ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf150m21 |
|---|---|
| Clone Library Name | barley_pub |
>AY348312:Os05g0119300 | Length = 197 Score = 35.4 bits (80), Expect = 0.048 Identities = 15/20 (75%), Positives = 18/20 (90%) Frame = +1 Query: 103 MEGGKDKNNTTDKGLFSNMM 162 M GGKDK++ +DKGLFSNMM Sbjct: 1 MGGGKDKHDESDKGLFSNMM 20
>AK099495:Os05g0119300 | Length = 197 Score = 35.4 bits (80), Expect = 0.048 Identities = 15/20 (75%), Positives = 18/20 (90%) Frame = +1 Query: 103 MEGGKDKNNTTDKGLFSNMM 162 M GGKDK++ +DKGLFSNMM Sbjct: 1 MGGGKDKHDESDKGLFSNMM 20
>AK071554:Os05g0119300 | Length = 197 Score = 35.4 bits (80), Expect = 0.048 Identities = 15/20 (75%), Positives = 18/20 (90%) Frame = +1 Query: 103 MEGGKDKNNTTDKGLFSNMM 162 M GGKDK++ +DKGLFSNMM Sbjct: 1 MGGGKDKHDESDKGLFSNMM 20
>AK068289:Os05g0119300 | Length = 106 Score = 35.4 bits (80), Expect = 0.048 Identities = 15/20 (75%), Positives = 18/20 (90%) Frame = +1 Query: 103 MEGGKDKNNTTDKGLFSNMM 162 M GGKDK++ +DKGLFSNMM Sbjct: 1 MGGGKDKHDESDKGLFSNMM 20
>AK060883:Os05g0119300 | Length = 106 Score = 35.4 bits (80), Expect = 0.048 Identities = 15/20 (75%), Positives = 18/20 (90%) Frame = +1 Query: 103 MEGGKDKNNTTDKGLFSNMM 162 M GGKDK++ +DKGLFSNMM Sbjct: 1 MGGGKDKHDESDKGLFSNMM 20
>AK110507: | Length = 905 Score = 33.5 bits (75), Expect = 0.18 Identities = 16/55 (29%), Positives = 23/55 (41%) Frame = -3 Query: 412 GARDRGQHPRSRLHSPCVHRSLHGHLHSQGSRPEDSHREAGSHHTAEGMRQVEED 248 GAR G H + +H P H H H HS +H +G +A +E + Sbjct: 690 GARGGGSHRHAVVHRPRHHDHTHAHSHSHAHAHSHAHVHSGGRRSASYRDALERE 744
>AK105607:Os08g0467400 | Length = 498 Score = 31.6 bits (70), Expect = 0.69 Identities = 16/46 (34%), Positives = 19/46 (41%) Frame = -3 Query: 418 HGGARDRGQHPRSRLHSPCVHRSLHGHLHSQGSRPEDSHREAGSHH 281 H G+ H + H H HGH HS G +DSH HH Sbjct: 21 HEGSSSCPFHAHDKPHDDHHHGHGHGHGHSCGGGGDDSHHVHHHHH 66
>AK102279:Os08g0467400 | Length = 498 Score = 31.6 bits (70), Expect = 0.69 Identities = 16/46 (34%), Positives = 19/46 (41%) Frame = -3 Query: 418 HGGARDRGQHPRSRLHSPCVHRSLHGHLHSQGSRPEDSHREAGSHH 281 H G+ H + H H HGH HS G +DSH HH Sbjct: 21 HEGSSSCPFHAHDKPHDDHHHGHGHGHGHSCGGGGDDSHHVHHHHH 66
>AK070501:Os08g0467400 | Length = 498 Score = 31.6 bits (70), Expect = 0.69 Identities = 16/46 (34%), Positives = 19/46 (41%) Frame = -3 Query: 418 HGGARDRGQHPRSRLHSPCVHRSLHGHLHSQGSRPEDSHREAGSHH 281 H G+ H + H H HGH HS G +DSH HH Sbjct: 21 HEGSSSCPFHAHDKPHDDHHHGHGHGHGHSCGGGGDDSHHVHHHHH 66
>AK102453:Os04g0480300 | Length = 560 Score = 30.8 bits (68), Expect = 1.2 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 9/80 (11%) Frame = +2 Query: 152 QT*CMGTRHMEDMDILLKGTRH---QGYPTPLLGRILLHLAHTLRSMVATRLTVAILRSA 322 QT + H D + G R G+P G++ + + +R+ VAT + VA R+ Sbjct: 414 QTRAFSSNHARQSDDVGGGDRDVEMHGHPDKKQGKMFISTTYQVRAAVATSIGVAAARAK 473 Query: 323 TLA------MEVAMEATVDT 364 LA ME+ M + ++T Sbjct: 474 MLADQEEREMELLMASIIET 493
