>Q86TW2:ADCK1_HUMAN Uncharacterized aarF domain-containing protein kinase 1 precursor -|
Homo sapiens (Human)
Length = 530
Score = 50.8 bits (120), Expect(2) = 4e-09
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Frame = +2
Query: 1793 QVRGTIEKELGKPMSELFATFDLDPLATASVSSMPPK*TILSLV*IRNMLK*MNTS*QIA 1972
++R I ++LGK + +LF +FD PL TAS +A
Sbjct: 136 EIRQVIREDLGKEIHDLFQSFDDTPLGTAS----------------------------LA 167
Query: 1973 QVHRATLEDGREVVVKVQHDGIKE------IILEVLFFSVNSV 2083
QVH+A L DGR V VKVQH ++ +++EVL +V +
Sbjct: 168 QVHKAVLHDGRTVAVKVQHPKVRAQSSKDILLMEVLVLAVKQL 210
Score = 32.7 bits (73), Expect(2) = 4e-09
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 2179 PQYDFNPMIDEWCKEAPKELDFNHEAENTRTVSKNL 2286
P+++F ++DE K P ELDF +E N VS+ L
Sbjct: 212 PEFEFMWLVDEAKKNLPLELDFLNEGRNAEKVSQML 247
Score = 56.6 bits (135), Expect = 6e-07
Identities = 20/61 (32%), Positives = 43/61 (70%)
Frame = +3
Query: 2460 STEKILILEYMDGIRLHDNDSLEEYGVDKKKLVEEITRAYAHQIYIDGFFNGDPHPGTLI 2639
STE++L++E++DG +++D D +E +D ++ + + Y+ I+++GF + DPHPG ++
Sbjct: 263 STERVLLMEFVDGGQVNDRDYMERNKIDVNEISRHLGKMYSEMIFVNGFVHCDPHPGNVL 322
Query: 2640 L 2642
+
Sbjct: 323 V 323
Score = 43.9 bits (102), Expect = 0.004
Identities = 21/65 (32%), Positives = 34/65 (52%)
Frame = +2
Query: 1427 KKHAIWAKTHERNARRVLNLMIELEGLWVKMGQYLSTRADVLPEPYIEVLKQLQDSLPPR 1606
K ++ + H R+ARR+ L G ++K+GQ+L +LPE Y LK L P
Sbjct: 73 KSWPVFLQVHLRSARRLCELCCANRGTFIKVGQHLGALDYLLPEEYTSTLKVLHSQAPQS 132
Query: 1607 PLEEV 1621
++E+
Sbjct: 133 SMQEI 137
>Q5M7P6:ADCK1_XENTR Uncharacterized aarF domain-containing protein kinase 1 precursor -|
Xenopus tropicalis (Western clawed frog) (Silurana
tropicalis)
Length = 523
Score = 49.3 bits (116), Expect(2) = 2e-08
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Frame = +2
Query: 1808 IEKELGKPMSELFATFDLDPLATASVSSMPPK*TILSLV*IRNMLK*MNTS*QIAQVHRA 1987
I ++LGK +SE+F F+ PL AS +AQVHRA
Sbjct: 134 IREDLGKEISEVFVEFEEKPLGAAS----------------------------LAQVHRA 165
Query: 1988 TLEDGREVVVKVQHDGIKE------IILEVLFFSVNSV 2083
L+DGR+V VKVQH ++ +++EVL +V +
Sbjct: 166 VLQDGRKVAVKVQHPKVQAQSARDILLMEVLLHAVKKI 203
Score = 32.0 bits (71), Expect(2) = 2e-08
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 2179 PQYDFNPMIDEWCKEAPKELDFNHEAENTRTVSKNLS 2289
PQ++F +I+E K P ELDF +E N +S +S
Sbjct: 205 PQFEFMWLIEEAKKNLPLELDFENEGRNAEKMSAIVS 241
Score = 53.5 bits (127), Expect = 5e-06
Identities = 24/92 (26%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +3
Query: 2460 STEKILILEYMDGIRLHDNDSLEEYGVDKKKLVEEITRAYAHQIYIDGFFNGDPHPGTLI 2639
ST+++L++EYM+G +++D + ++ +D ++ + + Y+ I++ GF + DPHPG ++
Sbjct: 256 STKRVLVMEYMEGGQVNDREYMKRNQIDINQVARALGQLYSEMIFVHGFVHCDPHPGNVL 315
Query: 2640 LCFFRQILCHIIYVLQY-FHWISLCCFHIDLC 2732
+ + L I +L + + + F +D C
Sbjct: 316 VRQNPETLVPEIILLDHGLYQVLTESFRLDYC 347
>Q6INL7:ADCK1_XENLA Uncharacterized aarF domain-containing protein kinase 1 precursor -|
Xenopus laevis (African clawed frog)
Length = 520
Score = 48.9 bits (115), Expect(2) = 2e-08
Identities = 33/98 (33%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Frame = +2
Query: 1808 IEKELGKPMSELFATFDLDPLATASVSSMPPK*TILSLV*IRNMLK*MNTS*QIAQVHRA 1987
I ++LGK +SE+F F+ PL AS +AQVHRA
Sbjct: 134 IREDLGKEISEVFEEFEKTPLGAAS----------------------------LAQVHRA 165
Query: 1988 TLEDGREVVVKVQHDGIKE------IILEVLFFSVNSV 2083
L+DGR+V VKVQH ++ +I+EVL V +
Sbjct: 166 VLQDGRKVAVKVQHPKVQAQSSRDILIMEVLLHVVKKI 203
Score = 32.3 bits (72), Expect(2) = 2e-08
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 2179 PQYDFNPMIDEWCKEAPKELDFNHEAENTRTVSKNLS 2289
PQ++F +I+E K P ELDF +E N +S +S
Sbjct: 205 PQFEFMWLIEEAKKNLPLELDFQNEGRNAEKMSSIVS 241
