ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf145e19 |
|---|---|
| Clone Library Name | barley_pub |
>P70362:UFD1_MOUSE Ubiquitin fusion degradation protein 1 homolog - Mus musculus| (Mouse) Length = 307 Score = 236 bits (602), Expect = 2e-61 Identities = 114/220 (51%), Positives = 150/220 (68%), Gaps = 4/220 (1%) Frame = +1 Query: 190 FEQTYRCYPASFI----DKPQLESGDKIIMPPSALDRLASLHIEYPMLFEVRNTGAERTS 357 F YRC+ S + D+ +E G KIIMPPSALD+L+ L+I YPMLF++ N ++R + Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78 Query: 358 HCGVLEFIAEEGMIYMPYWMMQNLLLQEGDMVFIKNANLPKGTYVKLQPHTTDFLDISNP 537 HCGVLEF+A+EG+ Y+P+WMMQNLLL+EG +V +++ NL TY K QP + DFLDI+NP Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNP 138 Query: 538 KAILEKTLRNYSCLTTGDSIMVAYNNKKYYIDIVETKPSSAISIIETDCEVDFAPPLDYK 717 KA+LE LRN++C+TTGD I + YN K Y + ++ETKP A+SIIE D VDF PL YK Sbjct: 139 KAVLENALRNFACMTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYK 198 Query: 718 EPERPKPTAPPSADPAAEAQVEEEPKFSPFTGPGRRLDGK 837 EP+RP A + E F F+G G RLDGK Sbjct: 199 EPKRPVQHEESIEGEADHSGYAGEVGFRAFSGSGNRLDGK 238
>Q9VTF9:UFD1_DROME Ubiquitin fusion degradation protein 1 homolog - Drosophila| melanogaster (Fruit fly) Length = 316 Score = 220 bits (560), Expect = 1e-56 Identities = 113/248 (45%), Positives = 152/248 (61%), Gaps = 11/248 (4%) Frame = +1 Query: 139 FLSMNMYFEGYGYRGSTFEQTYRCYPASFI---DKPQLESGDKIIMPPSALDRLASLHIE 309 F NM F G F Y+C+ S + ++ +E G KIIMPPSALD L L++E Sbjct: 4 FSGFNMMFP----EGRNFHANYKCFSVSMLPGNERTDVEKGGKIIMPPSALDTLTRLNVE 59 Query: 310 YPMLFEVRNTGAERTSHCGVLEFIAEEGMIYMPYWMMQNLLLQEGDMVFIKNANLPKGTY 489 YPMLF++ N R+SH GVLEF+A+EG Y+P+WMM+NLLL EGD++ I++ +LP T+ Sbjct: 60 YPMLFKLTNVKKSRSSHAGVLEFVADEGKCYLPHWMMENLLLGEGDILNIESVSLPVATF 119 Query: 490 VKLQPHTTDFLDISNPKAILEKTLRNYSCLTTGDSIMVAYNNKKYYIDIVETKPSSAISI 669 K QPH+TDFLDI+NPKA+LE LRN++CLT GD I + YN K Y + ++ETKP +A+SI Sbjct: 120 SKFQPHSTDFLDITNPKAVLENALRNFACLTRGDVIAIKYNKKVYELCVLETKPGNAVSI 179 Query: 670 IETDCEVDFAPPLDYKEPERPKPTAPPSADPAAEAQVE--------EEPKFSPFTGPGRR 825 IE D V+F P+ YK+ + + A E E F G G R Sbjct: 180 IECDMNVEFEAPVGYKDHSETQASGSGQQGAAGTVGGEIAGATNAILEEVVETFKGSGVR 239 Query: 826 LDGKPAKD 849 LDGK K+ Sbjct: 240 LDGKKKKE 247
>Q92890:UFD1_HUMAN Ubiquitin fusion degradation protein 1 homolog - Homo sapiens| (Human) Length = 343 Score = 218 bits (555), Expect = 5e-56 Identities = 115/256 (44%), Positives = 150/256 (58%), Gaps = 40/256 (15%) Frame = +1 Query: 190 FEQTYRCYPASFI----DKPQLESGDKIIMPPSALDRLASLHIEYPMLFEVRNTGAERTS 357 F YRC+ S + D+ +E G KIIMPPSALD+L+ L+I YPMLF++ N ++R + Sbjct: 19 FSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMT 78 Query: 358 HCGVLEFIAEEGMIYMPYWM------------------------------------MQNL 429 HCGVLEF+A+EG+ Y+P+WM MQNL Sbjct: 79 HCGVLEFVADEGICYLPHWMMQNLLLEEDGLVQLETVNLQVATYSKSKFCYLPHWMMQNL 