>AK101407:Os01g0617800 | Length = 182 Score = 30.8 bits (68), Expect = 1.2 Identities = 16/40 (40%), Positives = 23/40 (57%) Frame = +2 Query: 20 AKPNPPSLLLVLRRNWDTSLQGRLATQQWKEGRTRITPPT 139 ++P PPSL+ ++ L GR QQ KEG+ + PPT Sbjct: 13 SEPKPPSLI-------ESILVGRREQQQHKEGKRKAGPPT 45
>AK122104:Os01g0549400 | Length = 792 Score = 30.4 bits (67), Expect = 1.5 Identities = 18/44 (40%), Positives = 20/44 (45%) Frame = -3 Query: 412 GARDRGQHPRSRLHSPCVHRSLHGHLHSQGSRPEDSHREAGSHH 281 G RDR + RSR +P R H R D HR A SHH Sbjct: 72 GDRDRDRRDRSRSRTP--PRRDHRDRDRDRDRRHDDHRSAPSHH 113
>AK100405:Os06g0219800 | Length = 420 Score = 30.0 bits (66), Expect = 2.0 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +1 Query: 4 EPNPARQTESSLPPPGAAAELGH 72 E NP + +S PPPG+AA GH Sbjct: 29 ESNPPPPSATSCPPPGSAAHAGH 51
>AK072030:Os06g0219800 | Length = 396 Score = 30.0 bits (66), Expect = 2.0 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +1 Query: 4 EPNPARQTESSLPPPGAAAELGH 72 E NP + +S PPPG+AA GH Sbjct: 5 ESNPPPPSATSCPPPGSAAHAGH 27
>AK122178:Os06g0106800 | Length = 499 Score = 29.6 bits (65), Expect = 2.6 Identities = 24/91 (26%), Positives = 29/91 (31%) Frame = -3 Query: 412 GARDRGQHPRSRLHSPCVHRSLHGHLHSQGSRPEDSHREAGSHHTAEGMRQVEEDTPQER 233 G R G HP L +HR H H P D HR G H + Sbjct: 380 GGRQAGGHPGRPLPRH-LHRQRHRHALQVAQVPVDLHRHRGGVHR------------RHA 426 Query: 232 GRVPLVAGTLEEDIHILHVAGTHASCLRTAL 140 G VP AG + + H H A+ Sbjct: 427 GAVPAAAGGARWRLPVPHGHAAHRPARHAAV 457
>AK105911:Os06g0106800 | Length = 499 Score = 29.6 bits (65), Expect = 2.6 Identities = 24/91 (26%), Positives = 29/91 (31%) Frame = -3 Query: 412 GARDRGQHPRSRLHSPCVHRSLHGHLHSQGSRPEDSHREAGSHHTAEGMRQVEEDTPQER 233 G R G HP L +HR H H P D HR G H + Sbjct: 380 GGRQAGGHPGRPLPRH-LHRQRHRHALQVAQVPVDLHRHRGGVHR------------RHA 426 Query: 232 GRVPLVAGTLEEDIHILHVAGTHASCLRTAL 140 G VP AG + + H H A+ Sbjct: 427 GAVPAAAGGARWRLPVPHGHAAHRPARHAAV 457
>AK105782:Os06g0106800 | Length = 499 Score = 29.6 bits (65), Expect = 2.6 Identities = 24/91 (26%), Positives = 29/91 (31%) Frame = -3 Query: 412 GARDRGQHPRSRLHSPCVHRSLHGHLHSQGSRPEDSHREAGSHHTAEGMRQVEEDTPQER 233 G R G HP L +HR H H P D HR G H + Sbjct: 380 GGRQAGGHPGRPLPRH-LHRQRHRHALQVAQVPVDLHRHRGGVHR------------RHA 426 Query: 232 GRVPLVAGTLEEDIHILHVAGTHASCLRTAL 140 G VP AG + + H H A+ Sbjct: 427 GAVPAAAGGARWRLPVPHGHAAHRPARHAAV 457
>AK105650:Os06g0106800 | Length = 499 Score = 29.6 bits (65), Expect = 2.6 Identities = 24/91 (26%), Positives = 29/91 (31%) Frame = -3 Query: 412 GARDRGQHPRSRLHSPCVHRSLHGHLHSQGSRPEDSHREAGSHHTAEGMRQVEEDTPQER 233 G R G HP L +HR H H P D HR G H + Sbjct: 380 GGRQAGGHPGRPLPRH-LHRQRHRHALQVAQVPVDLHRHRGGVHR------------RHA 426 Query: 232 GRVPLVAGTLEEDIHILHVAGTHASCLRTAL 140 G VP AG + + H H A+ Sbjct: 427 GAVPAAAGGARWRLPVPHGHAAHRPARHAAV 457