Score = 53.9 bits (128), Expect = 4e-06
Identities = 19/61 (31%), Positives = 42/61 (68%)
Frame = +3
Query: 2460 STEKILILEYMDGIRLHDNDSLEEYGVDKKKLVEEITRAYAHQIYIDGFFNGDPHPGTLI 2639
ST+++L++EYM+G +++D + ++ +D K+ + + Y+ I++ GF + DPHPG ++
Sbjct: 256 STKRVLVMEYMEGGQVNDREYMKRNQIDVNKVSHALGKLYSEMIFVHGFVHCDPHPGNVL 315
Query: 2640 L 2642
+
Sbjct: 316 V 316
>Q9D0L4:ADCK1_MOUSE Uncharacterized aarF domain-containing protein kinase 1 precursor -|
Mus musculus (Mouse)
Length = 525
Score = 49.7 bits (117), Expect(2) = 6e-08
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 6/106 (5%)
Frame = +2
Query: 1793 QVRGTIEKELGKPMSELFATFDLDPLATASVSSMPPK*TILSLV*IRNMLK*MNTS*QIA 1972
+VR I ++LGK + +LF +FD PL AS +A
Sbjct: 129 EVRQVIREDLGKEIHDLFLSFDDTPLGAAS----------------------------LA 160
Query: 1973 QVHRATLEDGREVVVKVQHDGIKE------IILEVLFFSVNSVL*D 2092
QVH+A L DGR V VKVQH ++ +++EVL +V + D
Sbjct: 161 QVHKAVLHDGRTVAVKVQHPKVQAQSSKDILLMEVLVLAVKQLFPD 206
Score = 30.0 bits (66), Expect(2) = 6e-08
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 2179 PQYDFNPMIDEWCKEAPKELDFNHEAENTRTVSKNL 2286
P ++F ++DE K P ELDF +E N V+ L
Sbjct: 205 PDFEFMWLVDEAKKNLPLELDFLNEGRNAEKVAHML 240
Score = 49.3 bits (116), Expect = 9e-05
Identities = 17/61 (27%), Positives = 43/61 (70%)
Frame = +3
Query: 2460 STEKILILEYMDGIRLHDNDSLEEYGVDKKKLVEEITRAYAHQIYIDGFFNGDPHPGTLI 2639
ST+++L++E+++G +++D +E+ +D ++ + + Y+ I+++GF + DPHPG ++
Sbjct: 256 STKRVLLMEFVEGGQVNDRAYMEKNQIDVNEISCHLGKMYSEMIFVNGFVHCDPHPGNVL 315
Query: 2640 L 2642
+
Sbjct: 316 V 316
Score = 43.1 bits (100), Expect = 0.007
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +2
Query: 1445 AKTHERNARRVLNLMIELEGLWVKMGQYLSTRADVLPEPYIEVLKQLQDSLPPRPLEEV 1621
++ H R+ARR+ L G ++K+GQ+L +LPE Y LK L P ++EV
Sbjct: 72 SQVHLRSARRLFELCCANRGTFIKVGQHLGALDYLLPEEYTSTLKVLHSQAPQSSMQEV 130
>Q46189:YHG1_CLOPA Uncharacterized protein in hydrogenase 1 5'region - Clostridium|
pasteurianum
Length = 530
Score = 58.9 bits (141), Expect = 1e-07
Identities = 25/60 (41%), Positives = 43/60 (71%)
Frame = +3
Query: 2463 TEKILILEYMDGIRLHDNDSLEEYGVDKKKLVEEITRAYAHQIYIDGFFNGDPHPGTLIL 2642
TEKI+++E + GI++ + L G D ++L +++T +Y Q++ DGFF+GDPHPG L++
Sbjct: 213 TEKIIVMEKIVGIKIDNLKKLLNEGYDLEELGKKLTLSYFKQVFQDGFFHGDPHPGNLLI 272
Score = 44.7 bits (104), Expect = 0.002
Identities = 20/37 (54%), Positives = 29/37 (78%)
Frame = +2
Query: 1493 ELEGLWVKMGQYLSTRADVLPEPYIEVLKQLQDSLPP 1603
EL ++K+GQ LSTR D+LP PYI+ L +LQ+++PP
Sbjct: 42 ELGPTFIKIGQILSTRPDLLPLPYIKELSKLQNNVPP 78
Score = 37.7 bits (86), Expect = 0.28
Identities = 25/87 (28%), Positives = 36/87 (41%)
Frame = +2
Query: 1790 VQVRGTIEKELGKPMSELFATFDLDPLATASVSSMPPK*TILSLV*IRNMLK*MNTS*QI 1969
+ + +EL + F FD P+ +AS I
Sbjct: 82 IDIENLFFEELSSTIDNTFLYFDKTPIGSAS----------------------------I 113
Query: 1970 AQVHRATLEDGREVVVKVQHDGIKEII 2050
AQVH A L+DGR V+VK+Q GI E++
Sbjct: 114 AQVHDAILKDGRFVIVKIQRPGIAEMM 140
>P73627:Y1770_SYNY3 Uncharacterized protein sll1770 - Synechocystis sp. (strain PCC 6803)|
Length = 585
Score = 58.9 bits (141), Expect = 1e-07
Identities = 29/61 (47%), Positives = 41/61 (67%)
Frame = +3
Query: 2454 YQSTEKILILEYMDGIRLHDNDSLEEYGVDKKKLVEEITRAYAHQIYIDGFFNGDPHPGT 2633
Y ST+ IL LEY+ GI++ D+LE G+++K+L + RAY Q+ GFF+ DPHPG
Sbjct: 264 YTSTQ-ILTLEYLPGIKISHYDALEAAGLERKELAQLGARAYLFQLLNHGFFHADPHPGN 322
Query: 2634 L 2636
L
Sbjct: 323 L 323
Score = 51.6 bits (122), Expect = 2e-05
Identities = 31/85 (36%), Positives = 43/85 (50%)
Frame = +2
Query: 1793 QVRGTIEKELGKPMSELFATFDLDPLATASVSSMPPK*TILSLV*IRNMLK*MNTS*QIA 1972
Q G IE+ELGKP+++L+ +FD PLA AS +
Sbjct: 135 QAAGIIEEELGKPIAKLYRSFDPVPLAAAS----------------------------LG 166
