ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf150h20 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001067820.1| Oryza sativa (japonica cultivar-group) Os08g0226800 (Os08g0226800) mRNA, complete cds Length = 1095 Score = 153 bits (77), Expect = 2e-33 Identities = 254/313 (81%) Strand = Plus / Plus Query: 1000 tgcatttcatctatacagattcattgcctgactttgatgatcttgaaggcgatgataact 1059 ||||||||||||| || ||||| ||||| ||| | |||||||| | ||| || ||| Sbjct: 737 tgcatttcatctacaccgattcgttgccggacatggatgatctcagtgacgacgactact 796 Query: 1060 gtgaaatgatccggcatttgctggtagctgcagataagtatgccatggacaggctgaagc 1119 ||| |||||| ||| |||||| || ||||| |||| |||||||||||||||| ||||| Sbjct: 797 atgagatgatcaggcttttgcttgtggctgctgataggtatgccatggacaggatgaagt 856 Query: 1120 ttatgtgtcaaaacatccttggcaagagtcttgatgtggagaacgtggcaactacattgg 1179 | ||| ||| |||||||||| || |||||||||| ||| ||| ||||||||||||| Sbjct: 857 tgcagtgcgaaagcatccttggcgagcatcttgatgtgcagaccgtcgcaactacattgg 916 Query: 1180 ctttagctgatcagcataactgtgacaagcttaaagatgtttgcattgaatttattgcct 1239 |||||||||||||||||||||| | |||||||||||||||||||||||||| || Sbjct: 917 ctttagctgatcagcataactgcaatggccttaaagatgtttgcattgaatttatcacca 976 Query: 1240 cttcagataagatggatgatgtggtggcaagcaaaggttatgcaaatctcaaaagatctt 1299 | | | |||||||||||||||||||||| |||| ||||| ||||||| ||| ||| Sbjct: 977 atcaaaacaagatggatgatgtggtggcaactgaaggctatgctgatctcaagagaactt 1036 Query: 1300 gcccgtctgtctt 1312 |||| |||||||| Sbjct: 1037 gcccttctgtctt 1049
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 153 bits (77), Expect = 2e-33 Identities = 254/313 (81%) Strand = Plus / Plus Query: 1000 tgcatttcatctatacagattcattgcctgactttgatgatcttgaaggcgatgataact 1059 ||||||||||||| || ||||| ||||| ||| | |||||||| | ||| || ||| Sbjct: 7734767 tgcatttcatctacaccgattcgttgccggacatggatgatctcagtgacgacgactact 7734826 Query: 1060 gtgaaatgatccggcatttgctggtagctgcagataagtatgccatggacaggctgaagc 1119 ||| |||||| ||| |||||| || ||||| |||| |||||||||||||||| ||||| Sbjct: 7734827 atgagatgatcaggcttttgcttgtggctgctgataggtatgccatggacaggatgaagt 7734886 Query: 1120 ttatgtgtcaaaacatccttggcaagagtcttgatgtggagaacgtggcaactacattgg 1179 | ||| ||| |||||||||| || |||||||||| ||| ||| ||||||||||||| Sbjct: 7734887 tgcagtgcgaaagcatccttggcgagcatcttgatgtgcagaccgtcgcaactacattgg 7734946 Query: 1180 ctttagctgatcagcataactgtgacaagcttaaagatgtttgcattgaatttattgcct 1239 |||||||||||||||||||||| | |||||||||||||||||||||||||| || Sbjct: 7734947 ctttagctgatcagcataactgcaatggccttaaagatgtttgcattgaatttatcacca 7735006 Query: 1240 cttcagataagatggatgatgtggtggcaagcaaaggttatgcaaatctcaaaagatctt 1299 | | | |||||||||||||||||||||| |||| ||||| ||||||| ||| ||| Sbjct: 7735007 atcaaaacaagatggatgatgtggtggcaactgaaggctatgctgatctcaagagaactt 7735066 Query: 1300 gcccgtctgtctt 1312 |||| |||||||| Sbjct: 7735067 gcccttctgtctt 7735079 Score = 137 bits (69), Expect = 1e-28 Identities = 171/205 (83%) Strand = Plus / Minus Query: 1065 atgatccggcatttgctggtagctgcagataagtatgccatggacaggctgaagcttatg 1124 |||||| ||| |||||| || ||||| |||| |||||||||||||||| ||||| | | Sbjct: 7687725 atgatcaggcttttgcttgtggctgctgataggtatgccatggacaggatgaagttgcag 7687666 Query: 1125 tgtcaaaacatccttggcaagagtcttgatgtggagaacgtggcaactacattggcttta 1184 || ||| |||||| ||| || |||||||||| ||| ||| |||||||||||||||||| Sbjct: 7687665 tgcgaaagcatcctcggcgagcatcttgatgtgcagaccgtcgcaactacattggcttta 7687606 Query: 1185 gctgatcagcataactgtgacaagcttaaagatgtttgcattgaatttattgcctcttca 1244 ||||||||||| ||||| || |||||||||||||||||||| ||||| ||| || | Sbjct: 7687605 gctgatcagcacaactgcaacggccttaaagatgtttgcattgagtttatcgccactcaa 7687546 Query: 1245 gataagatggatgatgtggtggcaa 1269 | |||||||||||||||||||||| Sbjct: 7687545 aacaagatggatgatgtggtggcaa 7687521 Score = 121 bits (61), Expect = 8e-24 Identities = 112/129 (86%) Strand = Plus / Plus Query: 1098 tatgccatggacaggctgaagcttatgtgtcaaaacatccttggcaagagtcttgatgtg 1157 ||||||||||| ||| ||||| | ||||| |||| ||||||||| ||| | |||||||| Sbjct: 7712612 tatgccatggataggttgaagttgatgtgccaaagcatccttggaaagtatgttgatgtg 7712671 Query: 1158 gagaacgtggcaactacattggctttagctgatcagcataactgtgacaagcttaaagat 1217 |||||||||| ||||| ||||||||||||| |||||||||||||| |||||||| ||| Sbjct: 7712672 aagaacgtggcgactacgctggctttagctgaccagcataactgtgataagcttaaggat 7712731 Query: 1218 gtttgcatt 1226 ||||||||| Sbjct: 7712732 gtttgcatt 7712740 Score = 117 bits (59), Expect = 1e-22 Identities = 104/119 (87%) Strand = Plus / Minus Query: 1065 atgatccggcatttgctggtagctgcagataagtatgccatggacaggctgaagcttatg 1124 |||||||||||||| || || ||||| |||| ||||||||||||||||| ||| | || Sbjct: 7692121 atgatccggcatttacttgtggctgcggatagatatgccatggacaggctcaagttgatt 7692062 Query: 1125 