No.
Definition
Score (bits)
E Value
1 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...
258
1e-64
2 dbj|AP003726.3| Oryza sativa (japonica cultivar-group) genomic D...
258
1e-64
3 ref|NM_001065018.1| Oryza sativa (japonica cultivar-group) Os06g...
238
1e-58
4 dbj|AK122000.1| Oryza sativa (japonica cultivar-group) cDNA clon...
238
1e-58
5 dbj|AK120169.1| Oryza sativa (japonica cultivar-group) cDNA clon...
238
1e-58
6 dbj|AK065611.1| Oryza sativa (japonica cultivar-group) cDNA clon...
238
1e-58
7 gb|AY048258.1| Arabidopsis thaliana AT5g24810/F6A4_20 mRNA, comp...
48
0.19
8 emb|AL392145.1|ATT4C12 Arabidopsis thaliana DNA chromosome 5, BA...
48
0.19
9 gb|AF069716.1|AF069716 Arabidopsis Thaliana BAC F6A4, Chromosome...
48
0.19
10 ref|NM_001060021.1| Oryza sativa (japonica cultivar-group) Os04g...
46
0.74
11 ref|NM_122390.3| Arabidopsis thaliana unknown protein (AT5G24810...
46
0.74
12 gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome
46
0.74
13 gb|BT010176.1| Arabidopsis thaliana At5g24810/F6A4.20 mRNA, comp...
46
0.74
14 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...
46
0.74
15 gb|AY059911.1| Arabidopsis thaliana Unknown protein (AT5g24810;F...
46
0.74
16 emb|AL663000.4|OSJN00201 Oryza sativa genomic DNA, chromosome 4,...
46
0.74
17 dbj|AK107119.1| Oryza sativa (japonica cultivar-group) cDNA clon...
46
0.74
18 gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete ge...
46
0.74
19 gb|AC124968.36| Medicago truncatula clone mth2-15e21, complete s...
46
0.74
20 gb|CP000454.1| Arthrobacter sp. FB24, complete genome
44
2.9
21 ref|NM_001056420.1| Oryza sativa (japonica cultivar-group) Os03g...
44
2.9
22 gb|AC191240.1| Callithrix jacchus BAC clone CH259-77H12 from chr...
44
2.9
23 emb|CT990560.2| M.spretus DNA sequence from clone XX-CH35_359A6 ...
44
2.9
24 ref|NM_001029959.2| Danio rerio reticulon 2b (rtn2b), mRNA >gi|9...
44
2.9
25 ref|XM_503202.1| Yarrowia lipolytica CLIB122, YALI0D23727g predi...
44
2.9
26 gb|AC131743.3| Mus musculus BAC clone RP23-68K21 from chromosome...
44
2.9
27 gb|AC133204.3| Mus musculus BAC clone RP23-106N3 from chromosome...
44
2.9
28 gb|AC109131.8| Homo sapiens 3 BAC RP11-296J4 (Roswell Park Cance...
44
2.9
29 gb|AC135908.1| Genomic sequence for Oryza sativa, Nipponbare str...
44
2.9
30 dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochond...
44
2.9
31 gb|AY555064.1| Danio rerio reticulon 8-c (rtn8) mRNA, complete cds
44
2.9
32 gb|DQ167400.1| Oryza sativa (japonica cultivar-group) cultivar N...
44
2.9
33 gb|DQ167807.1| Oryza sativa (japonica cultivar-group) isolate PA...
44
2.9
34 gb|DQ167399.1| Oryza sativa (indica cultivar-group) isolate 93-1...
44
2.9
35 gb|AC116903.3| Homo sapiens chromosome 15, clone RP11-152L20, co...
44
2.9
36 gb|AC025018.6| Homo sapiens chromosome 18, clone RP11-320C19, co...
44
2.9
37 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...
44
2.9
38 gb|AC098475.2| Homo sapiens chromosome 3 clone RP11-611H7, compl...
44
2.9
39 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...
44
2.9
40 gb|AC158299.7| Mus musculus chromosome 7, clone RP24-271L24, com...
44
2.9
41 emb|AJ276505.2|MMU276505 Mus musculus genomic fragment, 281000 b...
44
2.9
42 gb|AC135996.4| Homo sapiens chromosome 15, clone RP13-656G3, com...
44
2.9
43 dbj|AK073807.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
2.9
44 emb|BX255948.4| Zebrafish DNA sequence from clone CH211-250J1, c...
44
2.9
45 emb|BX248087.9| Zebrafish DNA sequence from clone CH211-191J22, ...
44
2.9
46 gb|AC151669.5| Mus musculus chromosome 5, clone RP23-44L13, comp...
44
2.9
47 emb|AL954379.17| Mouse DNA sequence from clone RP24-162K15 on ch...
44
2.9
48 gb|AC005319.1|AC005319 Human Chromosome 15q26.1 PAC clone pDJ430...
44
2.9
49 gb|AC173486.2| Mus musculus BAC clone RP23-18O16 from chromosome...
44
2.9
50 emb|AL928775.2|CNS08CC5 Oryza sativa chromosome 12, . BAC OSJNBa...
44
2.9
51 emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1...
44
2.9
52 emb|AL837521.6| Mouse DNA sequence from clone RP23-28I8 on chrom...