Query: 1973 QVHRATLEDGREVVVKVQHDGIKEI 2047
QVH+A L G +VVVKVQ G+K++
Sbjct: 167 QVHKAQLHTGEDVVVKVQRPGLKKL 191
Score = 42.4 bits (98), Expect = 0.012
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = +2
Query: 1460 RNARRVLNLMIELEGLWVKMGQYLSTRADVLPEPYIEVLKQLQDSLPPRPLEE 1618
R A+ + ++ L ++K+GQ STR+D+ P Y+E L +LQD +P E+
Sbjct: 83 RQAKWIRENLLSLGPTFIKVGQLFSTRSDLFPAEYVEELSKLQDEVPAFSYEQ 135
>Q55884:Y095_SYNY3 Uncharacterized protein sll0095 - Synechocystis sp. (strain PCC 6803)|
Length = 567
Score = 55.8 bits (133), Expect = 1e-06
Identities = 23/59 (38%), Positives = 37/59 (62%)
Frame = +3
Query: 2460 STEKILILEYMDGIRLHDNDSLEEYGVDKKKLVEEITRAYAHQIYIDGFFNGDPHPGTL 2636
+T +L LEY+ GI++ D +LE G++ +++ AY Q+ +DGFF DPHPG +
Sbjct: 242 TTRMVLTLEYLPGIKVDDRQALETAGINLDLVIQTGICAYLKQLLVDGFFQSDPHPGNM 300
Score = 49.3 bits (116), Expect = 9e-05
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = +2
Query: 1445 AKTHERNARRVLNLMIELEGLWVKMGQYLSTRADVLPEPYIEVLKQLQDSLPP 1603
A+ R A+ ++ ++ L ++K+GQ LSTRAD++P YIE QLQD +PP
Sbjct: 51 AQRRYRRAQWLVQQLLYLGPTFIKIGQSLSTRADIIPAEYIEAFTQLQDRVPP 103
Score = 40.0 bits (92), Expect(2) = 0.005
Identities = 27/86 (31%), Positives = 37/86 (43%)
Frame = +2
Query: 1793 QVRGTIEKELGKPMSELFATFDLDPLATASVSSMPPK*TILSLV*IRNMLK*MNTS*QIA 1972
Q IE+EL + E+F F++ PLA+AS +
Sbjct: 108 QAIAVIEQELHGAIDEIFQQFEVTPLASAS----------------------------LG 139
Query: 1973 QVHRATLEDGREVVVKVQHDGIKEII 2050
QVHRA L G VVVKVQ G+ ++
Sbjct: 140 QVHRAVLPTGEAVVVKVQRPGLDSLL 165
Score = 22.7 bits (47), Expect(2) = 0.005
Identities = 14/63 (22%), Positives = 26/63 (41%)
Frame = +1
Query: 2101 LLLQLFICGQDLKNAKSLIEWIAWAEPQYDFNPMIDEWCKEAPKELDFNHEAENTRTVSK 2280
L L + Q L+ AK + +Y+ + E+ E+D+ HE +N +
Sbjct: 165 LNLDFELLHQTLRLAKRWLPGFRRLAQKYEIEAIYQEFFSLLFLEIDYIHEGKNAERFRQ 224
Query: 2281 NLS 2289
N +
Sbjct: 225 NFA 227
>Q5ZMT7:ADCK1_CHICK Uncharacterized aarF domain-containing protein kinase 1 precursor -|
Gallus gallus (Chicken)
Length = 519
Score = 55.1 bits (131), Expect = 2e-06
Identities = 19/61 (31%), Positives = 43/61 (70%)
Frame = +3
Query: 2460 STEKILILEYMDGIRLHDNDSLEEYGVDKKKLVEEITRAYAHQIYIDGFFNGDPHPGTLI 2639
ST ++L++E+M+G +++D +E+ G+D ++ + + Y+ I+++GF + DPHPG ++
Sbjct: 253 STRRVLLMEFMEGGQVNDKAYMEKNGIDVNEISRNLGKLYSEMIFVNGFVHCDPHPGNVL 312
Query: 2640 L 2642
+
Sbjct: 313 V 313
Score = 48.5 bits (114), Expect = 2e-04
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 6/108 (5%)
Frame = +2
Query: 1787 RVQVRGTIEKELGKPMSELFATFDLDPLATASVSSMPPK*TILSLV*IRNMLK*MNTS*Q 1966
R ++ I ++LGK + ELF +F+ PL AS
Sbjct: 124 RQEIEQVIREDLGKEIKELFVSFEDTPLGAAS---------------------------- 155
Query: 1967 IAQVHRATLEDGREVVVKVQHDGIKE------IILEVLFFSVNSVL*D 2092
+AQVH+A L+DGR V VK+QH ++ ++EVL V + D
Sbjct: 156 LAQVHKAVLQDGRTVAVKIQHPKVQAQSSKDIFLMEVLLLVVKQIFPD 203
Score = 38.5 bits (88), Expect = 0.17
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +2
Query: 1445 AKTHERNARRVLNLMIELEGLWVKMGQYLSTRADVLPEPYIEVLKQLQDSLPPRPLEEV 1621
++ H R+A R+ L G ++K+GQ+L +LPE Y LK L P +E+
Sbjct: 69 SQVHLRSAERLRELCCANRGTFIKVGQHLGALDYLLPEEYTRTLKVLHSQAPQSTRQEI 127
>P73577:Y889_SYNY3 Uncharacterized protein slr0889 - Synechocystis sp. (strain PCC 6803)|
Length = 408
Score = 52.0 bits (123), Expect = 1e-05
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Frame = +3
Query: 2460 STEKILILEYMDGIRLHDND-----SLEEYGVDKKKLVEEITRAYAHQIYIDGFFNGDPH 2624
+ +K L+LE++DG+ + D S ++ KK++ + RA+ Q+Y+DGFF+ DPH
Sbjct: 227 TNQKFLVLEWLDGVPILTADLTQPPSDKDIAEKKKEITTLLFRAFFQQLYVDGFFHADPH 286
Query: 2625 PGTL 2636
PG +
Sbjct: 287 PGNI 290
Score = 46.6 bits (109), Expect = 6e-04
Identities = 20/42 (47%), Positives = 29/42 (69%)
Frame = +2