tgtcaaaacatccttggcaagagtcttgatgtggagaacgtggcaactacattggcttt 1183 || ||| |||||||||||||||||||| ||||||| || |||||||||||||||||||| Sbjct: 7692061 tgccaacacatccttggcaagagtcttcatgtggacaatgtggcaactacattggcttt 7692003 Score = 99.6 bits (50), Expect = 3e-17 Identities = 161/198 (81%) Strand = Plus / Minus Query: 1037 tgatcttgaaggcgatgataactgtgaaatgatccggcatttgctggtagctgcagataa 1096 ||||||||| || || |||||| | || ||||||||||| ||||| || || || || | Sbjct: 7754843 tgatcttgagggagacgataacagcgagatgatccggcacttgcttgtcgccgcggacag 7754784 Query: 1097 gtatgccatggacaggctgaagcttatgtgtcaaaacatccttggcaagagtcttgatgt 1156 ||||| |||||||||||||||| ||||||||| ||||||| |||||| |||| ||| Sbjct: 7754783 atatgctgtggacaggctgaagctgttgtgtcaaagcatcctttgcaagaatcttcgtgt 7754724 Query: 1157 ggagaacgtggcaactacattggctttagctgatcagcataactgtgacaagcttaaaga 1216 | ||||| ||||||||| ||||| | |||||||| ||| | |||| || |||||| || Sbjct: 7754723 tggtaacgttgcaactacactggctctggctgatcaacatcattgtggcatgcttaagga 7754664 Query: 1217 tgtttgcattgaatttat 1234 || ||||||||||||||| Sbjct: 7754663 tgcttgcattgaatttat 7754646 Score = 65.9 bits (33), Expect = 4e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 1180 ctttagctgatcagcataactgtgacaagcttaaagatgtttgcattgaattt 1232 |||||||||||||| | |||| |||||||||||| ||||||||| |||||||| Sbjct: 7771268 ctttagctgatcagtacaactatgacaagcttaaggatgtttgccttgaattt 7771216 Score = 61.9 bits (31), Expect = 6e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 341 gcacatctttgagattgccgggtacagcctcaagaaggacatgggtgtagacaagttcgt 400 |||||| |||||||| ||||||||| || |||||| ||| ||||| | |||||| || Sbjct: 7692880 gcacatatttgagatcaacgggtacagattccagaagggcatcggtgttggcaagtttgt 7692821 Query: 401 ccggtcaaccatcttcactgtcggtgg 427 |||||| | |||||||||||||||||| Sbjct: 7692820 ccggtcgaacatcttcactgtcggtgg 7692794 Score = 56.0 bits (28), Expect = 4e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 1179 gctttagctgatcagcataactgtgacaagcttaaagatgtttgcattgaatttat 1234 ||||||||||||||||||| ||| |||| ||||| ||||||||| || ||||||| Sbjct: 7730030 gctttagctgatcagcatagctgcaacaaccttaaggatgtttgcgttaaatttat 7730085 Score = 52.0 bits (26), Expect = 0.006 Identities = 68/82 (82%) Strand = Plus / Minus Query: 861 gagacctttcaggcgcacaagattttccctgccatgcggtcacctgtcttcaaagcagaa 920 |||||||| | |||||||||| || | | || |||||||| |||||||||||||| || Sbjct: 7755019 gagaccttcccggcgcacaagcttgtgctggcgatgcggtctcctgtcttcaaagcggag 7754960 Query: 921 ctcttcgggccgatgaaggaga 942 || | ||||||||||| ||||| Sbjct: 7754959 ctatgcgggccgatgagggaga 7754938 Score = 50.1 bits (25), Expect = 0.025 Identities = 52/61 (85%) Strand = Plus / Minus Query: 984 gttttcaaggctctgttgcatttcatctatacagattcattgcctgactttgatgatctt 1043 ||||||||||| ||| | ||||||||||| || ||||||||| || | ||||||||||| Sbjct: 7771875 gttttcaaggccctgctccatttcatctacactgattcattgtctatcattgatgatctt 7771816 Query: 1044 g 1044 | Sbjct: 7771815 g 7771815 Score = 46.1 bits (23), Expect = 0.38 Identities = 38/43 (88%) Strand = Plus / Minus Query: 359 cgggtacagcctcaagaaggacatgggtgtagacaagttcgtc 401 |||||||||||||||||||| ||| || || ||| |||||||| Sbjct: 7688446 cgggtacagcctcaagaagggcatcggcgtggacgagttcgtc 7688404 Score = 46.1 bits (23), Expect = 0.38 Identities = 35/39 (89%) Strand = Plus / Plus Query: 1271 caaaggttatgcaaatctcaaaagatcttgcccgtctgt 1309 |||||| |||||||||||||||||| |||||| ||||| Sbjct: 7712785 caaaggctatgcaaatctcaaaagaagttgcccttctgt 7712823 Score = 46.1 bits (23), Expect = 0.38 Identities = 41/47 (87%) Strand = Plus / Minus Query: 969 gatatccagcccgccgttttcaaggctctgttgcatttcatctatac 1015 ||||| ||||||||||| |||| ||| ||| |||| ||||||||||| Sbjct: 7750973 gatatgcagcccgccgtcttcagggccctgctgcaattcatctatac 7750927 Score = 44.1 bits (22), Expect = 1.5 Identities = 43/50 (86%) Strand = Plus / Minus Query: 1185 gctgatcagcataactgtgacaagcttaaagatgtttgcattgaatttat 1234 |||||||||||| | || |||||||| || |||| |||||| |||||||| Sbjct: 7750757 gctgatcagcatcaatgcgacaagctgaaggatgcttgcatcgaatttat 7750708
>dbj|AP004183.