoform 1, transcript variant 4 (LOC534576), mRNA Length = 1774 Score = 56.0 bits (28), Expect = 6e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 1175 atcaagaacctggacaaatctatagataacaaggcactttatgatactttttctgctttt 1234 Query: 623 ggaaacattctttcatgcaa 642 || |||||||| || ||||| Sbjct: 1235 gggaacattctgtcctgcaa 1254
>ref|XM_875679.1| PREDICTED: Bos taurus similar to poly(A) binding protein, cytoplasmic 4 isoform 1, transcript variant 3 (LOC534576), mRNA Length = 2453 Score = 56.0 bits (28), Expect = 6e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 1175 atcaagaacctggacaaatctatagataacaaggcactttatgatactttttctgctttt 1234 Query: 623 ggaaacattctttcatgcaa 642 || |||||||| || ||||| Sbjct: 1235 gggaacattctgtcctgcaa 1254
>ref|XM_875610.1| PREDICTED: Bos taurus similar to poly(A) binding protein, cytoplasmic 4 isoform 1, transcript variant 2 (LOC534576), mRNA Length = 3124 Score = 56.0 bits (28), Expect = 6e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 1175 atcaagaacctggacaaatctatagataacaaggcactttatgatactttttctgctttt 1234 Query: 623 ggaaacattctttcatgcaa 642 || |||||||| || ||||| Sbjct: 1235 gggaacattctgtcctgcaa 1254
>gb|BC010345.1| Mus musculus poly A binding protein, cytoplasmic 4, mRNA (cDNA clone MGC:11665 IMAGE:3707766), complete cds Length = 2513 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||| ||||| || || |||||||| || ||||||||| Sbjct: 637 atcaagaacctggacaaatccatagacaacaaggcactgtatgacactttctctgccttt 696 Query: 623 ggaaacat 630 |||||||| Sbjct: 697 ggaaacat 704
>ref|NM_130881.2| Mus musculus poly A binding protein, cytoplasmic 4 (Pabpc4), transcript variant 1, mRNA gb|BC056432.1| Mus musculus poly A binding protein, cytoplasmic 4, mRNA (cDNA clone MGC:66682 IMAGE:5696369), complete cds Length = 3038 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||| ||||| || || |||||||| || ||||||||| Sbjct: 1011 atcaagaacctggacaaatccatagacaacaaggcactgtatgacactttctctgccttt 1070 Query: 623 ggaaacat 630 |||||||| Sbjct: 1071 ggaaacat 1078
>gb|BC003283.1| Mus musculus poly A binding protein, cytoplasmic 4, mRNA (cDNA clone MGC:6685 IMAGE:3582181), complete cds Length = 2254 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||| ||||| || || |||||||| || ||||||||| Sbjct: 558 atcaagaacctggacaaatccatagacaacaaggcactgtatgacactttctctgccttt 617 Query: 623 ggaaacat 630 |||||||| Sbjct: 618 ggaaacat 625
>gb|AC098722.3| Mus musculus BAC clone RP23-3B20 from 14, complete sequence Length = 197946 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||| ||||| || || |||||||| || ||||||||| Sbjct: 81483 atcaagaacctggacaaatccatagacaacaaggcactgtatgacactttctctgccttt 81424 Query: 623 ggaaacat 630 |||||||| Sbjct: 81423 ggaaacat 81416
>dbj|AK139580.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library, clone:B020005H24 product:Human polyadenylate binding protein II (Fragment) homolog [Homo sapiens], full insert sequence Length = 1872 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||| ||||| || || |||||||| || ||||||||| Sbjct: 12 atcaagaacctggacaaatccatagacaacaaggcactgtatgacactttctctgccttt 71 Query: 623 ggaaacat 630 |||||||| Sbjct: 72 ggaaacat 79
>gb|BC094755.1| Homo sapiens poly(A) binding protein, cytoplasmic 4 (inducible form), mRNA (cDNA clone MGC:104624 IMAGE:30331896), complete cds Length = 3152 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 1146 atcaagaacctggacaaatctatagataacaaggcactttatgatactttttctgctttt 1205 Query: 623 ggaaacat 630 |||||||| Sbjct: 1206 ggaaacat 1213
>gb|BC071591.1| Homo sapiens poly(A) binding protein, cytoplasmic 4 (inducible form), mRNA (cDNA clone MGC:87368 IMAGE:5265829), complete cds Length = 3150 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 1143 atcaagaacctggacaaatctatagataacaaggcactttatgatactttttctgctttt 1202 Query: 623 ggaaacat 630 |||||||| Sbjct: 1203 ggaaacat 1210
>gb|BC029969.1| Homo sapiens poly(A) binding protein, cytoplasmic 4 (inducible form), mRNA (cDNA clone IMAGE:3461313) Length = 2782 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 757 atcaagaacctggacaaatctatagataacaaggcactttatgatactttttctgctttt 816 Query: 623 ggaaacat 630 |||||||| Sbjct: 817 ggaaacat 824
>ref|NR_002862.1| Mus musculus poly(A)-binding protein, cytoplasmic pseudogene (Pabpc4l) on chromosome 14 dbj|AK048750.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230040C07 product:unclassifiable, full insert sequence Length = 2672 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||| ||||| || || |||||||| || ||||||||| Sbjct: 1384 atcaagaacctggacaaatccatagacaacaaggcactgtatgacactttctctgccttt 1325 Query: 623 ggaaacat 630 |||||||| Sbjct: 1324 ggaaacat 1317
>emb|AL845289.3| Human DNA sequence from clone RP11-15J6 on chromosome 1 Contains the 5' end of the PABPC4 gene for cytoplasmic 4 (inducible form) poly(A) binding protein, part of a novel gene and a CpG island, complete sequence Length = 16269 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 1267 atcaagaacctggacaaatctatagataacaaggcactttatgatactttttctgctttt 1208 Query: 623 ggaaacat 630 |||||||| Sbjct: 1207 ggaaacat 1200
>emb|AL365277.23| Human DNA sequence from clone RP11-69E11 on chromosome 1 Contains the 3' end of the MACF1 gene for microtubule-actin crosslinking factor 1, the BMP8A gene for bone morphogenetic protein 8A, a 3-oxoacid CoA transferase 2 (OXCT2) pseudogene, a novel gene, a peptidylprolyl isomerase E (cyclophilin E) (PPIE) pseudogene, the 3' end of the PABPC4 gene for cytoplasmic 4 (inducible form) poly(A) binding protein, part of a novel gene and two CpG islands, complete sequence Length = 115968 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 115235 atcaagaacctggacaaatctatagataacaaggcactttatgatactttttctgctttt 115176 Query: 623 ggaaacat 630 |||||||| Sbjct: 115175 ggaaacat 115168
