ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf150i19 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK104976:Os10g0382300 | 706 | 0.0 | 2 | AK069060:Os10g0382300 | 706 | 0.0 | 3 | Os01g0604300:Os01g0604300 | 34 | 0.51 | 4 | AK071741:Os06g0588900 | 32 | 1.9 | 5 | AK121149:Os05g0596600 | 31 | 5.6 |
|---|
>AK104976:Os10g0382300 | Length = 700 Score = 706 bits (1823), Expect = 0.0 Identities = 382/562 (67%), Positives = 421/562 (74%), Gaps = 11/562 (1%) Frame = +3 Query: 48 PAMDPLPPSP------VNWDSLDALVLDFVRSDRLIXXXXXXXXXXXXXXXXXXXXXXXX 209 P P PP+P VNWD+LDALVLDF RSDRL+ Sbjct: 6 PPPPPPPPTPTQSSPPVNWDALDALVLDFARSDRLLLPPASPSPPSSPSSSSTTTATSSS 65 Query: 210 XXXXXXX--YCSXXXXXXXXXXXEAGDVXXXXXXXXXXXXXXXXXXXXXFHLHKQRFVEL 383 Y S E GDV FHLHKQRFVEL Sbjct: 66 SSAPSPSSSYRSRLLIRRARTALEEGDVDAALALLRAHAPAALLDHRLLFHLHKQRFVEL 125 Query: 384 VRKGTESDREAALDCLRTALAPCALDAYPLTRNS--NIYCWF*YDQDDQSSPVANEWSIK 557 VR+GTE+DREAALDCLRTALAPCALDAYP +I YD+DDQSSPVANEWSIK Sbjct: 126 VRRGTEADREAALDCLRTALAPCALDAYPEAYEEFKHILLVLIYDKDDQSSPVANEWSIK 185 Query: 558 RRFELAGLLSSILRAHLQAYDPILSMSLRYLISIHKLFCSRQGISSPISDLTERLLFEDR 737 +RFELAGLLSSILR HLQAYDPILSM+LRYLISIHKL CSRQGISSPIS+LTERLLF+DR Sbjct: 186 KRFELAGLLSSILRTHLQAYDPILSMTLRYLISIHKLLCSRQGISSPISNLTERLLFDDR 245 Query: 738 DPPAVTQECSVEAPPFDEVDVQALAHAVELTRQGAIDSLKFAKGDLYQAFQNELCRMKMD 917 DPPAV QECS+EAPPFDEVDVQALAHAVELTRQGA+DSLKFAKGDL+QAFQNELCRMK+D Sbjct: 246 DPPAVPQECSLEAPPFDEVDVQALAHAVELTRQGAVDSLKFAKGDLFQAFQNELCRMKLD 305 Query: 918 LSLLDKLVHEYCIYRGIVEGCSYALPGTADLQCSQNVDVSFVNNQGANNEAQLDCEPAGK 1097 L LLDKL+HEYCIYRGIVEG S+ LPG +Q+ DV+FV+ Q + E ++D E Sbjct: 306 LPLLDKLIHEYCIYRGIVEGGSHVLPGLQ--SNNQSNDVNFVDKQEDSTETRIDFEMTNN 363 Query: 1098 QYGGCSTSDITHHDSWSKRLRRVRSSTSGQGRRKRWRGRADDLNYACETQVDANRDT-LS 1274 Q G CSTSD +HHDSWS+RLRRVRSS SGQ RRKRWRGR DDL+Y CET +DAN+ L Sbjct: 364 QNGNCSTSDTSHHDSWSRRLRRVRSSASGQRRRKRWRGRVDDLDYGCETPLDANKHAILC 423 Query: 1275 PAFDMDEDVVIGERDTVLDTGLSDTRNMQDQKYEVILEMRDLTRKGMASKVVDEINSIDP 1454 A DMDED +I + D + DTGL D+R QDQKYEVILEMRDLTRKGMASKVV+EIN++DP Sbjct: 424 SALDMDEDDMIVKPDLMADTGLPDSRCNQDQKYEVILEMRDLTRKGMASKVVEEINNMDP 483 Query: 1455 DFFSQNPILLFQLKQVEFLKLVAGGDHVAALKVASAHLGPLAASNQALLKPLKETLVTLI 1634 DFF +NPILLFQLKQVEFLKLVA GDH AALKVAS HLGPLAASNQALLKPLKETLVTLI Sbjct: 484 DFFLKNPILLFQLKQVEFLKLVASGDHGAALKVASTHLGPLAASNQALLKPLKETLVTLI 543 Query: 1635 QLSEDVLTKAVSLPVLASSLQV 1700 Q EDVLTK+VSLPVLASSLQ+ Sbjct: 544 QPCEDVLTKSVSLPVLASSLQI 565 Score = 238 bits (607), Expect = 2e-62 Identities = 119/135 (88%), Positives = 125/135 (92%), Gaps = 1/135 (0%) Frame = +1 Query: 1957 AISRRLGIEEPQLMKILRTTLHTHTEWFKLQMCKDRFDHFLKIDSLKEIDPPV-SHTMSK 2133 