Query: 1484 LMIELEGLWVKMGQYLSTRADVLPEPYIEVLKQLQDSLPPRP 1609
+++EL ++K+GQ LSTR D+LP YI L LQ ++PP P
Sbjct: 49 ILVELGPFYIKLGQLLSTRPDLLPPRYINALTALQSNVPPLP 90
Score = 34.7 bits (78), Expect(2) = 8e-04
Identities = 20/85 (23%), Positives = 34/85 (40%)
Frame = +2
Query: 1796 VRGTIEKELGKPMSELFATFDLDPLATASVSSMPPK*TILSLV*IRNMLK*MNTS*QIAQ 1975
+ +++E +P+ E F + +P+A S I Q
Sbjct: 94 IEDLLQREFPQPLGETFQEIESEPIAAGS----------------------------IGQ 125
Query: 1976 VHRATLEDGREVVVKVQHDGIKEII 2050
+HRA L+ G V +KV+ GI I+
Sbjct: 126 IHRAVLQSGETVAIKVKRPGIDVIV 150
Score = 30.8 bits (68), Expect(2) = 8e-04
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +1
Query: 2119 ICGQDLKNAKSLIEWIAWAE--PQYDFNPMIDEWCKEAPKELDFNHEAENTRTVSKNLSR 2292
I QD K + E +A E YD + DE+ + EL+F+ EA T + NL++
Sbjct: 149 IVEQDSLLIKDVAELLALTEFGQNYDIVKLADEFTQTVKAELNFDTEAAYTNNLRTNLAK 208
Query: 2293 KT 2298
T
Sbjct: 209 TT 210
>Q8Y275:UBIB_RALSO Probable ubiquinone biosynthesis protein ubiB - Ralstonia|
solanacearum (Pseudomonas solanacearum)
Length = 525
Score = 51.2 bits (121), Expect = 2e-05
Identities = 21/60 (35%), Positives = 35/60 (58%)
Frame = +3
Query: 2463 TEKILILEYMDGIRLHDNDSLEEYGVDKKKLVEEITRAYAHQIYIDGFFNGDPHPGTLIL 2642
T ++ ++E M G+R+ D L GVD KL + + Q++ DGFF+ D HPG +++
Sbjct: 235 TSEVFVMERMHGVRVSHADELRAAGVDTHKLARDGVEIFFTQVFRDGFFHADMHPGNILV 294
Score = 44.3 bits (103), Expect = 0.003
Identities = 32/85 (37%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Frame = +2
Query: 1808 IEKELGKPMSELFATFDLDPLATASVSSMPPK*TILSLV*IRNMLK*MNTS*QIAQVHRA 1987
+E+ LGKP+S LF FD P+A+AS IAQVH A
Sbjct: 105 VERSLGKPLSALFHRFDHHPVASAS----------------------------IAQVHFA 136
Query: 1988 TL----EDGREVVVKVQHDGIKEII 2050
TL +DGREV VKV G+ +I
Sbjct: 137 TLRGGPDDGREVAVKVLRPGMLPVI 161
Score = 40.0 bits (92), Expect = 0.057
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Frame = +2
Query: 1439 IWAKTHERNARRV----LNLMIELEG-LWVKMGQYLSTRADVLPEPYIEVLKQLQDSLPP 1603
+W T R R L L +E G ++VK GQ LSTR D+LP + L +LQD +PP
Sbjct: 36 VWVLTLGRRQTRPRGERLRLALEQLGPIFVKFGQVLSTRRDLLPPDVADELAKLQDRVPP 95
>Q3MIX3:ADCK5_HUMAN Uncharacterized aarF domain-containing protein kinase 5 - Homo|
sapiens (Human)
Length = 580
Score = 50.4 bits (119), Expect = 4e-05
Identities = 21/80 (26%), Positives = 46/80 (57%)
Frame = +3
Query: 2403 VFANHVNWDHHLTHSFLYQSTEKILILEYMDGIRLHDNDSLEEYGVDKKKLVEEITRAYA 2582
V V+WD +S++++L ++ G +++D +++ G+ + E++ +A+A
Sbjct: 298 VVVPRVHWD---------KSSKRVLTADFCAGCKVNDVEAIRSQGLAVHDIAEKLIKAFA 348
Query: 2583 HQIYIDGFFNGDPHPGTLIL 2642
QI+ GF + DPHPG +++
Sbjct: 349 EQIFYTGFIHSDPHPGNVLV 368
Score = 34.7 bits (78), Expect = 2.4
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +2
Query: 1439 IWAKTHERNARRVLNLMIELEGLWVKMGQYLSTRADVLPEPYIEVLKQLQDSLPPRPLEE 1618
+ + H+R A ++ I GL+VK+GQ L + +LP Y L+ L+D R +E
Sbjct: 122 VMSACHQRAADALVAGAISNGGLYVKLGQGLCSFNHLLPPEYTRTLRVLEDRALKRGFQE 181
Query: 1619 V 1621
V
Sbjct: 182 V 182
Score = 34.7 bits (78), Expect = 2.4
Identities = 23/69 (33%), Positives = 29/69 (42%)
Frame = +2
Query: 1838 ELFATFDLDPLATASVSSMPPK*TILSLV*IRNMLK*MNTS*QIAQVHRATLEDGREVVV 2017
ELF FD P+A AS +AQVHRA L DG V V
Sbjct: 196 ELFQEFDYQPIAAAS----------------------------LAQVHRAKLHDGTSVAV 227
Query: 2018 KVQHDGIKE 2044
KVQ+ +++
Sbjct: 228 KVQYIDLRD 236
>Q9K0N0:UBIB_NEIMB Probable ubiquinone biosynthesis protein ubiB - Neisseria|
meningitidis serogroup B
Length = 503
Score = 48.1 bits (113), Expect = 2e-04
Identities = 21/60 (35%), Positives = 35/60 (58%)
Frame = +3
Query: 2463 TEKILILEYMDGIRLHDNDSLEEYGVDKKKLVEEITRAYAHQIYIDGFFNGDPHPGTLIL 2642
T +L +E+MDG + D L+ G+D KL + + Q++ DGFF+ D HPG +++