>emb|AL596386.16| Mouse DNA sequence from clone RP23-331I21 on chromosome 11 Contains the 3' end of the Myo15 gene for myosin XV, a novel gene, eleven ubiquitin pseudogenes, four poly A binding protein, cytoplasmic 4 (Pabpc4) pseudogenes and a CpG island, complete sequence Length = 201663 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||| ||||| || || |||||||| || ||||||||| Sbjct: 91312 atcaagaacctggacaaatccatagacaacaaggcactgtatgacactttctctgccttt 91253 Query: 623 ggaaacat 630 |||||||| Sbjct: 91252 ggaaacat 91245 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||| ||||| || || |||||||| || ||||||||| Sbjct: 148792 atcaagaacctggacaaatccatagacaacaaggcactgtatgacactttctctgccttt 148733 Query: 623 ggaaacat 630 |||||||| Sbjct: 148732 ggaaacat 148725 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||| ||||| || || |||||||| || ||||||||| Sbjct: 186888 atcaagaacctggacaaatccatagacaacaaggcactgtatgacactttctctgccttt 186829 Query: 623 ggaaacat 630 |||||||| Sbjct: 186828 ggaaacat 186821 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||| ||||| || || |||||||| || ||||||||| Sbjct: 199927 atcaagaacctggacaaatccatagacaacaaggcactgtatgacactttctctgccttt 199868 Query: 623 ggaaacat 630 |||||||| Sbjct: 199867 ggaaacat 199860
>emb|AL596215.7| Mouse DNA sequence from clone RP23-278I21 on chromosome 11, complete sequence Length = 203117 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||| ||||| || || |||||||| || ||||||||| Sbjct: 202854 atcaagaacctggacaaatccatagacaacaaggcactgtatgacactttctctgccttt 202913 Query: 623 ggaaacat 630 |||||||| Sbjct: 202914 ggaaacat 202921
>gb|U33818.1|HSU33818 Human inducible poly(A)-binding protein mRNA, complete cds Length = 2394 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 460 atcaagaacctggacaaatctatagataacaaggcactttatgatactttttctgctttt 519 Query: 623 ggaaacat 630 |||||||| Sbjct: 520 ggaaacat 527
>emb|AL929413.13| Mouse DNA sequence from clone RP24-215D6 on chromosome 4, complete sequence Length = 117742 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||| ||||| || || |||||||| || ||||||||| Sbjct: 15932 atcaagaacctggacaaatccatagacaacaaggcactgtatgacactttctctgccttt 15991 Query: 623 ggaaacat 630 |||||||| Sbjct: 15992 ggaaacat 15999 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||| ||||| || || |||||||| || ||||||||| Sbjct: 26938 atcaagaacctggacaaatccatagacaacaaggcactgtatgacactttctctgccttt 26997 Query: 623 ggaaacat 630 |||||||| Sbjct: 26998 ggaaacat 27005
>gb|U75686.1|HSU75686 Homo sapiens polyadenylate binding protein mRNA, complete cds Length = 3118 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||||||||| || || ||||| || |||||||| ||| Sbjct: 1101 atcaagaacctggacaaatctatagataacaaggcactttatgatactttttctgctttt 1160 Query: 623 ggaaacat 630 |||||||| Sbjct: 1161 ggaaacat 1168
>emb|AL606934.12| Mouse DNA sequence from clone RP23-138L21 on chromosome 4, complete sequence Length = 211580 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||| ||||| || || |||||||| || ||||||||| Sbjct: 208108 atcaagaacctggacaaatccatagacaacaaggcactgtatgacactttctctgccttt 208167 Query: 623 ggaaacat 630 |||||||| Sbjct: 208168 ggaaacat 208175
>ref|XR_024265.1| PREDICTED: Pan troglodytes similar to poly(A) binding protein (PABPC1), mRNA Length = 3790 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Plus Query: 569 aatcttgacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaaac 628 ||||| ||||| || || ||||| ||||| || ||||| ||||||||||| ||||| ||| Sbjct: 1048 aatctggacaaatccattgataataaagcactgtatgatacattttctgcttttggtaac 1107 Query: 629 attctttcatg 639 || |||||||| Sbjct: 1108 atcctttcatg 1118
>gb|DQ896500.1| Homo sapiens clone FLH194895.01L; RZPDo839G0370D PABPC1 mRNA, partial sequence Length = 1911 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Plus Query: 569 aatcttgacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaaac 628 ||||| ||||| || || ||||| ||||| || ||||| ||||||||||| ||||| ||| Sbjct: 313 aatctggacaaatccattgataataaagcactgtatgatacattttctgcttttggtaac 372 Query: 629 attctttcatg 639 || |||||||| Sbjct: 373 atcctttcatg 383
>gb|DQ893508.1| Synthetic construct Homo sapiens clone FLH194899.01X; RZPDo839G0380D PABPC1 mRNA, complete sequence Length = 1911 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Plus Query: 569 aatcttgacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaaac 628 ||||| ||||| || || ||||| ||||| || ||||| ||||||||||| ||||| ||| Sbjct: 313 aatctggacaaatccattgataataaagcactgtatgatacattttctgcttttggtaac 372 Query: 629 attctttcatg 639 || |||||||| Sbjct: 373 atcctttcatg 383
>ref|XM_001096930.1| PREDICTED: Macaca mulatta poly(A) binding protein, cytoplasmic 1 (PABPC1), mRNA Length = 2267 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Plus Query: 569 aatcttgacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaaac 628 ||||| ||||| || || ||||| ||||| || ||||| ||||||||||| ||||| ||| Sbjct: 193 aatctggacaaatccattgataataaagcactgtatgatacattttctgcttttggtaac 252 Query: 629 attctttcatg 639 || |||||||| Sbjct: 253 atcctttcatg 263
>ref|XM_001098133.1| PREDICTED: Macaca mulatta poly(A) binding protein, cytoplasmic 1, transcript variant 1 (PABPC1), mRNA Length = 2340 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Plus Query: 569 aatcttgacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaaac 628 ||||| ||||| || || ||||| ||||| || ||||| ||||||||||| ||||| ||| Sbjct: 818 aatctggacaaatccattgataataaagcactgtatgatacattttctgcttttggtaac 877 Query: 629 attctttcatg 639 || |||||||| Sbjct: 878 atcctttcatg 888
>ref|XM_001098239.1| PREDICTED: Macaca mulatta poly(A) binding protein, cytoplasmic 1, transcript variant 2 (PABPC1), mRNA Length = 2601 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Plus Query: 569 aatcttgacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaaac 628 ||||| ||||| || || ||||| ||||| || ||||| ||||||||||| ||||| ||| Sbjct: 818 aatctggacaaatccattgataataaagcactgtatgatacattttctgcttttggtaac 877 Query: 629 attctttcatg 639 || |||||||| Sbjct: 878 atcctttcatg 888
>gb|BC073435.1| Xenopus laevis MGC80927 protein, mRNA (cDNA clone MGC:80927 IMAGE:5516025), complete cds Length = 2716 Score = 54.0 bits (27), Expect = 0.002 Identities = 51/59 (86%) Strand = Plus / Plus Query: 566 aagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgcctttgg 624 |||||||| ||||| ||||| || || ||||| ||||||||||| |||||||| ||||| Sbjct: 780 aagaatctagacaaatcaattgacaataaagcactatatgacactttttctgcatttgg 838