44
2.9
53 gb|AC168066.4| Mus musculus BAC clone RP23-134F19 from chromosom...
44
2.9
>dbj|AP008212.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
Length = 30731886
Score = 258 bits (130), Expect = 1e-64
Identities = 232/266 (87%)
Strand = Plus / Minus
Query: 1355 tagaagcagattaacatctctctcatgtgcaagcaggctgttcagaagagagtgcagtgg 1414
||||||||||||||||||| | | || ||||||||| |||||||||||||| | |||
Sbjct: 29006966 tagaagcagattaacatcttcttgaggtacaagcaggcagttcagaagagagttaaatgg 29006907
Query: 1415 gttagcgctgttaagaagcacgctatatgggcaaagacgcacgagcgcaatgctcgtcgt 1474
||| |||||| ||| ||| | ||||||||| |||| || |||||||| ||||||||||||
Sbjct: 29006906 gttggcgctggtaaaaaggatgctatatggacaaaaacacacgagcgaaatgctcgtcgt 29006847
Query: 1475 gttctcaacctgatgatagagctagaaggtttgtgggtgaagatgggccagtatttgtcc 1534
||||||||||||||||||||| |||||||||| |||||||| ||||| || ||||| |||
Sbjct: 29006846 gttctcaacctgatgatagagttagaaggtttatgggtgaaaatgggacaatatttatcc 29006787
Query: 1535 accagagcggacgtgcttcctgagccgtacatagaggtcctgaagcagttgcaggactcg 1594
|| ||||| || ||||||||||| || |||||| | ||||| ||||||||||||||||||
Sbjct: 29006786 acaagagcagatgtgcttcctgaaccctacataaatgtcctcaagcagttgcaggactcg 29006727
Query: 1595 cttcctccacgccctcttgaagaggt 1620
|||||||| |||||||||||||||||
Sbjct: 29006726 cttcctcctcgccctcttgaagaggt 29006701
Score = 208 bits (105), Expect = 9e-50
Identities = 129/137 (94%)
Strand = Plus / Minus
Query: 2746 ttttctgtaggcaattttcttgtaagcaaggaacctccacacaaaccgattctccttgat 2805
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 29005464 ttttctgtaggcaattttcttgttagcaaggaacctccacacaagccgattctccttgat 29005405
Query: 2806 tttgggctcactaaacgcatatcacagtcgatgaagcaagcactagcaaagatgtttttg 2865
|||||||| |||||||||||||| || || |||| ||| |||||||||||||||||||||
Sbjct: 29005404 tttgggcttactaaacgcatatctcaatcaatgaggcaggcactagcaaagatgtttttg 29005345
Query: 2866 tcatgcgctgaggtttg 2882
|||||||||||||||||
Sbjct: 29005344 tcatgcgctgaggtttg 29005328
Score = 167 bits (84), Expect = 3e-37
Identities = 120/132 (90%)
Strand = Plus / Minus
Query: 2126 gtcaggatttgaagaatgcaaaatcattgatcgaatggattgcatgggcagaacctcaat 2185
|||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||
Sbjct: 29006213 gtcaggatttgaagaatgcaaaatcattagttgaatggattgcatgggcagagcctcaat 29006154
Query: 2186 atgacttcaacccaatgattgatgaatggtgcaaggaggcacccaaggaacttgatttca 2245
|| | || ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 29006153 ataattttaacccgatgatagatgaatggtgcaaggaggcaccaaaggaacttgatttca 29006094
Query: 2246 atcatgaagcag 2257
| ||||| ||||
Sbjct: 29006093 accatgaggcag 29006082
Score = 143 bits (72), Expect = 4e-30
Identities = 153/180 (85%)
Strand = Plus / Minus
Query: 2452 tgtatcagtctactgaaaagattctaattctggaatacatggacggaattcgcttacatg 2511
|||| ||||| ||||| ||| |||||||| || |||| ||||| |||||||| || |||
Sbjct: 29005743 tgtaccagtcaactgataaggttctaattttgcaatatatggatggaattcgtttgaatg 29005684
Query: 2512 acaatgattcattggaagaatatggtgtcgataagaaaaaactcgttgaagagataaccc 2571
|||||||||| || |||| ||||||||| |||||| ||| ||| || || ||||||||||
Sbjct: 29005683 acaatgattcgttagaagcatatggtgttgataagcaaagacttgtggaggagataaccc 29005624
Query: 2572 gtgcttatgctcatcaaatatacattgacggtttcttcaacggagatcctcatcctggta 2631
|||| |||||||||||||||||| |||| || ||||| ||||| |||||||| |||||||
Sbjct: 29005623 gtgcatatgctcatcaaatatacgttgatggcttctttaacggcgatcctcaccctggta 29005564
Score = 135 bits (68), Expect = 1e-27
Identities = 89/96 (92%)
Strand = Plus / Minus
Query: 1964 cagatagcacaggttcatcgtgcaactctggaagatggcagagaagttgttgtgaaagtt 2023
||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||| |
Sbjct: 29006376 cagatagcacaggttcatcgtgcaactcttgtagatggcagagaagtagttgtgaaaatc 29006317
Query: 2024 cagcatgatggtatcaaagagatcatattagaggtt 2059
|| ||||||||||||||||| |||||||||||||||
Sbjct: 29006316 caacatgatggtatcaaagatatcatattagaggtt 29006281