Sbjct: 232 TSDVLTIEWMDGTPVSDIAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPGNILV 291
Score = 41.2 bits (95), Expect = 0.026
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = +2
Query: 1412 WVSAVKKHAIWAKTHERNARRVLNLMIELEGL---WVKMGQYLSTRADVLPEPYIEVLKQ 1582
W+ A+ K + + +N + L + LE L ++K GQ LSTR D++P Y L +
Sbjct: 31 WICALLK-MMPQSSKLKNEPPAVRLRLALESLGPIFIKFGQVLSTRPDLIPHDYAVELAK 89
Query: 1583 LQDSLPP 1603
LQD +PP
Sbjct: 90 LQDKVPP 96
Score = 40.0 bits (92), Expect = 0.057
Identities = 26/84 (30%), Positives = 38/84 (45%)
Frame = +2
Query: 1799 RGTIEKELGKPMSELFATFDLDPLATASVSSMPPK*TILSLV*IRNMLK*MNTS*QIAQV 1978
R IEK LG+ + +L+A F+ +P+A+AS IAQV
Sbjct: 103 REQIEKSLGQSIEKLYAEFETEPIASAS----------------------------IAQV 134
Query: 1979 HRATLEDGREVVVKVQHDGIKEII 2050
H+A L G +V VKV + +I
Sbjct: 135 HKARLHSGEQVAVKVLRPNLLPVI 158
>Q9JVQ5:UBIB_NEIMA Probable ubiquinone biosynthesis protein ubiB - Neisseria|
meningitidis serogroup A
Length = 503
Score = 47.8 bits (112), Expect = 3e-04
Identities = 21/60 (35%), Positives = 35/60 (58%)
Frame = +3
Query: 2463 TEKILILEYMDGIRLHDNDSLEEYGVDKKKLVEEITRAYAHQIYIDGFFNGDPHPGTLIL 2642
T +L +E+MDG + D L+ G+D KL + + Q++ DGFF+ D HPG +++
Sbjct: 232 TSDVLTIEWMDGTPVADIAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPGNILV 291
Score = 41.2 bits (95), Expect = 0.026
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = +2
Query: 1412 WVSAVKKHAIWAKTHERNARRVLNLMIELEGL---WVKMGQYLSTRADVLPEPYIEVLKQ 1582
W+ A+ K + + +N + L + LE L ++K GQ LSTR D++P Y L +
Sbjct: 31 WICALLK-MMPQSSKLKNEPPAVRLRLALESLGPIFIKFGQVLSTRPDLIPHDYAVELAK 89
Query: 1583 LQDSLPP 1603
LQD +PP
Sbjct: 90 LQDKVPP 96
Score = 38.9 bits (89), Expect = 0.13
Identities = 26/84 (30%), Positives = 37/84 (44%)
Frame = +2
Query: 1799 RGTIEKELGKPMSELFATFDLDPLATASVSSMPPK*TILSLV*IRNMLK*MNTS*QIAQV 1978
R IEK LG+ + +L+A F+ +P+A+AS IAQV
Sbjct: 103 REQIEKSLGQSIEKLYAEFETEPIASAS----------------------------IAQV 134
Query: 1979 HRATLEDGREVVVKVQHDGIKEII 2050
H+A L G V VKV + +I
Sbjct: 135 HKARLHSGERVAVKVLRPNLLPLI 158
>Q80V03:ADCK5_MOUSE Uncharacterized aarF domain-containing protein kinase 5 - Mus|
musculus (Mouse)
Length = 582
Score = 47.8 bits (112), Expect = 3e-04
Identities = 18/75 (24%), Positives = 46/75 (61%)
Frame = +3
Query: 2418 VNWDHHLTHSFLYQSTEKILILEYMDGIRLHDNDSLEEYGVDKKKLVEEITRAYAHQIYI 2597
V+WD +S++++L ++ +G +++D + ++ G+ + + +++ + +A QI+
Sbjct: 303 VHWD---------RSSKRVLTADFCNGCKVNDMEGIKSQGLAVQDVAKKLIQTFAEQIFH 353
Query: 2598 DGFFNGDPHPGTLIL 2642
GF + DPHPG +++
Sbjct: 354 TGFIHSDPHPGNVLV 368
Score = 37.7 bits (86), Expect = 0.28
Identities = 26/80 (32%), Positives = 41/80 (51%)
Frame = +2
Query: 1382 CKQAVQKRVQWVSAVKKHAIWAKTHERNARRVLNLMIELEGLWVKMGQYLSTRADVLPEP 1561
C V + V+ ++ K I + H+R A ++ I GL+VK+GQ L + +LP
Sbjct: 104 CTNVVLRGVE-ENSPKYVEIMSACHQRAADALVAGAIRNGGLYVKLGQGLCSFNHLLPTE 162
Query: 1562 YIEVLKQLQDSLPPRPLEEV 1621
YI+ L+ L+D R EV
Sbjct: 163 YIQTLRVLEDKALTRGFREV 182
Score = 36.6 bits (83), Expect = 0.63
Identities = 23/70 (32%), Positives = 32/70 (45%)
Frame = +2
Query: 1835 SELFATFDLDPLATASVSSMPPK*TILSLV*IRNMLK*MNTS*QIAQVHRATLEDGREVV 2014
+ELF FD +P+A AS +AQVHRA L DG +V
Sbjct: 195 NELFQEFDYEPMAAAS----------------------------LAQVHRAKLHDGTDVA 226
Query: 2015 VKVQHDGIKE 2044
VKVQ+ +++
Sbjct: 227 VKVQYIDLRD 236
>Q7NZD1:UBIB_CHRVO Probable ubiquinone biosynthesis protein ubiB - Chromobacterium|
violaceum
Length = 508
Score = 45.8 bits (107), Expect = 0.001
Identities = 23/65 (35%), Positives = 36/65 (55%)
Frame = +3
Query: 2448 FLYQSTEKILILEYMDGIRLHDNDSLEEYGVDKKKLVEEITRAYAHQIYIDGFFNGDPHP 2627
F S+ ++L LE+M GI + + L E GVD +KL + Q++ GFF+ D HP
