ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf145e19 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY587885.1| Triticum aestivum ubiquitin fusion degradation protein (UFD1) mRNA, complete cds Length = 1135 Score = 1691 bits (853), Expect = 0.0 Identities = 993/1037 (95%), Gaps = 2/1037 (0%) Strand = Plus / Plus Query: 89 tcctcttcggccgaccggagaaccggtgcttaggttcaaaggggtt-aaccttcctgtcc 147 |||||||||||||| ||||||||||||||||||| ||||| ||||| ||||||| ||||| Sbjct: 71 tcctcttcggccgagcggagaaccggtgcttaggctcaaaagggtttaaccttcttgtcc 130 Query: 148 atgaatatgtattttgaaggctacggttaccgtggaagtacttttgagcagacctatcgc 207 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 131 atgaatatgtatttcgaaggctatggttaccgtggaagtacttttgagcagacctatcgc 190 Query: 208 tgctaccctgcatcttttattgacaagccacagcttgaatctggtgacaaaattatcatg 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 191 tgctaccctgcatcttttattgacaagccacagcttgaatctggtgacaaaattatcatg 250 Query: 268 ccaccttcggcacttgatcgtcttgcgtctctgcatattgagtatcctatgctatttgaa 327 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 251 ccaccttcggcacttgatcgtcttgcgtctctgcatattgagtaccctatgctatttgaa 310 Query: 328 gtccgcaacacaggagcagaacgtacttcacactgtggtgtcctagagttcattgcagaa 387 || |||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 311 gtacgcaacgcagcagcagaacgcacttcacactgtggtgtcctagagttcattgcagaa 370 Query: 388 gaaggcatgatctacatgccatactggatgatgcaaaatcttcttttgcaagaaggagat 447 ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| Sbjct: 371 gaaggcatgatctacatgccatactgggtgatgcaaaatcttcttttgcgagaaggagat 430 Query: 448 atggtgtttataaaaaatgccaacctcccaaagggcacatatgtgaagctgcagcctcat 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 431 atggtgtttataaaaaatgccaacctcccaaagggcacatatgtgaagctgcagcctcat 490 Query: 508 acaactgacttcttggacatttcaaatcccaaagcgatcttggaaaaaactttgcggaac 567 ||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||| Sbjct: 491 acaactgacttcttggacatttcaaatcccaaagcaatcttggaagagactttgcggaac 550 Query: 568 tactcttgtctaaccactggtgacagcattatggtggcatataataacaagaagtactac 627 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 551 tactcttgtctaaccactggtgacagcattatggtggcatataataacaaggggtactac 610 Query: 628 attgatatagttgaaacaaagccttccagtgctataagtataattgagactgattgtgag 687 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 611 attgatatagttgaaacaaagcctgccagtgctataagtataattgagactgattgtgag 670 Query: 688 gttgacttcgccccaccacttgactataaagaacctgagcggccaaaacctactgctcct 747 |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 671 gttgactttgccccaccacttgactataaagaacctgagcgaccaaaacctactgctcct 730 Query: 748 ccgagcgctgatcctgctgcagaggctcaagttgaggaggaacctaagttcagccccttc 807 || |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| Sbjct: 731 cccagcgctgatcctgctgcagaggctcaagatgaggaggaaccaaagttcagccccttc 790 Query: 808 actggtcctggtaggcgcctggatggcaagcctgctaaagatctggatgcgtcatcctct 867 ||||||||||| |||||| ||||||| ||||||||||||||| ||||||| ||||||||| Sbjct: 791 actggtcctggaaggcgcttggatgggaagcctgctaaagatttggatgcatcatcctct 850 Query: 868 tcgcctgcaaagcgacaagctaatgcaaccaacagtgttcagccatcagcagcctccacc 927 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 851 tcgcctgcaaagcgacaagctaatgcaaccaacagtgttcagccctcagcagcctccaca 910 Query: 928 tcacagagcaccgcgcctcgtaaaaccacgggaaaacttgtctttggctctggcggaagc 987 |||||| ||| ||||| ||||||||||| ||||| ||||||||||||||||| |||||| Sbjct: 911 ccacagatcacggcgccacgtaaaaccacaggaaagcttgtctttggctctggtggaagc 970 Query: 988 cagtcatcaaaaggaacagaaaaggtacccgaaaaggatgcaaaggaggacccgaagaaa 1047 |||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||| Sbjct: 971 cagtcatcaaaaggaacagaaaaggtgcccgacaaggatgcaaaggaggatccgaagaaa 1030 Query: 1048 gaggagccgaaattttcagcattcacgggaaagaagtactccttgaagggctgaatgtcc 1107 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1031 gaggagccgaagttttcagcattcacgggaaagaagtactccttgaagggctgaatg-cc 1089 Query: 1108 agagtatgtatttatca 1124 ||||||||||||||||| Sbjct: 1090 agagtatgtatttatca 1106 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 43 gccgaaaccgaggacgactcttctcc 68 |||||||||||||||||||||||||| Sbjct: 1 gccgaaaccgaggacgactcttctcc 26
>gb|BT016689.1| Zea mays clone Contig522 mRNA sequence Length = 1379 Score = 735 bits (371), Expect = 0.0 Identities = 695/803 (86%) Strand = Plus / Plus Query: 178 cgtggaagtacttttgagcagacctatcgctgctaccctgcatcttttattgacaagcca 237 |||||||||||||| |||||||| ||||||||||| ||||| ||||| || ||||||||| Sbjct: 175 cgtggaagtactttcgagcagacatatcgctgctatcctgcgtctttcatcgacaagcca 234 Query: 238 cagcttgaatctggtgacaaaattatcatgccaccttcggcacttgatcgtcttgcgtct 297 || ||||| | |||||||||||||| |||||||| || || |||||||||||||| ||| Sbjct: 235 caacttgaggccggtgacaaaattataatgccaccatcagctcttgatcgtcttgcatct 294 Query: 298 ctgcatattgagtatcctatgctatttgaagtccgcaacacaggagcagaacgtacttca 357 ||||||||||| || ||||||||||||||||||| ||| ||| ||||||||| ||||| Sbjct: 295 ctgcatattgaataccctatgctatttgaagtccacaatgcagcagcagaacggacttcg 354 Query: 358 cactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactggatg 417 || |||||||| || |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 355 cattgtggtgttctggagttcattgcagaagaaggcatgatctacatgccatattggatg 414 Query: 418 atgcaaaatcttcttttgcaagaaggagatatggtgtttataaaaaatgccaacctccca 477 ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 415 atgcaaaatcttcttttgcaagagggagatatggtgttcataaaaaatgccaacctcccc 474 Query: 478 aagggcacatatgtgaagctgcagcctcatacaactgacttcttggacatttcaaatccc 537 |||||||||||||||||| |||||||||||||||| ||||| | || |||||||| ||| Sbjct: 475 aagggcacatatgtgaagttgcagcctcatacaacagactttctagatatttcaaacccc 534 Query: 538 aaagcgatcttggaaaaaactttgcggaactactcttgtctaaccactggtgacagcatt 597 ||||| |||||||| |||||||||||||||| ||||||||||| || |||||||||||| Sbjct: 535 aaagcaatcttggagaaaactttgcggaacttttcttgtctaactacaggtgacagcatt 594 Query: 598 atggtggcatataataacaagaagtactacattgatatagttgaaacaaagccttccagt 657 ||||| ||||||||||||||||||||||||||||||||||| || ||||| || |||| | Sbjct: 595 atggttgcatataataacaagaagtactacattgatatagtggagacaaaaccctccaat 654 Query: 658 gctataagtataattgagactgattgtgaggttgacttcgccccaccacttgactataaa 717 ||||||||||| |||||||| ||||||||||||||||| || |||||||||||||| ||| Sbjct: 655 gctataagtattattgagaccgattgtgaggttgactttgctccaccacttgactacaaa 714 Query: 718 gaacctgagcggccaaaacctactgctcctccgagcgctgatcctgctgcagaggctcaa 777 |||||||||| ||||||| ||| |||| | ||| | || |||| | | || | || | Sbjct: 715 gaacctgagccagtaaaacctgctgttcctgcaagcacggagcctggtaccgacgttcca 774 Query: 778 gttgaggaggaacctaagttcagccccttcactggtcctggtaggcgcctggatggcaag 837 | ||| || ||||| ||||||| ||||||||||||| | || |||||| ||||||| ||| Sbjct: 775 gctgaagaagaaccaaagttcatccccttcactggttcaggaaggcgcttggatgggaag 834 Query: 838 cctgctaaagatctggatgcgtcatcctcttcgcctgcaaagcgacaagctaatgcaacc 897 ||| | |||||| |||| | | ||||||| ||||||||||||||||||||||| ||| Sbjct: 835 ccttccaaagataaagatgtgctagcctcttcccctgcaaagcgacaagctaatgcgacc 894 Query: 898 aacagtgttcagccatcagcagcctccacctcacagagcaccgcgcctcgtaaaaccacg 957 ||| |||| ||||| ||| ||||| |||| |||||| ||| | | ||||| |||| Sbjct: 895 aacggtgtgcagccttcaacagccaccacatcacagggcagttcatcgcgtaaggccaca 954 Query: 958 ggaaaacttgtctttggctctgg 980 ||||||||||||||||||||||| Sbjct: 955 ggaaaacttgtctttggctctgg 977 Score = 56.0 bits (28), Expect = 3e-04 Identities = 81/98 (82%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 1006 gaaaaggtacccgaaaaggatgcaaaggaggacccgaagaaagaggagccgaaattttca 1065 ||||||| ||| |||||||| ||| ||||| || |||||||| || || ||||| || Sbjct: 991 gaaaaggcacctgaaaaggaagcagaggag---cccaagaaagaagacccaaaattcgca 1047 Query: 1066 gcattcacgggaaagaagtactccttgaagggctgaat 1103 |||||||| |||||||| ||||| ||||||||||||| Sbjct: 1048 gcattcacaggaaagaaatactcactgaagggctgaat 1085
>ref|NM_001052630.1| Oryza sativa (japonica cultivar-group) Os02g0181800 (Os02g0181800) mRNA, complete cds Length = 1396 Score = 700 bits (353), Expect = 0.0 Identities = 536/597 (89%) Strand = Plus / Plus Query: 153 tatgtattttgaaggctacggttaccgtggaagtacttttgagcagacctatcgctgcta 212 ||||||||| |||||||| || |||||||||||||| || |||||||| ||||||||||| Sbjct: 211 tatgtatttcgaaggctatggctaccgtggaagtaccttcgagcagacatatcgctgcta 270 Query: 213 ccctgcatcttttattgacaagccacagcttgaatctggtgacaaaattatcatgccacc 272 |||||| ||||| ||||||||||| ||||||||| |||||||||||||||| |||||||| Sbjct: 271 ccctgcgtctttcattgacaagcctcagcttgaaactggtgacaaaattattatgccacc 330 Query: 273 ttcggcacttgatcgtcttgcgtctctgcatattgagtatcctatgctatttgaagtccg 332 ||| || || |||||||| || |||||||||||||| |||||||||||||||||||||| Sbjct: 331 ttctgctctggatcgtctagcatctctgcatattgaatatcctatgctatttgaagtcca 390 Query: 333 caacacaggagcagaacgtacttcacactgtggtgtcctagagttcattgcagaagaagg 392 |||| | | ||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 391 caacgcggcagcagaacggacttcacactgtggtgtcctggagttcattgcagaagaagg 450 Query: 393 catgatctacatgccatactggatgatgcaaaatcttcttttgcaagaaggagatatggt 452 |||||||||||||||||| ||||||||||||||||||||| | ||| || |||||||| Sbjct: 451 catgatctacatgccatattggatgatgcaaaatcttcttctaacagagggggatatggt 510 Query: 453 gtttataaaaaatgccaacctcccaaagggcacatatgtgaagctgcagcctcatacaac 512 ||| |||||||||||||| ||||| || || ||||||||||||||||||||||| ||||| Sbjct: 511 gttcataaaaaatgccaatctccctaaaggaacatatgtgaagctgcagcctcacacaac 570 Query: 513 tgacttcttggacatttcaaatcccaaagcgatcttggaaaaaactttgcggaactactc 572 |||||||| ||||||||||| || ||||| |||||||| ||||| |||||||| ||||| Sbjct: 571 agacttcttagacatttcaaacccaaaagcaatcttggagaaaacattgcggaattactc 630 Query: 573 ttgtctaaccactggtgacagcattatggtggcatataataacaagaagtactacattga 632 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 631 ttgtctaaccactggtgacagcattatggtagcatataataacaagaaatactacattga 690 Query: 633 tatagttgaaacaaagccttccagtgctataagtataattgagactgattgtgaggttga 692 |||||| |||||||||||||||| |||||| ||||| |||||||| || ||||| || || Sbjct: 691 tatagtggaaacaaagccttccaatgctatcagtattattgagaccgactgtgaagtcga 750 Query: 693 cttcgccccaccacttgactataaagaacctgagcggccaaaacctactgctcctcc 749 ||| || ||||||||||||||||||||||||||||| | |||| || ||| |||||| Sbjct: 751 ctttgctccaccacttgactataaagaacctgagcgacaaaaagctgctgttcctcc 807 Score = 149 bits (75), Expect = 3e-32 Identities = 255/315 (80%) Strand = Plus / Plus Query: 787 gaacctaagttcagccccttcactggtcctggtaggcgcctggatggcaagcctgctaaa 846 ||||| ||||||| |||||| ||||| ||||| ||||| |||||||| ||| || ||||| Sbjct: 845 gaaccaaagttcatcccctttactggacctgggaggcgtctggatgggaaggctcctaaa 904 Query: 847 gatctggatgcgtcatcctcttcgcctgcaaagcgacaagctaatgcaaccaacagtgtt 906 ||| ||||| ||| | || || |||||||| || |||||||||||||| ||||| || Sbjct: 905 gataaggatgtatcagcttcatcccctgcaaaacggcaagctaatgcaacaaacagcgtg 964 Query: 907 cagccatcagcagcctccacctcacagagcaccgcgcctcgtaaaaccacgggaaaactt 966 ||||| ||| |||| ||||| |||||||||| | ||||||||||||||| ||| ||| Sbjct: 965 cagccctcaacagcgtccacatcacagagcagttcatctcgtaaaaccacggaaaagctt 1024 Query: 967 gtctttggctctggcggaagccagtcatcaaaaggaacagaaaaggtacccgaaaaggat 1026 || |||||| |||| || | || |||| || | |||||||||||| || |||||||| Sbjct: 1025 gtttttggccctggtgggaaccgcacatctaaggaaacagaaaaggtgcctgaaaaggaa 1084 Query: 1027 gcaaaggaggacccgaagaaagaggagccgaaattttcagcattcacgggaaagaagtac 1086 | |||||||| || |||||||| || |||||||| ||||| || || |||| ||| ||| Sbjct: 1085 ccgaaggaggatcccaagaaagatgaaccgaaattctcagcttttacaggaaggaaatac 1144 Query: 1087 tccttgaagggctga 1101 || |||||||||||| Sbjct: 1145 tcattgaagggctga 1159