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1221_H04 Length = 129387 Score = 153 bits (77), Expect = 2e-33 Identities = 254/313 (81%) Strand = Plus / Plus Query: 1000 tgcatttcatctatacagattcattgcctgactttgatgatcttgaaggcgatgataact 1059 ||||||||||||| || ||||| ||||| ||| | |||||||| | ||| || ||| Sbjct: 75490 tgcatttcatctacaccgattcgttgccggacatggatgatctcagtgacgacgactact 75549 Query: 1060 gtgaaatgatccggcatttgctggtagctgcagataagtatgccatggacaggctgaagc 1119 ||| |||||| ||| |||||| || ||||| |||| |||||||||||||||| ||||| Sbjct: 75550 atgagatgatcaggcttttgcttgtggctgctgataggtatgccatggacaggatgaagt 75609 Query: 1120 ttatgtgtcaaaacatccttggcaagagtcttgatgtggagaacgtggcaactacattgg 1179 | ||| ||| |||||||||| || |||||||||| ||| ||| ||||||||||||| Sbjct: 75610 tgcagtgcgaaagcatccttggcgagcatcttgatgtgcagaccgtcgcaactacattgg 75669 Query: 1180 ctttagctgatcagcataactgtgacaagcttaaagatgtttgcattgaatttattgcct 1239 |||||||||||||||||||||| | |||||||||||||||||||||||||| || Sbjct: 75670 ctttagctgatcagcataactgcaatggccttaaagatgtttgcattgaatttatcacca 75729 Query: 1240 cttcagataagatggatgatgtggtggcaagcaaaggttatgcaaatctcaaaagatctt 1299 | | | |||||||||||||||||||||| |||| ||||| ||||||| ||| ||| Sbjct: 75730 atcaaaacaagatggatgatgtggtggcaactgaaggctatgctgatctcaagagaactt 75789 Query: 1300 gcccgtctgtctt 1312 |||| |||||||| Sbjct: 75790 gcccttctgtctt 75802 Score = 137 bits (69), Expect = 1e-28 Identities = 171/205 (83%) Strand = Plus / Minus Query: 1065 atgatccggcatttgctggtagctgcagataagtatgccatggacaggctgaagcttatg 1124 |||||| ||| |||||| || ||||| |||| |||||||||||||||| ||||| | | Sbjct: 28448 atgatcaggcttttgcttgtggctgctgataggtatgccatggacaggatgaagttgcag 28389 Query: 1125 tgtcaaaacatccttggcaagagtcttgatgtggagaacgtggcaactacattggcttta 1184 || ||| |||||| ||| || |||||||||| ||| ||| |||||||||||||||||| Sbjct: 28388 tgcgaaagcatcctcggcgagcatcttgatgtgcagaccgtcgcaactacattggcttta 28329 Query: 1185 gctgatcagcataactgtgacaagcttaaagatgtttgcattgaatttattgcctcttca 1244 ||||||||||| ||||| || |||||||||||||||||||| ||||| ||| || | Sbjct: 28328 gctgatcagcacaactgcaacggccttaaagatgtttgcattgagtttatcgccactcaa 28269 Query: 1245 gataagatggatgatgtggtggcaa 1269 | |||||||||||||||||||||| Sbjct: 28268 aacaagatggatgatgtggtggcaa 28244 Score = 121 bits (61), Expect = 8e-24 Identities = 112/129 (86%) Strand = Plus / Plus Query: 1098 tatgccatggacaggctgaagcttatgtgtcaaaacatccttggcaagagtcttgatgtg 1157 ||||||||||| ||| ||||| | ||||| |||| ||||||||| ||| | |||||||| Sbjct: 53335 tatgccatggataggttgaagttgatgtgccaaagcatccttggaaagtatgttgatgtg 53394 Query: 1158 gagaacgtggcaactacattggctttagctgatcagcataactgtgacaagcttaaagat 1217 |||||||||| ||||| ||||||||||||| |||||||||||||| |||||||| ||| Sbjct: 53395 aagaacgtggcgactacgctggctttagctgaccagcataactgtgataagcttaaggat 53454 Query: 1218 gtttgcatt 1226 ||||||||| Sbjct: 53455 gtttgcatt 53463 Score = 117 bits (59), Expect = 1e-22 Identities = 104/119 (87%) Strand = Plus / Minus Query: 1065 atgatccggcatttgctggtagctgcagataagtatgccatggacaggctgaagcttatg 1124 |||||||||||||| || || ||||| |||| ||||||||||||||||| ||| | || Sbjct: 32844 atgatccggcatttacttgtggctgcggatagatatgccatggacaggctcaagttgatt 32785 Query: 1125 tgtcaaaacatccttggcaagagtcttgatgtggagaacgtggcaactacattggcttt 1183 || ||| |||||||||||||||||||| ||||||| || |||||||||||||||||||| Sbjct: 32784 tgccaacacatccttggcaagagtcttcatgtggacaatgtggcaactacattggcttt 32726 Score = 99.6 bits (50), Expect = 3e-17 Identities = 161/198 (81%) Strand = Plus / Minus Query: 1037 tgatcttgaaggcgatgataactgtgaaatgatccggcatttgctggtagctgcagataa 1096 ||||||||| || || |||||| | || ||||||||||| ||||| || || || || | Sbjct: 95566 tgatcttgagggagacgataacagcgagatgatccggcacttgcttgtcgccgcggacag 95507 Query: 1097 gtatgccatggacaggctgaagcttatgtgtcaaaacatccttggcaagagtcttgatgt 1156 ||||| |||||||||||||||| ||||||||| ||||||| |||||| |||| ||| Sbjct: 95506 atatgctgtggacaggctgaagctgttgtgtcaaagcatcctttgcaagaatcttcgtgt 95447 Query: 1157 ggagaacgtggcaactacattggctttagctgatcagcataactgtgacaagcttaaaga 1216 | ||||| ||||||||| ||||| | |||||||| ||| | |||| || |||||| || Sbjct: 95446 tggtaacgttgcaactacactggctctggctgatcaacatcattgtggcatgcttaagga 95387 Query: 1217 tgtttgcattgaatttat 1234 || ||||||||||||||| Sbjct: 95386 tgcttgcattgaatttat 95369 Score = 65.9 bits (33), Expect = 4e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 1180 ctttagctgatcagcataactgtgacaagcttaaagatgtttgcattgaattt 1232 |||||||||||||| | |||| |||||||||||| ||||||||| |||||||| Sbjct: 111991 ctttagctgatcagtacaactatgacaagcttaaggatgtttgccttgaattt 111939 Score = 61.9 bits (31), Expect = 6e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 341 gcacatctttgagattgccgggtacagcctcaagaaggacatgggtgtagacaagttcgt 400 |||||| |||||||| ||||||||| || |||||| ||| ||||| | |||||| || Sbjct: 33603 gcacatatttgagatcaacgggtacagattccagaagggcatcggtgttggcaagtttgt 33544 Query: 401 ccggtcaaccatcttcactgtcggtgg 427 |||||| | |||||||||||||||||| Sbjct: 33543 ccggtcgaacatcttcactgtcggtgg 33517 Score = 56.0 bits (28), Expect = 4e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 1179 gctttagctgatcagcataactgtgacaagcttaaagatgtttgcattgaatttat 1234 ||||||||||||||||||| ||| |||| ||||| ||||||||| || ||||||| Sbjct: 70753 gctttagctgatcagcatagctgcaacaaccttaaggatgtttgcgttaaatttat 70808 Score = 52.0 bits (26), Expect = 0.006 Identities = 68/82 (82%) Strand = Plus / Minus Query: 861 