>gb|BC015958.2| Homo sapiens poly(A) binding protein, cytoplasmic 1, mRNA (cDNA clone MGC:15290 IMAGE:3940309), complete cds Length = 2777 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Plus Query: 569 aatcttgacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaaac 628 ||||| ||||| || || ||||| ||||| || ||||| ||||||||||| ||||| ||| Sbjct: 712 aatctggacaaatccattgataataaagcactgtatgatacattttctgcttttggtaac 771 Query: 629 attctttcatg 639 || |||||||| Sbjct: 772 atcctttcatg 782
>dbj|AK095194.1| Homo sapiens cDNA FLJ37875 fis, clone BRSSN2018771, highly similar to POLYADENYLATE-BINDING PROTEIN 1 Length = 2351 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Plus Query: 569 aatcttgacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaaac 628 ||||| ||||| || || ||||| ||||| || ||||| ||||||||||| ||||| ||| Sbjct: 652 aatctggacaaatccattgataataaagcactgtatgatacattttctgcttttggtaac 711 Query: 629 attctttcatg 639 || |||||||| Sbjct: 712 atcctttcatg 722
>emb|Z26042.1|HAPABP A.phyllitidis PABP mRNA for poly(A)-binding protein Length = 2409 Score = 54.0 bits (27), Expect = 0.002 Identities = 39/43 (90%) Strand = Plus / Plus Query: 931 tgatggtaaatccagatgctttggatttgtgaactttgaaaat 973 |||||| ||||| | |||||||||||||||||| ||||||||| Sbjct: 1007 tgatggcaaatcaaaatgctttggatttgtgaattttgaaaat 1049 Score = 50.1 bits (25), Expect = 0.037 Identities = 55/65 (84%) Strand = Plus / Plus Query: 506 ataatgtattctaaccgtgaccccagctcacgtaaaagtggtgctgcaaatatatttatc 565 |||||||||||| ||||||| || ||| || || ||||||||||| |||||||| ||| Sbjct: 585 ataatgtattctcaccgtgatcctagcattcgcaagagtggtgctgccaatatattcatc 644 Query: 566 aagaa 570 ||||| Sbjct: 645 aagaa 649 Score = 42.1 bits (21), Expect = 8.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 1947 tggagcatgatcaggctgccaaggttaccggtatgct 1983 ||||||||||||| |||| ||||||||| || ||||| Sbjct: 1999 tggagcatgatcatgctggcaaggttacaggaatgct 2035
>ref|NM_001015753.1| Xenopus tropicalis MGC107951 protein (MGC107951), mRNA gb|BC089689.1| Xenopus tropicalis MGC107951 protein, mRNA (cDNA clone MGC:107951 IMAGE:7025146), complete cds Length = 2383 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Plus Query: 566 aagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgcctttgga 625 ||||| || ||||| ||||| || || ||||| ||||||||||| |||||||| |||||| Sbjct: 530 aagaacctagacaaatcaattgacaataaagcactatatgacactttttctgcatttgga 589 Query: 626 aacattctttc 636 || || ||||| Sbjct: 590 aatatcctttc 600
>dbj|AK130523.1| Homo sapiens cDNA FLJ27013 fis, clone SLV05396, highly similar to Polyadenylate-binding protein 1 Length = 2621 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Plus Query: 569 aatcttgacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaaac 628 ||||| ||||| || || ||||| ||||| || ||||| ||||||||||| ||||| ||| Sbjct: 817 aatctggacaaatccattgataataaagcactgtatgatacattttctgcttttggtaac 876 Query: 629 attctttcatg 639 || |||||||| Sbjct: 877 atcctttcatg 887
>gb|AY103944.1| Zea mays PCO133356 mRNA sequence Length = 2499 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 1037 tatgttggtagagctcagaagaagtctgaaagggagatg 1075 |||||||| ||||||||||||||||| ||||| |||||| Sbjct: 1067 tatgttggaagagctcagaagaagtcagaaagagagatg 1105 Score = 52.0 bits (26), Expect = 0.009 Identities = 77/94 (81%) Strand = Plus / Plus Query: 1979 atgcttttggagatggaccaaactgaggttcttcatctaatcgagtcacctgatgctttg 2038 ||||||||||||||||| || |||||||| || || || | ||||| |||||||| | Sbjct: 2006 atgcttttggagatggatcagactgaggtcctccacctgcttgagtcccctgatgccctc 2065 Query: 2039 aagtctaaggtcgctgaagctatggaggttctcc 2072 ||||| ||||| ||||| || ||||| ||||||| Sbjct: 2066 aagtcaaaggttgctgaggcgatggatgttctcc 2099
>gb|U68094.1|HSPABPS02 Human poly(A)-binding protein (PABP) gene, exon 2 Length = 399 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Plus Query: 569 aatcttgacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaaac 628 ||||| ||||| || || ||||| ||||| || ||||| ||||||||||| ||||| ||| Sbjct: 237 aatctggacaaatccattgataataaagcactgtatgatacattttctgcttttggtaac 296 Query: 629 attctttcatg 639 || |||||||| Sbjct: 297 atcctttcatg 307
>ref|NM_002568.3| Homo sapiens poly(A) binding protein, cytoplasmic 1 (PABPC1), mRNA Length = 2869 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Plus Query: 569 aatcttgacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaaac 628 ||||| ||||| || || ||||| ||||| || ||||| ||||||||||| ||||| ||| Sbjct: 817 aatctggacaaatccattgataataaagcactgtatgatacattttctgcttttggtaac 876 Query: 629 attctttcatg 639 || |||||||| Sbjct: 877 atcctttcatg 887
>gb|BC023217.1| Homo sapiens cDNA clone IMAGE:4522410 Length = 2515 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Plus Query: 569 aatcttgacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaaac 628 ||||| ||||| || || ||||| ||||| || ||||| ||||||||||| ||||| ||| Sbjct: 796 aatctggacaaatccattgataataaagcactgtatgatacattttctgcttttggtaac 855 Query: 629 attctttcatg 639 || |||||||| Sbjct: 856 atcctttcatg 866
>gb|BC023520.2| Homo sapiens poly(A) binding protein, cytoplasmic 1, mRNA (cDNA clone MGC:12727 IMAGE:4123269), complete cds Length = 2554 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Plus Query: 569 aatcttgacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaaac 628 ||||| ||||| || || ||||| ||||| || ||||| ||||||||||| ||||| ||| Sbjct: 796 aatctggacaaatccattgataataaagcactgtatgatacattttctgcttttggtaac 855 Query: 629 attctttcatg 639 || |||||||| Sbjct: 856 atcctttcatg 866
>emb|Z48501.1|HSPABPII H.sapiens mRNA for polyadenylate binding protein II Length = 1569 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Plus Query: 569 aatcttgacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaaac 628 ||||| ||||| || || ||||| ||||| || ||||| ||||||||||| ||||| ||| Sbjct: 238 aatctggacaaatccattgataataaagcactgtatgatacattttctgcttttggtaac 297 Query: 629 attctttcatg 639 || |||||||| Sbjct: 298 atcctttcatg 308