138 Query: 430 LLQEGDMVFIKNANLPKGTYVKLQPHTTDFLDISNPKAILEKTLRNYSCLTTGDSIMVAY 609 LL+EG +V +++ NL TY K QP + DFLDI+NPKA+LE LRN++CLTTGD I + Y Sbjct: 139 LLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINY 198 Query: 610 NNKKYYIDIVETKPSSAISIIETDCEVDFAPPLDYKEPERPKPTAPPSADPAAEAQVEEE 789 N K Y + ++ETKP A+SIIE D VDF PL YKEPER + A + E Sbjct: 199 NEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPERQVQHEESTEGEADHSGYAGE 258 Query: 790 PKFSPFTGPGRRLDGK 837 F F+G G RLDGK Sbjct: 259 LGFRAFSGSGNRLDGK 274
>O42915:UFD1_SCHPO Ubiquitin fusion degradation protein 1 - Schizosaccharomyces pombe| (Fission yeast) Length = 342 Score = 191 bits (484), Expect = 8e-48 Identities = 86/183 (46%), Positives = 130/183 (71%), Gaps = 6/183 (3%) Frame = +1 Query: 190 FEQTYRCYPASFI---DKPQLESGDKIIMPPSALDRLASLHIEYPMLFEVRNTGAERTSH 360 F+ YRCYP + I ++P + G K+I+PPSAL++L+ L++ YPMLF+ N AE+ +H Sbjct: 32 FDTRYRCYPVAMIPGEERPNVNYGGKVILPPSALEKLSRLNVSYPMLFDFENEAAEKKTH 91 Query: 361 CGVLEFIAEEGMIYMPYWMMQNLLLQEGDMVFIKNANLPKGTYVKLQPHTTDFLDISNPK 540 GVLEFIAEEG +Y+PYWMM L L+ GD+V + N ++ +G+YVKLQP + +FLDI++ + Sbjct: 92 GGVLEFIAEEGRVYLPYWMMTTLSLEPGDLVRVINTDIAQGSYVKLQPQSVNFLDITDHR 151 Query: 541 AILEKTLRNYSCLTTGDSIMVAYNNKKYYIDIVETKPSSA---ISIIETDCEVDFAPPLD 711 A+LE LRN+S LT D + YN++ Y I +++ +P + +S++ETD VDF PP+ Sbjct: 152 AVLENALRNFSTLTKSDIFEILYNDQVYQIKVIDVQPDDSRHVVSVVETDLVVDFDPPIG 211 Query: 712 YKE 720 Y+E Sbjct: 212 YEE 214
>P53044:UFD1_YEAST Ubiquitin fusion degradation protein 1 - Saccharomyces cerevisiae| (Baker's yeast) Length = 361 Score = 189 bits (480), Expect = 2e-47 Identities = 103/229 (44%), Positives = 143/229 (62%), Gaps = 7/229 (3%) Frame = +1 Query: 166 GYGYRGSTFEQTYRCYPASFID----KPQLESGDKIIMPPSALDRLASLHIEYPMLFEVR 333 G+ TFE+ +RCYP + ++ K G KI +PPSAL +L+ L+I YPMLF++ Sbjct: 13 GFVNMPQTFEEFFRCYPIAMMNDRIRKDDANFGGKIFLPPSALSKLSMLNIRYPMLFKLT 72 Query: 334 NTGAERTSHCGVLEFIAEEGMIYMPYWMMQNLLLQEGDMVFIKNANLPKGTYVKLQPHTT 513 R +H GVLEFIAEEG +Y+P WMM+ L +Q G ++ I + ++P G +VKL+P + Sbjct: 73 ANETGRVTHGGVLEFIAEEGRVYLPQWMMETLGIQPGSLLQISSTDVPLGQFVKLEPQSV 132 Query: 514 DFLDISNPKAILEKTLRNYSCLTTGDSIMVAYNNKKYYIDIVETKP---SSAISIIETDC 684 DFLDIS+PKA+LE LRN+S LT D I ++YN K + I I+E KP S +I +IETD Sbjct: 133 DFLDISDPKAVLENVLRNFSTLTVDDVIEISYNGKTFKIKILEVKPESSSKSICVIETDL 192 Query: 685 EVDFAPPLDYKEPERPKPTAPPSADPAAEAQVEEEPKFSPFTGPGRRLD 831 DFAPP+ Y EP+ A +AQ ++E K S G G+ LD Sbjct: 193 VTDFAPPVGYVEPDY----------KALKAQQDKEKKNS--FGKGQVLD 229
