>P41226:UBE1L_HUMAN Ubiquitin-activating enzyme E1 homolog - Homo sapiens (Human)|
          Length = 1011
 Score = 32.0 bits (71), Expect = 3.0
 Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
 Frame = -3

Query: 373 HSPCVHRS---LHGHLHSQGSRPE-----DSHREAGSHHTAEGMRQVEEDTPQERGRVPL 218
           H+ C+H++   LH   H  G  P+     D+    G     E +++ EE+  +E    PL
Sbjct: 286 HAHCLHQAFCALHKFQHLHGRPPQPWDPVDAETVVGLARDLEPLKRTEEEPLEE----PL 341

Query: 217 VAGTLEEDIHILHVAGTHASCLRTALCRWCYSCP 116
                 ++  +  VA + A CL   +  W  SCP
Sbjct: 342 ------DEALVRTVALSSARCLEPMVACWVSSCP 369

>Q9P2E3:ZNFX1_HUMAN NFX1-type zinc finger-containing protein 1 - Homo sapiens (Human)|
          Length = 1918

 Score = 31.2 bits (69), Expect = 5.1
 Identities = 18/65 (27%), Positives = 24/65 (36%)
 Frame = -3

Query: 421 LHGGARDRGQHPRSRLHSPCVHRSLHGHLHSQGSRPEDSHREAGSHHTAEGMRQVEEDTP 242
           L GGA   G+HPR+  H P  +        + G  P    R    H + E   Q  +   
Sbjct: 43  LRGGASHPGRHPRANNH-PAAYWQREERFRAMGRNPHQGRRNQEGHASDEARDQRHDQEN 101

Query: 241 QERGR 227
             R R
Sbjct: 102 DTRWR 106

>Q5JKF2:RH40_ORYSJ DEAD-box ATP-dependent RNA helicase 40 - Oryza sativa subsp.|
           japonica (Rice)
          Length = 792

 Score = 30.4 bits (67), Expect = 8.8
 Identities = 18/44 (40%), Positives = 20/44 (45%)
 Frame = -3

Query: 412 GARDRGQHPRSRLHSPCVHRSLHGHLHSQGSRPEDSHREAGSHH 281
           G RDR +  RSR  +P   R  H        R  D HR A SHH
Sbjct: 72  GDRDRDRRDRSRSRTP--PRRDHRDRDRDRDRRHDDHRSAPSHH 113


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 119,087,502
Number of extensions: 2621967
Number of successful extensions: 7298
Number of sequences better than 10.0: 3
Number of HSP's gapped: 7271
Number of HSP's successfully gapped: 3
Length of query: 273
Length of database: 100,686,439
Length adjustment: 111
Effective length of query: 162
Effective length of database: 70,239,694
Effective search space: 11378830428
Effective search space used: 11378830428
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)