>emb|Y00345.1|HSPOLYAB Human mRNA for polyA binding protein Length = 2848 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Plus Query: 569 aatcttgacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaaac 628 ||||| ||||| || || ||||| ||||| || ||||| ||||||||||| ||||| ||| Sbjct: 815 aatctggacaaatccattgataataaagcactgtatgatacattttctgcttttggtaac 874 Query: 629 attctttcatg 639 || |||||||| Sbjct: 875 atcctttcatg 885
>dbj|AP004195.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1434A12 Length = 151834 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Minus Query: 569 aatcttgacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaaac 628 ||||| ||||| || || ||||| ||||| || ||||| ||||||||||| ||||| ||| Sbjct: 13909 aatctggacaaatccattgataataaagcactgtatgatacattttctgcttttggtaac 13850 Query: 629 attctttcatg 639 || |||||||| Sbjct: 13849 atcctttcatg 13839
>dbj|AP001205.3| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1083B1, complete sequence Length = 155731 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Minus Query: 569 aatcttgacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaaac 628 ||||| ||||| || || ||||| ||||| || ||||| ||||||||||| ||||| ||| Sbjct: 126643 aatctggacaaatccattgataataaagcactgtatgatacattttctgcttttggtaac 126584 Query: 629 attctttcatg 639 || |||||||| Sbjct: 126583 atcctttcatg 126573
>gb|DQ336954.1| Glycine max cultivar Williams 82 clone BAC gmw-74i13, complete sequence Length = 173654 Score = 52.0 bits (26), Expect = 0.009 Identities = 56/66 (84%) Strand = Plus / Plus Query: 1007 aatggcaagaaatttgatgataaggaattatatgttggtagagctcagaagaagtctgaa 1066 ||||| ||||| ||||||| |||||| | |||||||| | ||| ||||| ||||||||| Sbjct: 10787 aatggaaagaattttgatggtaaggagtggtatgttggaaaagcccagaaaaagtctgaa 10846 Query: 1067 agggag 1072 |||||| Sbjct: 10847 agggag 10852
>gb|DQ455597.1| Phaseolus vulgaris poly-A binding protein mRNA, partial cds Length = 516 Score = 52.0 bits (26), Expect = 0.009 Identities = 44/50 (88%) Strand = Plus / Plus Query: 1373 gaagaaagaagagccaggctgcaggcgcagttttcgcaaatgcgtcctgt 1422 ||||| |||||||| ||||||||||| |||||| | |||||||| ||||| Sbjct: 163 gaagatagaagagctaggctgcaggctcagtttgctcaaatgcggcctgt 212
>gb|BC072110.1| Xenopus laevis hypothetical protein MGC79060, mRNA (cDNA clone MGC:79060 IMAGE:4885213), complete cds Length = 2709 Score = 52.0 bits (26), Expect = 0.009 Identities = 53/62 (85%) Strand = Plus / Plus Query: 575 gacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaaacattctt 634 |||||||| || ||||||||||| || || || ||||||||||| ||||| ||||| ||| Sbjct: 685 gacaagtccattgataacaaagccctgtacgatacattttctgcgtttggcaacatcctt 744 Query: 635 tc 636 || Sbjct: 745 tc 746
>gb|BC050949.1| Xenopus laevis, clone IMAGE:5542477, mRNA Length = 2367 Score = 52.0 bits (26), Expect = 0.009 Identities = 53/62 (85%) Strand = Plus / Plus Query: 575 gacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaaacattctt 634 |||||||| || ||||||||||| || || || ||||||||||| ||||| ||||| ||| Sbjct: 669 gacaagtccattgataacaaagccctgtacgatacattttctgcgtttggcaacatcctt 728 Query: 635 tc 636 || Sbjct: 729 tc 730
>gb|BC108462.1| Xenopus laevis hypothetical protein MGC79060, mRNA (cDNA clone MGC:130736 IMAGE:7976412), complete cds Length = 2736 Score = 52.0 bits (26), Expect = 0.009 Identities = 53/62 (85%) Strand = Plus / Plus Query: 575 gacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaaacattctt 634 |||||||| || ||||||||||| || || || ||||||||||| ||||| ||||| ||| Sbjct: 693 gacaagtccattgataacaaagccctgtacgatacattttctgcgtttggcaacatcctt 752 Query: 635 tc 636 || Sbjct: 753 tc 754
>gb|DQ336955.1| Glycine max cultivar Williams 82 clone BAC gmw1-52d3, complete sequence Length = 98675 Score = 50.1 bits (25), Expect = 0.037 Identities = 58/69 (84%) Strand = Plus / Plus Query: 1967 aaggttaccggtatgcttttggagatggaccaaactgaggttcttcatctaatcgagtca 2026 |||||||| ||||||||||| |||||||| ||| | ||||| | ||||| || |||||| Sbjct: 41 aaggttactggtatgcttttagagatggatcaacccgaggtattacatctgattgagtca 100 Query: 2027 cctgatgct 2035 || |||||| Sbjct: 101 ccagatgct 109
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 50.1 bits (25), Expect = 0.037 Identities = 25/25 (100%) Strand = Plus / Plus Query: 229 tccggcggctgttgctgcggcagca 253 ||||||||||||||||||||||||| Sbjct: 6039537 tccggcggctgttgctgcggcagca 6039561
>ref|XM_852324.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1), transcript variant 22 (LOC612751), mRNA Length = 2905 Score = 50.1 bits (25), Expect = 0.037 Identities = 46/53 (86%) Strand = Plus / Plus Query: 587 gataacaaagcgctatatgacacattttctgcctttggaaacattctttcatg 639 ||||| ||||| || ||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 878 gataataaagcactgtatgatacattttctgcttttggtaacatcctttcatg 930
>ref|XM_852241.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1), transcript variant 20 (LOC612751), mRNA Length = 2765 Score = 50.1 bits (25), Expect = 0.037 Identities = 46/53 (86%) Strand = Plus / Plus Query: 587 gataacaaagcgctatatgacacattttctgcctttggaaacattctttcatg 639 ||||| ||||| || ||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 878 gataataaagcactgtatgatacattttctgcttttggtaacatcctttcatg 930
>ref|XM_843771.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1), transcript variant 2 (LOC612751), mRNA Length = 2875 Score = 50.1 bits (25), Expect = 0.037 Identities = 46/53 (86%) Strand = Plus / Plus Query: 587 gataacaaagcgctatatgacacattttctgcctttggaaacattctttcatg 639 ||||| ||||| || ||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 878 gataataaagcactgtatgatacattttctgcttttggtaacatcctttcatg 930
>ref|XM_852159.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1), transcript variant 19 (LOC612751), mRNA Length = 2911 Score = 50.1 bits (25), Expect = 0.037 Identities = 46/53 (86%) Strand = Plus / Plus Query: 587 gataacaaagcgctatatgacacattttctgcctttggaaacattctttcatg 639 ||||| ||||| || ||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 878 gataataaagcactgtatgatacattttctgcttttggtaacatcctttcatg 930