>Q19584:UFD1_CAEEL Ubiquitin fusion degradation protein 1 homolog - Caenorhabditis| elegans Length = 342 Score = 173 bits (438), Expect = 2e-42 Identities = 102/252 (40%), Positives = 139/252 (55%), Gaps = 20/252 (7%) Frame = +1 Query: 172 GYRGSTFEQTYRCYPASFIDKP------QLESGDKIIMPPSALDRLASLHIEYPMLFEVR 333 G R ++QT+ Y F+ ++ G KI++P SAL+ L +I PMLF++ Sbjct: 15 GGRVGNYDQTFVVYGPVFLPNATQSKISEINYGGKILLPSSALNLLMQYNIPMPMLFKLT 74 Query: 334 NTGAERTSHCGVLEFIAEEGMIYMPYWMMQNLLLQEGDMVFIKNANLPKGTYVKLQPHTT 513 N +R +HCGVLEF A EG +P WMMQ L L +GD + I++A LPK T+ KL+P + Sbjct: 75 NMAVQRVTHCGVLEFSAPEGQAILPLWMMQQLGLDDGDTIRIESATLPKATFAKLKPMSL 134 Query: 514 DFLDISNPKAILEKTLRNYSCLTTGDSIMVAYNNKKYYIDIVETKPSSAISIIETDCEVD 693 +FL+I+NPKA+LE LR Y+CLT D I +Y + +V+ KP++++ IIE D +D Sbjct: 135 EFLNITNPKAVLEVELRKYACLTKNDRIPTSYAGQTLEFLVVDLKPANSVCIIECDVNLD 194 Query: 694 FAPPLDYKEPER---PKPTAPPSADPAAEAQVEEEPK-----------FSPFTGPGRRLD 831 F PP Y E R P TA P A P A A + K S F G GRRLD Sbjct: 195 FDPPEGYVEQPRQVTPAVTAKPPA-PDASAFIGAGQKAGGSGGTGQNATSVFGGAGRRLD 253 Query: 832 GKPAKDLDASSS 867 GK S S Sbjct: 254 GKKKPSSSVSLS 265
>Q13875:MOBP_HUMAN Myelin-associated oligodendrocyte basic protein - Homo sapiens| (Human) Length = 183 Score = 36.2 bits (82), Expect = 0.33 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Frame = +1 Query: 697 APPLDYKEPERPKPTA-PPSADPAAEAQVEEEPKFSPFTGPGRRLDGKPAK 846 +PP ++P RP+P PP A + +++P+ SP GPG G P K Sbjct: 129 SPPRSERQP-RPRPEVRPPPAKQRPPQKSKQQPRSSPLRGPGASRGGSPVK 178
>P26185:TONB_SERMA Protein tonB - Serratia marcescens| Length = 247 Score = 34.3 bits (77), Expect = 1.2 Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 8/62 (12%) Frame = +1 Query: 700 PPLDYKEPERPKPTAPPSADPAAEAQVEEEPKF------SPFT--GPGRRLDGKPAKDLD 855 PP +PE KP P P E QV+ EPK SPF P + +D P K Sbjct: 90 PPKAIVKPEPVKPKPKPKPKPKVEKQVKPEPKKVEPREPSPFNNDSPAKPIDKAPVKQAP 149 Query: 856 AS 861 A+ Sbjct: 150 AA 151
>Q8IX07:FOG1_HUMAN Zinc finger protein ZFPM1 - Homo sapiens (Human)| Length = 1004 Score = 34.3 bits (77), Expect = 1.2 Identities = 16/60 (26%), Positives = 31/60 (51%) Frame = +1 Query: 721 PERPKPTAPPSADPAAEAQVEEEPKFSPFTGPGRRLDGKPAKDLDASSSSPAKRQANATN 900 P+ + PP+A + + + EEP+ +P GPG P++ S +PA+ +A ++ Sbjct: 445 PQNGGSSEPPAAPRSIKVEAVEEPEAAPILGPGEPGPQAPSRTPSPRSPAPARVKAELSS 504
>Q99109:REP1_USTMA Repellent protein 1 precursor [Contains: Rep1-1; Rep1-2; Rep1-3;| Rep1-4; Rep1-5; Rep1-6; Rep1-7; Rep1-8; Rep1-9; Rep1-10; Rep1-C] - Ustilago maydis (Smut fungus) Length = 652 Score = 33.5 bits (75), Expect = 2.1 Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 6/86 (6%) Frame = +1 Query: 643 TKPSSAISIIETDCEVDFAPPLDYKEPE-----RPKPTAPPSADPAAEAQVEEEPKFSPF 807 T P ++ DC+ APP +P+ P PT PP + ++ + EPK P Sbjct: 460 TPPKQTVTKPSADCD---APPAVTPKPKPSTKPSPSPTTPPPSKDTSKPTTKPEPKPQPS 516 Query: 808 TGPGRRLDGKP-AKDLDASSSSPAKR 882 P + KP K D P+ + Sbjct: 517 DKPEPKPSDKPEPKPSDKPEPKPSDK 542
