ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf143b04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK243025.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100002B09, full insert sequence Length = 1182 Score = 174 bits (88), Expect = 6e-40 Identities = 253/308 (82%) Strand = Plus / Plus Query: 960 agaccagccaaggttgtgaggcatggtgaaatatctgcgccttgcgcggcgatggtgctt 1019 ||||| |||||| |||| ||| ||||||| || ||||| || |||| || ||||| || Sbjct: 584 agacctgccaagattgtaagggatggtgagatgtctgcaccatgcggcgcaatggttatt 643 Query: 1020 cgtccaacagatggtgggaatgtccatgccctgaaagccatcactccctgtgctatcttg 1079 | |||| |||||| ||||| ||||||| | ||||||||||| |||||||||||| || Sbjct: 644 caaccaaaagatggggggaacatccatgctttcaaagccatcaccccctgtgctatcctg 703 Query: 1080 gacatcttgtcgcctccttactcatcaaaggatgggcggcattgctcctacttccggaga 1139 |||||||| || |||||||| || ||| | ||||| ||||||||||||||||||| ||| Sbjct: 704 gacatcttatcacctccttattcttcagaagatggaaggcattgctcctacttccgcaga 763 Query: 1140 cgcccaaaatcagaccagtcaggcattttatgggaccgaacaagggagtctgaatttgtc 1199 ||| |||| |||||| ||| |||||||||| ||||| | ||||| |||||||||| Sbjct: 764 tgccgaaaagcagacccgtcgggcattttatcaaaccgatcgagggaacctgaatttgtt 823 Query: 1200 ttgctggaagaataccagccccgtgacaattttgttattagaagagacctgtacacagga 1259 | |||||||||| ||||||||| | ||| |||||||||||||| |||||||||| |||| Sbjct: 824 tggctggaagaacaccagccccctaacagctttgttattagaagggacctgtacaaagga 883 Query: 1260 cctacttt 1267 ||| |||| Sbjct: 884 cctgcttt 891 Score = 168 bits (85), Expect = 4e-38 Identities = 205/245 (83%) Strand = Plus / Plus Query: 247 ccttctgatgttggacttgagtgtgaagctcaagctgttcgtgtttggagaagaccacga 306 ||||||||||||||||||||| |||||| ||| |||| || ||||||||| |||||| Sbjct: 293 ccttctgatgttggacttgagactgaagcacaatctgtacgctcttggagaagtccacga 352 Query: 307 gccttgagtaggaaaacagtgctccattcaagcccagcgatcagatatcgtcatatatat 366 | ||| ||||||| | || | ||||| ||| | | |||||||||||||| |||||| Sbjct: 353 gttctgaataggaaagcggtttttcattcgagcaccacaatcagatatcgtcacatatat 412 Query: 367 gagtgcaaaagcttctctattggaatatactgcataccagcatcatccatcattccactg 426 |||||||||| ||||| |||||||||| || || ||||||||||||||||||||||| Sbjct: 413 gagtgcaaaaatttctcgattggaatattttgtattccagcatcatccatcattccactc 472 Query: 427 cacaaccatccaggcatgactgtcctcagcaaacttctctatggtaaagtgcatgtcaaa 486 ||||||||||||||||||||||| |||| |||||||| ||||||| |||||||| ||| Sbjct: 473 cacaaccatccaggcatgactgtattcagtaaacttctatatggtaccgtgcatgttaaa 532 Query: 487 gcgta 491 |||| Sbjct: 533 tcgta 537 Score = 63.9 bits (32), Expect = 2e-06 Identities = 68/80 (85%) Strand = Plus / Plus Query: 136 atggctgcaattcagaagctttatgaggtctgcaaagtatcattatttgaaaaagggcca 195 |||||| |||| || ||||| ||||||||||||||||| ||||||| || ||| ||| | Sbjct: 179 atggctacaatacaaaagctctatgaggtctgcaaagtgtcattatctgcaaatgggtcg 238 Query: 196 tcatctcctgaagccgttga 215 | |||||||||||| ||||| Sbjct: 239 ttatctcctgaagctgttga 258