>dbj|AK121784.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094A11, full insert sequence Length = 1398 Score = 700 bits (353), Expect = 0.0 Identities = 536/597 (89%) Strand = Plus / Plus Query: 153 tatgtattttgaaggctacggttaccgtggaagtacttttgagcagacctatcgctgcta 212 ||||||||| |||||||| || |||||||||||||| || |||||||| ||||||||||| Sbjct: 213 tatgtatttcgaaggctatggctaccgtggaagtaccttcgagcagacatatcgctgcta 272 Query: 213 ccctgcatcttttattgacaagccacagcttgaatctggtgacaaaattatcatgccacc 272 | |||| ||||| ||||||||||| ||||||||| |||||||||||||||| |||||||| Sbjct: 273 cactgcgtctttcattgacaagcctcagcttgaaactggtgacaaaattattatgccacc 332 Query: 273 ttcggcacttgatcgtcttgcgtctctgcatattgagtatcctatgctatttgaagtccg 332 ||| || || |||||||| || |||||||||||||| |||||||||||||||||||||| Sbjct: 333 ttctgctctggatcgtctagcatctctgcatattgaatatcctatgctatttgaagtcca 392 Query: 333 caacacaggagcagaacgtacttcacactgtggtgtcctagagttcattgcagaagaagg 392 |||| | | ||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 393 caacgcggcagcagaacggacttcacactgtggtgtcctggagttcattgcagaagaagg 452 Query: 393 catgatctacatgccatactggatgatgcaaaatcttcttttgcaagaaggagatatggt 452 |||||||||||||||||| ||||||||||||||||||||| | ||| || |||||||| Sbjct: 453 catgatctacatgccatattggatgatgcaaaatcttcttctaacagagggggatatggt 512 Query: 453 gtttataaaaaatgccaacctcccaaagggcacatatgtgaagctgcagcctcatacaac 512 ||| |||||||||||||| ||||| || || ||||||||||||||||||||||| ||||| Sbjct: 513 gttcataaaaaatgccaatctccctaaaggaacatatgtgaagctgcagcctcacacaac 572 Query: 513 tgacttcttggacatttcaaatcccaaagcgatcttggaaaaaactttgcggaactactc 572 |||||||| ||||||||||| || ||||| |||||||| ||||| |||||||| ||||| Sbjct: 573 agacttcttagacatttcaaacccaaaagcaatcttggagaaaacattgcggaattactc 632 Query: 573 ttgtctaaccactggtgacagcattatggtggcatataataacaagaagtactacattga 632 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 633 ttgtctaaccactggtgacagcattatggtagcatataataacaagaaatactacattga 692 Query: 633 tatagttgaaacaaagccttccagtgctataagtataattgagactgattgtgaggttga 692 |||||| |||||||||||||||| |||||| ||||| |||||||| || ||||| || || Sbjct: 693 tatagtggaaacaaagccttccaatgctatcagtattattgagaccgactgtgaagtcga 752 Query: 693 cttcgccccaccacttgactataaagaacctgagcggccaaaacctactgctcctcc 749 ||| || ||||||||||||||||||||||||||||| | |||| || |||||||||| Sbjct: 753 ctttgctccaccacttgactataaagaacctgagcgacaaaaagctgctgctcctcc 809 Score = 149 bits (75), Expect = 3e-32 Identities = 255/315 (80%) Strand = Plus / Plus Query: 787 gaacctaagttcagccccttcactggtcctggtaggcgcctggatggcaagcctgctaaa 846 ||||| ||||||| |||||| ||||| ||||| ||||| |||||||| ||| || ||||| Sbjct: 847 gaaccaaagttcatcccctttactggacctgggaggcgtctggatgggaaggctcctaaa 906 Query: 847 gatctggatgcgtcatcctcttcgcctgcaaagcgacaagctaatgcaaccaacagtgtt 906 ||| ||||| ||| | || || |||||||| || |||||||||||||| ||||| || Sbjct: 907 gataaggatgtatcagcttcatcccctgcaaaacggcaagctaatgcaacaaacagcgtg 966 Query: 907 cagccatcagcagcctccacctcacagagcaccgcgcctcgtaaaaccacgggaaaactt 966 ||||| ||| |||| ||||| |||||||||| | ||||||||||||||| ||| ||| Sbjct: 967 cagccctcaacagcgtccacatcacagagcagttcatctcgtaaaaccacggaaaagctt 1026 Query: 967 gtctttggctctggcggaagccagtcatcaaaaggaacagaaaaggtacccgaaaaggat 1026 || |||||| |||| || | || |||| || | |||||||||||| || |||||||| Sbjct: 1027 gtttttggccctggtgggaaccgcacatctaaggaaacagaaaaggtgcctgaaaaggaa 1086 Query: 1027 gcaaaggaggacccgaagaaagaggagccgaaattttcagcattcacgggaaagaagtac 1086 | |||||||| || |||||||| || |||||||| ||||| || || |||| ||| ||| Sbjct: 1087 ccgaaggaggatcccaagaaagatgaaccgaaattctcagcttttacaggaaggaaatac 1146 Query: 1087 tccttgaagggctga 1101 || |||||||||||| Sbjct: 1147 tcattgaagggctga 1161
>gb|AY112612.1| Zea mays CL14668_1 mRNA sequence Length = 1298 Score = 698 bits (352), Expect = 0.0 Identities = 710/828 (85%), Gaps = 1/828 (0%) Strand = Plus / Plus Query: 154 atgtattttgaaggctacggttaccgtggaagtacttttgagcagacctatcgctgctac 213 ||||| || |||||||| || | ||||||||||||||| |||||||| ||||||||||| Sbjct: 118 atgtacttcgaaggctatggcttccgtggaagtactttcgagcagacatatcgctgctat 177 Query: 214 cctgcatcttttattgacaagccacagcttgaatctggtgacaaaattatcatgccacct 273 ||||| ||||| || ||||||||||| ||||| | |||||||||||||| |||||||| Sbjct: 178 cctgcgtctttcatcgacaagccacaacttgaggccggtgacaaaattataatgccacca 237 Query: 274 tcggcacttgatcgtcttgcgtctctgcatattgagtatcctatgctatttgaagtccgc 333 || || |||||||||||||| |||||||||||||| || ||||||||||||||||||| | Sbjct: 238 tcagctcttgatcgtcttgcatctctgcatattgaataccctatgctatttgaagtccac 297 Query: 334 aacacaggagcagaacgtacttcacactgtggtgtcctagagttcattgcagaagaaggc 393 || ||| ||||||||| ||||| || |||||||| || ||||||||||||||||||||| Sbjct: 298 aatgcagcagcagaacggacttcgcattgtggtgttctggagttcattgcagaagaaggc 357 Query: 394 atgatctacatgccatactggatgatgcaaaatcttcttttgcaagaaggagatatggtg 453 ||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||| | Sbjct: 358 atgatctacatgccatattggatgatgcaaaatcttctgttgcaagagggagatatggcg 417 Query: 454 tttataa-aaaatgccaacctcccaaagggcacatatgtgaagctgcagcctcatacaac 512 | | | |||||||||||||||| |||||||||||||||||| |||||||||||||||| Sbjct: 418 ctcacgagaaaatgccaacctccccaagggcacatatgtgaagttgcagcctcatacaac 477 Query: 513 tgacttcttggacatttcaaatcccaaagcgatcttggaaaaaactttgcggaactactc 572 ||||| | || |||||||| |||||||| |||||||| |||||||||||||||| || Sbjct: 478 agactttctagatatttcaaaccccaaagcaatcttggagaaaactttgcggaacttttc 537 Query: 573 ttgtctaaccactggtgacagcattatggtggcatataataacaagaagtactacattga 632 ||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 538 ttgtctaactacaggtgacagcattatggttgcatataataacaagaagtactacattga 597 Query: 633 tatagttgaaacaaagccttccagtgctataagtataattgagactgattgtgaggttga 692 |||||| || |||||||| |||| |||||||||||| |||||||| |||||||||||||| Sbjct: 598 tatagtagagacaaagccctccaatgctataagtattattgagaccgattgtgaggttga 657 Query: 693 cttcgccccaccacttgactataaagaacctgagcggccaaaacctactgctcctccgag 752 ||| || |||||||||||||| ||||||||||||| ||||||| ||| |||| | || Sbjct: 658 ctttgctccaccacttgactacaaagaacctgagccagtaaaacctgctgttcctgcaag 717 Query: 753 cgctgatcctgctgcagaggctcaagttgaggaggaacctaagttcagccccttcactgg 812 | | || |||| | | || | || || ||| || ||||| ||||||| |||||||||||| Sbjct: 718 cacggagcctggtaccgacgttccagctgaagaagaaccaaagttcatccccttcactgg 777 Query: 813 tcctggtaggcgcctggatggcaagcctgctaaagatctggatgcgtcatcctcttcgcc 872 | | || |||||| ||||||| |||||| | |||||| |||| | | ||||||| || Sbjct: 778 ttcaggaaggcgcttggatgggaagccttccaaagataaagatgtgctagcctcttcccc 837 Query: 873 tgcaaagcgacaagctaatgcaaccaacagtgttcagccatcagcagcctccacctcaca 932 ||||||||||||||||||||| |||||| |||| ||||| ||| ||||| |||| ||||| Sbjct: 838 tgcaaagcgacaagctaatgcgaccaacggtgtgcagccttcaacagccaccacatcaca 897 Query: 933 gagcaccgcgcctcgtaaaaccacgggaaaacttgtctttggctctgg 980 | ||| | | ||||| |||| ||||||||||||||||||||||| Sbjct: 898 gggcagttcatcgcgtaaggccacaggaaaacttgtctttggctctgg 945 Score = 48.1 bits (24), Expect = 0.084 Identities = 36/40 (90%) Strand = Plus / Plus Query: 1064 cagcattcacgggaaagaagtactccttgaagggctgaat 1103 |||||||||| |||||||| ||||| ||||||||||||| Sbjct: 1014 cagcattcacaggaaagaaatactcactgaagggctgaat 1053
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 246 bits (124), Expect = 2e-61 Identities = 184/204 (90%) Strand = Plus / Plus Query: 546 cttggaaaaaactttgcggaactactcttgtctaaccactggtgacagcattatggtggc 605 |||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 4565509 cttggagaaaacattgcggaattactcttgtctaaccactggtgacagcattatggtagc 4565568 Query: 606 atataataacaagaagtactacattgatatagttgaaacaaagccttccagtgctataag 665 ||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||| || Sbjct: 4565569 atataataacaagaaatactacattgatatagtggaaacaaagccttccaatgctatcag 4565628 Query: 666 tataattgagactgattgtgaggttgacttcgccccaccacttgactataaagaacctga 725 ||| |||||||| || ||||| || ||||| || |||||||||||||||||||||||||| Sbjct: 4565629 tattattgagaccgactgtgaagtcgactttgctccaccacttgactataaagaacctga 4565688 Query: 726 gcggccaaaacctactgctcctcc 749 ||| | |||| || ||| |||||| Sbjct: 4565689 gcgacaaaaagctgctgttcctcc 4565712 Score = 174 bits (88), Expect = 5e-40 Identities = 109/116 (93%) Strand = Plus / Plus Query: 295 tctctgcatattgagtatcctatgctatttgaagtccgcaacacaggagcagaacgtact 354 |||||||||||||| |||||||||||||||||||||| |||| | | ||||||||| ||| Sbjct: 4565036 tctctgcatattgaatatcctatgctatttgaagtccacaacgcggcagcagaacggact 4565095 Query: 355 tcacactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccata 410 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4565096 tcacactgtggtgtcctggagttcattgcagaagaaggcatgatctacatgccata 4565151 Score = 129 bits (65), Expect = 3e-26 Identities = 113/129 (87%) Strand = Plus / Plus Query: 414 gatgatgcaaaatcttcttttgcaagaaggagatatggtgtttataaaaaatgccaacct 