>ref|XM_852119.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1), transcript variant 18 (LOC612751), mRNA Length = 2851 Score = 50.1 bits (25), Expect = 0.037 Identities = 46/53 (86%) Strand = Plus / Plus Query: 587 gataacaaagcgctatatgacacattttctgcctttggaaacattctttcatg 639 ||||| ||||| || ||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 878 gataataaagcactgtatgatacattttctgcttttggtaacatcctttcatg 930
>ref|XM_852073.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1), transcript variant 17 (LOC612751), mRNA Length = 2824 Score = 50.1 bits (25), Expect = 0.037 Identities = 46/53 (86%) Strand = Plus / Plus Query: 587 gataacaaagcgctatatgacacattttctgcctttggaaacattctttcatg 639 ||||| ||||| || ||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 878 gataataaagcactgtatgatacattttctgcttttggtaacatcctttcatg 930
>ref|XM_852031.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1), transcript variant 16 (LOC612751), mRNA Length = 3055 Score = 50.1 bits (25), Expect = 0.037 Identities = 46/53 (86%) Strand = Plus / Plus Query: 587 gataacaaagcgctatatgacacattttctgcctttggaaacattctttcatg 639 ||||| ||||| || ||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 878 gataataaagcactgtatgatacattttctgcttttggtaacatcctttcatg 930
>ref|XM_851989.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1), transcript variant 15 (LOC612751), mRNA Length = 2800 Score = 50.1 bits (25), Expect = 0.037 Identities = 46/53 (86%) Strand = Plus / Plus Query: 587 gataacaaagcgctatatgacacattttctgcctttggaaacattctttcatg 639 ||||| ||||| || ||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 878 gataataaagcactgtatgatacattttctgcttttggtaacatcctttcatg 930
>ref|XM_851946.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1), transcript variant 14 (LOC612751), mRNA Length = 2903 Score = 50.1 bits (25), Expect = 0.037 Identities = 46/53 (86%) Strand = Plus / Plus Query: 587 gataacaaagcgctatatgacacattttctgcctttggaaacattctttcatg 639 ||||| ||||| || ||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 878 gataataaagcactgtatgatacattttctgcttttggtaacatcctttcatg 930
>ref|XM_851905.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1), transcript variant 13 (LOC612751), mRNA Length = 2869 Score = 50.1 bits (25), Expect = 0.037 Identities = 46/53 (86%) Strand = Plus / Plus Query: 587 gataacaaagcgctatatgacacattttctgcctttggaaacattctttcatg 639 ||||| ||||| || ||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 878 gataataaagcactgtatgatacattttctgcttttggtaacatcctttcatg 930
>ref|XM_851864.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1), transcript variant 12 (LOC612751), mRNA Length = 2842 Score = 50.1 bits (25), Expect = 0.037 Identities = 46/53 (86%) Strand = Plus / Plus Query: 587 gataacaaagcgctatatgacacattttctgcctttggaaacattctttcatg 639 ||||| ||||| || ||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 878 gataataaagcactgtatgatacattttctgcttttggtaacatcctttcatg 930
>ref|XM_851825.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1), transcript variant 11 (LOC612751), mRNA Length = 2794 Score = 50.1 bits (25), Expect = 0.037 Identities = 46/53 (86%) Strand = Plus / Plus Query: 587 gataacaaagcgctatatgacacattttctgcctttggaaacattctttcatg 639 ||||| ||||| || ||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 878 gataataaagcactgtatgatacattttctgcttttggtaacatcctttcatg 930
>ref|XM_851782.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1), transcript variant 10 (LOC612751), mRNA Length = 2713 Score = 50.1 bits (25), Expect = 0.037 Identities = 46/53 (86%) Strand = Plus / Plus Query: 587 gataacaaagcgctatatgacacattttctgcctttggaaacattctttcatg 639 ||||| ||||| || ||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 878 gataataaagcactgtatgatacattttctgcttttggtaacatcctttcatg 930
>ref|XM_851702.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1), transcript variant 8 (LOC612751), mRNA Length = 2650 Score = 50.1 bits (25), Expect = 0.037 Identities = 46/53 (86%) Strand = Plus / Plus Query: 587 gataacaaagcgctatatgacacattttctgcctttggaaacattctttcatg 639 ||||| ||||| || ||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 878 gataataaagcactgtatgatacattttctgcttttggtaacatcctttcatg 930
>ref|XM_851660.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1), transcript variant 7 (LOC612751), mRNA Length = 2620 Score = 50.1 bits (25), Expect = 0.037 Identities = 46/53 (86%) Strand = Plus / Plus Query: 587 gataacaaagcgctatatgacacattttctgcctttggaaacattctttcatg 639 ||||| ||||| || ||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 878 gataataaagcactgtatgatacattttctgcttttggtaacatcctttcatg 930
>ref|XM_852602.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1), transcript variant 29 (LOC612751), mRNA Length = 2776 Score = 50.1 bits (25), Expect = 0.037 Identities = 46/53 (86%) Strand = Plus / Plus Query: 587 gataacaaagcgctatatgacacattttctgcctttggaaacattctttcatg 639 ||||| ||||| || ||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 749 gataataaagcactgtatgatacattttctgcttttggtaacatcctttcatg 801
>ref|XM_852562.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1), transcript variant 28 (LOC612751), mRNA Length = 2411 Score = 50.1 bits (25), Expect = 0.037 Identities = 46/53 (86%) Strand = Plus / Plus Query: 587 gataacaaagcgctatatgacacattttctgcctttggaaacattctttcatg 639 ||||| ||||| || ||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 384 gataataaagcactgtatgatacattttctgcttttggtaacatcctttcatg 436
>ref|XM_851615.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1), transcript variant 6 (LOC612751), mRNA Length = 2905 Score = 50.1 bits (25), Expect = 0.037 Identities = 46/53 (86%) Strand = Plus / Plus Query: 587 gataacaaagcgctatatgacacattttctgcctttggaaacattctttcatg 639 ||||| ||||| || ||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 878 gataataaagcactgtatgatacattttctgcttttggtaacatcctttcatg 930
>ref|XM_851582.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1), transcript variant 5 (LOC612751), mRNA Length = 2922 Score = 50.1 bits (25), Expect = 0.037 Identities = 46/53 (86%) Strand = Plus / Plus Query: 587 gataacaaagcgctatatgacacattttctgcctttggaaacattctttcatg 639 ||||| ||||| || ||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 878 gataataaagcactgtatgatacattttctgcttttggtaacatcctttcatg 930