>ref|NM_001069384.1| Oryza sativa (japonica cultivar-group) Os09g0316000 (Os09g0316000) mRNA, complete cds Length = 537 Score = 174 bits (88), Expect = 6e-40 Identities = 253/308 (82%) Strand = Plus / Plus Query: 960 agaccagccaaggttgtgaggcatggtgaaatatctgcgccttgcgcggcgatggtgctt 1019 ||||| |||||| |||| ||| ||||||| || ||||| || |||| || ||||| || Sbjct: 220 agacctgccaagattgtaagggatggtgagatgtctgcaccatgcggcgcaatggttatt 279 Query: 1020 cgtccaacagatggtgggaatgtccatgccctgaaagccatcactccctgtgctatcttg 1079 | |||| |||||| ||||| ||||||| | ||||||||||| |||||||||||| || Sbjct: 280 caaccaaaagatggggggaacatccatgctttcaaagccatcaccccctgtgctatcctg 339 Query: 1080 gacatcttgtcgcctccttactcatcaaaggatgggcggcattgctcctacttccggaga 1139 |||||||| || |||||||| || ||| | ||||| ||||||||||||||||||| ||| Sbjct: 340 gacatcttatcacctccttattcttcagaagatggaaggcattgctcctacttccgcaga 399 Query: 1140 cgcccaaaatcagaccagtcaggcattttatgggaccgaacaagggagtctgaatttgtc 1199 ||| |||| |||||| ||| |||||||||| ||||| | ||||| |||||||||| Sbjct: 400 tgccgaaaagcagacccgtcgggcattttatcaaaccgatcgagggaacctgaatttgtt 459 Query: 1200 ttgctggaagaataccagccccgtgacaattttgttattagaagagacctgtacacagga 1259 | |||||||||| ||||||||| | ||| |||||||||||||| |||||||||| |||| Sbjct: 460 tggctggaagaacaccagccccctaacagctttgttattagaagggacctgtacaaagga 519 Query: 1260 cctacttt 1267 ||| |||| Sbjct: 520 cctgcttt 527 Score = 115 bits (58), Expect = 5e-22 Identities = 97/110 (88%) Strand = Plus / Plus Query: 382 tctattggaatatactgcataccagcatcatccatcattccactgcacaaccatccaggc 441 ||||||||||||| || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 64 tctattggaatattttgtattccagcatcatccatcattccactccacaaccatccaggc 123 Query: 442 atgactgtcctcagcaaacttctctatggtaaagtgcatgtcaaagcgta 491 |||||||| |||| |||||||| ||||||| |||||||| ||| |||| Sbjct: 124 atgactgtattcagtaaacttctatatggtaccgtgcatgttaaatcgta 173 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 247 ccttctgatgttggacttgag 267 ||||||||||||||||||||| Sbjct: 31 ccttctgatgttggacttgag 51
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 109 bits (55), Expect = 3e-20 Identities = 94/107 (87%) Strand = Plus / Minus Query: 385 attggaatatactgcataccagcatcatccatcattccactgcacaaccatccaggcatg 444 |||||||||| || || ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 8673768 attggaatattttgtattccagcatcatccatcattccactccacaaccatccaggcatg 8673709 Query: 445 actgtcctcagcaaacttctctatggtaaagtgcatgtcaaagcgta 491 ||||| |||| |||||||| ||||||| |||||||| ||| |||| Sbjct: 8673708 actgtattcagtaaacttctatatggtaccgtgcatgttaaatcgta 8673662 Score = 107 bits (54), Expect = 1e-19 Identities = 165/202 (81%) Strand = Plus / Minus Query: 954 gcagtcagaccagccaaggttgtgaggcatggtgaaatatctgcgccttgcgcggcgatg 1013 ||||| ||||| |||||| |||| ||| ||||||| || ||||| || |||| || ||| Sbjct: 8673269 gcagttagacctgccaagattgtaagggatggtgagatgtctgcaccatgcggcgcaatg 8673210 Query: 1014 gtgcttcgtccaacagatggtgggaatgtccatgccctgaaagccatcactccctgtgct 1073 || ||| |||| |||||| ||||| ||||||| | ||||||||||| ||||||||| Sbjct: 8673209 gttattcaaccaaaagatggggggaacatccatgctttcaaagccatcaccccctgtgct 8673150 Query: 1074 atcttggacatcttgtcgcctccttactcatcaaaggatgggcggcattgctcctacttc 1133 ||| |||||||||| || |||||||| || ||| | ||||| ||||||||||||||||| Sbjct: 8673149 atcctggacatcttatcacctccttattcttcagaagatggaaggcattgctcctacttc 8673090 Query: 1134 cggagacgcccaaaatcagacc 1155 || ||| ||| |||| |||||| Sbjct: 8673089 cgcagatgccgaaaagcagacc 