Sbjct: 230 FYDYSSREVLTLEWMHGIPVGQIERLREAGVDLQKLSRFGVEIFFTQVFRHGFFHADMHP 289
Query: 2628 GTLIL 2642
G + +
Sbjct: 290 GNIFV 294
Score = 42.0 bits (97), Expect(2) = 0.001
Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +2
Query: 1799 RGTIEKELGKPMSELFATFDLDPLATASVSSMPPK*TILSLV*IRNMLK*MNTS*QIAQV 1978
R +E+ LG+ + ELF FDL P+A+ASV AQV
Sbjct: 101 RQVVERSLGRKVEELFVDFDLKPVASASV----------------------------AQV 132
Query: 1979 HRATLED-----GREVVVKVQHDGIKEII 2050
H+A L GREV VKV GI +I
Sbjct: 133 HKAWLRQPDGGRGREVAVKVLRPGILPVI 161
Score = 23.1 bits (48), Expect(2) = 0.001
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +1
Query: 2128 QDLKNAKSLIEWIA--WAE-PQYDFNPMIDEWCKEAPKELDFNHEAENTRTVSKN 2283
QDL ++L W+ +A+ + ++ E+ K ELD HEA N + +N
Sbjct: 163 QDLSLMRTLAGWVEKLFADGKRLKPREVVAEFDKYLHDELDMMHEAANASQLRRN 217
Score = 40.8 bits (94), Expect = 0.034
Identities = 21/45 (46%), Positives = 28/45 (62%)
Frame = +2
Query: 1469 RRVLNLMIELEGLWVKMGQYLSTRADVLPEPYIEVLKQLQDSLPP 1603
+RV + L ++VK GQ LSTR D+LP Y + L LQD +PP
Sbjct: 50 QRVRLALESLGPIFVKFGQVLSTRRDLLPPEYADELALLQDRVPP 94
>Q9MA15:Y1960_ARATH Uncharacterized aarF domain-containing protein kinase At1g79600,|
chloroplast precursor - Arabidopsis thaliana (Mouse-ear
cress)
Length = 711
Score = 44.7 bits (104), Expect = 0.002
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +2
Query: 1448 KTHERNARRVLNLMIELEGLWVKMGQYLSTRADVLPEPYIEVLKQLQDSLPPRPLEE--V 1621
K ++ A + + L +VK+GQ LSTR D+ P Y+E L +LQD+LP P E
Sbjct: 141 KNMKKRAIELRRIFTRLGPTFVKLGQGLSTRPDLCPPDYLEELAELQDALPTFPDAEAFA 200
Query: 1622 CISSSL 1639
CI L
Sbjct: 201 CIEREL 206
Score = 43.9 bits (102), Expect = 0.004
Identities = 19/60 (31%), Positives = 36/60 (60%)
Frame = +3
Query: 2460 STEKILILEYMDGIRLHDNDSLEEYGVDKKKLVEEITRAYAHQIYIDGFFNGDPHPGTLI 2639
++ K+L +E+++G +L++ ++E G+ LV + Q+ GFF+ DPHPG L+
Sbjct: 327 TSRKVLTMEWVEGTKLNEQLAIESQGLKVLDLVNTGIQCSLRQLLEYGFFHADPHPGNLL 386
>Q87CN1:UBIB_XYLFT Probable ubiquinone biosynthesis protein ubiB - Xylella fastidiosa|
(strain Temecula1 / ATCC 700964)
Length = 552
Score = 44.7 bits (104), Expect = 0.002
Identities = 24/78 (30%), Positives = 38/78 (48%)
Frame = +3
Query: 2403 VFANHVNWDHHLTHSFLYQSTEKILILEYMDGIRLHDNDSLEEYGVDKKKLVEEITRAYA 2582
++ V W H + E++L LE M GI D L+ G+D+K L + R +
Sbjct: 222 IYVPEVIWSH---------TAERVLTLERMYGIPSDDIALLDASGIDRKALSSKGIRVFY 272
Query: 2583 HQIYIDGFFNGDPHPGTL 2636
Q++ D FF+ D H G +
Sbjct: 273 TQVFRDNFFHADAHSGNI 290
Score = 40.4 bits (93), Expect = 0.044
Identities = 31/84 (36%), Positives = 35/84 (41%)
Frame = +2
Query: 1799 RGTIEKELGKPMSELFATFDLDPLATASVSSMPPK*TILSLV*IRNMLK*MNTS*QIAQV 1978
R IE LGK + FA FD PLA+AS+S QV
Sbjct: 104 RSIIETALGKSVESAFAHFDTVPLASASIS----------------------------QV 135
Query: 1979 HRATLEDGREVVVKVQHDGIKEII 2050
H ATL D R VVVKV I+ I
Sbjct: 136 HAATLHDRRAVVVKVLRPDIEHQI 159
Score = 37.0 bits (84), Expect = 0.48
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = +2
Query: 1409 QWVSAVKKHA--IWAKTHERNARRVLNLMI-ELEGLWVKMGQYLSTRADVLPEPYIEVLK 1579
+W+ K I A+ E++ R L L + EL ++VK GQ LSTR D++P+ + L
Sbjct: 30 RWLRLAKPFVPRISAEIVEQSRGRRLRLALQELGPIFVKFGQILSTRRDLVPQDIGDELV 89
Query: 1580 QLQDSLPP 1603
LQD + P
Sbjct: 90 MLQDRVEP 97
>Q9PCE8:UBIB_XYLFA Probable ubiquinone biosynthesis protein ubiB - Xylella fastidiosa|
Length = 552
Score = 44.3 bits (103), Expect = 0.003
Identities = 32/81 (39%), Positives = 36/81 (44%)
Frame = +2
Query: 1808 IEKELGKPMSELFATFDLDPLATASVSSMPPK*TILSLV*IRNMLK*MNTS*QIAQVHRA 1987
IE LGK + FA FD PLA+AS+S QVH A
Sbjct: 107 IETALGKSVESAFAHFDTVPLASASIS----------------------------QVHAA 138
Query: 1988 TLEDGREVVVKVQHDGIKEII 2050
TL DGREVVVKV I+ I
Sbjct: 139 TLHDGREVVVKVLRPDIEHQI 159