>ref|XM_851536.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1), transcript variant 4 (LOC612751), mRNA Length = 1829 Score = 50.1 bits (25), Expect = 0.037 Identities = 46/53 (86%) Strand = Plus / Plus Query: 587 gataacaaagcgctatatgacacattttctgcctttggaaacattctttcatg 639 ||||| ||||| || ||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 878 gataataaagcactgtatgatacattttctgcttttggtaacatcctttcatg 930
>ref|XM_851497.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1), transcript variant 3 (LOC612751), mRNA Length = 3067 Score = 50.1 bits (25), Expect = 0.037 Identities = 46/53 (86%) Strand = Plus / Plus Query: 587 gataacaaagcgctatatgacacattttctgcctttggaaacattctttcatg 639 ||||| ||||| || ||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 878 gataataaagcactgtatgatacattttctgcttttggtaacatcctttcatg 930
>ref|NM_174568.2| Bos taurus poly(A) binding protein, cytoplasmic 1 (PABPC1), mRNA gb|BC102365.1| Bos taurus poly(A) binding protein, cytoplasmic 1, mRNA (cDNA clone MGC:127524 IMAGE:7949836), complete cds Length = 2878 Score = 50.1 bits (25), Expect = 0.037 Identities = 46/53 (86%) Strand = Plus / Plus Query: 587 gataacaaagcgctatatgacacattttctgcctttggaaacattctttcatg 639 ||||| ||||| || ||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 835 gataataaagcactgtatgatacattttctgcttttggtaacatcctttcatg 887
>gb|AC023682.4| Drosophila melanogaster X BAC RP98-7F10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179236 Score = 50.1 bits (25), Expect = 0.037 Identities = 25/25 (100%) Strand = Plus / Minus Query: 229 tccggcggctgttgctgcggcagca 253 ||||||||||||||||||||||||| Sbjct: 48205 tccggcggctgttgctgcggcagca 48181
>tpg|BK003045.1| TPA_inf: Drosophila melanogaster HDC17641 (HDC17641) gene, complete cds Length = 1819 Score = 50.1 bits (25), Expect = 0.037 Identities = 25/25 (100%) Strand = Plus / Plus Query: 229 tccggcggctgttgctgcggcagca 253 ||||||||||||||||||||||||| Sbjct: 1157 tccggcggctgttgctgcggcagca 1181
>emb|AJ401269.2|BTA401269 Bos taurus mRNA for polyadenylate-binding protein 1 Length = 1911 Score = 50.1 bits (25), Expect = 0.037 Identities = 46/53 (86%) Strand = Plus / Plus Query: 587 gataacaaagcgctatatgacacattttctgcctttggaaacattctttcatg 639 ||||| ||||| || ||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 331 gataataaagcactgtatgatacattttctgcttttggtaacatcctttcatg 383
>ref|XM_564448.1| Anopheles gambiae str. PEST ENSANGP00000026584 (ENSANGG00000019791), partial mRNA Length = 1848 Score = 50.1 bits (25), Expect = 0.037 Identities = 42/45 (93%), Gaps = 2/45 (4%) Strand = Plus / Plus Query: 407 tccctaggctacgcgtacgtcaactt-cagcagccctgccgatgc 450 ||||| |||||||||||||||||||| ||||||||| |||||||| Sbjct: 151 tccctcggctacgcgtacgtcaacttccagcagccc-gccgatgc 194
>ref|XM_309558.2| Anopheles gambiae str. PEST ENSANGP00000022280 (ENSANGG00000019791), partial mRNA Length = 1899 Score = 50.1 bits (25), Expect = 0.037 Identities = 42/45 (93%), Gaps = 2/45 (4%) Strand = Plus / Plus Query: 407 tccctaggctacgcgtacgtcaactt-cagcagccctgccgatgc 450 ||||| |||||||||||||||||||| ||||||||| |||||||| Sbjct: 124 tccctcggctacgcgtacgtcaacttccagcagccc-gccgatgc 167
>dbj|AK115501.1| Ciona intestinalis cDNA, clone:cieg056g12, full insert sequence Length = 1626 Score = 50.1 bits (25), Expect = 0.037 Identities = 28/29 (96%) Strand = Plus / Plus Query: 611 ttttctgcctttggaaacattctttcatg 639 ||||||||||| ||||||||||||||||| Sbjct: 668 ttttctgccttcggaaacattctttcatg 696
>gb|BT016789.1| Zea mays clone Contig622 mRNA sequence Length = 1208 Score = 48.1 bits (24), Expect = 0.14 Identities = 72/88 (81%) Strand = Plus / Plus Query: 1961 gctgccaaggttaccggtatgcttttggagatggaccaaactgaggttcttcatctaatc 2020 ||||| ||||| || || ||||||||||||||||| || || ||||| || || || || Sbjct: 705 gctgcaaaggtcactggaatgcttttggagatggatcagaccgaggtcctccacctgctc 764 Query: 2021 gagtcacctgatgctttgaagtctaagg 2048 ||||| ||||||||| | ||||| |||| Sbjct: 765 gagtcccctgatgctctcaagtccaagg 792
>gb|BC065540.1| Homo sapiens poly(A) binding protein, cytoplasmic 4 (inducible form), mRNA (cDNA clone MGC:70755 IMAGE:6061561), complete cds Length = 3030 Score = 48.1 bits (24), Expect = 0.14 Identities = 57/68 (83%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||||| || ||||||||||| | || ||||| || |||||||| ||| Sbjct: 1108 atcaagaacctggacaaatctatagataacaaggtactttatgatactttttctgctttt 1167 Query: 623 ggaaacat 630 |||||||| Sbjct: 1168 ggaaacat 1175
>dbj|AK135962.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420441N12 product:poly A binding protein, cytoplasmic 4, full insert sequence Length = 2465 Score = 48.1 bits (24), Expect = 0.14 Identities = 57/68 (83%) Strand = Plus / Plus Query: 563 atcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgccttt 622 |||||||| || ||| | || ||||| ||||| || || |||||||| || ||||||||| Sbjct: 476 atcaagaacctggacgaatccatagacaacaaggcactgtatgacactttctctgccttt 535 Query: 623 ggaaacat 630 |||||||| Sbjct: 536 ggaaacat 543
>gb|AC080162.7| Homo sapiens BAC clone RP11-400L8 from 2, complete sequence Length = 171653 Score = 48.1 bits (24), Expect = 0.14 Identities = 27/28 (96%) Strand = Plus / Minus Query: 816 ccaagttcaataatgtgtatgtaaagaa 843 ||||||||||||||||||| |||||||| Sbjct: 143092 ccaagttcaataatgtgtaggtaaagaa 143065
>ref|XM_310351.4| Anopheles gambiae str. PEST ENSANGP00000023706 (ENSANGG00000021247), partial mRNA Length = 1311 Score = 46.1 bits (23), Expect = 0.57 Identities = 26/27 (96%) Strand = Plus / Minus Query: 16 ttgggagcgaaatcctctcctcccatt 42 |||||| |||||||||||||||||||| Sbjct: 206 ttgggaccgaaatcctctcctcccatt 180
>ref|NM_105835.1| Arabidopsis thaliana PAB5 (POLY(A)-BINDING PROTEIN); RNA binding (PAB5) mRNA, complete cds Length = 2276 Score = 46.1 bits (23), Expect = 0.57 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1037 tatgttggtagagctcagaagaagtctgaaaggga 1071 ||||||||||| || |||||||||||||| ||||| Sbjct: 886 tatgttggtagggcacagaagaagtctgataggga 920