gagacctttcaggcgcacaagattttccctgccatgcggtcacctgtcttcaaagcagaa 920 |||||||| | |||||||||| || | | || |||||||| |||||||||||||| || Sbjct: 95742 gagaccttcccggcgcacaagcttgtgctggcgatgcggtctcctgtcttcaaagcggag 95683 Query: 921 ctcttcgggccgatgaaggaga 942 || | ||||||||||| ||||| Sbjct: 95682 ctatgcgggccgatgagggaga 95661 Score = 50.1 bits (25), Expect = 0.025 Identities = 52/61 (85%) Strand = Plus / Minus Query: 984 gttttcaaggctctgttgcatttcatctatacagattcattgcctgactttgatgatctt 1043 ||||||||||| ||| | ||||||||||| || ||||||||| || | ||||||||||| Sbjct: 112598 gttttcaaggccctgctccatttcatctacactgattcattgtctatcattgatgatctt 112539 Query: 1044 g 1044 | Sbjct: 112538 g 112538 Score = 46.1 bits (23), Expect = 0.38 Identities = 38/43 (88%) Strand = Plus / Minus Query: 359 cgggtacagcctcaagaaggacatgggtgtagacaagttcgtc 401 |||||||||||||||||||| ||| || || ||| |||||||| Sbjct: 29169 cgggtacagcctcaagaagggcatcggcgtggacgagttcgtc 29127 Score = 46.1 bits (23), Expect = 0.38 Identities = 35/39 (89%) Strand = Plus / Plus Query: 1271 caaaggttatgcaaatctcaaaagatcttgcccgtctgt 1309 |||||| |||||||||||||||||| |||||| ||||| Sbjct: 53508 caaaggctatgcaaatctcaaaagaagttgcccttctgt 53546 Score = 46.1 bits (23), Expect = 0.38 Identities = 41/47 (87%) Strand = Plus / Minus Query: 969 gatatccagcccgccgttttcaaggctctgttgcatttcatctatac 1015 ||||| ||||||||||| |||| ||| ||| |||| ||||||||||| Sbjct: 91696 gatatgcagcccgccgtcttcagggccctgctgcaattcatctatac 91650 Score = 44.1 bits (22), Expect = 1.5 Identities = 43/50 (86%) Strand = Plus / Minus Query: 1185 gctgatcagcataactgtgacaagcttaaagatgtttgcattgaatttat 1234 |||||||||||| | || |||||||| || |||| |||||| |||||||| Sbjct: 91480 gctgatcagcatcaatgcgacaagctgaaggatgcttgcatcgaatttat 91431
>dbj|AP004751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0494D11 Length = 149198 Score = 137 bits (69), Expect = 1e-28 Identities = 171/205 (83%) Strand = Plus / Minus Query: 1065 atgatccggcatttgctggtagctgcagataagtatgccatggacaggctgaagcttatg 1124 |||||| ||| |||||| || ||||| |||| |||||||||||||||| ||||| | | Sbjct: 112920 atgatcaggcttttgcttgtggctgctgataggtatgccatggacaggatgaagttgcag 112861 Query: 1125 tgtcaaaacatccttggcaagagtcttgatgtggagaacgtggcaactacattggcttta 1184 || ||| |||||| ||| || |||||||||| ||| ||| |||||||||||||||||| Sbjct: 112860 tgcgaaagcatcctcggcgagcatcttgatgtgcagaccgtcgcaactacattggcttta 112801 Query: 1185 gctgatcagcataactgtgacaagcttaaagatgtttgcattgaatttattgcctcttca 1244 ||||||||||| ||||| || |||||||||||||||||||| ||||| ||| || | Sbjct: 112800 gctgatcagcacaactgcaacggccttaaagatgtttgcattgagtttatcgccactcaa 112741 Query: 1245 gataagatggatgatgtggtggcaa 1269 | |||||||||||||||||||||| Sbjct: 112740 aacaagatggatgatgtggtggcaa 112716 Score = 121 bits (61), Expect = 8e-24 Identities = 112/129 (86%) Strand = Plus / Plus Query: 1098 tatgccatggacaggctgaagcttatgtgtcaaaacatccttggcaagagtcttgatgtg 1157 ||||||||||| ||| ||||| | ||||| |||| ||||||||| ||| | |||||||| Sbjct: 137807 tatgccatggataggttgaagttgatgtgccaaagcatccttggaaagtatgttgatgtg 137866 Query: 1158 gagaacgtggcaactacattggctttagctgatcagcataactgtgacaagcttaaagat 1217 |||||||||| ||||| ||||||||||||| |||||||||||||| |||||||| ||| Sbjct: 137867 aagaacgtggcgactacgctggctttagctgaccagcataactgtgataagcttaaggat 137926 Query: 1218 gtttgcatt 1226 ||||||||| Sbjct: 137927 gtttgcatt 137935 Score = 117 bits (59), Expect = 1e-22 Identities = 104/119 (87%) Strand = Plus / Minus Query: 1065 atgatccggcatttgctggtagctgcagataagtatgccatggacaggctgaagcttatg 1124 |||||||||||||| || || ||||| |||| ||||||||||||||||| ||| | || Sbjct: 117316 atgatccggcatttacttgtggctgcggatagatatgccatggacaggctcaagttgatt 117257 Query: 1125 tgtcaaaacatccttggcaagagtcttgatgtggagaacgtggcaactacattggcttt 1183 || ||| |||||||||||||||||||| ||||||| || |||||||||||||||||||| Sbjct: 117256 tgccaacacatccttggcaagagtcttcatgtggacaatgtggcaactacattggcttt 117198 Score = 61.9 bits (31), Expect = 6e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 341 gcacatctttgagattgccgggtacagcctcaagaaggacatgggtgtagacaagttcgt 400 |||||| |||||||| ||||||||| || |||||| ||| ||||| | |||||| || Sbjct: 118075 gcacatatttgagatcaacgggtacagattccagaagggcatcggtgttggcaagtttgt 118016 Query: 401 ccggtcaaccatcttcactgtcggtgg 427 |||||| | |||||||||||||||||| Sbjct: 118015 ccggtcgaacatcttcactgtcggtgg 117989 Score = 46.1 bits (23), Expect = 0.38 Identities = 38/43 (88%) Strand = Plus / Minus Query: 359 cgggtacagcctcaagaaggacatgggtgtagacaagttcgtc 401 |||||||||||||||||||| ||| || || ||| |||||||| Sbjct: 113641 cgggtacagcctcaagaagggcatcggcgtggacgagttcgtc 113599 Score = 46.1 bits (23), Expect = 0.38 Identities = 35/39 (89%) Strand = Plus / Plus Query: 1271 caaaggttatgcaaatctcaaaagatcttgcccgtctgt 1309 |||||| |||||||||||||||||| |||||| ||||| Sbjct: 137980 caaaggctatgcaaatctcaaaagaagttgcccttctgt 138018