Score = 103 bits (52), Expect = 4e-18
Identities = 97/112 (86%)
Strand = Plus / Minus
Query: 1779 ttgtctgtcgtgtacaggttcgtggaaccatagaaaaagaacttggtaaacccatgagtg 1838
|||||| || ||| |||||||||||||||||||| ||||||||||| |||||||||| ||
Sbjct: 29006619 ttgtctctcatgttcaggttcgtggaaccatagagaaagaacttgggaaacccatgaatg 29006560
Query: 1839 aactctttgctacttttgaccttgaccctcttgcaaccgcatcagtaagttc 1890
| || ||||||| ||||| || || ||||| ||||| ||||||||||||||
Sbjct: 29006559 atctgtttgctaattttgtgctggatcctctagcaactgcatcagtaagttc 29006508
Score = 52.0 bits (26), Expect = 0.012
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 1226 atgggatggggaaccctcatatccaggcgcctcaaagttttttcattggcgttgttcgtc 1285
||||||||||||| | | || |||||||||||||||| ||||| |||| ||||| |
Sbjct: 29007103 atgggatggggaaacaccttaaccaggcgcctcaaagtcttttccatggccttgtttata 29007044
Query: 1286 tacttggactataaggtg 1303
||||| ||||||||||||
Sbjct: 29007043 tacttcgactataaggtg 29007026
>dbj|AP003726.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0596H10
Length = 166570
Score = 258 bits (130), Expect = 1e-64
Identities = 232/266 (87%)
Strand = Plus / Minus
Query: 1355 tagaagcagattaacatctctctcatgtgcaagcaggctgttcagaagagagtgcagtgg 1414
||||||||||||||||||| | | || ||||||||| |||||||||||||| | |||
Sbjct: 21953 tagaagcagattaacatcttcttgaggtacaagcaggcagttcagaagagagttaaatgg 21894
Query: 1415 gttagcgctgttaagaagcacgctatatgggcaaagacgcacgagcgcaatgctcgtcgt 1474
||| |||||| ||| ||| | ||||||||| |||| || |||||||| ||||||||||||
Sbjct: 21893 gttggcgctggtaaaaaggatgctatatggacaaaaacacacgagcgaaatgctcgtcgt 21834
Query: 1475 gttctcaacctgatgatagagctagaaggtttgtgggtgaagatgggccagtatttgtcc 1534
||||||||||||||||||||| |||||||||| |||||||| ||||| || ||||| |||
Sbjct: 21833 gttctcaacctgatgatagagttagaaggtttatgggtgaaaatgggacaatatttatcc 21774
Query: 1535 accagagcggacgtgcttcctgagccgtacatagaggtcctgaagcagttgcaggactcg 1594
|| ||||| || ||||||||||| || |||||| | ||||| ||||||||||||||||||
Sbjct: 21773 acaagagcagatgtgcttcctgaaccctacataaatgtcctcaagcagttgcaggactcg 21714
Query: 1595 cttcctccacgccctcttgaagaggt 1620
|||||||| |||||||||||||||||
Sbjct: 21713 cttcctcctcgccctcttgaagaggt 21688
Score = 208 bits (105), Expect = 9e-50
Identities = 129/137 (94%)
Strand = Plus / Minus
Query: 2746 ttttctgtaggcaattttcttgtaagcaaggaacctccacacaaaccgattctccttgat 2805
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 20451 ttttctgtaggcaattttcttgttagcaaggaacctccacacaagccgattctccttgat 20392
Query: 2806 tttgggctcactaaacgcatatcacagtcgatgaagcaagcactagcaaagatgtttttg 2865
|||||||| |||||||||||||| || || |||| ||| |||||||||||||||||||||
Sbjct: 20391 tttgggcttactaaacgcatatctcaatcaatgaggcaggcactagcaaagatgtttttg 20332
Query: 2866 tcatgcgctgaggtttg 2882
|||||||||||||||||
Sbjct: 20331 tcatgcgctgaggtttg 20315
Score = 167 bits (84), Expect = 3e-37
Identities = 120/132 (90%)
Strand = Plus / Minus
Query: 2126 gtcaggatttgaagaatgcaaaatcattgatcgaatggattgcatgggcagaacctcaat 2185
|||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||
Sbjct: 21200 gtcaggatttgaagaatgcaaaatcattagttgaatggattgcatgggcagagcctcaat 21141
Query: 2186 atgacttcaacccaatgattgatgaatggtgcaaggaggcacccaaggaacttgatttca 2245
|| | || ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 21140 ataattttaacccgatgatagatgaatggtgcaaggaggcaccaaaggaacttgatttca 21081
Query: 2246 atcatgaagcag 2257
| ||||| ||||
Sbjct: 21080 accatgaggcag 21069
Score = 143 bits (72), Expect = 4e-30
Identities = 153/180 (85%)
Strand = Plus / Minus
Query: 2452 tgtatcagtctactgaaaagattctaattctggaatacatggacggaattcgcttacatg 2511
|||| ||||| ||||| ||| |||||||| || |||| ||||| |||||||| || |||
Sbjct: 20730 tgtaccagtcaactgataaggttctaattttgcaatatatggatggaattcgtttgaatg 20671
Query: 2512 acaatgattcattggaagaatatggtgtcgataagaaaaaactcgttgaagagataaccc 2571
|||||||||| || |||| ||||||||| |||||| ||| ||| || || ||||||||||