473 ||||||||||||||||||| | ||| || ||||||||||| |||||||||||||| || Sbjct: 4565229 gatgatgcaaaatcttcttctaacagagggggatatggtgttcataaaaaatgccaatct 4565288 Query: 474 cccaaagggcacatatgtgaagctgcagcctcatacaactgacttcttggacatttcaaa 533 ||| || || ||||||||||||||||||||||| ||||| |||||||| ||||||||||| Sbjct: 4565289 ccctaaaggaacatatgtgaagctgcagcctcacacaacagacttcttagacatttcaaa 4565348 Query: 534 tcccaaagc 542 || ||||| Sbjct: 4565349 cccaaaagc 4565357 Score = 107 bits (54), Expect = 1e-19 Identities = 159/194 (81%) Strand = Plus / Plus Query: 787 gaacctaagttcagccccttcactggtcctggtaggcgcctggatggcaagcctgctaaa 846 ||||| ||||||| |||||| ||||| ||||| ||||| |||||||| ||| || ||||| Sbjct: 4565841 gaaccaaagttcatcccctttactggacctgggaggcgtctggatgggaaggctcctaaa 4565900 Query: 847 gatctggatgcgtcatcctcttcgcctgcaaagcgacaagctaatgcaaccaacagtgtt 906 ||| ||||| ||| | || || |||||||| || |||||||||||||| ||||| || Sbjct: 4565901 gataaggatgtatcagcttcatcccctgcaaaacggcaagctaatgcaacaaacagcgtg 4565960 Query: 907 cagccatcagcagcctccacctcacagagcaccgcgcctcgtaaaaccacgggaaaactt 966 ||||| ||| |||| ||||| |||||||||| | ||||||||||||||| ||| ||| Sbjct: 4565961 cagccctcaacagcgtccacatcacagagcagttcatctcgtaaaaccacggaaaagctt 4566020 Query: 967 gtctttggctctgg 980 || |||||| |||| Sbjct: 4566021 gtttttggccctgg 4566034 Score = 93.7 bits (47), Expect = 2e-15 Identities = 71/79 (89%) Strand = Plus / Plus Query: 156 gtattttgaaggctacggttaccgtggaagtacttttgagcagacctatcgctgctaccc 215 |||||| |||||||| || |||||||||||||| || |||||||| |||||||||||||| Sbjct: 4564165 gtatttcgaaggctatggctaccgtggaagtaccttcgagcagacatatcgctgctaccc 4564224 Query: 216 tgcatcttttattgacaag 234 ||| ||||| ||||||||| Sbjct: 4564225 tgcgtctttcattgacaag 4564243 Score = 56.0 bits (28), Expect = 3e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 1030 aaggaggacccgaagaaagaggagccgaaattttcagcattcacgggaaagaagtactcc 1089 |||||||| || |||||||| || |||||||| ||||| || || |||| ||| ||||| Sbjct: 4566286 aaggaggatcccaagaaagatgaaccgaaattctcagcttttacaggaaggaaatactca 4566345 Query: 1090 ttgaagggctga 1101 |||||||||||| Sbjct: 4566346 ttgaagggctga 4566357
>dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1297_C09 Length = 163378 Score = 246 bits (124), Expect = 2e-61 Identities = 184/204 (90%) Strand = Plus / Plus Query: 546 cttggaaaaaactttgcggaactactcttgtctaaccactggtgacagcattatggtggc 605 |||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 100888 cttggagaaaacattgcggaattactcttgtctaaccactggtgacagcattatggtagc 100947 Query: 606 atataataacaagaagtactacattgatatagttgaaacaaagccttccagtgctataag 665 ||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||| || Sbjct: 100948 atataataacaagaaatactacattgatatagtggaaacaaagccttccaatgctatcag 101007 Query: 666 tataattgagactgattgtgaggttgacttcgccccaccacttgactataaagaacctga 725 ||| |||||||| || ||||| || ||||| || |||||||||||||||||||||||||| Sbjct: 101008 tattattgagaccgactgtgaagtcgactttgctccaccacttgactataaagaacctga 101067 Query: 726 gcggccaaaacctactgctcctcc 749 ||| | |||| || ||| |||||| Sbjct: 101068 gcgacaaaaagctgctgttcctcc 101091 Score = 174 bits (88), Expect = 5e-40 Identities = 109/116 (93%) Strand = Plus / Plus Query: 295 tctctgcatattgagtatcctatgctatttgaagtccgcaacacaggagcagaacgtact 354 |||||||||||||| |||||||||||||||||||||| |||| | | ||||||||| ||| Sbjct: 100415 tctctgcatattgaatatcctatgctatttgaagtccacaacgcggcagcagaacggact 100474 Query: 355 tcacactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccata 410 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 100475 tcacactgtggtgtcctggagttcattgcagaagaaggcatgatctacatgccata 100530 Score = 129 bits (65), Expect = 3e-26 Identities = 113/129 (87%) Strand = Plus / Plus Query: 414 gatgatgcaaaatcttcttttgcaagaaggagatatggtgtttataaaaaatgccaacct 473 ||||||||||||||||||| | ||| || ||||||||||| |||||||||||||| || Sbjct: 100608 gatgatgcaaaatcttcttctaacagagggggatatggtgttcataaaaaatgccaatct 100667 Query: 474 cccaaagggcacatatgtgaagctgcagcctcatacaactgacttcttggacatttcaaa 533 ||| || || ||||||||||||||||||||||| ||||| |||||||| ||||||||||| Sbjct: 100668 ccctaaaggaacatatgtgaagctgcagcctcacacaacagacttcttagacatttcaaa 100727 Query: 534 tcccaaagc 542 || ||||| Sbjct: 100728 cccaaaagc 100736 Score = 107 bits (54), Expect = 1e-19 Identities = 159/194 (81%) Strand = Plus / Plus Query: 787 gaacctaagttcagccccttcactggtcctggtaggcgcctggatggcaagcctgctaaa 846 ||||| ||||||| |||||| ||||| ||||| ||||| |||||||| ||| || ||||| Sbjct: 101220 gaaccaaagttcatcccctttactggacctgggaggcgtctggatgggaaggctcctaaa 101279 Query: 847 gatctggatgcgtcatcctcttcgcctgcaaagcgacaagctaatgcaaccaacagtgtt 906 ||| ||||| ||| | || || |||||||| || |||||||||||||| ||||| || Sbjct: 101280 gataaggatgtatcagcttcatcccctgcaaaacggcaagctaatgcaacaaacagcgtg 101339 Query: 907 cagccatcagcagcctccacctcacagagcaccgcgcctcgtaaaaccacgggaaaactt 966 ||||| ||| |||| ||||| |||||||||| | ||||||||||||||| ||| ||| Sbjct: 101340 cagccctcaacagcgtccacatcacagagcagttcatctcgtaaaaccacggaaaagctt 101399 Query: 967 gtctttggctctgg 980 || |||||| |||| Sbjct: 101400 gtttttggccctgg 101413 Score = 93.7 bits (47), Expect = 2e-15 Identities = 71/79 (89%) Strand = Plus / Plus Query: 156 gtattttgaaggctacggttaccgtggaagtacttttgagcagacctatcgctgctaccc 215 |||||| |||||||| || |||||||||||||| || |||||||| |||||||||||||| Sbjct: 99544 gtatttcgaaggctatggctaccgtggaagtaccttcgagcagacatatcgctgctaccc 99603 Query: 216 tgcatcttttattgacaag 234 ||| ||||| ||||||||| Sbjct: 99604 tgcgtctttcattgacaag 99622 Score = 56.0 bits (28), Expect = 3e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 1030 aaggaggacccgaagaaagaggagccgaaattttcagcattcacgggaaagaagtactcc 1089 |||||||| || |||||||| || |||||||| ||||| || || |||| ||| ||||| Sbjct: 101665 aaggaggatcccaagaaagatgaaccgaaattctcagcttttacaggaaggaaatactca 101724 Query: 1090 ttgaagggctga 1101 |||||||||||| Sbjct: 101725 ttgaagggctga 101736
>gb|AY087347.1| Arabidopsis thaliana clone 34470 mRNA, complete sequence Length = 1201 Score = 204 bits (103), Expect = 6e-49 Identities = 352/435 (80%) Strand = Plus / Plus Query: 217 gcatcttttattgacaagccacagcttgaatctggtgacaaaattatcatgccaccttcg 276 ||||||||||||||||||||||| |||||| ||||||||| ||||| |||||||| || Sbjct: 162 gcatcttttattgacaagccacaacttgaaagtggtgacaagattataatgccaccatca 221 Query: 277 gcacttgatcgtcttgcgtctctgcatattgagtatcctatgctatttgaagtccgcaac 336 || ||||||||||| || ||| |||||||||| ||||| ||||| ||||| | || || Sbjct: 222 gcccttgatcgtctagcctctttgcatattgactatccgatgctgtttgagcttcgtaat 281 Query: 337 acaggagcagaacgtacttcacactgtggtgtcctagagttcattgcagaagaaggcatg 396 | ||| |||||| | |||||||||| ||||| |||||||||||||||||||||||| Sbjct: 282 gctggaattgaacgtgttacacactgtggagtccttgagttcattgcagaagaaggcatg 341 Query: 397 atctacatgccatactggatgatgcaaaatcttcttttgcaagaaggagatatggtgttt 456 || ||||||||||| ||||||||||||||||| || ||||||||||||| || ||| Sbjct: 342 atttacatgccatattggatgatgcaaaatctgctgctgcaagaaggagacattgtgaga 401 Query: 457 ataaaaaatgccaacctcccaaagggcacatatgtgaagctgcagcctcatacaactgac 516 | | ||||| || || |||||||| || || || || || ||||| || ||||| ||| Sbjct: 402 gttagaaatgtcactcttccaaagggaacttacgttaaactacagccccacacaacagac 461 Query: 517 ttcttggacatttcaaatcccaaagcgatcttggaaaaaactttgcggaactactcttgt 576 ||| |||| || || || || ||||| |||||||| | ||||| | || || || || Sbjct: 462 ttcctggatatatccaacccgaaagccatcttggagactgctttgagaaattattcatgc 521 Query: 577 ctaaccactggtgacagcattatggtggcatataataacaagaagtactacattgatata 636 ||||| | ||| || ||||||||||| |||| || || |||||||||| ||| |||||| Sbjct: 522 ctaactagtggggatagcattatggttccatacaacaataagaagtacttcatagatata 581 Query: 637 gttgaaacaaagcct 651 ||||||||||||||| Sbjct: 582 gttgaaacaaagcct 596
>dbj|AK226526.1| Arabidopsis thaliana mRNA for putative ubiquitin fusion-degradation protein, complete cds, clone: RAFL06-89-A08 Length = 1216 Score = 188 bits (95), Expect = 4e-44 Identities = 350/435 (80%) Strand = Plus / Plus Query: 217 gcatcttttattgacaagccacagcttgaatctggtgacaaaattatcatgccaccttcg 276 ||||||||||| ||||||||||| |||||| ||||||||| ||||| |||||||| || Sbjct: 167 gcatcttttatcgacaagccacaacttgaaagtggtgacaagattataatgccaccatca 226 Query: 277 gcacttgatcgtcttgcgtctctgcatattgagtatcctatgctatttgaagtccgcaac 336 || ||||||||||| || ||| |||||||||| ||||| ||||| ||||| | || || Sbjct: 227 gcccttgatcgtctagcctctttgcatattgactatccgatgctgtttgagcttcgtaat 286 Query: 337 acaggagcagaacgtacttcacactgtggtgtcctagagttcattgcagaagaaggcatg 396 | ||| |||||| | |||||||||| ||||| |||||||||||||||||||||||| Sbjct: 287 gctggaattgaacgtgttacacactgtggagtccttgagttcattgcagaagaaggcatg 346 Query: 397 atctacatgccatactggatgatgcaaaatcttcttttgcaagaaggagatatggtgttt 456 || ||||||||||| ||||||||||| ||||| || ||||||||||||| || ||| Sbjct: 347 atttacatgccatattggatgatgcagaatctgctgctgcaagaaggagacattgtgaga 406 Query: 457 ataaaaaatgccaacctcccaaagggcacatatgtgaagctgcagcctcatacaactgac 516 | | ||||| || || |||||||| || || || || || ||||| || ||||| ||| Sbjct: 407 gttagaaatgtcactcttccaaagggaacttacgttaaactacagccccacacaacagac 466 Query: 517 ttcttggacatttcaaatcccaaagcgatcttggaaaaaactttgcggaactactcttgt 576 ||| |||| || || || || ||||| |||||||| | ||||| | || || || || Sbjct: 467 ttcctggatatatccaacccgaaagccatcttggagactgctttgagaaattattcatgc 526 Query: 577 ctaaccactggtgacagcattatggtggcatataataacaagaagtactacattgatata 636 ||||| | ||| || ||||||||||| |||| || || |||||||||| ||| |||||| Sbjct: 527 ctaactagtggggatagcattatggttccatacaacaataagaagtacttcatagatata 586 Query: 637 gttgaaacaaagcct 651 ||||||||||||||| Sbjct: 587 gttgaaacaaagcct 601