>ref|NM_001067822.1| Oryza sativa (japonica cultivar-group) Os08g0227200 (Os08g0227200) mRNA, complete cds Length = 1446 Score = 99.6 bits (50), Expect = 3e-17 Identities = 161/198 (81%) Strand = Plus / Plus Query: 1037 tgatcttgaaggcgatgataactgtgaaatgatccggcatttgctggtagctgcagataa 1096 ||||||||| || || |||||| | || ||||||||||| ||||| || || || || | Sbjct: 959 tgatcttgagggagacgataacagcgagatgatccggcacttgcttgtcgccgcggacag 1018 Query: 1097 gtatgccatggacaggctgaagcttatgtgtcaaaacatccttggcaagagtcttgatgt 1156 ||||| |||||||||||||||| ||||||||| ||||||| |||||| |||| ||| Sbjct: 1019 atatgctgtggacaggctgaagctgttgtgtcaaagcatcctttgcaagaatcttcgtgt 1078 Query: 1157 ggagaacgtggcaactacattggctttagctgatcagcataactgtgacaagcttaaaga 1216 | ||||| ||||||||| ||||| | |||||||| ||| | |||| || |||||| || Sbjct: 1079 tggtaacgttgcaactacactggctctggctgatcaacatcattgtggcatgcttaagga 1138 Query: 1217 tgtttgcattgaatttat 1234 || ||||||||||||||| Sbjct: 1139 tgcttgcattgaatttat 1156 Score = 52.0 bits (26), Expect = 0.006 Identities = 68/82 (82%) Strand = Plus / Plus Query: 861 gagacctttcaggcgcacaagattttccctgccatgcggtcacctgtcttcaaagcagaa 920 |||||||| | |||||||||| || | | || |||||||| |||||||||||||| || Sbjct: 783 gagaccttcccggcgcacaagcttgtgctggcgatgcggtctcctgtcttcaaagcggag 842 Query: 921 ctcttcgggccgatgaaggaga 942 || | ||||||||||| ||||| Sbjct: 843 ctatgcgggccgatgagggaga 864
>dbj|AK069781.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031F24, full insert sequence Length = 1416 Score = 99.6 bits (50), Expect = 3e-17 Identities = 161/198 (81%) Strand = Plus / Plus Query: 1037 tgatcttgaaggcgatgataactgtgaaatgatccggcatttgctggtagctgcagataa 1096 ||||||||| || || |||||| | || ||||||||||| ||||| || || || || | Sbjct: 960 tgatcttgagggagacgataacagcgagatgatccggcacttgcttgtcgccgcggacag 1019 Query: 1097 gtatgccatggacaggctgaagcttatgtgtcaaaacatccttggcaagagtcttgatgt 1156 ||||| |||||||||||||||| ||||||||| ||||||| |||||| |||| ||| Sbjct: 1020 atatgctgtggacaggctgaagctgttgtgtcaaagcatcctttgcaagaatcttcgtgt 1079 Query: 1157 ggagaacgtggcaactacattggctttagctgatcagcataactgtgacaagcttaaaga 1216 | ||||| ||||||||| ||||| | |||||||| ||| | |||| || |||||| || Sbjct: 1080 tggtaacgttgcaactacactggctctggctgatcaacatcattgtggcatgcttaagga 1139 Query: 1217 tgtttgcattgaatttat 1234 || ||||||||||||||| Sbjct: 1140 tgcttgcattgaatttat 1157 Score = 52.0 bits (26), Expect = 0.006 Identities = 68/82 (82%) Strand = Plus / Plus Query: 861 gagacctttcaggcgcacaagattttccctgccatgcggtcacctgtcttcaaagcagaa 920 |||||||| | |||||||||| || | | || |||||||| |||||||||||||| || Sbjct: 784 gagaccttcccggcgcacaagcttgtgctggcgatgcggtctcctgtcttcaaagcggag 843 Query: 921 ctcttcgggccgatgaaggaga 942 || | ||||||||||| ||||| Sbjct: 844 ctatgcgggccgatgagggaga 865
>dbj|AK060189.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-E01, full insert sequence Length = 1453 Score = 91.7 bits (46), Expect = 7e-15 Identities = 109/130 (83%) Strand = Plus / Plus Query: 1105 tggacaggctgaagcttatgtgtcaaaacatccttggcaagagtcttgatgtggagaacg 1164 |||||||||||||||| ||||||||| ||||||| |||||| |||| ||| | |||| Sbjct: 1027 tggacaggctgaagctgttgtgtcaaagcatcctttgcaagaatcttcgtgttggtaacg 1086 Query: 1165 tggcaactacattggctttagctgatcagcataactgtgacaagcttaaagatgtttgca 1224 | ||||||||| ||||| | |||||||| ||| | |||| || |||||| |||| ||||| Sbjct: 1087 ttgcaactacactggctctggctgatcaacatcattgtggcatgcttaaggatgcttgca 1146 Query: 1225 ttgaatttat 1234 |||||||||| Sbjct: 1147 ttgaatttat 1156 Score = 52.0 bits (26), Expect = 0.006 Identities = 68/82 (82%) Strand = Plus / Plus Query: 861 gagacctttcaggcgcacaagattttccctgccatgcggtcacctgtcttcaaagcagaa 920 |||||||| | |||||||||| || | | || |||||||| |||||||||||||| || Sbjct: 783 gagaccttcccggcgcacaagcttgtgctggcgatgcggtctcctgtcttcaaagcggag 842 Query: 921 ctcttcgggccgatgaaggaga 942 || | ||||||||||| ||||| Sbjct: 843 ctatgcgggccgatgagggaga 864
>dbj|AP005517.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0090H20 Length = 132628 Score = 65.9 bits (33), Expect = 4e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 1180 ctttagctgatcagcataactgtgacaagcttaaagatgtttgcattgaattt 1232 |||||||||||||| | |||| |||||||||||| ||||||||| |||||||| Sbjct: 2555 ctttagctgatcagtacaactatgacaagcttaaggatgtttgccttgaattt 2503 Score = 50.1 bits (25), Expect = 0.025 Identities = 52/61 (85%) Strand = Plus / Minus Query: 984 gttttcaaggctctgttgcatttcatctatacagattcattgcctgactttgatgatctt 1043 ||||||||||| ||| | ||||||||||| || ||||||||| || | ||||||||||| Sbjct: 3162 gttttcaaggccctgctccatttcatctacactgattcattgtctatcattgatgatctt 3103 Query: 1044 g 1044 | Sbjct: 3102 g 3102