>Q6GDH2:CLFB_STAAR Clumping factor B precursor - Staphylococcus aureus (strain| MRSA252) Length = 873 Score = 33.5 bits (75), Expect = 2.1 Identities = 19/65 (29%), Positives = 28/65 (43%) Frame = +1 Query: 700 PPLDYKEPERPKPTAPPSADPAAEAQVEEEPKFSPFTGPGRRLDGKPAKDLDASSSSPAK 879 PP+D + P P PS +P E + EP SP P D D D+ S S + Sbjct: 550 PPVDPEPEPEPTPDPEPSPEPEPEPTPDPEP--SPEPDPDSDSDSDSGSDSDSGSDSDSD 607 Query: 880 RQANA 894 +++ Sbjct: 608 SDSDS 612
>Q7W9A5:IF2_BORPA Translation initiation factor IF-2 - Bordetella parapertussis| Length = 969 Score = 33.1 bits (74), Expect = 2.8 Identities = 20/79 (25%), Positives = 36/79 (45%) Frame = +1 Query: 646 KPSSAISIIETDCEVDFAPPLDYKEPERPKPTAPPSADPAAEAQVEEEPKFSPFTGPGRR 825 +P+ +S+ ET+ E P+ + + E T P A P+A A+ + K P P + Sbjct: 178 EPAKNVSVTETEAEQARPEPVVHAQTELTSQTPAPVAQPSAPAESPKSAKAEPAAAP--K 235 Query: 826 LDGKPAKDLDASSSSPAKR 882 KP + A++ + R Sbjct: 236 TTAKPGEIRRAAAPAAPDR 254
>Q7WHG2:IF2_BORBR Translation initiation factor IF-2 - Bordetella bronchiseptica| (Alcaligenes bronchisepticus) Length = 997 Score = 33.1 bits (74), Expect = 2.8 Identities = 20/79 (25%), Positives = 36/79 (45%) Frame = +1 Query: 646 KPSSAISIIETDCEVDFAPPLDYKEPERPKPTAPPSADPAAEAQVEEEPKFSPFTGPGRR 825 +P+ +S+ ET+ E P+ + + E T P A P+A A+ + K P P + Sbjct: 206 EPAKNVSVTETEAEQARPEPVVHAQTELTSKTPAPVAQPSAPAESPKSAKAEPAAAP--K 263 Query: 826 LDGKPAKDLDASSSSPAKR 882 KP + A++ + R Sbjct: 264 TTAKPGEIRRAAAPAAPDR 282
>Q7VYR2:IF2_BORPE Translation initiation factor IF-2 - Bordetella pertussis| Length = 997 Score = 32.7 bits (73), Expect = 3.6 Identities = 20/79 (25%), Positives = 36/79 (45%) Frame = +1 Query: 646 KPSSAISIIETDCEVDFAPPLDYKEPERPKPTAPPSADPAAEAQVEEEPKFSPFTGPGRR 825 +P+ +S+ ET+ E P+ + + E T P A P+A A+ + K P P + Sbjct: 206 EPAKNVSVTETEAEQARPEPVVHAQTELTSQTPTPVAQPSAPAESPKSVKAEPAAAP--K 263 Query: 826 LDGKPAKDLDASSSSPAKR 882 KP + A++ + R Sbjct: 264 TTAKPGEIRRAAAPAAPDR 282
>Q90867:HNF1A_CHICK Hepatocyte nuclear factor 1-alpha - Gallus gallus (Chicken)| Length = 634 Score = 32.7 bits (73), Expect = 3.6 Identities = 15/47 (31%), Positives = 26/47 (55%) Frame = +1 Query: 730 PKPTAPPSADPAAEAQVEEEPKFSPFTGPGRRLDGKPAKDLDASSSS 870 P+PT+ P P + ++ P SP G R + +PA + ++SSS+ Sbjct: 292 PQPTSAPPLTPHNSSSLQPPPALSPTKVHGVRYNQQPASEAESSSSN 338
>Q9SJY7:AGP2_ARATH Classical arabinogalactan protein 2 precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 131 Score = 32.7 bits (73), Expect = 3.6 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 1/84 (1%) Frame = +1 Query: 643 TKPSSAISIIETDCEVDFA-PPLDYKEPERPKPTAPPSADPAAEAQVEEEPKFSPFTGPG 819 T P +A+ + + A PP+ EP P PT P+ P A + P +P G Sbjct: 32 TPPPTALPPVTAETPSPIASPPVPVNEP-TPAPTTSPTTSPVASPPQTDAP--APGPSAG 88 Query: 820 RRLDGKPAKDLDASSSSPAKRQAN 891 PA D ++ +P+ AN Sbjct: 89 LTPTSSPAPGPDGAADAPSAAWAN 112