>ref|NM_001036307.1| Arabidopsis thaliana unknown protein (AT2G21270) mRNA, complete cds Length = 1716 Score = 188 bits (95), Expect = 4e-44 Identities = 350/435 (80%) Strand = Plus / Plus Query: 217 gcatcttttattgacaagccacagcttgaatctggtgacaaaattatcatgccaccttcg 276 ||||||||||| ||||||||||| |||||| ||||||||| ||||| |||||||| || Sbjct: 571 gcatcttttatcgacaagccacaacttgaaagtggtgacaagattataatgccaccatca 630 Query: 277 gcacttgatcgtcttgcgtctctgcatattgagtatcctatgctatttgaagtccgcaac 336 || ||||||||||| || ||| |||||||||| ||||| ||||| ||||| | || || Sbjct: 631 gcccttgatcgtctagcctctttgcatattgactatccgatgctgtttgagcttcgtaat 690 Query: 337 acaggagcagaacgtacttcacactgtggtgtcctagagttcattgcagaagaaggcatg 396 | ||| |||||| | |||||||||| ||||| |||||||||||||||||||||||| Sbjct: 691 gctggaattgaacgtgttacacactgtggagtccttgagttcattgcagaagaaggcatg 750 Query: 397 atctacatgccatactggatgatgcaaaatcttcttttgcaagaaggagatatggtgttt 456 || ||||||||||| ||||||||||| ||||| || ||||||||||||| || ||| Sbjct: 751 atttacatgccatattggatgatgcagaatctgctgctgcaagaaggagacattgtgaga 810 Query: 457 ataaaaaatgccaacctcccaaagggcacatatgtgaagctgcagcctcatacaactgac 516 | | ||||| || || |||||||| || || || || || ||||| || ||||| ||| Sbjct: 811 gttagaaatgtcactcttccaaagggaacttacgttaaactacagccccacacaacagac 870 Query: 517 ttcttggacatttcaaatcccaaagcgatcttggaaaaaactttgcggaactactcttgt 576 ||| |||| || || || || ||||| |||||||| | ||||| | || || || || Sbjct: 871 ttcctggatatatccaacccgaaagccatcttggagactgctttgagaaattattcatgc 930 Query: 577 ctaaccactggtgacagcattatggtggcatataataacaagaagtactacattgatata 636 ||||| | ||| || ||||||||||| |||| || || |||||||||| ||| |||||| Sbjct: 931 ctaactagtggggatagcattatggttccatacaacaataagaagtacttcatagatata 990 Query: 637 gttgaaacaaagcct 651 ||||||||||||||| Sbjct: 991 gttgaaacaaagcct 1005
>ref|NM_127699.2| Arabidopsis thaliana unknown protein (AT2G21270) mRNA, complete cds Length = 1204 Score = 188 bits (95), Expect = 4e-44 Identities = 350/435 (80%) Strand = Plus / Plus Query: 217 gcatcttttattgacaagccacagcttgaatctggtgacaaaattatcatgccaccttcg 276 ||||||||||| ||||||||||| |||||| ||||||||| ||||| |||||||| || Sbjct: 162 gcatcttttatcgacaagccacaacttgaaagtggtgacaagattataatgccaccatca 221 Query: 277 gcacttgatcgtcttgcgtctctgcatattgagtatcctatgctatttgaagtccgcaac 336 || ||||||||||| || ||| |||||||||| ||||| ||||| ||||| | || || Sbjct: 222 gcccttgatcgtctagcctctttgcatattgactatccgatgctgtttgagcttcgtaat 281 Query: 337 acaggagcagaacgtacttcacactgtggtgtcctagagttcattgcagaagaaggcatg 396 | ||| |||||| | |||||||||| ||||| |||||||||||||||||||||||| Sbjct: 282 gctggaattgaacgtgttacacactgtggagtccttgagttcattgcagaagaaggcatg 341 Query: 397 atctacatgccatactggatgatgcaaaatcttcttttgcaagaaggagatatggtgttt 456 || ||||||||||| ||||||||||| ||||| || ||||||||||||| || ||| Sbjct: 342 atttacatgccatattggatgatgcagaatctgctgctgcaagaaggagacattgtgaga 401 Query: 457 ataaaaaatgccaacctcccaaagggcacatatgtgaagctgcagcctcatacaactgac 516 | | ||||| || || |||||||| || || || || || ||||| || ||||| ||| Sbjct: 402 gttagaaatgtcactcttccaaagggaacttacgttaaactacagccccacacaacagac 461 Query: 517 ttcttggacatttcaaatcccaaagcgatcttggaaaaaactttgcggaactactcttgt 576 ||| |||| || || || || ||||| |||||||| | ||||| | || || || || Sbjct: 462 ttcctggatatatccaacccgaaagccatcttggagactgctttgagaaattattcatgc 521 Query: 577 ctaaccactggtgacagcattatggtggcatataataacaagaagtactacattgatata 636 ||||| | ||| || ||||||||||| |||| || || |||||||||| ||| |||||| Sbjct: 522 ctaactagtggggatagcattatggttccatacaacaataagaagtacttcatagatata 581 Query: 637 gttgaaacaaagcct 651 ||||||||||||||| Sbjct: 582 gttgaaacaaagcct 596
>emb|BX819179.1|CNS0AA8E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB54ZB11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1551 Score = 170 bits (86), Expect = 8e-39 Identities = 194/230 (84%) Strand = Plus / Plus Query: 217 gcatcttttattgacaagccacagcttgaatctggtgacaaaattatcatgccaccttcg 276 ||||||||||| ||||||||||| |||||| ||||||||| ||||| |||||||| || Sbjct: 571 gcatcttttatcgacaagccacaacttgaaagtggtgacaagattataatgccaccatca 630 Query: 277 gcacttgatcgtcttgcgtctctgcatattgagtatcctatgctatttgaagtccgcaac 336 || ||||||||||| || ||| |||||||||| ||||| ||||| ||||| | || || Sbjct: 631 gcccttgatcgtctagcctctttgcatattgactatccgatgctgtttgagcttcgtaat 690 Query: 337 acaggagcagaacgtacttcacactgtggtgtcctagagttcattgcagaagaaggcatg 396 | ||| |||||| | |||||||||| ||||| |||||||||||||||||||||||| Sbjct: 691 gctggaattgaacgtgttacacactgtggagtccttgagttcattgcagaagaaggcatg 750 Query: 397 atctacatgccatactggatgatgcaaaatcttcttttgcaagaaggaga 446 || ||||||||||| ||||||||||| ||||| || ||||||||||||| Sbjct: 751 atttacatgccatattggatgatgcagaatctgctgctgcaagaaggaga 800 Score = 63.9 bits (32), Expect = 1e-06 Identities = 53/60 (88%) Strand = Plus / Plus Query: 592 agcattatggtggcatataataacaagaagtactacattgatatagttgaaacaaagcct 651 ||||||||||| |||| || || |||||||||| ||| ||||||||||||||||||||| Sbjct: 946 agcattatggttccatacaacaataagaagtacttcatagatatagttgaaacaaagcct 1005
>gb|AY535070.1| Beta vulgaris SNP marker MP0001 genomic sequence Length = 833 Score = 125 bits (63), Expect = 4e-25 Identities = 123/143 (86%) Strand = Plus / Plus Query: 583 actggtgacagcattatggtggcatataataacaagaagtactacattgatatagttgaa 642 ||||| || ||||| |||||||| |||||||||||||||||||||||||| || || ||| Sbjct: 44 actggagatagcatcatggtggcttataataacaagaagtactacattgacattgtggaa 103 Query: 643 acaaagccttccagtgctataagtataattgagactgattgtgaggttgacttcgcccca 702 |||||||| || | ||| || ||||| |||||||| ||||||||||| || || ||||| Sbjct: 104 acaaagccctctaatgcaattagtattattgagacagattgtgaggtcgattttgcccct 163 Query: 703 ccacttgactataaagaacctga 725 || ||||| |||||||||||||| Sbjct: 164 cctcttgattataaagaacctga 186
>dbj|AK073711.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061G23, full insert sequence Length = 1306 Score = 107 bits (54), Expect = 1e-19 Identities = 234/294 (79%) Strand = Plus / Plus Query: 354 ttcacactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactg 413 ||||||||||||||| || || || | |||||||||||||||||| |||||| ||||| Sbjct: 356 ttcacactgtggtgtgctggaatttgtggcagaagaaggcatgatcatcatgccctactg 415 Query: 414 gatgatgcaaaatcttcttttgcaagaaggagatatggtgtttataaaaaatgccaacct 473 |||||||||||| | ||| | ||||| || || | || | |||||||| | | ||| Sbjct: 416 gatgatgcaaaacatgcttcttcaagagggtgacactgtccgtgtaaaaaatacaaccct 475 Query: 474 cccaaagggcacatatgtgaagctgcagcctcatacaactgacttcttggacatttcaaa 533 || ||||| |||||||| ||| |||||||||| ||||||||||| |||||||| ||||| Sbjct: 476 tcccaagggtacatatgtcaagttgcagcctcacacaactgactttttggacatctcaaa 535 Query: 534 tcccaaagcgatcttggaaaaaactttgcggaactactcttgtctaaccactggtgacag 593 ||| || || ||| |||| ||||| | | |||| ||||||| ||||||| || || || Sbjct: 536 tccgaaggccatcctggagaaaacactaagaaacttctcttgtttaaccaccggcgatag 595 Query: 594 cattatggtggcatataataacaagaagtactacattgatatagttgaaacaaa 647 || ||||| || || || ||||| | ||||||||||| || ||||||||||| Sbjct: 596 tatcatggtagcttacaacaacaaacaatactacattgacattgttgaaacaaa 649 Score = 75.8 bits (38), Expect = 4e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 217 gcatcttttattgacaagccacagcttgaatctggtgacaaaattatcatgccaccttcg 276 |||||||| ||||||||||||| || ||| ||| |||||| | || |||||||| || Sbjct: 219 gcatctttctttgacaagccacacctggaaggtggcgacaaagtaattatgccaccatct 278 Query: 277 gcacttgatcgtcttgcgtctctgcatattgagtatcctatgctatttga 326 || |||||||| ||||| |||||||| ||||| ||||||||||| ||||| Sbjct: 279 gctcttgatcggcttgcttctctgcacattgaatatcctatgctgtttga 328
>gb|AY105875.1| Zea mays PCO125270 mRNA sequence Length = 1555 Score = 97.6 bits (49), Expect = 1e-16 Identities = 199/249 (79%) Strand = Plus / Plus Query: 478 aagggcacatatgtgaagctgcagcctcatacaactgacttcttggacatttcaaatccc 537 ||||||||||||||||| |||| ||||| |||||||| || |||| |||||||| || Sbjct: 720 aagggcacatatgtgaaattgcaacctcacacaactgattttctggatatttcaaacccg 779 Query: 538 aaagcgatcttggaaaaaactttgcggaactactcttgtctaaccactggtgacagcatt 597 ||||| ||||||||||||||||| | || | ||| || ||||||| || |||||||| Sbjct: 780 aaagccatcttggaaaaaactttaagaaatttctcctgcttaaccacgggagacagcatc 839 Query: 598 atggtggcatataataacaagaagtactacattgatatagttgaaacaaagccttccagt 657 ||||| || || || ||||| | || || |||||||| ||||||||||||||| | | Sbjct: 840 atggtagcctacaacaacaaacaatattatattgatattgttgaaacaaagcctgcttct 899 Query: 658 gctataagtataattgagactgattgtgaggttgacttcgccccaccacttgactataaa 717 || | || || |||||||| || ||||| || ||||| || || || ||||| |||||| Sbjct: 900 gcggttagcattattgagacagactgtgaagtggactttgcgcctcctcttgattataaa 959 Query: 718 gaacctgag 726 ||||||||| Sbjct: 960 gaacctgag 968 Score = 71.9 bits (36), Expect = 6e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 354 ttcacactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactg 413 ||||||||||||||| | ||||| |||||||||||||||||||| |||||| || || Sbjct: 596 ttcacactgtggtgttttggagtttgttgcagaagaaggcatgatcatcatgccctattg 655 Query: 414 gatgatgcaaaa 425 |||||||||||| Sbjct: 656 gatgatgcaaaa 667 Score = 60.0 bits (30), Expect = 2e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 265 atgccaccttcggcacttgatcgtcttgcgtctctgcatattgagtatcctatgctattt 324 ||||||||||| || |||||||||||||| || |||| || ||||| |||||||||||| Sbjct: 507 atgccaccttctgcccttgatcgtcttgcttccttgcacatcgagtaccctatgctattt 566 Query: 325 ga 326 || Sbjct: 567 ga 568
>ref|NM_001060164.1| Oryza sativa (japonica cultivar-group) Os04g0577000 (Os04g0577000) mRNA, complete cds Length = 1305 Score = 95.6 bits (48), Expect = 4e-16 Identities = 165/204 (80%) Strand = Plus / Plus Query: 354 ttcacactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactg 413 ||||||||||||||| || || || | |||||||||||||||||| |||||| ||||| Sbjct: 355 ttcacactgtggtgtgctggaatttgtggcagaagaaggcatgatcatcatgccctactg 414 Query: 414 gatgatgcaaaatcttcttttgcaagaaggagatatggtgtttataaaaaatgccaacct 473 |||||||||||| | ||| | ||||| || || | || | |||||||| | | ||| Sbjct: 415 gatgatgcaaaacatgcttcttcaagagggtgacactgtccgtgtaaaaaatacaaccct 474 Query: 474 cccaaagggcacatatgtgaagctgcagcctcatacaactgacttcttggacatttcaaa 533 || ||||| |||||||| ||| |||||||||| ||||||||||| |||||||| ||||| Sbjct: 475 tcccaagggtacatatgtcaagttgcagcctcacacaactgactttttggacatctcaaa 534 Query: 534 tcccaaagcgatcttggaaaaaac 557 ||| || || ||| |||| ||||| Sbjct: 535 tccgaaggccatcctggagaaaac 558 Score = 75.8 bits (38), Expect = 4e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 217 gcatcttttattgacaagccacagcttgaatctggtgacaaaattatcatgccaccttcg 276 |||||||| ||||||||||||| || ||| ||| |||||| | || |||||||| || Sbjct: 218 gcatctttctttgacaagccacacctggaaggtggcgacaaagtaattatgccaccatct 277 Query: 277 gcacttgatcgtcttgcgtctctgcatattgagtatcctatgctatttga 326 || |||||||| ||||| |||||||| ||||| ||||||||||| ||||| Sbjct: 278 gctcttgatcggcttgcttctctgcacattgaatatcctatgctgtttga 327