>ref|NM_001067823.1| Oryza sativa (japonica cultivar-group) Os08g0227400 (Os08g0227400) mRNA, complete cds Length = 873 Score = 50.1 bits (25), Expect = 0.025 Identities = 52/61 (85%) Strand = Plus / Plus Query: 984 gttttcaaggctctgttgcatttcatctatacagattcattgcctgactttgatgatctt 1043 ||||||||||| ||| | ||||||||||| || ||||||||| || | ||||||||||| Sbjct: 505 gttttcaaggccctgctccatttcatctacactgattcattgtctatcattgatgatctt 564 Query: 1044 g 1044 | Sbjct: 565 g 565
>ref|NM_001067821.1| Oryza sativa (japonica cultivar-group) Os08g0227100 (Os08g0227100) mRNA, complete cds Length = 1502 Score = 46.1 bits (23), Expect = 0.38 Identities = 41/47 (87%) Strand = Plus / Plus Query: 969 gatatccagcccgccgttttcaaggctctgttgcatttcatctatac 1015 ||||| ||||||||||| |||| ||| ||| |||| ||||||||||| Sbjct: 854 gatatgcagcccgccgtcttcagggccctgctgcaattcatctatac 900 Score = 44.1 bits (22), Expect = 1.5 Identities = 43/50 (86%) Strand = Plus / Plus Query: 1185 gctgatcagcataactgtgacaagcttaaagatgtttgcattgaatttat 1234 |||||||||||| | || |||||||| || |||| |||||| |||||||| Sbjct: 1070 gctgatcagcatcaatgcgacaagctgaaggatgcttgcatcgaatttat 1119
>gb|AC105318.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1058_F05, complete sequence Length = 109126 Score = 46.1 bits (23), Expect = 0.38 Identities = 26/27 (96%) Strand = Plus / Minus Query: 160 ccgccgcctccgccaccgaccgccgcc 186 ||||||||||||| ||||||||||||| Sbjct: 43444 ccgccgcctccgcgaccgaccgccgcc 43418
>gb|AC119292.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0088F07, complete sequence Length = 139180 Score = 46.1 bits (23), Expect = 0.38 Identities = 26/27 (96%) Strand = Plus / Minus Query: 160 ccgccgcctccgccaccgaccgccgcc 186 ||||||||||||| ||||||||||||| Sbjct: 137621 ccgccgcctccgcgaccgaccgccgcc 137595
>gb|AC125782.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0095P22, complete sequence Length = 162766 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Plus Query: 162 gccgcctccgccaccgaccgccg 184 ||||||||||||||||||||||| Sbjct: 32869 gccgcctccgccaccgaccgccg 32891
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Plus Query: 165 gcctccgccaccgaccgccgccc 187 ||||||||||||||||||||||| Sbjct: 1103568 gcctccgccaccgaccgccgccc 1103590
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Plus Query: 162 gccgcctccgccaccgaccgccg 184 ||||||||||||||||||||||| Sbjct: 24231760 gccgcctccgccaccgaccgccg 24231782
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 162 gccgcctccgccaccgaccgccg 184 ||||||||||||||||||||||| Sbjct: 4896835 gccgcctccgccaccgaccgccg 4896813 Score = 46.1 bits (23), Expect = 0.38 Identities = 26/27 (96%) Strand = Plus / Minus Query: 160 ccgccgcctccgccaccgaccgccgcc 186 ||||||||||||| ||||||||||||| Sbjct: 21256838 ccgccgcctccgcgaccgaccgccgcc 21256812 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 atctccgccgcctccgccacc 176 ||||||||||||||||||||| Sbjct: 27538401 atctccgccgcctccgccacc 27538421
>dbj|AK103481.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130G24, full insert sequence Length = 1464 Score = 46.1 bits (23), Expect = 0.38 Identities = 41/47 (87%) Strand = Plus / Plus Query: 969 gatatccagcccgccgttttcaaggctctgttgcatttcatctatac 1015 ||||| ||||||||||| |||| ||| ||| |||| ||||||||||| Sbjct: 855 gatatgcagcccgccgtcttcagggccctgctgcaattcatctatac 901 Score = 44.1 bits (22), Expect = 1.5 Identities = 43/50 (86%) Strand = Plus / Plus Query: 1185 gctgatcagcataactgtgacaagcttaaagatgtttgcattgaatttat 1234 |||||||||||| | || |||||||| || |||| |||||| |||||||| Sbjct: 1071 gctgatcagcatcaatgcgacaagctgaaggatgcttgcatcgaatttat 1120
>dbj|AK071657.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100C18, full insert sequence Length = 1505 Score = 46.1 bits (23), Expect = 0.38 Identities = 41/47 (87%) Strand = Plus / Plus Query: 969 gatatccagcccgccgttttcaaggctctgttgcatttcatctatac 1015 ||||| ||||||||||| |||| ||| ||| |||| ||||||||||| Sbjct: 855 gatatgcagcccgccgtcttcagggccctgctgcaattcatctatac 901 Score = 44.1 bits (22), Expect = 1.5 Identities = 43/50 (86%) Strand = Plus / Plus Query: 1185 gctgatcagcataactgtgacaagcttaaagatgtttgcattgaatttat 1234 |||||||||||| | || |||||||| || |||| |||||| |||||||| Sbjct: 1071 gctgatcagcatcaatgcgacaagctgaaggatgcttgcatcgaatttat 1120
>emb|BX000495.1|CNS08CDL Oryza sativa chromosome 12, . BAC OSJNBb0119L20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 126974 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Plus Query: 165 gcctccgccaccgaccgccgccc 187 ||||||||||||||||||||||| Sbjct: 42551 gcctccgccaccgaccgccgccc 42573
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 162 gccgcctccgccaccgaccgccg 184 ||||||||||||||||||||||| Sbjct: 169243 gccgcctccgccaccgaccgccg 169221