>gb|BC080020.1| Xenopus laevis embryonic poly(A) binding protein, mRNA (cDNA clone MGC:82273 IMAGE:4032449), complete cds Length = 2312 Score = 46.1 bits (23), Expect = 0.57 Identities = 35/39 (89%) Strand = Plus / Plus Query: 1340 aagcctctttacgtagcacttgcacaacgaaaggaagaa 1378 |||||||| ||||| |||||||||||| |||| |||||| Sbjct: 1207 aagcctctgtacgttgcacttgcacaaagaaaagaagaa 1245
>ref|XM_845364.1| PREDICTED: Canis familiaris similar to poly(A) binding protein, cytoplasmic 4 isoform 2 (LOC483825), mRNA Length = 2616 Score = 46.1 bits (23), Expect = 0.57 Identities = 26/27 (96%) Strand = Plus / Plus Query: 288 cgtccctgtacgtgggggatctggacg 314 |||||||||||||||||||||| |||| Sbjct: 29 cgtccctgtacgtgggggatctcgacg 55
>ref|NM_001019752.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC1F12.05), partial mRNA Length = 1134 Score = 46.1 bits (23), Expect = 0.57 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1850 gtttctagtggagcattggcatctgcacttgccaa 1884 |||||||||||||| || ||||||| ||||||||| Sbjct: 109 gtttctagtggagcgttagcatctggacttgccaa 143
>emb|Z69944.1|SPAC1F12 S.pombe chromosome I cosmid c1F12 Length = 14399 Score = 46.1 bits (23), Expect = 0.57 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1850 gtttctagtggagcattggcatctgcacttgccaa 1884 |||||||||||||| || ||||||| ||||||||| Sbjct: 5602 gtttctagtggagcgttagcatctggacttgccaa 5636
>emb|CR859795.1| Pongo pygmaeus mRNA; cDNA DKFZp469O2326 (from clone DKFZp469O2326) Length = 2347 Score = 46.1 bits (23), Expect = 0.57 Identities = 59/71 (83%) Strand = Plus / Plus Query: 569 aatcttgacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaaac 628 ||||| ||||| || || ||||| ||||| || ||||| ||||||||||| || || ||| Sbjct: 693 aatctggacaaatccattgataataaagcactgtatgatacattttctgctttcggtaac 752 Query: 629 attctttcatg 639 || |||||||| Sbjct: 753 atcctttcatg 763
>emb|CR859735.1| Pongo pygmaeus mRNA; cDNA DKFZp468C038 (from clone DKFZp468C038) Length = 2541 Score = 46.1 bits (23), Expect = 0.57 Identities = 41/47 (87%) Strand = Plus / Plus Query: 593 aaagcgctatatgacacattttctgcctttggaaacattctttcatg 639 ||||| || ||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 841 aaagcactgtatgatacattttctgcttttggtaacatcctttcatg 887
>gb|AF338225.1|AF338225 Xenopus laevis embryonic poly(A) binding protein (ePAB) mRNA, complete cds Length = 2197 Score = 46.1 bits (23), Expect = 0.57 Identities = 35/39 (89%) Strand = Plus / Plus Query: 1340 aagcctctttacgtagcacttgcacaacgaaaggaagaa 1378 |||||||| ||||| |||||||||||| |||| |||||| Sbjct: 1120 aagcctctgtacgttgcacttgcacaaagaaaagaagaa 1158
>gb|AC011807.4|AC011807 Arabidopsis thaliana chromosome I BAC F14J22 genomic sequence, complete sequence Length = 104679 Score = 46.1 bits (23), Expect = 0.57 Identities = 65/79 (82%) Strand = Plus / Minus Query: 567 agaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgcctttggaa 626 ||||||||||||| ||||| ||| ||||||| || | || |||||||| |||||||| Sbjct: 19237 agaatcttgacaaatcaattgatcacaaagcacttcacgagacattttcagcctttggtc 19178 Query: 627 acattctttcatgcaaagt 645 |||||| || |||||||| Sbjct: 19177 ccattctatcttgcaaagt 19159
>gb|AC012654.2|F14O23 Arabidopsis thaliana chromosome 1 BAC F14O23 sequence, complete sequence Length = 98471 Score = 46.1 bits (23), Expect = 0.57 Identities = 32/35 (91%) Strand = Plus / Minus Query: 1037 tatgttggtagagctcagaagaagtctgaaaggga 1071 ||||||||||| || |||||||||||||| ||||| Sbjct: 51654 tatgttggtagggcacagaagaagtctgataggga 51620
>emb|AL929284.12| Zebrafish DNA sequence from clone CH211-160H23 in linkage group 15, complete sequence Length = 179458 Score = 46.1 bits (23), Expect = 0.57 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1271 gttgcatttaaatcttctgaaga 1293 ||||||||||||||||||||||| Sbjct: 102724 gttgcatttaaatcttctgaaga 102746
>gb|M97657.1|ATHPABP Arabidopsis thaliana poly(A)-binding protein (PAB5) gene, complete cds Length = 3246 Score = 46.1 bits (23), Expect = 0.57 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1037 tatgttggtagagctcagaagaagtctgaaaggga 1071 ||||||||||| || |||||||||||||| ||||| Sbjct: 1292 tatgttggtagggcacagaagaagtctgataggga 1326
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1879 tgccaactctccgccggagcagcaac 1904 |||||||| ||||||||||||||||| Sbjct: 13131083 tgccaactatccgccggagcagcaac 13131108
>ref|XM_001069283.1| PREDICTED: Rattus norvegicus poly A binding protein, cytoplasmic 2 (predicted) (Pabpc2_predicted), mRNA Length = 2597 Score = 44.1 bits (22), Expect = 2.3 Identities = 43/50 (86%) Strand = Plus / Plus Query: 593 aaagcgctatatgacacattttctgcctttggaaacattctttcatgcaa 642 |||||||||||||| ||||| ||||| ||||| || || ||||| ||||| Sbjct: 530 aaagcgctatatgatacattctctgcttttggcaatatcctttcctgcaa 579
>ref|XM_225992.3| PREDICTED: Rattus norvegicus poly A binding protein, cytoplasmic 2 (predicted) (Pabpc2_predicted), mRNA Length = 2597 Score = 44.1 bits (22), Expect = 2.3 Identities = 43/50 (86%) Strand = Plus / Plus Query: 593 aaagcgctatatgacacattttctgcctttggaaacattctttcatgcaa 642 |||||||||||||| ||||| ||||| ||||| || || ||||| ||||| Sbjct: 530 aaagcgctatatgatacattctctgcttttggcaatatcctttcctgcaa 579
>ref|XR_003131.1| PREDICTED: Mus musculus similar to poly(A) binding protein, cytoplasmic 4 isoform 1 (LOC385748), mRNA Length = 2129 Score = 44.1 bits (22), Expect = 2.3 Identities = 55/66 (83%) Strand = Plus / Plus Query: 564 tcaagaatcttgacaagtcaatagataacaaagcgctatatgacacattttctgcctttg 623 ||||||| || ||||| || ||| | ||||| || || |||||||| || |||||||||| Sbjct: 554 tcaagaacctggacaaatctataaacaacaaggcactgtatgacactttctctgcctttg 613 Query: 624 gaaaca 629 |||||| Sbjct: 614 gaaaca 619
>gb|AC109186.7| Mus musculus chromosome 5, clone RP24-351E22, complete sequence Length = 174202 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2191 gtgcttggtgcttcagactctg 2212 |||||||||||||||||||||| Sbjct: 104124 gtgcttggtgcttcagactctg 104103
>gb|AY522611.1| Oreochromis mossambicus chromosome segregation ATPase-like mRNA, partial sequence Length = 767 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1086 aaagtttcgagaaaagcaataaagag 1111 ||||||||||||||||||| |||||| Sbjct: 426 aaagtttcgagaaaagcaaaaaagag 451