>ref|NM_202980.1| Arabidopsis thaliana unknown protein (AT4G38930) mRNA, complete cds Length = 1177 Score = 87.7 bits (44), Expect = 1e-13 Identities = 83/96 (86%) Strand = Plus / Plus Query: 358 cactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactggatg 417 ||||| || ||||| |||||||| |||||||||||| |||| ||||| || ||||||||| Sbjct: 274 cactgcggagtccttgagttcatcgcagaagaaggcgtgatttacattccctactggatg 333 Query: 418 atgcaaaatcttcttttgcaagaaggagatatggtg 453 ||||| ||| | || |||||||||||||| |||||| Sbjct: 334 atgcagaatttgctgttgcaagaaggagacatggtg 369 Score = 71.9 bits (36), Expect = 6e-09 Identities = 120/148 (81%) Strand = Plus / Plus Query: 180 tggaagtacttttgagcagacctatcgctgctaccctgcatcttttattgacaagccaca 239 ||||| ||| ||||||||||| || || || || || |||| |||||||| ||||| || Sbjct: 96 tggaactacctttgagcagacttaccggtgttatccctcatcctttattgataagcctca 155 Query: 240 gcttgaatctggtgacaaaattatcatgccaccttcggcacttgatcgtcttgcgtctct 299 ||||| ||||||||| ||||| |||||||| || || ||||||||||| || ||| | Sbjct: 156 aattgaaagtggtgacaagattataatgccaccatcagcccttgatcgtctagcttcttt 215 Query: 300 gcatattgagtatcctatgctatttgaa 327 ||| ||||| ||||| ||||| |||||| Sbjct: 216 gcagattgattatccaatgctctttgaa 243 Score = 46.1 bits (23), Expect = 0.33 Identities = 86/107 (80%) Strand = Plus / Plus Query: 592 agcattatggtggcatataataacaagaagtactacattgatatagttgaaacaaagcct 651 ||||||||||| |||| || || ||||| |||| ||| || ||||| || |||||||| Sbjct: 508 agcattatggtcccatacaacaataagaaatacttcatagacatagtggaggcaaagcct 567 Query: 652 tccagtgctataagtataattgagactgattgtgaggttgacttcgc 698 || | || ||| || || ||||| |||||||| |||||||| ||||| Sbjct: 568 tctaatggtattagcatcattgaaactgattgcgaggttgatttcgc 614
>ref|NM_120053.2| Arabidopsis thaliana unknown protein (AT4G38930) mRNA, complete cds Length = 1202 Score = 87.7 bits (44), Expect = 1e-13 Identities = 83/96 (86%) Strand = Plus / Plus Query: 358 cactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactggatg 417 ||||| || ||||| |||||||| |||||||||||| |||| ||||| || ||||||||| Sbjct: 294 cactgcggagtccttgagttcatcgcagaagaaggcgtgatttacattccctactggatg 353 Query: 418 atgcaaaatcttcttttgcaagaaggagatatggtg 453 ||||| ||| | || |||||||||||||| |||||| Sbjct: 354 atgcagaatttgctgttgcaagaaggagacatggtg 389 Score = 71.9 bits (36), Expect = 6e-09 Identities = 120/148 (81%) Strand = Plus / Plus Query: 180 tggaagtacttttgagcagacctatcgctgctaccctgcatcttttattgacaagccaca 239 ||||| ||| ||||||||||| || || || || || |||| |||||||| ||||| || Sbjct: 116 tggaactacctttgagcagacttaccggtgttatccctcatcctttattgataagcctca 175 Query: 240 gcttgaatctggtgacaaaattatcatgccaccttcggcacttgatcgtcttgcgtctct 299 ||||| ||||||||| ||||| |||||||| || || ||||||||||| || ||| | Sbjct: 176 aattgaaagtggtgacaagattataatgccaccatcagcccttgatcgtctagcttcttt 235 Query: 300 gcatattgagtatcctatgctatttgaa 327 ||| ||||| ||||| ||||| |||||| Sbjct: 236 gcagattgattatccaatgctctttgaa 263 Score = 46.1 bits (23), Expect = 0.33 Identities = 86/107 (80%) Strand = Plus / Plus Query: 592 agcattatggtggcatataataacaagaagtactacattgatatagttgaaacaaagcct 651 ||||||||||| |||| || || ||||| |||| ||| || ||||| || |||||||| Sbjct: 528 agcattatggtcccatacaacaataagaaatacttcatagacatagtggaggcaaagcct 587 Query: 652 tccagtgctataagtataattgagactgattgtgaggttgacttcgc 698 || | || ||| || || ||||| |||||||| |||||||| ||||| Sbjct: 588 tctaatggtattagcatcattgaaactgattgcgaggttgatttcgc 634
>gb|AY132013.1| Arabidopsis thaliana AT4g38930/F19H22_30 mRNA, complete cds Length = 936 Score = 87.7 bits (44), Expect = 1e-13 Identities = 83/96 (86%) Strand = Plus / Plus Query: 358 cactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactggatg 417 ||||| || ||||| |||||||| |||||||||||| |||| ||||| || ||||||||| Sbjct: 205 cactgcggagtccttgagttcatcgcagaagaaggcgtgatttacattccctactggatg 264 Query: 418 atgcaaaatcttcttttgcaagaaggagatatggtg 453 ||||| ||| | || |||||||||||||| |||||| Sbjct: 265 atgcagaatttgctgttgcaagaaggagacatggtg 300 Score = 71.9 bits (36), Expect = 6e-09 Identities = 120/148 (81%) Strand = Plus / Plus Query: 180 tggaagtacttttgagcagacctatcgctgctaccctgcatcttttattgacaagccaca 239 ||||| ||| ||||||||||| || || || || || |||| |||||||| ||||| || Sbjct: 27 tggaactacctttgagcagacttaccggtgttatccctcatcctttattgataagcctca 86 Query: 240 gcttgaatctggtgacaaaattatcatgccaccttcggcacttgatcgtcttgcgtctct 299 ||||| ||||||||| ||||| |||||||| || || ||||||||||| || ||| | Sbjct: 87 aattgaaagtggtgacaagattataatgccaccatcagcccttgatcgtctagcttcttt 146 Query: 300 gcatattgagtatcctatgctatttgaa 327 ||| ||||| ||||| ||||| |||||| Sbjct: 147 gcagattgattatccaatgctctttgaa 174 Score = 46.1 bits (23), Expect = 0.33 Identities = 86/107 (80%) Strand = Plus / Plus Query: 592 agcattatggtggcatataataacaagaagtactacattgatatagttgaaacaaagcct 651 ||||||||||| |||| || || ||||| |||| ||| || ||||| || |||||||| Sbjct: 439 agcattatggtcccatacaacaataagaaatacttcatagacatagtggaggcaaagcct 498 Query: 652 tccagtgctataagtataattgagactgattgtgaggttgacttcgc 698 || | || ||| || || ||||| |||||||| |||||||| ||||| Sbjct: 499 tctaatggtattagcatcattgaaactgattgcgaggttgatttcgc 545
>dbj|AK221534.1| Arabidopsis thaliana mRNA for putative ubiquitin-dependent proteolytic protein, complete cds, clone: RAFL07-69-M16 Length = 1195 Score = 87.7 bits (44), Expect = 1e-13 Identities = 83/96 (86%) Strand = Plus / Plus Query: 358 cactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactggatg 417 ||||| || ||||| |||||||| |||||||||||| |||| ||||| || ||||||||| Sbjct: 294 cactgcggagtccttgagttcatcgcagaagaaggcgtgatttacattccctactggatg 353 Query: 418 atgcaaaatcttcttttgcaagaaggagatatggtg 453 ||||| ||| | || |||||||||||||| |||||| Sbjct: 354 atgcagaatttgctgttgcaagaaggagacatggtg 389 Score = 71.9 bits (36), Expect = 6e-09 Identities = 120/148 (81%) Strand = Plus / Plus Query: 180 tggaagtacttttgagcagacctatcgctgctaccctgcatcttttattgacaagccaca 239 ||||| ||| ||||||||||| || || || || || |||| |||||||| ||||| || Sbjct: 116 tggaactacctttgagcagacttaccggtgttatccctcatcctttattgataagcctca 175 Query: 240 gcttgaatctggtgacaaaattatcatgccaccttcggcacttgatcgtcttgcgtctct 299 ||||| ||||||||| ||||| |||||||| || || ||||||||||| || ||| | Sbjct: 176 aattgaaagtggtgacaagattataatgccaccatcagcccttgatcgtctagcttcttt 235 Query: 300 gcatattgagtatcctatgctatttgaa 327 ||| ||||| ||||| ||||| |||||| Sbjct: 236 gcagattgattatccaatgctctttgaa 263 Score = 46.1 bits (23), Expect = 0.33 Identities = 86/107 (80%) Strand = Plus / Plus Query: 592 agcattatggtggcatataataacaagaagtactacattgatatagttgaaacaaagcct 651 ||||||||||| |||| || || ||||| |||| ||| || ||||| || |||||||| Sbjct: 528 agcattatggtcccatacaacaataagaaatacttcatagacatagtggaggcaaagcct 587 Query: 652 tccagtgctataagtataattgagactgattgtgaggttgacttcgc 698 || | || ||| || || ||||| |||||||| |||||||| ||||| Sbjct: 588 tctaatggtattagcatcattgaaactgattgcgaggttgatttcgc 634
>gb|AF419602.1|AF419602 Arabidopsis thaliana AT4g38930/F19H22_30 mRNA, complete cds Length = 1222 Score = 87.7 bits (44), Expect = 1e-13 Identities = 83/96 (86%) Strand = Plus / Plus Query: 358 cactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactggatg 417 ||||| || ||||| |||||||| |||||||||||| |||| ||||| || ||||||||| Sbjct: 294 cactgcggagtccttgagttcatcgcagaagaaggcgtgatttacattccctactggatg 353 Query: 418 atgcaaaatcttcttttgcaagaaggagatatggtg 453 ||||| ||| | || |||||||||||||| |||||| Sbjct: 354 atgcagaatttgctgttgcaagaaggagacatggtg 389 Score = 71.9 bits (36), Expect = 6e-09 Identities = 120/148 (81%) Strand = Plus / Plus Query: 180 tggaagtacttttgagcagacctatcgctgctaccctgcatcttttattgacaagccaca 239 ||||| ||| ||||||||||| || || || || || |||| |||||||| ||||| || Sbjct: 116 tggaactacctttgagcagacttaccggtgttatccctcatcctttattgataagcctca 175 Query: 240 gcttgaatctggtgacaaaattatcatgccaccttcggcacttgatcgtcttgcgtctct 299 ||||| ||||||||| ||||| |||||||| || || ||||||||||| || ||| | Sbjct: 176 aattgaaagtggtgacaagattataatgccaccatcagcccttgatcgtctagcttcttt 235 Query: 300 gcatattgagtatcctatgctatttgaa 327 ||| ||||| ||||| ||||| |||||| Sbjct: 236 gcagattgattatccaatgctctttgaa 263 Score = 46.1 bits (23), Expect = 0.33 Identities = 86/107 (80%) Strand = Plus / Plus Query: 592 agcattatggtggcatataataacaagaagtactacattgatatagttgaaacaaagcct 651 ||||||||||| |||| || || ||||| |||| ||| || ||||| || |||||||| Sbjct: 528 agcattatggtcccatacaacaataagaaatacttcatagacatagtggaggcaaagcct 587 Query: 652 tccagtgctataagtataattgagactgattgtgaggttgacttcgc 698 || | || ||| || || ||||| |||||||| |||||||| ||||| Sbjct: 588 tctaatggtattagcatcattgaaactgattgcgaggttgatttcgc 634
>emb|BX826549.1|CNS0A4GV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB38ZE01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1068 Score = 87.7 bits (44), Expect = 1e-13 Identities = 83/96 (86%) Strand = Plus / Plus Query: 358 cactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactggatg 417 ||||| || ||||| |||||||| |||||||||||| |||| ||||| || ||||||||| Sbjct: 274 cactgcggagtccttgagttcatcgcagaagaaggcgtgatttacattccctactggatg 333 Query: 418 atgcaaaatcttcttttgcaagaaggagatatggtg 453 ||||| ||| | || |||||||||||||| |||||| Sbjct: 334 atgcagaatttgctgttgcaagaaggagacatggtg 369 Score = 71.9 bits (36), Expect = 6e-09 Identities = 120/148 (81%) Strand = Plus / Plus Query: 180 tggaagtacttttgagcagacctatcgctgctaccctgcatcttttattgacaagccaca 239 ||||| ||| ||||||||||| || || || || || |||| |||||||| ||||| || Sbjct: 96 tggaactacctttgagcagacttaccggtgttatccctcatcctttattgataagcctca 155 Query: 240 gcttgaatctggtgacaaaattatcatgccaccttcggcacttgatcgtcttgcgtctct 299 ||||| ||||||||| ||||| |||||||| || || ||||||||||| || ||| | Sbjct: 156 aattgaaagtggtgacaagattataatgccaccatcagcccttgatcgtctagcttcttt 215 Query: 300 gcatattgagtatcctatgctatttgaa 327 ||| ||||| ||||| ||||| |||||| Sbjct: 216 gcagattgattatccaatgctctttgaa 243 Score = 46.1 bits (23), Expect = 0.33 Identities = 86/107 (80%) Strand = Plus / Plus Query: 592 agcattatggtggcatataataacaagaagtactacattgatatagttgaaacaaagcct 651 ||||||||||| |||| || || ||||| |||| ||| || ||||| || |||||||| Sbjct: 508 agcattatggtcccatacaacaataagaaatacttcatagacatagtggaggcaaagcct 567 Query: 652 tccagtgctataagtataattgagactgattgtgaggttgacttcgc 698 || | || ||| || || ||||| |||||||| |||||||| ||||| Sbjct: 568 tctaatggtattagcatcattgaaactgattgcgaggttgatttcgc 614