>Q4WSI0:STU1_ASPFU Protein stu1 - Aspergillus fumigatus (Sartorya fumigata)| Length = 1344 Score = 32.3 bits (72), Expect = 4.7 Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 7/92 (7%) Frame = +1 Query: 649 PSSAISIIETD------CEVDFAPPLDYKEPERPKPTAPPSADP-AAEAQVEEEPKFSPF 807 PSS+ S + T + AP +P RP+ P +ADP AA V + Sbjct: 684 PSSSKSSVRTVPTGTSLSSLSSAPVRPAAKPRRPELNRPATADPYAARRSVATDSS---- 739 Query: 808 TGPGRRLDGKPAKDLDASSSSPAKRQANATNS 903 T G ++DG P+ + SS+P+ + ++T S Sbjct: 740 TRHGNQIDGSPSA-AKSKSSTPSLKSVSSTGS 770
>Q96T58:MINT_HUMAN Msx2-interacting protein - Homo sapiens (Human)| Length = 3664 Score = 32.3 bits (72), Expect = 4.7 Identities = 28/101 (27%), Positives = 40/101 (39%), Gaps = 11/101 (10%) Frame = +1 Query: 625 YIDIVETKPSSAISIIET--DCEVDFAPPL--------DYKEPERPKPTAPPSADPAAEA 774 Y+D P ++ S E+ D E D PL + EP+ KP A A+P A Sbjct: 1730 YLDAKPPTPGASFSQAESNVDPEPDSTQPLSKPAQKSEEANEPKAEKPDATADAEPDANQ 1789 Query: 775 QVEEEPKFSPFTGPGRRLDGK-PAKDLDASSSSPAKRQANA 894 + E P+ P +D AKD + S +K A Sbjct: 1790 KAEAAPESQPPASEDLEVDPPVAAKDKKPNKSKRSKTPVQA 1830
>P37319:ICP34_HHV1N Infected cell protein ICP34.5 - Human herpesvirus 1 (strain MGH-10)| (HHV-1) (Human herpes simplex virus 1) Length = 245 Score = 32.3 bits (72), Expect = 4.7 Identities = 14/43 (32%), Positives = 19/43 (44%) Frame = +1 Query: 712 YKEPERPKPTAPPSADPAAEAQVEEEPKFSPFTGPGRRLDGKP 840 ++ P RP+P P A P A++QV P P G P Sbjct: 8 HRGPRRPRPPGPTGAVPTAQSQVTSTPNSEPVVRSAPAAGGPP 50
>O86476:CLFB_STAAU Clumping factor B precursor - Staphylococcus aureus| Length = 913 Score = 32.3 bits (72), Expect = 4.7 Identities = 20/65 (30%), Positives = 29/65 (44%) Frame = +1 Query: 700 PPLDYKEPERPKPTAPPSADPAAEAQVEEEPKFSPFTGPGRRLDGKPAKDLDASSSSPAK 879 PP+D PE P P P P E + EP+ SP P D D D+ S S ++ Sbjct: 550 PPVD---PE-PSPDPEPEPTPDPEPSPDPEPEPSPDPDPDSDSDSDSGSDSDSGSDSDSE 605 Query: 880 RQANA 894 +++ Sbjct: 606 SDSDS 610
>Q7A382:CLFB_STAAN Clumping factor B precursor - Staphylococcus aureus (strain N315)| Length = 877 Score = 32.3 bits (72), Expect = 4.7 Identities = 20/65 (30%), Positives = 29/65 (44%) Frame = +1 Query: 700 PPLDYKEPERPKPTAPPSADPAAEAQVEEEPKFSPFTGPGRRLDGKPAKDLDASSSSPAK 879 PP+D PE P P P P E + EP+ SP P D D D+ S S ++ Sbjct: 550 PPVD---PE-PSPDPEPEPTPDPEPSPDPEPEPSPDPDPDSDSDSDSGSDSDSGSDSDSE 605 Query: 880 RQANA 894 +++ Sbjct: 606 SDSDS 610
>Q99R07:CLFB_STAAM Clumping factor B precursor - Staphylococcus aureus (strain Mu50 /| ATCC 700699) Length = 877 Score = 32.3 bits (72), Expect = 4.7 Identities = 20/65 (30%), Positives = 29/65 (44%) Frame = +1 Query: 700 PPLDYKEPERPKPTAPPSADPAAEAQVEEEPKFSPFTGPGRRLDGKPAKDLDASSSSPAK 879 PP+D PE P P P P E + EP+ SP P D D D+ S S ++ Sbjct: 550 PPVD---PE-PSPDPEPEPTPDPEPSPDPEPEPSPDPDPDSDSDSDSGSDSDSGSDSDSE 605 Query: 880 RQANA 894 +++ Sbjct: 606 SDSDS 610