Sbjct: 20670 acaatgattcgttagaagcatatggtgttgataagcaaagacttgtggaggagataaccc 20611
Query: 2572 gtgcttatgctcatcaaatatacattgacggtttcttcaacggagatcctcatcctggta 2631
|||| |||||||||||||||||| |||| || ||||| ||||| |||||||| |||||||
Sbjct: 20610 gtgcatatgctcatcaaatatacgttgatggcttctttaacggcgatcctcaccctggta 20551
Score = 135 bits (68), Expect = 1e-27
Identities = 89/96 (92%)
Strand = Plus / Minus
Query: 1964 cagatagcacaggttcatcgtgcaactctggaagatggcagagaagttgttgtgaaagtt 2023
||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||| |
Sbjct: 21363 cagatagcacaggttcatcgtgcaactcttgtagatggcagagaagtagttgtgaaaatc 21304
Query: 2024 cagcatgatggtatcaaagagatcatattagaggtt 2059
|| ||||||||||||||||| |||||||||||||||
Sbjct: 21303 caacatgatggtatcaaagatatcatattagaggtt 21268
Score = 103 bits (52), Expect = 4e-18
Identities = 97/112 (86%)
Strand = Plus / Minus
Query: 1779 ttgtctgtcgtgtacaggttcgtggaaccatagaaaaagaacttggtaaacccatgagtg 1838
|||||| || ||| |||||||||||||||||||| ||||||||||| |||||||||| ||
Sbjct: 21606 ttgtctctcatgttcaggttcgtggaaccatagagaaagaacttgggaaacccatgaatg 21547
Query: 1839 aactctttgctacttttgaccttgaccctcttgcaaccgcatcagtaagttc 1890
| || ||||||| ||||| || || ||||| ||||| ||||||||||||||
Sbjct: 21546 atctgtttgctaattttgtgctggatcctctagcaactgcatcagtaagttc 21495
Score = 52.0 bits (26), Expect = 0.012
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 1226 atgggatggggaaccctcatatccaggcgcctcaaagttttttcattggcgttgttcgtc 1285
||||||||||||| | | || |||||||||||||||| ||||| |||| ||||| |
Sbjct: 22090 atgggatggggaaacaccttaaccaggcgcctcaaagtcttttccatggccttgtttata 22031
Query: 1286 tacttggactataaggtg 1303
||||| ||||||||||||
Sbjct: 22030 tacttcgactataaggtg 22013
>ref|NM_001065018.1 | Oryza sativa (japonica cultivar-group) Os06g0701300 (Os06g0701300)
mRNA, complete cds
Length = 2958
Score = 238 bits (120), Expect = 1e-58
Identities = 204/232 (87%)
Strand = Plus / Plus
Query: 1389 aggctgttcagaagagagtgcagtgggttagcgctgttaagaagcacgctatatgggcaa 1448
|||| |||||||||||||| | |||||| |||||| ||| ||| | ||||||||| |||
Sbjct: 350 aggcagttcagaagagagttaaatgggttggcgctggtaaaaaggatgctatatggacaa 409
Query: 1449 agacgcacgagcgcaatgctcgtcgtgttctcaacctgatgatagagctagaaggtttgt 1508
| || |||||||| ||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 410 aaacacacgagcgaaatgctcgtcgtgttctcaacctgatgatagagttagaaggtttat 469
Query: 1509 gggtgaagatgggccagtatttgtccaccagagcggacgtgcttcctgagccgtacatag 1568
||||||| ||||| || ||||| ||||| ||||| || ||||||||||| || ||||||
Sbjct: 470 gggtgaaaatgggacaatatttatccacaagagcagatgtgcttcctgaaccctacataa 529
Query: 1569 aggtcctgaagcagttgcaggactcgcttcctccacgccctcttgaagaggt 1620
| ||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 530 atgtcctcaagcagttgcaggactcgcttcctcctcgccctcttgaagaggt 581
Score = 186 bits (94), Expect = 3e-43
Identities = 196/230 (85%)
Strand = Plus / Plus
Query: 2129 aggatttgaagaatgcaaaatcattgatcgaatggattgcatgggcagaacctcaatatg 2188
||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||
Sbjct: 755 aggatttgaagaatgcaaaatcattagttgaatggattgcatgggcagagcctcaatata 814
Query: 2189 acttcaacccaatgattgatgaatggtgcaaggaggcacccaaggaacttgatttcaatc 2248
| || ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 815 attttaacccgatgatagatgaatggtgcaaggaggcaccaaaggaacttgatttcaacc 874
Query: 2249 atgaagcagagaacactaggaccgtctccaagaatcttagtcggaaaactgaaggtggga 2308
|||| ||||||||||| | | | ||||||| ||||||||||| ||||| | | | ||
Sbjct: 875 atgaggcagagaacacaaaggctgtctccagtaatcttagtcgaaaaaccaattgcgaga 934
Query: 2309 gtggcagtgtttccagtgatgttgatgtactgataccagaaattattcag 2358
|||| ||| || |||| |||||| |||||||| |||||| ||||||||
Sbjct: 935 gtggtgctgtctctagtgctgttgacgtactgattccagaagttattcag 984
Score = 182 bits (92), Expect = 5e-42
Identities = 116/124 (93%)
Strand = Plus / Plus