>gb|AC007142.7| Arabidopsis thaliana chromosome 2 clone F7O24 map mi238, complete sequence Length = 20078 Score = 85.7 bits (43), Expect = 4e-13 Identities = 52/55 (94%) Strand = Plus / Minus Query: 356 cacactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccata 410 |||||||||| ||||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 262 cacactgtggagtccttgagttcattgcagaagaaggcatgatttacatgccata 208
>gb|AC006841.7| Arabidopsis thaliana chromosome 2 clone F3K23 map mi148, complete sequence Length = 125045 Score = 85.7 bits (43), Expect = 4e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 356 cacactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccata 410 |||||||||| ||||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 5819 cacactgtggagtccttgagttcattgcagaagaaggcatgatttacatgccata 5873 Score = 63.9 bits (32), Expect = 1e-06 Identities = 53/60 (88%) Strand = Plus / Plus Query: 592 agcattatggtggcatataataacaagaagtactacattgatatagttgaaacaaagcct 651 ||||||||||| |||| || || |||||||||| ||| ||||||||||||||||||||| Sbjct: 6337 agcattatggttccatacaacaataagaagtacttcatagatatagttgaaacaaagcct 6396
>gb|DQ191648.1| Solanum tuberosum unknown mRNA Length = 1244 Score = 81.8 bits (41), Expect = 6e-12 Identities = 113/137 (82%) Strand = Plus / Plus Query: 190 tttgagcagacctatcgctgctaccctgcatcttttattgacaagccacagcttgaatct 249 ||||||||||| || || ||||| ||||||||||| ||||| |||||||| || ||| | Sbjct: 138 tttgagcagacgtaccggtgctatcctgcatctttcattgataagccacaactagaaaat 197 Query: 250 ggtgacaaaattatcatgccaccttcggcacttgatcgtcttgcgtctctgcatattgag 309 || ||||||||||| ||||| || || || ||||||||||| || || || || ||||| Sbjct: 198 ggagacaaaattataatgcctccctctgctcttgatcgtctagcatcacttcacattgat 257 Query: 310 tatcctatgctatttga 326 ||||| ||| ||||||| Sbjct: 258 tatccaatgttatttga 274 Score = 67.9 bits (34), Expect = 9e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 373 gagttcattgcagaagaaggcatgatctacatgccatactggatgatgcaaaat 426 ||||||||||||||||| |||||||| || |||||||| ||||||||| ||||| Sbjct: 321 gagttcattgcagaagagggcatgatatatatgccatattggatgatggaaaat 374 Score = 50.1 bits (25), Expect = 0.021 Identities = 55/65 (84%) Strand = Plus / Plus Query: 661 ataagtataattgagactgattgtgaggttgacttcgccccaccacttgactataaagaa 720 |||||||| |||||||| || ||||| || ||||| || || |||||||| || |||||| Sbjct: 609 ataagtattattgagacagactgtgaagtagactttgctcccccacttgattacaaagaa 668 Query: 721 cctga 725 ||||| Sbjct: 669 cctga 673
>emb|BX827766.1|CNS0A4F5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH1ZB08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1061 Score = 79.8 bits (40), Expect = 2e-11 Identities = 82/96 (85%) Strand = Plus / Plus Query: 358 cactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactggatg 417 ||||| || ||||| |||||||| |||||||||||| |||| ||||| || ||||||||| Sbjct: 274 cactgcggagtccttgagttcatcgcagaagaaggcgtgatttacattccctactggatg 333 Query: 418 atgcaaaatcttcttttgcaagaaggagatatggtg 453 ||||| ||| | || |||| ||||||||| |||||| Sbjct: 334 atgcagaatttgctgttgcgagaaggagacatggtg 369 Score = 71.9 bits (36), Expect = 6e-09 Identities = 120/148 (81%) Strand = Plus / Plus Query: 180 tggaagtacttttgagcagacctatcgctgctaccctgcatcttttattgacaagccaca 239 ||||| ||| ||||||||||| || || || || || |||| |||||||| ||||| || Sbjct: 96 tggaactacctttgagcagacttaccggtgttatccctcatcctttattgataagcctca 155 Query: 240 gcttgaatctggtgacaaaattatcatgccaccttcggcacttgatcgtcttgcgtctct 299 ||||| ||||||||| ||||| |||||||| || || ||||||||||| || ||| | Sbjct: 156 aattgaaagtggtgacaagattataatgccaccatcagcccttgatcgtctagcttcttt 215 Query: 300 gcatattgagtatcctatgctatttgaa 327 ||| ||||| ||||| ||||| |||||| Sbjct: 216 gcagattgattatccaatgctctttgaa 243 Score = 46.1 bits (23), Expect = 0.33 Identities = 86/107 (80%) Strand = Plus / Plus Query: 592 agcattatggtggcatataataacaagaagtactacattgatatagttgaaacaaagcct 651 ||||||||||| |||| || || ||||| |||| ||| || ||||| || |||||||| Sbjct: 509 agcattatggtcccatacaacaataagaaatacttcatagacatagtggaggcaaagcct 568 Query: 652 tccagtgctataagtataattgagactgattgtgaggttgacttcgc 698 || | || ||| || || ||||| |||||||| |||||||| ||||| Sbjct: 569 tctaatggtattagcatcattgaaactgattgcgaggttgatttcgc 615
>gb|AC189480.1| Brassica rapa subsp. pekinensis clone KBrB082F21, complete sequence Length = 131291 Score = 77.8 bits (39), Expect = 9e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 557 ctttgcggaactactcttgtctaaccactggtgacagcattatggtggcatataataaca 616 ||||| |||| ||||| || ||||||||||| || ||||||||||| |||| || || | Sbjct: 127613 ctttgaggaattactcatgcctaaccactggggatagcattatggttccatacaacaata 127672 Query: 617 agaagtactacattgatatagttgaaacaaagcct 651 ||||||||| || ||||||||||||||||||||| Sbjct: 127673 agaagtactttatagatatagttgaaacaaagcct 127707 Score = 73.8 bits (37), Expect = 1e-09 Identities = 52/57 (91%) Strand = Plus / Plus Query: 354 ttcacactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccata 410 |||||||||||| ||||| |||||||| || |||||||||||||| ||||||||||| Sbjct: 127235 ttcacactgtggagtcctcgagttcatcgctgaagaaggcatgatttacatgccata 127291 Score = 50.1 bits (25), Expect = 0.021 Identities = 40/45 (88%) Strand = Plus / Plus Query: 190 tttgagcagacctatcgctgctaccctgcatcttttattgacaag 234 ||||||||||| || || ||||| |||||||||||||| |||||| Sbjct: 126688 tttgagcagacttaccggtgctatcctgcatcttttatcgacaag 126732
>gb|AC155346.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH081N08, complete sequence Length = 56991 Score = 77.8 bits (39), Expect = 9e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 557 ctttgcggaactactcttgtctaaccactggtgacagcattatggtggcatataataaca 616 ||||| |||| ||||| || ||||||||||| || ||||||||||| |||| || || | Sbjct: 11942 ctttgaggaattactcatgcctaaccactggggatagcattatggttccatacaacaata 12001 Query: 617 agaagtactacattgatatagttgaaacaaagcct 651 ||||||||| || ||||||||||||||||||||| Sbjct: 12002 agaagtactttatagatatagttgaaacaaagcct 12036 Score = 73.8 bits (37), Expect = 1e-09 Identities = 52/57 (91%) Strand = Plus / Plus Query: 354 ttcacactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccata 410 |||||||||||| ||||| |||||||| || |||||||||||||| ||||||||||| Sbjct: 11564 ttcacactgtggagtcctcgagttcatcgctgaagaaggcatgatttacatgccata 11620 Score = 50.1 bits (25), Expect = 0.021 Identities = 40/45 (88%) Strand = Plus / Plus Query: 190 tttgagcagacctatcgctgctaccctgcatcttttattgacaag 234 ||||||||||| || || ||||| |||||||||||||| |||||| Sbjct: 11017 tttgagcagacttaccggtgctatcctgcatcttttatcgacaag 11061
>gb|AC140035.9| Medicago truncatula clone mth2-25n18, complete sequence Length = 120870 Score = 75.8 bits (38), Expect = 4e-10 Identities = 101/122 (82%) Strand = Plus / Plus Query: 583 actggtgacagcattatggtggcatataataacaagaagtactacattgatatagttgaa 642 ||||| || |||||||||||||| || ||||||||||| || || |||||||| || || Sbjct: 110766 actggagatagcattatggtggcttacaataacaagaaatattatattgatattgtagag 110825 Query: 643 acaaagccttccagtgctataagtataattgagactgattgtgaggttgacttcgcccca 702 | |||||| ||| ||||||||| || |||||||| || ||||| || ||||| |||||| Sbjct: 110826 agcaagcctgccaatgctataagcatcattgagaccgactgtgaagtggactttgcccca 110885 Query: 703 cc 704 || Sbjct: 110886 cc 110887 Score = 67.9 bits (34), Expect = 9e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 361 tgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactgg 414 |||||||| || ||||||||||| || ||||||||||| ||||||||||||||| Sbjct: 109126 tgtggtgttctggagttcattgctgaggaaggcatgatatacatgccatactgg 109179 Score = 52.0 bits (26), Expect = 0.005 Identities = 53/62 (85%) Strand = Plus / Plus Query: 475 ccaaagggcacatatgtgaagctgcagcctcatacaactgacttcttggacatttcaaat 534 |||||||| |||||||| ||| | |||||||| |||| ||||||||||| ||||| ||| Sbjct: 109352 ccaaagggaacatatgttaagttacagcctcacacaaaagacttcttggatatttccaat 109411 Query: 535 cc 536 || Sbjct: 109412 cc 109413 Score = 50.1 bits (25), Expect = 0.021 Identities = 37/41 (90%) Strand = Plus / Plus Query: 190 tttgagcagacctatcgctgctaccctgcatcttttattga 230 ||||||||||| ||||| || |||||||| ||||||||||| Sbjct: 108445 tttgagcagacgtatcgatgttaccctgcttcttttattga 108485 Score = 42.1 bits (21), Expect = 5.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 295 tctctgcatattgagtatcctatgctatttgaa 327 |||||||||||||| ||||| ||| |||||||| Sbjct: 109060 tctctgcatattgattatccgatgttatttgaa 109092
>dbj|AK119957.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-C12, full insert sequence Length = 1108 Score = 75.8 bits (38), Expect = 4e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 217 gcatcttttattgacaagccacagcttgaatctggtgacaaaattatcatgccaccttcg 276 |||||||| ||||||||||||| || ||| ||| |||||| | || |||||||| || Sbjct: 193 gcatctttctttgacaagccacacctggaaggtggcgacaaagtaattatgccaccatct 252 Query: 277 gcacttgatcgtcttgcgtctctgcatattgagtatcctatgctatttga 326 || |||||||| ||||| |||||||| ||||| ||||||||||| ||||| Sbjct: 253 gctcttgatcggcttgcttctctgcacattgaatatcctatgctgtttga 302 Score = 75.8 bits (38), Expect = 4e-10 Identities = 137/170 (80%) Strand = Plus / Plus Query: 478 aagggcacatatgtgaagctgcagcctcatacaactgacttcttggacatttcaaatccc 537 ||||| |||||||| ||| |||||||||| ||||||||||| |||||||| |||||||| Sbjct: 454 aagggtacatatgtcaagttgcagcctcacacaactgactttttggacatctcaaatccg 513 Query: 538 aaagcgatcttggaaaaaactttgcggaactactcttgtctaaccactggtgacagcatt 597 | || ||| |||| ||||| | | |||| ||||||| ||||||| || || || || Sbjct: 514 agggccatcctggagaaaacactaagaaacttctcttgtttaaccaccggcgatagtatc 573 Query: 598 atggtggcatataataacaagaagtactacattgatatagttgaaacaaa 647 ||||| || || || ||||| | ||||||||||| || ||||||||||| Sbjct: 574 atggtagcttacaacaacaaacaatactacattgacattgttgaaacaaa 623 Score = 71.9 bits (36), Expect = 6e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 354 ttcacactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactg 413 ||||||||||||||| || || || | |||||||||||||||||| |||||| ||||| Sbjct: 330 ttcacactgtggtgtgctggaatttgtggcagaagaaggcatgatcatcatgccctactg 389 Query: 414 gatgatgcaaaa 425 |||||||||||| Sbjct: 390 gatgatgcaaaa 401