8673068 Score = 81.8 bits (41), Expect = 7e-12 Identities = 92/109 (84%) Strand = Plus / Minus Query: 1159 caggcattttatgggaccgaacaagggagtctgaatttgtcttgctggaagaataccagc 1218 |||||||||||| ||||| | ||||| |||||||||| | |||||||||| |||||| Sbjct: 8672973 caggcattttatcaaaccgatcgagggaacctgaatttgtttggctggaagaacaccagc 8672914 Query: 1219 cccgtgacaattttgttattagaagagacctgtacacaggacctacttt 1267 ||| | ||| |||||||||||||| |||||||||| ||||||| |||| Sbjct: 8672913 cccctaacagctttgttattagaagggacctgtacaaaggacctgcttt 8672865 Score = 67.9 bits (34), Expect = 1e-07 Identities = 106/130 (81%) Strand = Plus / Minus Query: 247 ccttctgatgttggacttgagtgtgaagctcaagctgttcgtgtttggagaagaccacga 306 ||||||||||||||||||||| |||||| ||| |||| || ||||||||| |||||| Sbjct: 8674095 ccttctgatgttggacttgagactgaagcacaatctgtacgctcttggagaagtccacga 8674036 Query: 307 gccttgagtaggaaaacagtgctccattcaagcccagcgatcagatatcgtcatatatat 366 | ||| ||||||| | || | ||||| ||| | | |||||||||||||| |||||| Sbjct: 8674035 gttctgaataggaaagcggtttttcattcgagcaccacaatcagatatcgtcacatatat 8673976 Query: 367 gagtgcaaaa 376 |||||||||| Sbjct: 8673975 gagtgcaaaa 8673966 Score = 63.9 bits (32), Expect = 2e-06 Identities = 68/80 (85%) Strand = Plus / Minus Query: 136 atggctgcaattcagaagctttatgaggtctgcaaagtatcattatttgaaaaagggcca 195 |||||| |||| || ||||| ||||||||||||||||| ||||||| || ||| ||| | Sbjct: 8674746 atggctacaatacaaaagctctatgaggtctgcaaagtgtcattatctgcaaatgggtcg 8674687 Query: 196 tcatctcctgaagccgttga 215 | |||||||||||| ||||| Sbjct: 8674686 ttatctcctgaagctgttga 8674667
>dbj|AP005802.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0057D11 Length = 190790 Score = 109 bits (55), Expect = 3e-20 Identities = 94/107 (87%) Strand = Plus / Minus Query: 385 attggaatatactgcataccagcatcatccatcattccactgcacaaccatccaggcatg 444 |||||||||| || || ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 103564 attggaatattttgtattccagcatcatccatcattccactccacaaccatccaggcatg 103505 Query: 445 actgtcctcagcaaacttctctatggtaaagtgcatgtcaaagcgta 491 ||||| |||| |||||||| ||||||| |||||||| ||| |||| Sbjct: 103504 actgtattcagtaaacttctatatggtaccgtgcatgttaaatcgta 103458 Score = 107 bits (54), Expect = 1e-19 Identities = 165/202 (81%) Strand = Plus / Minus Query: 954 gcagtcagaccagccaaggttgtgaggcatggtgaaatatctgcgccttgcgcggcgatg 1013 ||||| ||||| |||||| |||| ||| ||||||| || ||||| || |||| || ||| Sbjct: 103065 gcagttagacctgccaagattgtaagggatggtgagatgtctgcaccatgcggcgcaatg 103006 Query: 1014 gtgcttcgtccaacagatggtgggaatgtccatgccctgaaagccatcactccctgtgct 1073 || ||| |||| |||||| ||||| ||||||| | ||||||||||| ||||||||| Sbjct: 103005 gttattcaaccaaaagatggggggaacatccatgctttcaaagccatcaccccctgtgct 102946 Query: 1074 atcttggacatcttgtcgcctccttactcatcaaaggatgggcggcattgctcctacttc 1133 ||| |||||||||| || |||||||| || ||| | ||||| ||||||||||||||||| Sbjct: 102945 atcctggacatcttatcacctccttattcttcagaagatggaaggcattgctcctacttc 102886 Query: 1134 cggagacgcccaaaatcagacc 1155 || ||| ||| |||| |||||| Sbjct: 102885 cgcagatgccgaaaagcagacc 102864 Score = 81.8 bits (41), Expect = 7e-12 Identities = 92/109 (84%) Strand = Plus / Minus Query: 1159 