Query: 2755 ggcaattttcttgtaagcaaggaacctccacacaaaccgattctccttgattttgggctc 2814
|||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1153 ggcaattttcttgttagcaaggaacctccacacaagccgattctccttgattttgggctt 1212
Query: 2815 actaaacgcatatcacagtcgatgaagcaagcactagcaaagatgtttttgtcatgcgct 2874
|||||||||||||| || || |||| ||| ||||||||||||||||||||||||||||||
Sbjct: 1213 actaaacgcatatctcaatcaatgaggcaggcactagcaaagatgtttttgtcatgcgct 1272
Query: 2875 gagg 2878
||||
Sbjct: 1273 gagg 1276
Score = 139 bits (70), Expect = 7e-29
Identities = 148/174 (85%)
Strand = Plus / Plus
Query: 2456 tcagtctactgaaaagattctaattctggaatacatggacggaattcgcttacatgacaa 2515
|||||| ||||| ||| |||||||| || |||| ||||| |||||||| || |||||||
Sbjct: 981 tcagtcaactgataaggttctaattttgcaatatatggatggaattcgtttgaatgacaa 1040
Query: 2516 tgattcattggaagaatatggtgtcgataagaaaaaactcgttgaagagataacccgtgc 2575
|||||| || |||| ||||||||| |||||| ||| ||| || || ||||||||||||||
Sbjct: 1041 tgattcgttagaagcatatggtgttgataagcaaagacttgtggaggagataacccgtgc 1100
Query: 2576 ttatgctcatcaaatatacattgacggtttcttcaacggagatcctcatcctgg 2629
|||||||||||||||||| |||| || ||||| ||||| |||||||| |||||
Sbjct: 1101 atatgctcatcaaatatacgttgatggcttctttaacggcgatcctcaccctgg 1154
Score = 125 bits (63), Expect = 1e-24
Identities = 84/91 (92%)
Strand = Plus / Plus
Query: 1967 atagcacaggttcatcgtgcaactctggaagatggcagagaagttgttgtgaaagttcag 2026
|||||||||||||||||||||||||| | ||||||||||||||| ||||||||| | ||
Sbjct: 667 atagcacaggttcatcgtgcaactcttgtagatggcagagaagtagttgtgaaaatccaa 726
Query: 2027 catgatggtatcaaagagatcatattagagg 2057
||||||||||||||||| |||||||||||||
Sbjct: 727 catgatggtatcaaagatatcatattagagg 757
Score = 81.8 bits (41), Expect = 1e-11
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 1794 aggttcgtggaaccatagaaaaagaacttggtaaacccatgagtgaactctttgctactt 1853
||||||||||||||||||| ||||||||||| |||||||||| ||| || ||||||| ||
Sbjct: 578 aggttcgtggaaccatagagaaagaacttgggaaacccatgaatgatctgtttgctaatt 637
Query: 1854 ttgaccttgaccctcttgcaaccgcatca 1882
||| || || ||||| ||||| ||||||
Sbjct: 638 ttgtgctggatcctctagcaactgcatca 666
Score = 48.1 bits (24), Expect = 0.19
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 1226 atgggatggggaaccctcatatccaggcgcctcaaagttttttcattggcgttgttcgtc 1285
||||||||||||| | | || |||||||||||||||| ||||| |||| ||||| |
Sbjct: 277 atgggatggggaaacaccttaaccaggcgcctcaaagtcttttccatggccttgtttata 336
Query: 1286 tacttggactataagg 1301
||||| ||||||||||
Sbjct: 337 tacttcgactataagg 352
>dbj|AK122000.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J033110I09, full
insert sequence
Length = 882
Score = 238 bits (120), Expect = 1e-58
Identities = 204/232 (87%)
Strand = Plus / Plus
Query: 1389 aggctgttcagaagagagtgcagtgggttagcgctgttaagaagcacgctatatgggcaa 1448
|||| |||||||||||||| | |||||| |||||| ||| ||| | ||||||||| |||
Sbjct: 351 aggcagttcagaagagagttaaatgggttggcgctggtaaaaaggatgctatatggacaa 410
Query: 1449 agacgcacgagcgcaatgctcgtcgtgttctcaacctgatgatagagctagaaggtttgt 1508
| || |||||||| ||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 411 aaacacacgagcgaaatgctcgtcgtgttctcaacctgatgatagagttagaaggtttat 470
Query: 1509 gggtgaagatgggccagtatttgtccaccagagcggacgtgcttcctgagccgtacatag 1568
||||||| ||||| || ||||| ||||| ||||| || ||||||||||| || ||||||
Sbjct: 471 gggtgaaaatgggacaatatttatccacaagagcagatgtgcttcctgaaccctacataa 530
Query: 1569 aggtcctgaagcagttgcaggactcgcttcctccacgccctcttgaagaggt 1620
| ||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 531 atgtcctcaagcagttgcaggactcgcttcctcctcgccctcttgaagaggt 582
Score = 151 bits (76), Expect = 2e-32
Identities = 112/124 (90%)
Strand = Plus / Plus
Query: 2129 aggatttgaagaatgcaaaatcattgatcgaatggattgcatgggcagaacctcaatatg 2188
||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||
Sbjct: 756 aggatttgaagaatgcaaaatcattagttgaatggattgcatgggcagagcctcaatata 815