>Q5HCR7:CLFB_STAAC Clumping factor B precursor - Staphylococcus aureus (strain COL)| Length = 913 Score = 32.3 bits (72), Expect = 4.7 Identities = 20/65 (30%), Positives = 29/65 (44%) Frame = +1 Query: 700 PPLDYKEPERPKPTAPPSADPAAEAQVEEEPKFSPFTGPGRRLDGKPAKDLDASSSSPAK 879 PP+D PE P P P P E + EP+ SP P D D D+ S S ++ Sbjct: 550 PPVD---PE-PSPDPEPEPTPDPEPSPDPEPEPSPDPDPDSDSDSDSGSDSDSGSDSDSE 605 Query: 880 RQANA 894 +++ Sbjct: 606 SDSDS 610
>Q2FUY2:CLFB_STAA8 Clumping factor B precursor - Staphylococcus aureus (strain NCTC| 8325) Length = 877 Score = 32.3 bits (72), Expect = 4.7 Identities = 20/65 (30%), Positives = 29/65 (44%) Frame = +1 Query: 700 PPLDYKEPERPKPTAPPSADPAAEAQVEEEPKFSPFTGPGRRLDGKPAKDLDASSSSPAK 879 PP+D PE P P P P E + EP+ SP P D D D+ S S ++ Sbjct: 550 PPVD---PE-PSPDPEPEPTPDPEPSPDPEPEPSPDPDPDSDSDSDSGSDSDSGSDSDSE 605 Query: 880 RQANA 894 +++ Sbjct: 606 SDSDS 610
>Q9BZE9:ASPC1_HUMAN Tether containing UBX domain for GLUT4 - Homo sapiens (Human)| Length = 553 Score = 32.3 bits (72), Expect = 4.7 Identities = 37/127 (29%), Positives = 52/127 (40%), Gaps = 11/127 (8%) Frame = +1 Query: 523 DISNPKAILEKTLRNYSCLTTGDSIMVAYNNKKYYIDIVETKPSSAISIIETDCEVDFAP 702 +++ A+ TL++ TG S + + K Y D V P S S AP Sbjct: 144 EVTGEAALRGTTLQSLGL--TGGSATIRFVMKCY--DPVGKTPGSLGSSASAGQAAASAP 199 Query: 703 -PLDYKEPERPKPTAPPSAD---PAAEAQVEEEPK-------FSPFTGPGRRLDGKPAKD 849 PL+ E R + P AD P E E++ F PF+G G+RL G P Sbjct: 200 LPLESGELSRGDLSRPEDADTSGPCCEHTQEKQSTRAPAAAPFVPFSGGGQRLGGPPGPT 259 Query: 850 LDASSSS 870 +SSS Sbjct: 260 RPLTSSS 266
>Q8IZ40:RCOR2_HUMAN REST corepressor 2 - Homo sapiens (Human)| Length = 523 Score = 32.0 bits (71), Expect = 6.1 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = +2 Query: 854 MRHPLRLQSDKLMQPTVFSHQQPPPHRAPRLVKPREN 964 +R P LQ + +QP + +Q PPP P L PR + Sbjct: 464 LRQPPPLQQGRFLQPRLAPNQPPPPLIRPALAAPRHS 500
>Q7YS82:MYOD1_BOVIN Myoblast determination protein 1 - Bos taurus (Bovine)| Length = 318 Score = 32.0 bits (71), Expect = 6.1 Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 8/112 (7%) Frame = +1 Query: 505 HTTDFLDISNPKAILEKTLRNYSCLTTGDSIMVAYNNKKYYIDIVETKPSSAISIIETDC 684 H + D S+P++ + +YS +G Y+ Y E +P + ++ DC Sbjct: 192 HYSGDSDASSPRSNCSDGMMDYSGPPSGARRRNCYDRTYYSEAPNEPRPGKSAAVSSLDC 251 Query: 685 EVDFAPPLDYKEPERPK---PTAPPSADP----AAEAQVEE-EPKFSPFTGP 816 + + P P APP + P AA ++VE P SP T P Sbjct: 252 LSSIVERISTESPAAPALLLADAPPESSPGPQEAAGSEVERGTPAPSPDTAP 303
>P08393:ICP0_HHV11 Trans-acting transcriptional protein ICP0 - Human herpesvirus 1| (strain 17) (HHV-1) (Human herpes simplex virus 1) Length = 775 Score = 32.0 bits (71), Expect = 6.1 Identities = 19/63 (30%), Positives = 31/63 (49%) Frame = +1 Query: 715 KEPERPKPTAPPSADPAAEAQVEEEPKFSPFTGPGRRLDGKPAKDLDASSSSPAKRQANA 894 +E P+ T PP A A+ P S GPG R G P L +S++S + A++ Sbjct: 510 QENPSPQSTRPPLAPAGAKRAATHPPSDS---GPGGRGQGGPGTPLTSSAASASSSSASS 566 Query: 895 TNS 903 +++ Sbjct: 567 SSA 569