>AK105258:Os08g0207500 | Length = 396 Score = 29.6 bits (65), Expect = 2.6 Identities = 18/55 (32%), Positives = 23/55 (41%) Frame = -3 Query: 415 GGARDRGQHPRSRLHSPCVHRSLHGHLHSQGSRPEDSHREAGSHHTAEGMRQVEE 251 GGA G +H+ H HGH+HS G SH A + T+ V E Sbjct: 185 GGAEHAGH---VHVHTHATHGHAHGHVHSHGHGHGHSHGSAPAAATSPEDASVAE 236
>AK073364:Os06g0106800 | Length = 499 Score = 29.6 bits (65), Expect = 2.6 Identities = 24/91 (26%), Positives = 29/91 (31%) Frame = -3 Query: 412 GARDRGQHPRSRLHSPCVHRSLHGHLHSQGSRPEDSHREAGSHHTAEGMRQVEEDTPQER 233 G R G HP L +HR H H P D HR G H + Sbjct: 380 GGRQAGGHPGRPLPRH-LHRQRHRHALQVAQVPVDLHRHRGGVHR------------RHA 426 Query: 232 GRVPLVAGTLEEDIHILHVAGTHASCLRTAL 140 G VP AG + + H H A+ Sbjct: 427 GAVPAAAGGARWRLPVPHGHAAHRPARHAAV 457
>AB126089:Os08g0207500 | Length = 396 Score = 29.6 bits (65), Expect = 2.6 Identities = 18/55 (32%), Positives = 23/55 (41%) Frame = -3 Query: 415 GGARDRGQHPRSRLHSPCVHRSLHGHLHSQGSRPEDSHREAGSHHTAEGMRQVEE 251 GGA G +H+ H HGH+HS G SH A + T+ V E Sbjct: 185 GGAEHAGH---VHVHTHATHGHAHGHVHSHGHGHGHSHGSAPAAATSPEDASVAE 236
>AK109833:Os02g0461600 | Length = 199 Score = 29.3 bits (64), Expect = 3.4 Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 1/42 (2%) Frame = -3 Query: 406 RDRGQHPRSRLHSPCVHRSLHGHLHSQGSRPEDS-HREAGSH 284 R RG+ R R SP RS H HS R S +AG H Sbjct: 55 RRRGERDRKRSRSPSADRSHRRHSHSHSHRGRSSPSPDAGRH 96
>AK105240:Os02g0461600 | Length = 199 Score = 29.3 bits (64), Expect = 3.4 Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 1/42 (2%) Frame = -3 Query: 406 RDRGQHPRSRLHSPCVHRSLHGHLHSQGSRPEDS-HREAGSH 284 R RG+ R R SP RS H HS R S +AG H Sbjct: 55 RRRGERDRKRSRSPSADRSHRRHSHSHSHRGRSSPSPDAGRH 96
>AK064008:Os09g0321300 | Length = 354 Score = 28.9 bits (63), Expect = 4.5 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = +3 Query: 165 WVPATWRIWISSSRVPATRGTLPRSWGVSSSTWRIPSAVWWL 290 W ++ +SSS G PR +G+SS+ IP WL Sbjct: 182 WYKTSYHSSLSSSPFDVLYGHPPRHFGISSADCAIPDLAVWL 223
>Os03g0129800:Os03g0129800 | Length = 396 Score = 28.1 bits (61), Expect = 7.6 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = +3 Query: 21 PNRILPPSSWCCGGIGTHPYRVG 89 P R+ PP++ CCG P++VG Sbjct: 272 PPRLPPPAACCCGSDDNIPFQVG 294
>AY187941:Os03g0236200 | Length = 492 Score = 28.1 bits (61), Expect = 7.6 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +2 Query: 8 PTRLAKPNPPSLLLVLRRNWDTSLQGRLATQQWKE 112 P+RL P PP+ LLV+ + + Q R T+ WK+ Sbjct: 448 PSRLMPPVPPAPLLVVAKKSELETQ-RSVTEAWKK 481
>AK071556:Os03g0236200 | Length = 492 Score = 28.1 bits (61), Expect = 7.6 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +2 Query: 8 PTRLAKPNPPSLLLVLRRNWDTSLQGRLATQQWKE 112 P+RL P PP+ LLV+ + + Q R T+ WK+ Sbjct: 448 PSRLMPPVPPAPLLVVAKKSELETQ-RSVTEAWKK 481