Query: 2189 acttcaacccaatgattgatgaatggtgcaaggaggcacccaaggaacttgatttcaatc 2248
| || ||||| ||||| ||||||||||||||||||||||| ||| ||||||||||||| |
Sbjct: 816 attttaacccgatgatagatgaatggtgcaaggaggcaccaaagaaacttgatttcaacc 875
Query: 2249 atga 2252
||||
Sbjct: 876 atga 879
Score = 125 bits (63), Expect = 1e-24
Identities = 84/91 (92%)
Strand = Plus / Plus
Query: 1967 atagcacaggttcatcgtgcaactctggaagatggcagagaagttgttgtgaaagttcag 2026
|||||||||||||||||||||||||| | ||||||||||||||| ||||||||| | ||
Sbjct: 668 atagcacaggttcatcgtgcaactcttgtagatggcagagaagtagttgtgaaaatccaa 727
Query: 2027 catgatggtatcaaagagatcatattagagg 2057
||||||||||||||||| |||||||||||||
Sbjct: 728 catgatggtatcaaagatatcatattagagg 758
Score = 81.8 bits (41), Expect = 1e-11
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 1794 aggttcgtggaaccatagaaaaagaacttggtaaacccatgagtgaactctttgctactt 1853
||||||||||||||||||| ||||||||||| |||||||||| ||| || ||||||| ||
Sbjct: 579 aggttcgtggaaccatagagaaagaacttgggaaacccatgaatgatctgtttgctaatt 638
Query: 1854 ttgaccttgaccctcttgcaaccgcatca 1882
||| || || ||||| ||||| ||||||
Sbjct: 639 ttgtgctggatcctctagcaactgcatca 667
Score = 48.1 bits (24), Expect = 0.19
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 1226 atgggatggggaaccctcatatccaggcgcctcaaagttttttcattggcgttgttcgtc 1285
||||||||||||| | | || |||||||||||||||| ||||| |||| ||||| |
Sbjct: 278 atgggatggggaaacaccttaaccaggcgcctcaaagtcttttccatggccttgtttata 337
Query: 1286 tacttggactataagg 1301
||||| ||||||||||
Sbjct: 338 tacttcgactataagg 353
>dbj|AK120169.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013031N20, full
insert sequence
Length = 1974
Score = 238 bits (120), Expect = 1e-58
Identities = 204/232 (87%)
Strand = Plus / Plus
Query: 1389 aggctgttcagaagagagtgcagtgggttagcgctgttaagaagcacgctatatgggcaa 1448
|||| |||||||||||||| | |||||| |||||| ||| ||| | ||||||||| |||
Sbjct: 350 aggcagttcagaagagagttaaatgggttggcgctggtaaaaaggatgctatatggacaa 409
Query: 1449 agacgcacgagcgcaatgctcgtcgtgttctcaacctgatgatagagctagaaggtttgt 1508
| || |||||||| ||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 410 aaacacacgagcgaaatgctcgtcgtgttctcaacctgatgatagagttagaaggtttat 469
Query: 1509 gggtgaagatgggccagtatttgtccaccagagcggacgtgcttcctgagccgtacatag 1568
||||||| ||||| || ||||| ||||| ||||| || ||||||||||| || ||||||
Sbjct: 470 gggtgaaaatgggacaatatttatccacaagagcagatgtgcttcctgaaccctacataa 529
Query: 1569 aggtcctgaagcagttgcaggactcgcttcctccacgccctcttgaagaggt 1620
| ||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 530 atgtcctcaagcagttgcaggactcgcttcctcctcgccctcttgaagaggt 581
Score = 186 bits (94), Expect = 3e-43
Identities = 196/230 (85%)
Strand = Plus / Plus
Query: 2129 aggatttgaagaatgcaaaatcattgatcgaatggattgcatgggcagaacctcaatatg 2188
||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||
Sbjct: 755 aggatttgaagaatgcaaaatcattagttgaatggattgcatgggcagagcctcaatata 814
Query: 2189 acttcaacccaatgattgatgaatggtgcaaggaggcacccaaggaacttgatttcaatc 2248
| || ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 815 attttaacccgatgatagatgaatggtgcaaggaggcaccaaaggaacttgatttcaacc 874
Query: 2249 atgaagcagagaacactaggaccgtctccaagaatcttagtcggaaaactgaaggtggga 2308
|||| ||||||||||| | | | ||||||| ||||||||||| ||||| | | | ||
Sbjct: 875 atgaggcagagaacacaaaggctgtctccagtaatcttagtcgaaaaaccaattgcgaga 934
Query: 2309 gtggcagtgtttccagtgatgttgatgtactgataccagaaattattcag 2358
|||| ||| || |||| |||||| |||||||| |||||| ||||||||
Sbjct: 935 gtggtgctgtctctagtgctgttgacgtactgattccagaagttattcag 984
Score = 182 bits (92), Expect = 5e-42
Identities = 116/124 (93%)
Strand = Plus / Plus
Query: 2755 ggcaattttcttgtaagcaaggaacctccacacaaaccgattctccttgattttgggctc 2814
|||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1153 ggcaattttcttgttagcaaggaacctccacacaagccgattctccttgattttgggctt 1212