>gb|BT012760.1| Lycopersicon esculentum clone 113704F, mRNA sequence Length = 1128 Score = 73.8 bits (37), Expect = 1e-09 Identities = 103/125 (82%) Strand = Plus / Plus Query: 190 tttgagcagacctatcgctgctaccctgcatcttttattgacaagccacagcttgaatct 249 ||||||||||| || || ||||| ||||||||||| ||||| |||||||| | ||| | Sbjct: 108 tttgagcagacttaccggtgctatcctgcatctttcattgataagccacaaatagaaaat 167 Query: 250 ggtgacaaaattatcatgccaccttcggcacttgatcgtcttgcgtctctgcatattgag 309 || ||||||||||| ||||| || || || ||||||||||| || || || |||||||| Sbjct: 168 ggagacaaaattataatgcctccctctgctcttgatcgtctagcatcacttcatattgat 227 Query: 310 tatcc 314 ||||| Sbjct: 228 tatcc 232 Score = 60.0 bits (30), Expect = 2e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 373 gagttcattgcagaagaaggcatgatctacatgccatactggatgatgcaaaat 426 ||||||||||||||||| ||| |||| || |||||||| ||||||||| ||||| Sbjct: 291 gagttcattgcagaagagggcttgatatatatgccatattggatgatggaaaat 344 Score = 50.1 bits (25), Expect = 0.021 Identities = 55/65 (84%) Strand = Plus / Plus Query: 661 ataagtataattgagactgattgtgaggttgacttcgccccaccacttgactataaagaa 720 |||||||| |||||||| || ||||| || ||||| || || |||||||| || |||||| Sbjct: 579 ataagtattattgagacagactgtgaagtagactttgctcccccacttgattacaaagaa 638 Query: 721 cctga 725 ||||| Sbjct: 639 cctga 643
>emb|CR855139.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0404F02, complete sequence Length = 130181 Score = 69.9 bits (35), Expect = 2e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 478 aagggcacatatgtgaagctgcagcctcatacaactgacttcttggacatttcaaatcc 536 ||||| |||||||| ||| |||||||||| ||||||||||| |||||||| |||||||| Sbjct: 11548 aagggtacatatgtcaagttgcagcctcacacaactgactttttggacatctcaaatcc 11606 Score = 50.1 bits (25), Expect = 0.021 Identities = 52/61 (85%) Strand = Plus / Plus Query: 354 ttcacactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactg 413 ||||||||||||||| || || || | |||||||||||||||||| |||||| ||||| Sbjct: 11324 ttcacactgtggtgtgctggaatttgtggcagaagaaggcatgatcatcatgccctactg 11383 Query: 414 g 414 | Sbjct: 11384 g 11384
>ref|NM_201828.1| Arabidopsis thaliana unknown protein (AT2G29070) mRNA, complete cds Length = 1086 Score = 69.9 bits (35), Expect = 2e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 250 ggtgacaaaattatcatgccaccttcggcacttgatcgtcttgcgtctctgcatattga 308 |||||||||||||||||||| ||||| || || ||||||||||| ||| |||||||||| Sbjct: 184 ggtgacaaaattatcatgcctccttccgctctcgatcgtcttgcttctttgcatattga 242 Score = 54.0 bits (27), Expect = 0.001 Identities = 60/71 (84%) Strand = Plus / Plus Query: 355 tcacactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactgg 414 ||||| |||||||| ||||| |||| |||||| |||||| | | ||| ||||||| ||| Sbjct: 289 tcacattgtggtgtactagaattcactgcagacgaaggcctagtttacttgccatattgg 348 Query: 415 atgatgcaaaa 425 ||||||||||| Sbjct: 349 atgatgcaaaa 359
>gb|BT012260.1| Arabidopsis thaliana At2g29070 gene, complete cds Length = 939 Score = 69.9 bits (35), Expect = 2e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 250 ggtgacaaaattatcatgccaccttcggcacttgatcgtcttgcgtctctgcatattga 308 |||||||||||||||||||| ||||| || || ||||||||||| ||| |||||||||| Sbjct: 82 ggtgacaaaattatcatgcctccttccgctctcgatcgtcttgcttctttgcatattga 140 Score = 54.0 bits (27), Expect = 0.001 Identities = 60/71 (84%) Strand = Plus / Plus Query: 355 tcacactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactgg 414 ||||| |||||||| ||||| |||| |||||| |||||| | | ||| ||||||| ||| Sbjct: 187 tcacattgtggtgtactagaattcactgcagacgaaggcctagtttacttgccatattgg 246 Query: 415 atgatgcaaaa 425 ||||||||||| Sbjct: 247 atgatgcaaaa 257
>gb|BT011682.1| Arabidopsis thaliana At2g29070 gene, complete cds Length = 1145 Score = 69.9 bits (35), Expect = 2e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 250 ggtgacaaaattatcatgccaccttcggcacttgatcgtcttgcgtctctgcatattga 308 |||||||||||||||||||| ||||| || || ||||||||||| ||| |||||||||| Sbjct: 164 ggtgacaaaattatcatgcctccttccgctctcgatcgtcttgcttctttgcatattga 222 Score = 54.0 bits (27), Expect = 0.001 Identities = 60/71 (84%) Strand = Plus / Plus Query: 355 tcacactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactgg 414 ||||| |||||||| ||||| |||| |||||| |||||| | | ||| ||||||| ||| Sbjct: 269 tcacattgtggtgtactagaattcactgcagacgaaggcctagtttacttgccatattgg 328 Query: 415 atgatgcaaaa 425 ||||||||||| Sbjct: 329 atgatgcaaaa 339
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 69.9 bits (35), Expect = 2e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 478 aagggcacatatgtgaagctgcagcctcatacaactgacttcttggacatttcaaatcc 536 ||||| |||||||| ||| |||||||||| ||||||||||| |||||||| |||||||| Sbjct: 29064078 aagggtacatatgtcaagttgcagcctcacacaactgactttttggacatctcaaatcc 29064136 Score = 50.1 bits (25), Expect = 0.021 Identities = 52/61 (85%) Strand = Plus / Plus Query: 354 ttcacactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactg 413 ||||||||||||||| || || || | |||||||||||||||||| |||||| ||||| Sbjct: 29063854 ttcacactgtggtgtgctggaatttgtggcagaagaaggcatgatcatcatgccctactg 29063913 Query: 414 g 414 | Sbjct: 29063914 g 29063914
>emb|AL606639.3|OSJN00072 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020J04, complete sequence Length = 164567 Score = 69.9 bits (35), Expect = 2e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 478 aagggcacatatgtgaagctgcagcctcatacaactgacttcttggacatttcaaatcc 536 ||||| |||||||| ||| |||||||||| ||||||||||| |||||||| |||||||| Sbjct: 130732 aagggtacatatgtcaagttgcagcctcacacaactgactttttggacatctcaaatcc 130790 Score = 50.1 bits (25), Expect = 0.021 Identities = 52/61 (85%) Strand = Plus / Plus Query: 354 ttcacactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactg 413 ||||||||||||||| || || || | |||||||||||||||||| |||||| ||||| Sbjct: 130508 ttcacactgtggtgtgctggaatttgtggcagaagaaggcatgatcatcatgccctactg 130567 Query: 414 g 414 | Sbjct: 130568 g 130568
>gb|DQ235202.1| Solanum tuberosum clone 171H05 ubiquitin fusion-degradation protein-like mRNA, complete cds Length = 1238 Score = 67.9 bits (34), Expect = 9e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 373 gagttcattgcagaagaaggcatgatctacatgccatactggatgatgcaaaat 426 ||||||||||||||||| |||||||| || |||||||| ||||||||| ||||| Sbjct: 293 gagttcattgcagaagagggcatgatatatatgccatattggatgatggaaaat 346 Score = 63.9 bits (32), Expect = 1e-06 Identities = 119/148 (80%) Strand = Plus / Plus Query: 578 taaccactggtgacagcattatggtggcatataataacaagaagtactacattgatatag 637 ||||||| || || ||||| |||||||| || ||||| || || || || || || || | Sbjct: 498 taaccacaggagatagcatcatggtggcttacaataataaaaaatattatatagacattg 557 Query: 638 ttgaaacaaagccttccagtgctataagtataattgagactgattgtgaggttgacttcg 697 | ||||| || ||||| | ||| |||||||| |||||||| |||||||| || ||||| | Sbjct: 558 tggaaaccaaaccttctaatgcaataagtattattgagaccgattgtgaagtagactttg 617 Query: 698 ccccaccacttgactataaagaacctga 725 | || |||||||| || ||||||||||| Sbjct: 618 ctcctccacttgattacaaagaacctga 645 Score = 58.0 bits (29), Expect = 9e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 214 cctgcatcttttattgacaagccacagcttgaatctggtgacaaaattatcatgccacct 273 |||||||| || |||||||||||||| || ||| ||| ||||||||||| ||||| || Sbjct: 134 cctgcatcattcattgacaagccacaactagaaaatggagacaaaattataatgcctccc 193 Query: 274 tcggcacttgatcgtct 290 || || ||||||||||| Sbjct: 194 tctgcccttgatcgtct 210
>ref|NM_128464.2| Arabidopsis thaliana unknown protein (AT2G29070) mRNA, complete cds Length = 1169 Score = 54.0 bits (27), Expect = 0.001 Identities = 60/71 (84%) Strand = Plus / Plus Query: 355 tcacactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactgg 414 ||||| |||||||| ||||| |||| |||||| |||||| | | ||| ||||||| ||| Sbjct: 372 tcacattgtggtgtactagaattcactgcagacgaaggcctagtttacttgccatattgg 431 Query: 415 atgatgcaaaa 425 ||||||||||| Sbjct: 432 atgatgcaaaa 442 Score = 50.1 bits (25), Expect = 0.021 Identities = 43/49 (87%) Strand = Plus / Plus Query: 260 ttatcatgccaccttcggcacttgatcgtcttgcgtctctgcatattga 308 |||||||||| ||||| || || ||||||||||| ||| |||||||||| Sbjct: 277 ttatcatgcctccttccgctctcgatcgtcttgcttctttgcatattga 325
>emb|BX062595.1|CNS09KGN Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC43DG09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1023 Score = 50.1 bits (25), Expect = 0.021 Identities = 37/41 (90%) Strand = Plus / Minus Query: 388 gaaggcatgatctacatgccatactggatgatgcaaaatct 428 ||||||| ||||||||||| |||||||||||||| ||||| Sbjct: 778 gaaggcaaaatctacatgccctactggatgatgcacaatct 738
>emb|BX062594.1|CNS09KGM Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC43DG09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1016 Score = 50.1 bits (25), Expect = 0.021 Identities = 37/41 (90%) Strand = Plus / Plus Query: 388 gaaggcatgatctacatgccatactggatgatgcaaaatct 428 ||||||| ||||||||||| |||||||||||||| ||||| Sbjct: 347 gaaggcaaaatctacatgccctactggatgatgcacaatct 387
>emb|AL161594.2|ATCHRIV90 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 90 Length = 198987 Score = 50.1 bits (25), Expect = 0.021 Identities = 49/57 (85%) Strand = Plus / Plus Query: 358 cactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactgg 414 ||||| || ||||| |||||||| |||||||||||| |||| ||||| || |||||| Sbjct: 64664 cactgcggagtccttgagttcatcgcagaagaaggcgtgatttacattccctactgg 64720 Score = 46.1 bits (23), Expect = 0.33 Identities = 86/107 (80%) Strand = Plus / Plus Query: 592 agcattatggtggcatataataacaagaagtactacattgatatagttgaaacaaagcct 651 ||||||||||| |||| || || ||||| |||| ||| || ||||| || |||||||| Sbjct: 65094 agcattatggtcccatacaacaataagaaatacttcatagacatagtggaggcaaagcct 65153 Query: 652 tccagtgctataagtataattgagactgattgtgaggttgacttcgc 698 || | || ||| || || ||||| |||||||| |||||||| ||||| Sbjct: 65154 tctaatggtattagcatcattgaaactgattgcgaggttgatttcgc 65200