caggcattttatgggaccgaacaagggagtctgaatttgtcttgctggaagaataccagc 1218 |||||||||||| ||||| | ||||| |||||||||| | |||||||||| |||||| Sbjct: 102769 caggcattttatcaaaccgatcgagggaacctgaatttgtttggctggaagaacaccagc 102710 Query: 1219 cccgtgacaattttgttattagaagagacctgtacacaggacctacttt 1267 ||| | ||| |||||||||||||| |||||||||| ||||||| |||| Sbjct: 102709 cccctaacagctttgttattagaagggacctgtacaaaggacctgcttt 102661 Score = 67.9 bits (34), Expect = 1e-07 Identities = 106/130 (81%) Strand = Plus / Minus Query: 247 ccttctgatgttggacttgagtgtgaagctcaagctgttcgtgtttggagaagaccacga 306 ||||||||||||||||||||| |||||| ||| |||| || ||||||||| |||||| Sbjct: 103891 ccttctgatgttggacttgagactgaagcacaatctgtacgctcttggagaagtccacga 103832 Query: 307 gccttgagtaggaaaacagtgctccattcaagcccagcgatcagatatcgtcatatatat 366 | ||| ||||||| | || | ||||| ||| | | |||||||||||||| |||||| Sbjct: 103831 gttctgaataggaaagcggtttttcattcgagcaccacaatcagatatcgtcacatatat 103772 Query: 367 gagtgcaaaa 376 |||||||||| Sbjct: 103771 gagtgcaaaa 103762 Score = 63.9 bits (32), Expect = 2e-06 Identities = 68/80 (85%) Strand = Plus / Minus Query: 136 atggctgcaattcagaagctttatgaggtctgcaaagtatcattatttgaaaaagggcca 195 |||||| |||| || ||||| ||||||||||||||||| ||||||| || ||| ||| | Sbjct: 104542 atggctacaatacaaaagctctatgaggtctgcaaagtgtcattatctgcaaatgggtcg 104483 Query: 196 tcatctcctgaagccgttga 215 | |||||||||||| ||||| Sbjct: 104482 ttatctcctgaagctgttga 104463
>emb|CT573250.8| Zebrafish DNA sequence from clone DKEY-229F21 in linkage group 24, complete sequence Length = 168300 Score = 50.1 bits (25), Expect = 0.024 Identities = 25/25 (100%) Strand = Plus / Minus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||||||||||| Sbjct: 23782 ttatttattaatttattaacttatt 23758
>emb|CR853298.11| Zebrafish DNA sequence from clone CH211-277B24 in linkage group 24, complete sequence Length = 152604 Score = 50.1 bits (25), Expect = 0.024 Identities = 25/25 (100%) Strand = Plus / Plus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||||||||||| Sbjct: 123435 ttatttattaatttattaacttatt 123459
>gb|AC137822.30| Medicago truncatula clone mth2-31e20, complete sequence Length = 140561 Score = 50.1 bits (25), Expect = 0.024 Identities = 43/49 (87%) Strand = Plus / Plus Query: 416 tcattccactgcacaaccatccaggcatgactgtcctcagcaaacttct 464 ||||||| || || ||||| |||||||||||||| ||||||||||||| Sbjct: 116616 tcattcccctccataaccacccaggcatgactgttttcagcaaacttct 116664
>gb|AC148965.3| Medicago truncatula chromosome 7 BAC clone mth2-10f21, complete sequence Length = 97477 Score = 50.1 bits (25), Expect = 0.024 Identities = 43/49 (87%) Strand = Plus / Plus Query: 416 tcattccactgcacaaccatccaggcatgactgtcctcagcaaacttct 464 ||||||| || || ||||| |||||||||||||| ||||||||||||| Sbjct: 16749 tcattcccctccataaccacccaggcatgactgttttcagcaaacttct 16797
>emb|AL928628.9| Zebrafish DNA sequence from clone DKEY-5G18 in linkage group 7, complete sequence Length = 229942 Score = 50.1 bits (25), Expect = 0.024 Identities = 25/25 (100%) Strand = Plus / Plus Query: 98 tttattaacttattaacttatataa 122 ||||||||||||||||||||||||| Sbjct: 50140 tttattaacttattaacttatataa 50164