Query: 2815 actaaacgcatatcacagtcgatgaagcaagcactagcaaagatgtttttgtcatgcgct 2874
|||||||||||||| || || |||| ||| ||||||||||||||||||||||||||||||
Sbjct: 1213 actaaacgcatatctcaatcaatgaggcaggcactagcaaagatgtttttgtcatgcgct 1272
Query: 2875 gagg 2878
||||
Sbjct: 1273 gagg 1276
Score = 131 bits (66), Expect = 2e-26
Identities = 147/174 (84%)
Strand = Plus / Plus
Query: 2456 tcagtctactgaaaagattctaattctggaatacatggacggaattcgcttacatgacaa 2515
|||||| ||||| ||| |||||||| || |||| ||||| |||||||| || |||||||
Sbjct: 981 tcagtcaactgataaggttctaattttgcaatatatggatggaattcgtttgaatgacaa 1040
Query: 2516 tgattcattggaagaatatggtgtcgataagaaaaaactcgttgaagagataacccgtgc 2575
|||||| || |||| ||||||||| |||||| ||| ||| || || ||||||||||||||
Sbjct: 1041 tgattcgttagaagcatatggtgttgataagcaaagacttgtggaggagataacccgtgc 1100
Query: 2576 ttatgctcatcaaatatacattgacggtttcttcaacggagatcctcatcctgg 2629
|||||||||||||||||| |||| || ||||| |||| |||||||| |||||
Sbjct: 1101 atatgctcatcaaatatacgttgatggcttctttaacgacgatcctcaccctgg 1154
Score = 125 bits (63), Expect = 1e-24
Identities = 84/91 (92%)
Strand = Plus / Plus
Query: 1967 atagcacaggttcatcgtgcaactctggaagatggcagagaagttgttgtgaaagttcag 2026
|||||||||||||||||||||||||| | ||||||||||||||| ||||||||| | ||
Sbjct: 667 atagcacaggttcatcgtgcaactcttgtagatggcagagaagtagttgtgaaaatccaa 726
Query: 2027 catgatggtatcaaagagatcatattagagg 2057
||||||||||||||||| |||||||||||||
Sbjct: 727 catgatggtatcaaagatatcatattagagg 757
Score = 81.8 bits (41), Expect = 1e-11
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 1794 aggttcgtggaaccatagaaaaagaacttggtaaacccatgagtgaactctttgctactt 1853
||||||||||||||||||| ||||||||||| |||||||||| ||| || ||||||| ||
Sbjct: 578 aggttcgtggaaccatagagaaagaacttgggaaacccatgaatgatctgtttgctaatt 637
Query: 1854 ttgaccttgaccctcttgcaaccgcatca 1882
||| || || ||||| ||||| ||||||
Sbjct: 638 ttgtgctggatcctctagcaactgcatca 666
Score = 48.1 bits (24), Expect = 0.19
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 1226 atgggatggggaaccctcatatccaggcgcctcaaagttttttcattggcgttgttcgtc 1285
||||||||||||| | | || |||||||||||||||| ||||| |||| ||||| |
Sbjct: 277 atgggatggggaaacaccttaaccaggcgcctcaaagtcttttccatggccttgtttata 336
Query: 1286 tacttggactataagg 1301
||||| ||||||||||
Sbjct: 337 tacttcgactataagg 352
>dbj|AK065611.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013029I23, full
insert sequence
Length = 2957
Score = 238 bits (120), Expect = 1e-58
Identities = 204/232 (87%)
Strand = Plus / Plus
Query: 1389 aggctgttcagaagagagtgcagtgggttagcgctgttaagaagcacgctatatgggcaa 1448
|||| |||||||||||||| | |||||| |||||| ||| ||| | ||||||||| |||
Sbjct: 350 aggcagttcagaagagagttaaatgggttggcgctggtaaaaaggatgctatatggacaa 409
Query: 1449 agacgcacgagcgcaatgctcgtcgtgttctcaacctgatgatagagctagaaggtttgt 1508
| || |||||||| ||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 410 aaacacacgagcgaaatgctcgtcgtgttctcaacctgatgatagagttagaaggtttat 469
Query: 1509 gggtgaagatgggccagtatttgtccaccagagcggacgtgcttcctgagccgtacatag 1568
||||||| ||||| || ||||| ||||| ||||| || ||||||||||| || ||||||
Sbjct: 470 gggtgaaaatgggacaatatttatccacaagagcagatgtgcttcctgaaccctacataa 529
Query: 1569 aggtcctgaagcagttgcaggactcgcttcctccacgccctcttgaagaggt 1620
| ||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 530 atgtcctcaagcagttgcaggactcgcttcctcctcgccctcttgaagaggt 581
Score = 186 bits (94), Expect = 3e-43
Identities = 196/230 (85%)
Strand = Plus / Plus
Query: 2129 aggatttgaagaatgcaaaatcattgatcgaatggattgcatgggcagaacctcaatatg 2188
||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||
Sbjct: 755 aggatttgaagaatgcaaaatcattagttgaatggattgcatgggcagagcctcaatata 814
Query: 2189 acttcaacccaatgattgatgaatggtgcaaggaggcacccaaggaacttgatttcaatc 2248
| || ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 815 attttaacccgatgatagatgaatggtgcaaggaggcaccaaaggaacttgatttcaacc 874