>Q9DBX7:HEYL_MOUSE Hairy/enhancer-of-split related with YRPW motif-like protein - Mus| musculus (Mouse) Length = 326 Score = 32.0 bits (71), Expect = 6.1 Identities = 19/51 (37%), Positives = 23/51 (45%) Frame = +1 Query: 721 PERPKPTAPPSADPAAEAQVEEEPKFSPFTGPGRRLDGKPAKDLDASSSSP 873 PERP P + D A + P SP T PG GK ++ S SSP Sbjct: 251 PERPAAPPPTALDARAARSIVPIPPCSPTTAPGA---GKSDDNVSGSISSP 298
>Q4JIM5:ABL2_MOUSE Tyrosine-protein kinase ABL2 - Mus musculus (Mouse)| Length = 1182 Score = 32.0 bits (71), Expect = 6.1 Identities = 27/69 (39%), Positives = 33/69 (47%), Gaps = 4/69 (5%) Frame = +1 Query: 703 PLDYKEPERPKPTAPPSADPAAEAQV---EEEPKFSPFTG-PGRRLDGKPAKDLDASSSS 870 P +PE +PTAPP+ E Q + P P +G PGR + P L SS S Sbjct: 996 PSTCSDPEE-EPTAPPAGQHTPETQEGGKKAAPGPVPSSGKPGRPVMPPPQVPLPTSSIS 1054 Query: 871 PAKRQANAT 897 PAK AN T Sbjct: 1055 PAK-MANGT 1062
>Q9Y6F1:PARP3_HUMAN Poly [ADP-ribose] polymerase 3 - Homo sapiens (Human)| Length = 533 Score = 31.6 bits (70), Expect = 8.0 Identities = 12/30 (40%), Positives = 20/30 (66%) Frame = +2 Query: 896 PTVFSHQQPPPHRAPRLVKPRENLSLALAE 985 P F H QPPP +P L++ ++++ L LA+ Sbjct: 262 PHNFGHSQPPPINSPELLQAKKDMLLVLAD 291
>O18303:YHS4_CAEEL Uncharacterized protein ZK849.4 - Caenorhabditis elegans| Length = 602 Score = 31.6 bits (70), Expect = 8.0 Identities = 28/103 (27%), Positives = 42/103 (40%) Frame = +1 Query: 583 TGDSIMVAYNNKKYYIDIVETKPSSAISIIETDCEVDFAPPLDYKEPERPKPTAPPSADP 762 +G S A + +Y++I K + +I +PP P P P PP P Sbjct: 449 SGRSDTPAASPSVFYVNI-NVKVENPTPVIVDGARPPPSPPA--LPPALPNPNEPPPPPP 505 Query: 763 AAEAQVEEEPKFSPFTGPGRRLDGKPAKDLDASSSSPAKRQAN 891 AEA ++P+ S G + D PA+ A + SP N Sbjct: 506 PAEALRADQPRHSLIHEVGAQAD--PAEANGAQALSPVLPNPN 546
>P48435:SOX11_CHICK Transcription factor SOX-11 - Gallus gallus (Chicken)| Length = 396 Score = 31.6 bits (70), Expect = 8.0 Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Frame = +1 Query: 709 DYKEPERPKPTAPPSADPAAEAQVEEEPKFSPFTG-PGRRLDGKPAKDLDASSSSPAKRQ 885 DYK R KP PSA P A E K +P G + GK L A+++SP K Sbjct: 115 DYKYRPRKKPKMDPSAKPNAGQSPE---KNAPGGGSKSAKSSGKKCSKLKAAAASPPKPG 171 Query: 886 ANA 894 A A Sbjct: 172 AKA 174
>P55860:NEUM_XENLA Neuromodulin - Xenopus laevis (African clawed frog)| Length = 214 Score = 31.6 bits (70), Expect = 8.0 Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 1/87 (1%) Frame = +1 Query: 640 ETKPSSAISIIETDCEVDFAPPLDYK-EPERPKPTAPPSADPAAEAQVEEEPKFSPFTGP 816 +T+ +A +E E +P D K EP KP PS + A A+ E K S P Sbjct: 85 KTEEPTADGPLEVKKEAISSPAEDKKQEPSSEKPKDTPSEENQASAESESTTKGSTENSP 144 Query: 817 GRRLDGKPAKDLDASSSSPAKRQANAT 897 G +D AK+ + P Q A+ Sbjct: 145 G--VDASQAKEESKKADVPEATQDAAS 169