>Os05g0338900:Os05g0338900 | Length = 435 Score = 28.1 bits (61), Expect = 7.7 Identities = 19/35 (54%), Positives = 22/35 (62%), Gaps = 1/35 (2%) Frame = -1 Query: 396 ANTPVAA-SIAHVSTVASMATSIARVADRRIATVR 295 A TP+ + HV TV SMA S A V RR+ATVR Sbjct: 277 APTPLQRIGVGHVLTVLSMAAS-AAVERRRLATVR 310
>AK104990:Os01g0636500 | Length = 538 Score = 28.1 bits (61), Expect = 7.7 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 4/36 (11%) Frame = -1 Query: 99 CVANLPCKDVSQFRRSTRRR----EGGFGLASRVGF 4 CV+N+ +DV+ FR T R +GG GL V F Sbjct: 383 CVSNVTVRDVNMFRTMTGVRIKTWQGGLGLVQDVRF 418
>AK073853:Os01g0636500 | Length = 538 Score = 28.1 bits (61), Expect = 7.7 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 4/36 (11%) Frame = -1 Query: 99 CVANLPCKDVSQFRRSTRRR----EGGFGLASRVGF 4 CV+N+ +DV+ FR T R +GG GL V F Sbjct: 383 CVSNVTVRDVNMFRTMTGVRIKTWQGGLGLVQDVRF 418
>AK105875:Os01g0153700 | Length = 458 Score = 27.7 bits (60), Expect = 9.9 Identities = 20/74 (27%), Positives = 33/74 (44%) Frame = -3 Query: 388 PRSRLHSPCVHRSLHGHLHSQGSRPEDSHREAGSHHTAEGMRQVEEDTPQERGRVPLVAG 209 P ++ SPC S HS+ S PE+ H A + E + QE+G + ++ Sbjct: 232 PADKVSSPCKPFS-----HSRDSSPENGHCSAVASPPLEPLSPDILPVSQEQGALLMLKR 286 Query: 208 TLEEDIHILHVAGT 167 L+ +H V G+ Sbjct: 287 HLDPMLHEAMVGGS 300
>AK102482:Os05g0345400 | Length = 879 Score = 27.7 bits (60), Expect = 9.9 Identities = 14/45 (31%), Positives = 22/45 (48%) Frame = +3 Query: 180 WRIWISSSRVPATRGTLPRSWGVSSSTWRIPSAVWWLPASRWLSS 314 W +W + S VP + P SW + S +I + A+R L+S Sbjct: 802 WNLWSNESVVPRADESSPSSWQIVDSLVKICVEEQLIDANRILTS 846
>AK073748:Os05g0345400 | Length = 1016 Score = 27.7 bits (60), Expect = 9.9 Identities = 14/45 (31%), Positives = 22/45 (48%) Frame = +3 Query: 180 WRIWISSSRVPATRGTLPRSWGVSSSTWRIPSAVWWLPASRWLSS 314 W +W + S VP + P SW + S +I + A+R L+S Sbjct: 802 WNLWSNESVVPRADESSPSSWQIVDSLVKICVEEQLIDANRILTS 846
>AK067200:Os08g0105800 | Length = 549 Score = 27.7 bits (60), Expect = 9.9 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = -3 Query: 343 GHLHSQGSRPEDSHREAGSHHTAEG 269 GH+H GS P S R+ H A+G Sbjct: 71 GHMHLVGSNPHVSLRDLAEKHAADG 95
>AK065355:Os08g0105800 | Length = 357 Score = 27.7 bits (60), Expect = 9.9 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = -3 Query: 343 GHLHSQGSRPEDSHREAGSHHTAEG 269 GH+H GS P S R+ H A+G Sbjct: 71 GHMHLVGSNPHVSLRDLAEKHAADG 95 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 20,478,851 Number of extensions: 498144 Number of successful extensions: 1850 Number of sequences better than 10.0: 35 Number of HSP's gapped: 1842 Number of HSP's successfully gapped: 35 Length of query: 273 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 174 Effective length of database: 11,435,796 Effective search space: 1989828504 Effective search space used: 1989828504 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