A+SRRLGIEEPQLMKI+RTTLHTH+EWFKLQMCKDRF+HFLKIDSLKE+DP SH MSK Sbjct: 566 AMSRRLGIEEPQLMKIIRTTLHTHSEWFKLQMCKDRFEHFLKIDSLKEVDPSAGSHNMSK 625 Query: 2134 VLTDECGNGSSQITTCSSGKVLDEGSSPQVSSEVVCDETAILKVMEFLALPRADAIQLLI 2313 VLTDEC NGSSQITTCSSGKVLDEGSSPQ SSEV CDE AILKVMEFLALPRADAIQLL+ Sbjct: 626 VLTDECANGSSQITTCSSGKVLDEGSSPQESSEVTCDENAILKVMEFLALPRADAIQLLM 685 Query: 2314 QYSGNAETVIQQIFS 2358 QY GNAE VIQQIFS Sbjct: 686 QYGGNAEEVIQQIFS 700
>AK069060:Os10g0382300 | Length = 700 Score = 706 bits (1823), Expect = 0.0 Identities = 382/562 (67%), Positives = 421/562 (74%), Gaps = 11/562 (1%) Frame = +3 Query: 48 PAMDPLPPSP------VNWDSLDALVLDFVRSDRLIXXXXXXXXXXXXXXXXXXXXXXXX 209 P P PP+P VNWD+LDALVLDF RSDRL+ Sbjct: 6 PPPPPPPPTPTQSSPPVNWDALDALVLDFARSDRLLLPPASPSPPSSPSSSSTTTATSSS 65 Query: 210 XXXXXXX--YCSXXXXXXXXXXXEAGDVXXXXXXXXXXXXXXXXXXXXXFHLHKQRFVEL 383 Y S E GDV FHLHKQRFVEL Sbjct: 66 SSAPSPSSSYRSRLLIRRARTALEEGDVDAALALLRAHAPAALLDHRLLFHLHKQRFVEL 125 Query: 384 VRKGTESDREAALDCLRTALAPCALDAYPLTRNS--NIYCWF*YDQDDQSSPVANEWSIK 557 VR+GTE+DREAALDCLRTALAPCALDAYP +I YD+DDQSSPVANEWSIK Sbjct: 126 VRRGTEADREAALDCLRTALAPCALDAYPEAYEEFKHILLVLIYDKDDQSSPVANEWSIK 185 Query: 558 RRFELAGLLSSILRAHLQAYDPILSMSLRYLISIHKLFCSRQGISSPISDLTERLLFEDR 737 +RFELAGLLSSILR HLQAYDPILSM+LRYLISIHKL CSRQGISSPIS+LTERLLF+DR Sbjct: 186 KRFELAGLLSSILRTHLQAYDPILSMTLRYLISIHKLLCSRQGISSPISNLTERLLFDDR 245 Query: 738 DPPAVTQECSVEAPPFDEVDVQALAHAVELTRQGAIDSLKFAKGDLYQAFQNELCRMKMD 917 DPPAV QECS+EAPPFDEVDVQALAHAVELTRQGA+DSLKFAKGDL+QAFQNELCRMK+D Sbjct: 246 DPPAVPQECSLEAPPFDEVDVQALAHAVELTRQGAVDSLKFAKGDLFQAFQNELCRMKLD 305 Query: 918 LSLLDKLVHEYCIYRGIVEGCSYALPGTADLQCSQNVDVSFVNNQGANNEAQLDCEPAGK 1097 L LLDKL+HEYCIYRGIVEG S+ LPG +Q+ DV+FV+ Q + E ++D E Sbjct: 306 LPLLDKLIHEYCIYRGIVEGGSHVLPGLQ--SNNQSNDVNFVDKQEDSTETRIDFEMTNN 363 Query: 1098 QYGGCSTSDITHHDSWSKRLRRVRSSTSGQGRRKRWRGRADDLNYACETQVDANRDT-LS 1274 Q G CSTSD +HHDSWS+RLRRVRSS SGQ RRKRWRGR DDL+Y CET +DAN+ L Sbjct: 364 QNGNCSTSDTSHHDSWSRRLRRVRSSASGQRRRKRWRGRVDDLDYGCETPLDANKHAILC 423 Query: 1275 PAFDMDEDVVIGERDTVLDTGLSDTRNMQDQKYEVILEMRDLTRKGMASKVVDEINSIDP 1454 A DMDED +I + D + DTGL D+R QDQKYEVILEMRDLTRKGMASKVV+EIN++DP Sbjct: 424 SALDMDEDDMIVKPDLMADTGLPDSRCNQDQKYEVILEMRDLTRKGMASKVVEEINNMDP 483 Query: 1455 DFFSQNPILLFQLKQVEFLKLVAGGDHVAALKVASAHLGPLAASNQALLKPLKETLVTLI 1634 DFF +NPILLFQLKQVEFLKLVA GDH AALKVAS HLGPLAASNQALLKPLKETLVTLI Sbjct: 484 DFFLKNPILLFQLKQVEFLKLVASGDHGAALKVASTHLGPLAASNQALLKPLKETLVTLI 543 Query: 1635 QLSEDVLTKAVSLPVLASSLQV 1700 Q EDVLTK+VSLPVLASSLQ+ Sbjct: 544 QPCEDVLTKSVSLPVLASSLQI 565 Score = 238 bits (607), Expect = 2e-62 Identities = 119/135 (88%), Positives = 125/135 (92%), Gaps = 1/135 (0%) Frame = +1 