>P46321:LICR_BACSU Probable licABCH operon regulator [Includes: Putative| phosphotransferase enzyme IIB component - Bacillus subtilis Length = 641 Score = 31.6 bits (70), Expect = 8.0 Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 7/99 (7%) Frame = +1 Query: 373 EFIAEEGMIYMPY----WMMQNLLLQEGDMVFIKNANLPKGTYVKLQPHTTDFLDISN-- 534 EF ++G+ +P ++M+ LLL + ++K L + ++ TD ++ Sbjct: 79 EFQQKKGLPVLPEERMAYLMKRLLLADH---YLKLDELAEELFISKSTLQTDLKEVKKRL 135 Query: 535 -PKAILEKTLRNYSCLTTGDSIMVAYNNKKYYIDIVETK 648 P I+ +T NY GD + + Y +Y +D ET+ Sbjct: 136 LPYRIVMETRPNYGFKLRGDEVQMRYCMAEYIVDERETE 174
>P54256:HAP1_RAT Huntingtin-associated protein 1 - Rattus norvegicus (Rat)| Length = 629 Score = 31.6 bits (70), Expect = 8.0 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +1 Query: 718 EPERPKPTAPPSADPAAEAQVEEEPKFSPFTGPGRR 825 +P PT P+ADPA E E +P + TG G++ Sbjct: 19 DPATGTPTTQPAADPAPEPSAEPKPAPAQGTGSGQK 54
>P30729:DRD4_RAT D(4) dopamine receptor - Rattus norvegicus (Rat)| Length = 387 Score = 31.6 bits (70), Expect = 8.0 Identities = 17/56 (30%), Positives = 22/56 (39%) Frame = +1 Query: 706 LDYKEPERPKPTAPPSADPAAEAQVEEEPKFSPFTGPGRRLDGKPAKDLDASSSSP 873 L + P RP PP +DP + P SP + +P DL S SP Sbjct: 225 LHSRAPRRPSGPGPPVSDPTQGPLFSDCPPPSPSLRTSPTVSSRPESDLSQSPCSP 280
>Q6MG48:BAT2_RAT Large proline-rich protein BAT2 - Rattus norvegicus (Rat)| Length = 2161 Score = 31.6 bits (70), Expect = 8.0 Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 6/73 (8%) Frame = +1 Query: 703 PLDYKEPERPKPTA-PPSADPAAEAQV----EEEPKFSPFTGPGRRLDGKPAKDLDASSS 867 PL+ P P+P PP D AA+ Q +E PK P G KPA+ + Sbjct: 856 PLEESAPPGPRPLPWPPGNDEAAKMQAPPPKKEPPKEEPAQLSGPEAGRKPARGVGGGGQ 915 Query: 868 S-PAKRQANATNS 903 P R+ N T + Sbjct: 916 GPPPPRRENRTET 928
>Q61329:ATBF1_MOUSE Alpha-fetoprotein enhancer-binding protein - Mus musculus (Mouse)| Length = 3726 Score = 27.3 bits (59), Expect(2) = 9.3 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Frame = +1 Query: 604 AYNNKKYYIDIVETKPSSAISII-ETDCEVDFAPPLDYKEPERPKPTAPPSADPAAEAQV 780 AY+ T PS+ + + ETD F + + E+PK PPSA P + Sbjct: 2397 AYSTPAPSAAAANTAPSAFLQLTAETDELATFNSKAEASD-EKPKQADPPSAQPNQTQEK 2455 Query: 781 EEEPK 795 + +PK Sbjct: 2456 QGQPK 2460 Score = 22.3 bits (46), Expect(2) = 9.3 Identities = 10/19 (52%), Positives = 10/19 (52%) Frame = +2 Query: 884 KLMQPTVFSHQQPPPHRAP 940 KL QP S QPPP P Sbjct: 2480 KLPQPAAPSLPQPPPQAPP 2498 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 229,374,987 Number of extensions: 5011866 Number of successful extensions: 16754 Number of sequences better than 10.0: 39 Number of HSP's gapped: 16462 Number of HSP's successfully gapped: 41 Length of query: 453 Length of database: 100,686,439 Length adjustment: 117 Effective length of query: 336 Effective length of database: 68,593,924 Effective search space: 23047558464 Effective search space used: 23047558464 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