Score = 44.3 bits (103), Expect = 0.003
Identities = 24/78 (30%), Positives = 38/78 (48%)
Frame = +3
Query: 2403 VFANHVNWDHHLTHSFLYQSTEKILILEYMDGIRLHDNDSLEEYGVDKKKLVEEITRAYA 2582
++ V W H + E++L LE M GI D L+ G+D+K L + R +
Sbjct: 222 IYVPEVIWSH---------TAEQVLTLERMYGIPSDDIALLDASGIDRKALSSKGIRVFY 272
Query: 2583 HQIYIDGFFNGDPHPGTL 2636
Q++ D FF+ D H G +
Sbjct: 273 TQVFRDNFFHADAHSGNI 290
Score = 37.0 bits (84), Expect = 0.48
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = +2
Query: 1409 QWVSAVKKHA--IWAKTHERNARRVLNLMI-ELEGLWVKMGQYLSTRADVLPEPYIEVLK 1579
+W+ K I A+ E++ R L L + EL ++VK GQ LSTR D++P+ + L
Sbjct: 30 RWLRLAKPFVPRISAEIVEQSRGRRLRLALQELGPIFVKFGQILSTRRDLVPQDIGDELV 89
Query: 1580 QLQDSLPP 1603
LQD + P
Sbjct: 90 MLQDRVEP 97
>Q87UZ0:UBIB_PSESM Probable ubiquinone biosynthesis protein ubiB - Pseudomonas syringae|
pv. tomato
Length = 539
Score = 43.5 bits (101), Expect = 0.005
Identities = 30/81 (37%), Positives = 39/81 (48%)
Frame = +2
Query: 1808 IEKELGKPMSELFATFDLDPLATASVSSMPPK*TILSLV*IRNMLK*MNTS*QIAQVHRA 1987
IE++LG + ++F+ FD PLA+ASV AQVH A
Sbjct: 111 IEEQLGARICDVFSRFDETPLASASV----------------------------AQVHAA 142
Query: 1988 TLEDGREVVVKVQHDGIKEII 2050
L+ G EVVVKV G+K II
Sbjct: 143 CLKTGEEVVVKVVRPGLKPII 163
Score = 42.4 bits (98), Expect = 0.012
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +3
Query: 2469 KILILEYMDGIRLHDNDSLEEYGVDKKKLVEEITRAYAHQIYIDGFFNGDPHPGTLIL 2642
K+L++E + G+++ D L + D K L E + QI+ D FF+ D HPG + +
Sbjct: 239 KVLVMERIYGLQVTDMAGLADQRTDMKMLAERGVEIFFTQIFRDSFFHADMHPGNIFV 296
Score = 39.7 bits (91), Expect = 0.075
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Frame = +2
Query: 1412 WVSAVKKHAIWAKTHERNAR-----RVLNLMIELEGLWVKMGQYLSTRADVLPEPYIEVL 1576
W+ AV+ W R + R + +L +++K GQ LSTR D+LPE + L
Sbjct: 33 WMLAVRFVLPWRWLPRRKSELSRGVRFRLALQDLGPIFIKFGQLLSTRRDLLPEDIADEL 92
Query: 1577 KQLQDSLPP 1603
LQD +PP
Sbjct: 93 MLLQDRVPP 101
>Q9HUB8:UBIB_PSEAE Probable ubiquinone biosynthesis protein ubiB - Pseudomonas|
aeruginosa
Length = 533
Score = 42.7 bits (99), Expect = 0.009
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +3
Query: 2469 KILILEYMDGIRLHDNDSLEEYGVDKKKLVEEITRAYAHQIYIDGFFNGDPHPGTLIL 2642
K+L++E + GI + D ++L + D K L E + Q++ D FF+ D HPG + +
Sbjct: 240 KVLVMERIYGIPVTDLETLRDQRTDFKALAERGVEIFFTQVFRDSFFHADMHPGNIFV 297
Score = 41.2 bits (95), Expect = 0.026
Identities = 24/52 (46%), Positives = 31/52 (59%)
Frame = +2
Query: 1460 RNARRVLNLMIELEGLWVKMGQYLSTRADVLPEPYIEVLKQLQDSLPPRPLE 1615
R AR L L +L +++K GQ LSTR D+LP+ L LQD +PP P E
Sbjct: 56 RGARLRLALQ-DLGPIFIKFGQILSTRRDLLPDDIANELAWLQDKVPPFPPE 106
Score = 41.2 bits (95), Expect = 0.026
Identities = 27/81 (33%), Positives = 39/81 (48%)
Frame = +2
Query: 1808 IEKELGKPMSELFATFDLDPLATASVSSMPPK*TILSLV*IRNMLK*MNTS*QIAQVHRA 1987
IE++LG + ++FA F+ +PLA+ASV AQVH A
Sbjct: 112 IEEQLGAKIEQVFARFEREPLASASV----------------------------AQVHAA 143
Query: 1988 TLEDGREVVVKVQHDGIKEII 2050
L+ G EVVVKV ++ +I
Sbjct: 144 RLKSGEEVVVKVIRPNLEPVI 164
>Q8PDW1:UBIB_XANCP Probable ubiquinone biosynthesis protein ubiB - Xanthomonas|
campestris pv. campestris
Length = 557
Score = 42.4 bits (98), Expect = 0.012
Identities = 23/78 (29%), Positives = 37/78 (47%)
Frame = +3
Query: 2403 VFANHVNWDHHLTHSFLYQSTEKILILEYMDGIRLHDNDSLEEYGVDKKKLVEEITRAYA 2582
++ V W H + E+ L LE + GI D L+ G+D+K L + R +
Sbjct: 227 LYVPEVIWSH---------TAERALTLERVYGIPSDDVAKLDAAGIDRKALAAKGVRVFY 277
Query: 2583 HQIYIDGFFNGDPHPGTL 2636
Q++ D FF+ D H G +
Sbjct: 278 TQVFRDNFFHADAHAGNI 295
Score = 37.0 bits (84), Expect = 0.48
Identities = 23/48 (47%), Positives = 28/48 (58%)
Frame = +2
Query: 1460 RNARRVLNLMIELEGLWVKMGQYLSTRADVLPEPYIEVLKQLQDSLPP 1603
