>A3EXH0:NCAP_BCHK9 Nucleocapsid protein - Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)|
          Length = 468
 Score = 33.1 bits (74), Expect = 2.7
 Identities = 21/63 (33%), Positives = 31/63 (49%)
 Frame = +1

Query: 655 LGGRHRSYTARDGEP*PPIRFNARSTGPLRSLGRRSGAHAGRRPRLCHHKHGGSPQRAVR 834
           + GR+RS   R G P P + F   S G      RR+G   G RP+  ++   GS  +  +
Sbjct: 1   MSGRNRS---RSGTPSPKVTFKQESDGSDSESERRNGNRNGARPK--NNNSRGSAPKPEK 55

Query: 835 PRA 843
           P+A
Sbjct: 56  PKA 58

>P25601:YCH5_YEAST Putative transposon Ty5-1 protein YCL075W - Saccharomyces|
           cerevisiae (Baker's yeast)
          Length = 146

 Score = 32.7 bits (73), Expect = 3.5
 Identities = 20/56 (35%), Positives = 27/56 (48%)
 Frame = +2

Query: 695 NRDLLSGLTPDQPGRFVLSADGAAPMQVVAHGCVITNTVVLPNVLYVPGLTANLVS 862
           +R + S  T      FV    G+ P  ++  G V   TV L +V YVP L  NL+S
Sbjct: 92  DRSIFSSFTRSSRKDFVRGVGGSIP--IMGSGTVNIGTVQLHDVSYVPDLPVNLIS 145

>Q9HGI2:RAD52_NEUCR DNA repair and recombination protein mus-11 - Neurospora crassa|
          Length = 600

 Score = 31.6 bits (70), Expect = 7.9
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +1

Query: 682 ARDGEP*PPIRFNARSTGPLRSLGRRSGAHAGRRP 786
           AR+G+  PP +       P  SL R +GAHA  RP
Sbjct: 418 ARNGQHVPPAKTTETEAEPSTSLSRPAGAHAASRP 452


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 250,407,893
Number of extensions: 5806986
Number of successful extensions: 14532
Number of sequences better than 10.0: 3
Number of HSP's gapped: 14526
Number of HSP's successfully gapped: 3
Length of query: 444
Length of database: 100,686,439
Length adjustment: 116
Effective length of query: 328
Effective length of database: 68,868,219
Effective search space: 22588775832
Effective search space used: 22588775832
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)