>gb|CP000448.1| Syntrophomonas wolfei subsp. wolfei str. Goettingen, complete genome Length = 2936195 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 246 tgcaggatggagtcagcatcca 267 |||||||||||||||||||||| Sbjct: 2769887 tgcaggatggagtcagcatcca 2769908
>gb|AC026003.10| Homo sapiens chromosome 18, clone RP11-715P20, complete sequence Length = 178733 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 852 gttggaggtgagacctttcagg 873 |||||||||||||||||||||| Sbjct: 40215 gttggaggtgagacctttcagg 40194
>gb|AC073156.19| Homo sapiens 3 BAC RP11-223L18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 131142 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 681 aagtaccttcacaatgatcttc 702 |||||||||||||||||||||| Sbjct: 37694 aagtaccttcacaatgatcttc 37715
>ref|NM_001030748.1| Gallus gallus similar to cell death adaptor molecule (LOC417900), mRNA emb|AJ851667.1| Gallus gallus mRNA for hypothetical protein, clone 16c14 Length = 2951 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1002 catttcatctatacagattcattgcc 1027 ||||||||||||||||| |||||||| Sbjct: 1662 catttcatctatacagagtcattgcc 1687
>ref|XM_001230102.1| Chaetomium globosum CBS 148.51 predicted protein (CHGG_03587) mRNA, complete cds Length = 969 Score = 42.1 bits (21), Expect = 6.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 159 tccgccgcctccgccaccgaccgccgccc 187 ||||||| | ||||||||||||||||||| Sbjct: 492 tccgccgacgccgccaccgaccgccgccc 464
>ref|NM_001062827.1| Oryza sativa (japonica cultivar-group) Os05g0557800 (Os05g0557800) mRNA, complete cds Length = 1251 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 atctccgccgcctccgccacc 176 ||||||||||||||||||||| Sbjct: 403 atctccgccgcctccgccacc 383
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 42.1 bits (21), Expect = 6.0 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 160 ccgccgcctccgccaccgaccgccgccct 188 ||||||||||||||||| ||||||||||| Sbjct: 8041180 ccgccgcctccgccacc-accgccgccct 8041153
>gb|CP000362.1| Roseobacter denitrificans OCh 114, complete genome Length = 4133097 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 969 gatatccagcccgccgttttcaagg 993 |||||||||||||| |||||||||| Sbjct: 660659 gatatccagcccgcggttttcaagg 660683
>gb|DQ387961.1| Cebus capucinus forkhead box G1 (FoxG1) gene, complete cds Length = 1470 Score = 42.1 bits (21), Expect = 6.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 160 ccgccgcctccgccaccgaccgccgccct 188 |||||||| ||||| |||||||||||||| Sbjct: 319 ccgccgccgccgccgccgaccgccgccct 347
>gb|AC144735.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0001A14, complete sequence Length = 129292 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 atctccgccgcctccgccacc 176 ||||||||||||||||||||| Sbjct: 5677 atctccgccgcctccgccacc 5697
>gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1214_E03, complete sequence Length = 144601 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 atctccgccgcctccgccacc 176 ||||||||||||||||||||| Sbjct: 134531 atctccgccgcctccgccacc 134551
>gb|AC147343.2| Pan troglodytes BAC clone CH251-14P15 from Y, complete sequence Length = 277007 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 991 aggctctgttgcatttcatct 1011 ||||||||||||||||||||| Sbjct: 155735 aggctctgttgcatttcatct 155755
>gb|AC147117.2| Pan troglodytes BAC clone CH251-532B3 from Y, complete sequence Length = 207020 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 991 aggctctgttgcatttcatct 1011 ||||||||||||||||||||| Sbjct: 25004 aggctctgttgcatttcatct 24984
>emb|AL954220.1| Pan troglodytes chromosome 22 clone PTB-091C04 map q21.2, complete sequence Length = 241304 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 847 tcaatgttggaggtgagacct 867 ||||||||||||||||||||| Sbjct: 148061 tcaatgttggaggtgagacct 148081
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 160 ccgccgcctccgccaccgaccgccg 184 |||| |||||||||||||||||||| Sbjct: 12989433 ccgctgcctccgccaccgaccgccg 12989457
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 ccgccgcctccgccaccgacc 180 ||||||||||||||||||||| Sbjct: 21739465 ccgccgcctccgccaccgacc 21739485
>emb|AL357354.10| Human DNA sequence from clone RP11-465C5 on chromosome Xq21.2-22.1 Contains a phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase (PAICS) pseudogene, complete sequence Length = 194612 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1443 caaatagtgtaatatcatgtg 1463 ||||||||||||||||||||| Sbjct: 142291 caaatagtgtaatatcatgtg 142271