>gb|AC136501.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0044M15, complete sequence Length = 144568 Score = 48.1 bits (24), Expect = 0.097 Identities = 24/24 (100%) Strand = Plus / Minus Query: 100 tattaacttattaacttatataag 123 |||||||||||||||||||||||| Sbjct: 32015 tattaacttattaacttatataag 31992
>gb|AC119810.8| Mus musculus chromosome 7, clone RP23-54G21, complete sequence Length = 185939 Score = 48.1 bits (24), Expect = 0.097 Identities = 33/36 (91%) Strand = Plus / Minus Query: 88 tatttattaatttattaacttattaacttatataag 123 |||||||| ||||||| ||||||| ||||||||||| Sbjct: 37372 tatttatttatttatttacttatttacttatataag 37337
>gb|AE014839.1| Plasmodium falciparum 3D7 chromosome 11 section 4 of 8 of the complete sequence Length = 250029 Score = 48.1 bits (24), Expect = 0.097 Identities = 27/28 (96%) Strand = Plus / Plus Query: 85 acttatttattaatttattaacttatta 112 ||||||||||||||||||||| |||||| Sbjct: 116877 acttatttattaatttattaaattatta 116904
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 48.1 bits (24), Expect = 0.097 Identities = 24/24 (100%) Strand = Plus / Plus Query: 100 tattaacttattaacttatataag 123 |||||||||||||||||||||||| Sbjct: 10785458 tattaacttattaacttatataag 10785481
>emb|AL929353.1|PFA929353 Plasmodium falciparum strain 3D7, chromosome 5, segment 3/4 Length = 343050 Score = 48.1 bits (24), Expect = 0.097 Identities = 30/32 (93%) Strand = Plus / Minus Query: 87 ttatttattaatttattaacttattaacttat 118 ||||||||||||||||||| ||||||| |||| Sbjct: 75651 ttatttattaatttattaatttattaatttat 75620
>emb|BX323881.7| Zebrafish DNA sequence from clone CH211-274G13 in linkage group 14, complete sequence Length = 157039 Score = 48.1 bits (24), Expect = 0.097 Identities = 30/32 (93%) Strand = Plus / Minus Query: 87 ttatttattaatttattaacttattaacttat 118 ||||||||||||||||||| ||||||| |||| Sbjct: 136747 ttatttattaatttattaatttattaatttat 136716
>gb|AE001407.1| Plasmodium falciparum 3D7 chromosome 2 section 44 of 73 of the complete sequence Length = 13437 Score = 46.1 bits (23), Expect = 0.38 Identities = 29/31 (93%) Strand = Plus / Minus Query: 88 tatttattaatttattaacttattaacttat 118 |||||||||||||||||| ||||||| |||| Sbjct: 3870 tatttattaatttattaatttattaatttat 3840
>gb|AC131326.9| Mus musculus chromosome 17, clone RP23-454P14, complete sequence Length = 177335 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1259 acctactttggagctgtgaactc 1281 ||||||||||||||||||||||| Sbjct: 133220 acctactttggagctgtgaactc 133198
>gb|AC122916.4| Mus musculus BAC clone RP23-28F1 from 5, complete sequence Length = 231319 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 94 ttaatttattaacttattaactt 116 ||||||||||||||||||||||| Sbjct: 18914 ttaatttattaacttattaactt 18892
>gb|AC122875.2| Mus musculus BAC clone RP23-113B22 from 5, complete sequence Length = 152406 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Plus Query: 94 ttaatttattaacttattaactt 116 ||||||||||||||||||||||| Sbjct: 7485 ttaatttattaacttattaactt 7507
>gb|AC026884.7| Homo sapiens chromosome 10 clone RP11-123G9, complete sequence Length = 142093 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1495 atatgtatatctaactatatata 1517 ||||||||||||||||||||||| Sbjct: 52852 atatgtatatctaactatatata 52874