>gb|BC057481.1| Danio rerio cold inducible RNA binding protein, mRNA (cDNA clone MGC:66205 IMAGE:5914327), complete cds Length = 1927 Score = 44.1 bits (22), Expect = 2.3 Identities = 34/38 (89%) Strand = Plus / Plus Query: 948 gctttggatttgtgaactttgaaaatccggatgatgct 985 ||||||| ||||||| |||||||||||| || |||||| Sbjct: 346 gctttggctttgtgacctttgaaaatccagaagatgct 383
>gb|BC055643.1| Danio rerio cDNA clone IMAGE:5915478, **** WARNING: chimeric clone **** Length = 996 Score = 44.1 bits (22), Expect = 2.3 Identities = 34/38 (89%) Strand = Plus / Plus Query: 948 gctttggatttgtgaactttgaaaatccggatgatgct 985 ||||||| ||||||| |||||||||||| || |||||| Sbjct: 210 gctttggctttgtgacctttgaaaatccagaagatgct 247
>gb|AC139757.4| Mus musculus BAC clone RP23-440H11 from chromosome 18, complete sequence Length = 193847 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1365 aacgaaaggaagaaagaagagc 1386 |||||||||||||||||||||| Sbjct: 72975 aacgaaaggaagaaagaagagc 72996
>gb|AC098710.2| Mus musculus BAC clone RP23-1L15 from 5, complete sequence Length = 213811 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2191 gtgcttggtgcttcagactctg 2212 |||||||||||||||||||||| Sbjct: 163915 gtgcttggtgcttcagactctg 163936
>gb|AY688251.2| Schistosoma mansoni nuclear receptor 2DBD-beta (2DBD-beta) mRNA, complete cds Length = 5525 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 233 gcggctgttgctgcggcagcagctgc 258 ||||||||||| |||||||||||||| Sbjct: 3669 gcggctgttgcggcggcagcagctgc 3694
>dbj|AK222061.1| Arabidopsis thaliana mRNA for poly(A)-binding protein, complete cds, clone: RAFL22-79-P19 Length = 624 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1979 atgcttttggagatggaccaaactga 2004 |||||||||||||||||||| ||||| Sbjct: 297 atgcttttggagatggaccagactga 322
>ref|NM_073383.2| Caenorhabditis elegans F58B4.2 (F58B4.2) mRNA, complete cds Length = 270 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 860 actgaagataatctgaaagaat 881 |||||||||||||||||||||| Sbjct: 13 actgaagataatctgaaagaat 34
>emb|Z74038.1|CEF58B4 Caenorhabditis elegans Cosmid F58B4, complete sequence Length = 23861 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 860 actgaagataatctgaaagaat 881 |||||||||||||||||||||| Sbjct: 7864 actgaagataatctgaaagaat 7843
>gb|AF403738.1|AF403738 Culex nigripalpus baculovirus, complete genome Length = 108252 Score = 44.1 bits (22), Expect = 2.3 Identities = 28/30 (93%) Strand = Plus / Minus Query: 368 gtgtctgtgcgcgtgtgccgggacgtcaac 397 |||| ||||||||| ||||||||||||||| Sbjct: 71861 gtgtatgtgcgcgtttgccgggacgtcaac 71832
>emb|BX511306.10| Zebrafish DNA sequence from clone DKEY-219L12 in linkage group 19, complete sequence Length = 223646 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 703 cgaatcagcacaaaatgctatt 724 |||||||||||||||||||||| Sbjct: 121699 cgaatcagcacaaaatgctatt 121678
>emb|BX649404.8| Zebrafish DNA sequence from clone CH211-285O15 in linkage group 22, complete sequence Length = 154434 Score = 44.1 bits (22), Expect = 2.3 Identities = 34/38 (89%) Strand = Plus / Plus Query: 948 gctttggatttgtgaactttgaaaatccggatgatgct 985 ||||||| ||||||| |||||||||||| || |||||| Sbjct: 141480 gctttggctttgtgacctttgaaaatccagaagatgct 141517
>gb|AY030359.1| Anemia phyllitidis polyadenylated mRNA-binding protein 2 (Pab2) mRNA, partial cds Length = 1609 Score = 44.1 bits (22), Expect = 2.3 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1316 atgaatggtaaaatggttggcagtaagcct 1345 |||||||| ||||||||||| ||||||||| Sbjct: 577 atgaatgggaaaatggttgggagtaagcct 606 Score = 44.1 bits (22), Expect = 2.3 Identities = 70/86 (81%) Strand = Plus / Plus Query: 1946 ctggagcatgatcaggctgccaaggttaccggtatgcttttggagatggaccaaactgag 2005 |||||||||||||| || | ||| || || ||||||||| | || |||||||| || ||| Sbjct: 1207 ctggagcatgatcacgcgggcaaagtcacgggtatgcttctagaaatggaccagacagag 1266 Query: 2006 gttcttcatctaatcgagtcacctga 2031 ||||| || || || ||||| ||||| Sbjct: 1267 gttctacacctcattgagtcgcctga 1292
>emb|BX000995.12| Mouse DNA sequence from clone RP23-106K17 on chromosome 11 Contains a protease pseuodogene, complete sequence Length = 189417 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 392 gtcaacaccaggatgtccctag 413 |||||||||||||||||||||| Sbjct: 27160 gtcaacaccaggatgtccctag 27139
>gb|AC080007.26| Homo sapiens 3 BAC RP11-529F4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 168551 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2270 tatatttgtttaaatattgaga 2291 |||||||||||||||||||||| Sbjct: 76769 tatatttgtttaaatattgaga 76748
>gb|AC011763.6|AC011763 Drosophila melanogaster, chromosome 3R, region 90A-90A, BAC clone BACR48C05, complete sequence Length = 164450 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1879 tgccaactctccgccggagcagcaac 1904 |||||||| ||||||||||||||||| Sbjct: 75465 tgccaactatccgccggagcagcaac 75490
>emb|BX828392.1|CNS0A2YR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH83ZH02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 723 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1979 atgcttttggagatggaccaaactga 2004 |||||||||||||||||||| ||||| Sbjct: 421 atgcttttggagatggaccagactga 446
>ref|NM_200017.1| Danio rerio cold inducible RNA binding protein (cirbp), mRNA gb|BC048027.1| Danio rerio cold inducible RNA binding protein, mRNA (cDNA clone MGC:55300 IMAGE:2600318), complete cds Length = 1626 Score = 44.1 bits (22), Expect = 2.3 Identities = 34/38 (89%) Strand = Plus / Plus Query: 948 gctttggatttgtgaactttgaaaatccggatgatgct 985 ||||||| ||||||| |||||||||||| || |||||| Sbjct: 213 gctttggctttgtgacctttgaaaatccagaagatgct 250 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 438,284,922 Number of extensions: 24467158 Number of successful extensions: 152506 Number of sequences better than 10.0: 370 Number of HSP's gapped: 152431 Number of HSP's successfully gapped: 548 Length of query: 2328 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2305 Effective length of database: 18,503,978,556 Effective search space: 42651670571580 Effective search space used: 42651670571580 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)