>emb|AL035679.1|ATF19H22 Arabidopsis thaliana DNA chromosome 4, BAC clone F19H22 (ESSA project) Length = 100469 Score = 50.1 bits (25), Expect = 0.021 Identities = 49/57 (85%) Strand = Plus / Plus Query: 358 cactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactgg 414 ||||| || ||||| |||||||| |||||||||||| |||| ||||| || |||||| Sbjct: 26654 cactgcggagtccttgagttcatcgcagaagaaggcgtgatttacattccctactgg 26710 Score = 46.1 bits (23), Expect = 0.33 Identities = 86/107 (80%) Strand = Plus / Plus Query: 592 agcattatggtggcatataataacaagaagtactacattgatatagttgaaacaaagcct 651 ||||||||||| |||| || || ||||| |||| ||| || ||||| || |||||||| Sbjct: 27084 agcattatggtcccatacaacaataagaaatacttcatagacatagtggaggcaaagcct 27143 Query: 652 tccagtgctataagtataattgagactgattgtgaggttgacttcgc 698 || | || ||| || || ||||| |||||||| |||||||| ||||| Sbjct: 27144 tctaatggtattagcatcattgaaactgattgcgaggttgatttcgc 27190
>gb|AY220759.1| Homo sapiens B-cell CLL/lymphoma 2 (BCL2) gene, complete cds Length = 198051 Score = 48.1 bits (24), Expect = 0.084 Identities = 24/24 (100%) Strand = Plus / Plus Query: 988 cagtcatcaaaaggaacagaaaag 1011 |||||||||||||||||||||||| Sbjct: 184380 cagtcatcaaaaggaacagaaaag 184403
>ref|XM_321840.2| Anopheles gambiae str. PEST ENSANGP00000020956 (ENSANGG00000018467), partial mRNA Length = 927 Score = 48.1 bits (24), Expect = 0.084 Identities = 30/32 (93%) Strand = Plus / Plus Query: 397 atctacatgccatactggatgatgcaaaatct 428 ||||||||||| |||||||||||||| ||||| Sbjct: 265 atctacatgccctactggatgatgcacaatct 296
>gb|AC022726.13| Homo sapiens chromosome 18, clone RP11-299P2, complete sequence Length = 146688 Score = 48.1 bits (24), Expect = 0.084 Identities = 24/24 (100%) Strand = Plus / Plus Query: 988 cagtcatcaaaaggaacagaaaag 1011 |||||||||||||||||||||||| Sbjct: 120479 cagtcatcaaaaggaacagaaaag 120502
>dbj|AK124975.1| Homo sapiens cDNA FLJ42985 fis, clone BRTHA2008513, weakly similar to Homo sapiens UDP-galactose transporter related (UGTREL1) Length = 2485 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Minus Query: 905 ttcagccatcagcagcctccacc 927 ||||||||||||||||||||||| Sbjct: 354 ttcagccatcagcagcctccacc 332
>gb|AC015795.20| Homo sapiens chromosome 17, clone RP11-613C6, complete sequence Length = 170862 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Plus Query: 905 ttcagccatcagcagcctccacc 927 ||||||||||||||||||||||| Sbjct: 50169 ttcagccatcagcagcctccacc 50191
>emb|AL592285.7| Human DNA sequence from clone RP11-153I22 on chromosome 1 Contains part of the PDE4B gene for phosphodiesterase 4B, cAMP-specific (phosphodiesterase E4 dunce homolog, Drosophila), complete sequence Length = 152113 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1196 cccttttgggagctggggcatct 1218 ||||||||||||||||||||||| Sbjct: 9913 cccttttgggagctggggcatct 9935
>dbj|AK148193.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370046G24 product:transient receptor potential cation channel, subfamily M, member 1, full insert sequence Length = 5535 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 398 tctacatgccatactggatgat 419 |||||||||||||||||||||| Sbjct: 3182 tctacatgccatactggatgat 3203
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 412 tggatgatgcaaaatcttcttttgca 437 |||||||| ||||||||||||||||| Sbjct: 2773883 tggatgattcaaaatcttcttttgca 2773908
>emb|AL355352.16| Human DNA sequence from clone RP11-67K21 on chromosome 6, complete sequence Length = 169747 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 587 gtgacagcattatggtggcata 608 |||||||||||||||||||||| Sbjct: 102762 gtgacagcattatggtggcata 102783
>emb|AL356477.12| Human DNA sequence from clone RP11-470P23 on chromosome 10, complete sequence Length = 29021 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 138 cttcctgtccatgaatatgtat 159 |||||||||||||||||||||| Sbjct: 10985 cttcctgtccatgaatatgtat 10964
>gb|AC139849.5| Mus musculus BAC clone RP23-84M17 from chromosome 7, complete sequence Length = 189942 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 398 tctacatgccatactggatgat 419 |||||||||||||||||||||| Sbjct: 62084 tctacatgccatactggatgat 62105
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Plus Query: 277 gcacttgatcgtcttgcgtctctgcatatt 306 ||||||||||||| ||||| |||||||||| Sbjct: 458665 gcacttgatcgtcctgcgtttctgcatatt 458694
>ref|NM_018752.2| Mus musculus transient receptor potential cation channel, subfamily M, member 1 (Trpm1), transcript variant 1, mRNA gb|AY180104.1| Mus musculus transient receptor potential cation channel subfamily M member 1 long form (Trpm1) mRNA, complete cds Length = 5291 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 398 tctacatgccatactggatgat 419 |||||||||||||||||||||| Sbjct: 2920 tctacatgccatactggatgat 2941
>emb|CR387931.9| Zebrafish DNA sequence from clone CH211-169D8 in linkage group 23, complete sequence Length = 144701 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1288 tgatttgtaaaaagtatttta 1308 ||||||||||||||||||||| Sbjct: 71452 tgatttgtaaaaagtatttta 71472
>gb|AC186203.4| Canis Familiaris chromosome 26, clone XX-299G16, complete sequence Length = 181395 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 140 tcctgtccatgaatatgtatt 160 ||||||||||||||||||||| Sbjct: 61561 tcctgtccatgaatatgtatt 61581
>gb|AC141323.9| Medicago truncatula clone mth2-6a23, complete sequence Length = 132894 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 acaaaattatcatgccacctt 274 ||||||||||||||||||||| Sbjct: 12845 acaaaattatcatgccacctt 12865
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 755 ctgatcctgctgcagaggctc 775 ||||||||||||||||||||| Sbjct: 529599 ctgatcctgctgcagaggctc 529619
>ref|NM_122218.2| Arabidopsis thaliana HCF136 (HCF136) mRNA, complete cds Length = 1410 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 442 ggagatatggtgtttataaaa 462 ||||||||||||||||||||| Sbjct: 592 ggagatatggtgtttataaaa 612
>dbj|AK052751.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched library, clone:D630042J06 product:unclassifiable, full insert sequence Length = 3586 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1290 atttgtaaaaagtattttaat 1310 ||||||||||||||||||||| Sbjct: 3304 atttgtaaaaagtattttaat 3284
>gb|AY045691.1| Arabidopsis thaliana AT5g23120/MYJ24_11 mRNA, complete cds Length = 1386 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 442 ggagatatggtgtttataaaa 462 ||||||||||||||||||||| Sbjct: 590 ggagatatggtgtttataaaa 610
>emb|AJ427336.1|BOL427336 Brassica oleracea mRNA for kinase-associated protein phosphatase (kapp gene) Length = 1895 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 857 cgtcatcctcttcgcctgcaa 877 ||||||||||||||||||||| Sbjct: 137 cgtcatcctcttcgcctgcaa 157
>emb|AL606522.6| Mouse DNA sequence from clone RP23-19L22 on chromosome 11 Contains the Actr2 gene for ARP2 actin-related protein 2 homolog (yeast), a small nuclear ribonucleoprotein polypeptide G (Snrpg) pseudogene, two novel genes, the Rab1 gene for RAB1, member RAS oncogene family and three CpG islands, complete sequence Length = 203071 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1290 atttgtaaaaagtattttaat 1310 ||||||||||||||||||||| Sbjct: 168466 atttgtaaaaagtattttaat 168446
>gb|AC149805.12| Medicago truncatula clone mth2-146o17, complete sequence Length = 89758 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 acaaaattatcatgccacctt 274 ||||||||||||||||||||| Sbjct: 44994 acaaaattatcatgccacctt 45014
>gb|BT004549.1| Arabidopsis thaliana At5g23120/MYJ24_11 gene, complete cds Length = 1212 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 442 ggagatatggtgtttataaaa 462 ||||||||||||||||||||| Sbjct: 559 ggagatatggtgtttataaaa 579
>gb|AC084073.22| Mus musculus strain C57BL/6J chromosome 1 clone rp23-85a8, complete sequence Length = 236834 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1202 tgggagctggggcatcttttg 1222 ||||||||||||||||||||| Sbjct: 19999 tgggagctggggcatcttttg 19979
>gb|AC087781.17| Mus musculus strain C57BL/6J chromosome 1 clone rp23-370c6, complete sequence Length = 173335 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1202 tgggagctggggcatcttttg 1222 ||||||||||||||||||||| Sbjct: 23422 tgggagctggggcatcttttg 23442
>gb|AC174163.2| Gallus gallus BAC clone CH261-69O1 from chromosome ul, complete sequence Length = 178322 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 603 ggcatataataacaagaagta 623 ||||||||||||||||||||| Sbjct: 105034 ggcatataataacaagaagta 105054
>emb|BX830635.1|CNS0A01H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB95ZC08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1343 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 442 ggagatatggtgtttataaaa 462 ||||||||||||||||||||| Sbjct: 588 ggagatatggtgtttataaaa 608
>emb|Y15628.1|ATHCF136 Arabidopsis thaliana mRNA for nuclear protein HCF136 Length = 1404 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 442 ggagatatggtgtttataaaa 462 ||||||||||||||||||||| Sbjct: 588 ggagatatggtgtttataaaa 608
>emb|X15745.1|MMYPT12 Mouse ypt1 gene for ras-related GTP-binding protein, exon 2 Length = 900 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1290 atttgtaaaaagtattttaat 1310 ||||||||||||||||||||| Sbjct: 263 atttgtaaaaagtattttaat 243
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 907 cagccatcagcagcctccacc 927 ||||||||||||||||||||| Sbjct: 819443 cagccatcagcagcctccacc 819423 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 255,851,054 Number of extensions: 13739580 Number of successful extensions: 262296 Number of sequences better than 10.0: 74 Number of HSP's gapped: 262280 Number of HSP's successfully gapped: 152 Length of query: 1359 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1336 Effective length of database: 18,503,978,556 Effective search space: 24721315350816 Effective search space used: 24721315350816 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