>emb|AL139142.10| Human DNA sequence from clone RP3-436N22 on chromosome 1q24.1-25.3 Contains the PRDX6 gene for peroxiredoxin 6, gene MGC43026, a novel gene, the 3' end of a novel gene (FLJ45235) and two CpG islands, complete sequence Length = 159771 Score = 46.1 bits (23), Expect = 0.38 Identities = 26/27 (96%) Strand = Plus / Minus Query: 88 tatttattaatttattaacttattaac 114 ||||||||||||||||| ||||||||| Sbjct: 124635 tatttattaatttattagcttattaac 124609
>gb|AF203584.1|AF203584 Zornia sp. Lavin 5039 maturase (matK) gene, complete cds; chloroplast gene for chloroplast product Length = 2636 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Plus Query: 94 ttaatttattaacttattaactt 116 ||||||||||||||||||||||| Sbjct: 670 ttaatttattaacttattaactt 692
>gb|AC158333.1| Homo sapiens chromosome 2 clone WI2-3762I17, complete sequence Length = 41721 Score = 46.1 bits (23), Expect = 0.38 Identities = 26/27 (96%) Strand = Plus / Plus Query: 87 ttatttattaatttattaacttattaa 113 ||||||||||||||||||| ||||||| Sbjct: 33168 ttatttattaatttattaatttattaa 33194
>gb|AC092574.2| Homo sapiens BAC clone RP11-2H3 from 4, complete sequence Length = 144117 Score = 46.1 bits (23), Expect = 0.38 Identities = 26/27 (96%) Strand = Plus / Minus Query: 87 ttatttattaatttattaacttattaa 113 ||||||||||||||||||| ||||||| Sbjct: 85805 ttatttattaatttattaatttattaa 85779
>gb|AC092106.5| Homo sapiens BAC clone RP11-707E21 from 2, complete sequence Length = 76679 Score = 46.1 bits (23), Expect = 0.38 Identities = 26/27 (96%) Strand = Plus / Plus Query: 87 ttatttattaatttattaacttattaa 113 ||||||||||||||||||| ||||||| Sbjct: 74786 ttatttattaatttattaatttattaa 74812
>gb|AC114755.4| Homo sapiens BAC clone RP11-274P16 from 2, complete sequence Length = 195403 Score = 46.1 bits (23), Expect = 0.38 Identities = 26/27 (96%) Strand = Plus / Plus Query: 87 ttatttattaatttattaacttattaa 113 ||||||||||||||||||| ||||||| Sbjct: 15574 ttatttattaatttattaatttattaa 15600
>gb|AF044861.1| Eurema nicippe large subunit ribosomal RNA gene, partial sequence; tRNA-Val gene, complete sequence; and small subunit ribosomal RNA gene, partial sequence, mitochondrial genes for mitochondrial RNAs Length = 1163 Score = 46.1 bits (23), Expect = 0.38 Identities = 26/27 (96%) Strand = Plus / Plus Query: 90 tttattaatttattaacttattaactt 116 |||||||||||||||| |||||||||| Sbjct: 19 tttattaatttattaatttattaactt 45
>emb|BX120001.10| Zebrafish DNA sequence from clone CH211-217J8 in linkage group 16, complete sequence Length = 211279 Score = 46.1 bits (23), Expect = 0.38 Identities = 26/27 (96%) Strand = Plus / Minus Query: 85 acttatttattaatttattaacttatt 111 |||| |||||||||||||||||||||| Sbjct: 158642 acttgtttattaatttattaacttatt 158616
>emb|BX119921.9| Zebrafish DNA sequence from clone CH211-198N10 in linkage group 16, complete sequence Length = 126091 Score = 46.1 bits (23), Expect = 0.38 Identities = 26/27 (96%) Strand = Plus / Plus Query: 85 acttatttattaatttattaacttatt 111 |||| |||||||||||||||||||||| Sbjct: 85745 acttgtttattaatttattaacttatt 85771