Query: 2249 atgaagcagagaacactaggaccgtctccaagaatcttagtcggaaaactgaaggtggga 2308
|||| ||||||||||| | | | ||||||| ||||||||||| ||||| | | | ||
Sbjct: 875 atgaggcagagaacacaaaggctgtctccagtaatcttagtcgaaaaaccaattgcgaga 934
Query: 2309 gtggcagtgtttccagtgatgttgatgtactgataccagaaattattcag 2358
|||| ||| || |||| |||||| |||||||| |||||| ||||||||
Sbjct: 935 gtggtgctgtctctagtgctgttgacgtactgattccagaagttattcag 984
Score = 167 bits (84), Expect = 3e-37
Identities = 115/124 (92%), Gaps = 1/124 (0%)
Strand = Plus / Plus
Query: 2755 ggcaattttcttgtaagcaaggaacctccacacaaaccgattctccttgattttgggctc 2814
|||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1153 ggcaattttcttgttagcaaggaacctccacacaagccgattctccttgattttgggctt 1212
Query: 2815 actaaacgcatatcacagtcgatgaagcaagcactagcaaagatgtttttgtcatgcgct 2874
|||||||||||||| || || |||| ||| ||||||||||||||| ||||||||||||||
Sbjct: 1213 actaaacgcatatctcaatcaatgaggcaggcactagcaaagatg-ttttgtcatgcgct 1271
Query: 2875 gagg 2878
||||
Sbjct: 1272 gagg 1275
Score = 139 bits (70), Expect = 7e-29
Identities = 148/174 (85%)
Strand = Plus / Plus
Query: 2456 tcagtctactgaaaagattctaattctggaatacatggacggaattcgcttacatgacaa 2515
|||||| ||||| ||| |||||||| || |||| ||||| |||||||| || |||||||
Sbjct: 981 tcagtcaactgataaggttctaattttgcaatatatggatggaattcgtttgaatgacaa 1040
Query: 2516 tgattcattggaagaatatggtgtcgataagaaaaaactcgttgaagagataacccgtgc 2575
|||||| || |||| ||||||||| |||||| ||| ||| || || ||||||||||||||
Sbjct: 1041 tgattcgttagaagcatatggtgttgataagcaaagacttgtggaggagataacccgtgc 1100
Query: 2576 ttatgctcatcaaatatacattgacggtttcttcaacggagatcctcatcctgg 2629
|||||||||||||||||| |||| || ||||| ||||| |||||||| |||||
Sbjct: 1101 atatgctcatcaaatatacgttgatggcttctttaacggcgatcctcaccctgg 1154
Score = 125 bits (63), Expect = 1e-24
Identities = 84/91 (92%)
Strand = Plus / Plus
Query: 1967 atagcacaggttcatcgtgcaactctggaagatggcagagaagttgttgtgaaagttcag 2026
|||||||||||||||||||||||||| | ||||||||||||||| ||||||||| | ||
Sbjct: 667 atagcacaggttcatcgtgcaactcttgtagatggcagagaagtagttgtgaaaatccaa 726
Query: 2027 catgatggtatcaaagagatcatattagagg 2057
||||||||||||||||| |||||||||||||
Sbjct: 727 catgatggtatcaaagatatcatattagagg 757
Score = 81.8 bits (41), Expect = 1e-11
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 1794 aggttcgtggaaccatagaaaaagaacttggtaaacccatgagtgaactctttgctactt 1853
||||||||||||||||||| ||||||||||| |||||||||| ||| || ||||||| ||
Sbjct: 578 aggttcgtggaaccatagagaaagaacttgggaaacccatgaatgatctgtttgctaatt 637
Query: 1854 ttgaccttgaccctcttgcaaccgcatca 1882
||| || || ||||| ||||| ||||||
Sbjct: 638 ttgtgctggatcctctagcaactgcatca 666
Score = 48.1 bits (24), Expect = 0.19
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 1226 atgggatggggaaccctcatatccaggcgcctcaaagttttttcattggcgttgttcgtc 1285
||||||||||||| | | || |||||||||||||||| ||||| |||| ||||| |
Sbjct: 277 atgggatggggaaacaccttaaccaggcgcctcaaagtcttttccatggccttgtttata 336
Query: 1286 tacttggactataagg 1301
||||| ||||||||||
Sbjct: 337 tacttcgactataagg 352
>gb|AC168066.4 | Mus musculus BAC clone RP23-134F19 from chromosome 16, complete sequence
Length = 198238
Score = 44.1 bits (22), Expect = 2.9
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1642 tactctcaagaaagaaagaaaa 1663
||||||||||||||||||||||
Sbjct: 147306 tactctcaagaaagaaagaaaa 147285
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 592,458,421
Number of extensions: 37918703
Number of successful extensions: 333065
Number of sequences better than 10.0: 53
Number of HSP's gapped: 333062
Number of HSP's successfully gapped: 91
Length of query: 2994
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 2971
Effective length of database: 18,503,978,556
Effective search space: 54975320289876
Effective search space used: 54975320289876
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)