>dbj|AP001732.1| Homo sapiens genomic DNA, chromosome 21q, section 76/105 Length = 340000 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 847 tcaatgttggaggtgagacct 867 ||||||||||||||||||||| Sbjct: 204600 tcaatgttggaggtgagacct 204620
>dbj|BS000666.1| Pan troglodytes chromosome Y clone:PTBY-003G06, complete sequences Length = 102559 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 991 aggctctgttgcatttcatct 1011 ||||||||||||||||||||| Sbjct: 12151 aggctctgttgcatttcatct 12131
>emb|BX957274.8| Zebrafish DNA sequence from clone DKEY-155F10 in linkage group 9, complete sequence Length = 216817 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 981 gccgttttcaaggctctgttgcatt 1005 |||||||||| |||||||||||||| Sbjct: 164644 gccgttttcagggctctgttgcatt 164668
>gb|AC007724.4|AC007724 Drosophila melanogaster, chromosome 3R, region 87B-87B, BAC clone BACR30N15, complete sequence Length = 178199 Score = 42.1 bits (21), Expect = 6.0 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 160 ccgccgcctccgccaccgaccgccgccct 188 ||||||||||||||||| ||||||||||| Sbjct: 71835 ccgccgcctccgccacc-accgccgccct 71808
>emb|AL954221.1| Pan troglodytes chromosome 22 clone RP43-105F23 map q21.2, complete sequence Length = 169077 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 847 tcaatgttggaggtgagacct 867 ||||||||||||||||||||| Sbjct: 146639 tcaatgttggaggtgagacct 146659
>gb|AC001231.3| Homo sapiens chromosome 17, clone CTB-44J6, complete sequence Length = 134457 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 820 acagtgaggaggaagcagatg 840 ||||||||||||||||||||| Sbjct: 90180 acagtgaggaggaagcagatg 90200
>dbj|AP003141.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0002B05 Length = 141275 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 ccgccgcctccgccaccgacc 180 ||||||||||||||||||||| Sbjct: 91516 ccgccgcctccgccaccgacc 91536
>dbj|AP005247.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0077F02 Length = 172442 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 160 ccgccgcctccgccaccgaccgccg 184 |||| |||||||||||||||||||| Sbjct: 63730 ccgctgcctccgccaccgaccgccg 63754
>dbj|BS000578.1| Pan troglodytes chromosome Y clone:PTB-519P18, complete sequences Length = 175850 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 991 aggctctgttgcatttcatct 1011 ||||||||||||||||||||| Sbjct: 28882 aggctctgttgcatttcatct 28902
>gb|AC092855.39| Mus musculus strain C57BL/6J chromosome 3 clone rp23-49o17, complete sequence Length = 249205 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1133 catccttggcaagagtcttga 1153 ||||||||||||||||||||| Sbjct: 185569 catccttggcaagagtcttga 185589
>dbj|AK105327.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A05, full insert sequence Length = 692 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 atctccgccgcctccgccacc 176 ||||||||||||||||||||| Sbjct: 403 atctccgccgcctccgccacc 383
>dbj|AK068460.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153H24, full insert sequence Length = 1252 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 atctccgccgcctccgccacc 176 ||||||||||||||||||||| Sbjct: 404 atctccgccgcctccgccacc 384
>dbj|AP004932.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT10J03, TM0094a, complete sequence Length = 65557 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1514 gtgttgttgattgtgttcctt 1534 ||||||||||||||||||||| Sbjct: 46403 gtgttgttgattgtgttcctt 46423
>ref|XM_563830.1| Anopheles gambiae str. PEST ENSANGP00000026428 (ENSANGG00000023243), partial mRNA Length = 840 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 929 gccgatgaaggagaagaagat 949 ||||||||||||||||||||| Sbjct: 381 gccgatgaaggagaagaagat 401
>dbj|AP001038.2| Homo sapiens genomic DNA, chromosome 21, clone:P178O22, ERG-ETS2 region, complete sequence Length = 141885 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 847 tcaatgttggaggtgagacct 867 ||||||||||||||||||||| Sbjct: 79014 tcaatgttggaggtgagacct 79034
>gb|CP000030.1| Anaplasma marginale str. St. Maries, complete genome Length = 1197687 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1380 gttacatgcggttgttgaggt 1400 ||||||||||||||||||||| Sbjct: 784728 gttacatgcggttgttgaggt 784748 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 270,984,801 Number of extensions: 14555911 Number of successful extensions: 316988 Number of sequences better than 10.0: 54 Number of HSP's gapped: 316975 Number of HSP's successfully gapped: 100 Length of query: 1576 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1553 Effective length of database: 18,503,978,556 Effective search space: 28736678697468 Effective search space used: 28736678697468 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