R AR L L EL ++VK GQ LSTR D++P E L LQD + P
Sbjct: 51 RGARLRLALQ-ELGPIFVKFGQILSTRRDLIPPDVAEELTLLQDRVKP 97
Score = 36.2 bits (82), Expect = 0.83
Identities = 31/86 (36%), Positives = 36/86 (41%), Gaps = 5/86 (5%)
Frame = +2
Query: 1808 IEKELGKPMSELFATFDLDPLATASVSSMPPK*TILSLV*IRNMLK*MNTS*QIAQVHRA 1987
+E+ LG P+S FA FD PLA+AS IAQVH A
Sbjct: 107 VERALGLPVSVAFAAFDTTPLASAS----------------------------IAQVHAA 138
Query: 1988 TLEDG-----REVVVKVQHDGIKEII 2050
TL REVVVKV I+ I
Sbjct: 139 TLPPDANGLRREVVVKVLRPDIERQI 164
>Q9KVQ4:UBIB_VIBCH Probable ubiquinone biosynthesis protein ubiB - Vibrio cholerae|
Length = 544
Score = 39.3 bits (90), Expect = 0.098
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +3
Query: 2466 EKILILEYMDGIRLHDNDSLEEYGVDKKKLVEEITRAYAHQIYIDGFFNGDPHPGTLIL 2642
E +++ E + GI++ D L G + K L E + Q++ D FF+ D HPG + +
Sbjct: 237 ETVMVSERIYGIQVSDLAGLHANGTNMKLLAERGVSVFFTQVFRDSFFHADMHPGNVFV 295
Score = 38.9 bits (89), Expect = 0.13
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +2
Query: 1790 VQVRGTIEKELGKPMSELFATFDLDPLATASVSSMPPK*TILSLV*IRNMLK*MNTS*QI 1969
+Q + IE+ELG P+ F FD+ PLA+AS I
Sbjct: 103 LQAKQLIEEELGAPLETWFDDFDIKPLASAS----------------------------I 134
Query: 1970 AQVHRATLE-DGREVVVKVQHDGIK 2041
AQVH A L+ +GR+VV+KV I+
Sbjct: 135 AQVHTAKLKSNGRDVVLKVIRPDIR 159
Score = 37.0 bits (84), Expect = 0.48
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2
Query: 1493 ELEGLWVKMGQYLSTRADVLPEPYIEVLKQLQDSLPP 1603
EL +W+K GQ +STR D+ P + L LQD + P
Sbjct: 63 ELGPVWIKFGQMMSTRRDLFPPHIADPLAMLQDKVAP 99
>O04212:Y2090_ARATH Putative ABC1 protein At2g40090 precursor - Arabidopsis thaliana|
(Mouse-ear cress)
Length = 538
Score = 38.1 bits (87), Expect = 0.22
Identities = 26/79 (32%), Positives = 36/79 (45%)
Frame = +2
Query: 1793 QVRGTIEKELGKPMSELFATFDLDPLATASVSSMPPK*TILSLV*IRNMLK*MNTS*QIA 1972
QV +KE+G+ ++FA FD P+A+AS +A
Sbjct: 140 QVCEVFKKEVGEMPDQVFAEFDPVPIASAS----------------------------LA 171
Query: 1973 QVHRATLEDGREVVVKVQH 2029
QVH A DG++V VKVQH
Sbjct: 172 QVHVARTHDGKKVAVKVQH 190
Score = 36.6 bits (83), Expect = 0.63
Identities = 15/60 (25%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +2
Query: 1448 KTHERNARRVLNLMIELEGLWVKMGQYLSTRADVLPEPYIEVLKQ-LQDSLPPRPLEEVC 1624
+ H R+A+++ L + G+++K+GQ++ ++PE Y+ +++ + + P E+VC
Sbjct: 83 EVHLRSAQKLQELCFKNGGIYIKLGQHIGQLEYLVPEEYVRTMRESMLNKCPISSYEQVC 142
Score = 32.7 bits (73), Expect = 9.2
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 2179 PQYDFNPMIDEWCKEAPKELDFNHEAENTRTVSKNLSR 2292
P +D+ ++DE + PKELDF EA+N N +
Sbjct: 216 PSFDYRWLLDEMSESLPKELDFLVEAKNNEKCLDNFRK 253
>Q29RI0:ADCK3_BOVIN Chaperone-activity of bc1 complex-like, mitochondrial precursor - Bos|
taurus (Bovine)
Length = 648
Score = 32.7 bits (73), Expect = 9.1
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2
Query: 1967 IAQVHRATLEDGREVVVKVQHDGIKEII 2050
I QVH A L+ GREV +K+Q+ G+ + I
Sbjct: 341 IGQVHLARLKGGREVAMKIQYPGVAQSI 368
Database: uniprot_sprot.fasta.out
Posted date: Jul 19, 2007 5:58 PM
Number of letters in database: 100,686,439
Number of sequences in database: 274,295
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 509,289,407
Number of extensions: 11136557
Number of successful extensions: 31430
Number of sequences better than 10.0: 64
Number of HSP's gapped: 31387
Number of HSP's successfully gapped: 150
Length of query: 998
Length of database: 100,686,439
Length adjustment: 123
Effective length of query: 875
Effective length of database: 66,948,154
Effective search space: 58579634750
Effective search space used: 58579634750
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)