Query: 1957 AISRRLGIEEPQLMKILRTTLHTHTEWFKLQMCKDRFDHFLKIDSLKEIDPPV-SHTMSK 2133 A+SRRLGIEEPQLMKI+RTTLHTH+EWFKLQMCKDRF+HFLKIDSLKE+DP SH MSK Sbjct: 566 AMSRRLGIEEPQLMKIIRTTLHTHSEWFKLQMCKDRFEHFLKIDSLKEVDPSAGSHNMSK 625 Query: 2134 VLTDECGNGSSQITTCSSGKVLDEGSSPQVSSEVVCDETAILKVMEFLALPRADAIQLLI 2313 VLTDEC NGSSQITTCSSGKVLDEGSSPQ SSEV CDE AILKVMEFLALPRADAIQLL+ Sbjct: 626 VLTDECANGSSQITTCSSGKVLDEGSSPQESSEVTCDENAILKVMEFLALPRADAIQLLM 685 Query: 2314 QYSGNAETVIQQIFS 2358 QY GNAE VIQQIFS Sbjct: 686 QYGGNAEEVIQQIFS 700
>Os01g0604300:Os01g0604300 | Length = 269 Score = 34.3 bits (77), Expect = 0.51 Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 15/121 (12%) Frame = +3 Query: 690 SSPISDLTERLLFEDRDP--PAVTQECSVEAPPFDE----------VDVQALAHAVELTR 833 SSPIS L L+ + DP E V+A F VD++A A V Sbjct: 97 SSPIS-LDLHLICSEEDPIWSGCHDESRVQATVFSNGTNGWCHLPWVDIEARASPVA-PH 154 Query: 834 QGAIDSLK---FAKGDLYQAFQNELCRMKMDLSLLDKLVHEYCIYRGIVEGCSYALPGTA 1004 G LK A G ++ F+N+ + +D + + VHE ++ + +GCS+A+ T Sbjct: 155 DGNKHWLKPGMQANGLIFWPFKNKEHMLVLDTNTMKFTVHEIPVFSEVQQGCSFAVGETK 214 Query: 1005 D 1007 D Sbjct: 215 D 215
>AK071741:Os06g0588900 | Length = 386 Score = 32.3 bits (72), Expect = 1.9 Identities = 18/65 (27%), Positives = 36/65 (55%) Frame = +3 Query: 1476 ILLFQLKQVEFLKLVAGGDHVAALKVASAHLGPLAASNQALLKPLKETLVTLIQLSEDVL 1655 +L +L Q++F++++ G ALK A HL P A+ ++A ++ L L+ +L + Sbjct: 186 MLELKLHQLQFVEILTKGSRDEALKYARTHLVPFASLHKAEIQKLMACLLWADRLDQSPY 245 Query: 1656 TKAVS 1670 + +S Sbjct: 246 AEFMS 250
>AK121149:Os05g0596600 | Length = 1065 Score = 30.8 bits (68), Expect = 5.6 Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 12/144 (8%) Frame = +3 Query: 1245 QVDANRDTLSPAFDMDEDVVIGERDTVLDTGLSDTRNMQDQKYEVILEMRDL-------- 1400 +VD R L + +ED+ +R V + DQ+YE++L+++DL Sbjct: 699 RVDIKRRMLETIYK-EEDMESSKRKFV-----DQAAKLNDQRYELVLKLKDLLIEAVALK 752 Query: 1401 ---TRKGMASKVVD-EINSIDPDFFSQNPILLFQLKQVEFLKLVAGGDHVAALKVASAHL 1568 T+K MAS +D +I ++ D + K+ E K +H L A H Sbjct: 753 WSCTQKNMASIELDTKIWEMEKDVKKLEKNAIEAAKEYENCKRKT-QEHKQQLSNAKQHA 811 Query: 1569 GPLAASNQALLKPLKETLVTLIQL 1640 +A + L K E T+ +L Sbjct: 812 ESIAMITEDLAKKFLEMPTTIEEL 835 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 72,344,643 Number of extensions: 1518934 Number of successful extensions: 3799 Number of sequences better than 10.0: 5 Number of HSP's gapped: 3788 Number of HSP's successfully gapped: 9 Length of query: 967 Length of database: 15,399,855 Length adjustment: 110 Effective length of query: 857 Effective length of database: 10,995,345 Effective search space: 9423010665 Effective search space used: 9423010665 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