>emb|BX470085.6| Zebrafish DNA sequence from clone DKEY-238K17 in linkage group 20, complete sequence Length = 107263 Score = 46.1 bits (23), Expect = 0.38 Identities = 26/27 (96%) Strand = Plus / Minus Query: 87 ttatttattaatttattaacttattaa 113 ||||||||||||||||||| ||||||| Sbjct: 40257 ttatttattaatttattaatttattaa 40231
>emb|AL732478.7| Mouse DNA sequence from clone RP23-42N14 on chromosome 2, complete sequence Length = 203434 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Plus Query: 81 tgagacttatttattaatttatt 103 ||||||||||||||||||||||| Sbjct: 94477 tgagacttatttattaatttatt 94499
>dbj|AB045609.1| Streptococcus suis purF, purM, purN, purH, ssuMA, ssuMB, ssuRA, ssuRB, purD, purE genes, partial and complete cds Length = 9618 Score = 46.1 bits (23), Expect = 0.38 Identities = 29/31 (93%) Strand = Plus / Plus Query: 945 ttggtcctggcagtcagaccagccaaggttg 975 ||||||||||||||||| |||| |||||||| Sbjct: 1901 ttggtcctggcagtcagtccagacaaggttg 1931
>emb|CR450744.23| Zebrafish DNA sequence from clone CH211-242F18 in linkage group 10, complete sequence Length = 153507 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Minus Query: 89 atttattaatttattaacttattaacttat 118 ||||||||||||||||| ||||||| |||| Sbjct: 19148 atttattaatttattaatttattaatttat 19119 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Minus Query: 89 atttattaatttattaacttattaacttat 118 ||||||||||||||||| ||||||| |||| Sbjct: 19188 atttattaatttattaatttattaatttat 19159 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 89 atttattaatttattaacttattaa 113 ||||||||||||||||| ||||||| Sbjct: 19140 atttattaatttattaatttattaa 19116 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 89 atttattaatttattaacttattaa 113 ||||||||||||||||| ||||||| Sbjct: 19180 atttattaatttattaatttattaa 19156
>ref|XM_001030672.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_01043260) mRNA, complete cds Length = 921 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 86 cttatttattaatttattaact 107 |||||||||||||||||||||| Sbjct: 833 cttatttattaatttattaact 854
>ref|XM_001030298.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_01100430) mRNA, complete cds Length = 3051 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 93 attaatttattaacttattaac 114 |||||||||||||||||||||| Sbjct: 599 attaatttattaacttattaac 620
>gb|CP000393.1| Trichodesmium erythraeum IMS101, complete genome Length = 7750108 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 89 atttattaatttattaacttattaacttat 118 ||||||||||||||||| ||||||| |||| Sbjct: 3719732 atttattaatttattaatttattaatttat 3719761 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 89 atttattaatttattaacttattaa 113 ||||||||||||||||| ||||||| Sbjct: 3719740 atttattaatttattaatttattaa 3719764
>gb|AC186761.1| Pongo pygmaeus abelii chromosome UNK clone CH276-23H12, complete sequence Length = 194996 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 816 tttgataaaggaaattcttatt 837 |||||||||||||||||||||| Sbjct: 122966 tttgataaaggaaattcttatt 122945
>emb|CR792426.18| Zebrafish DNA sequence from clone DKEY-23A11 in linkage group 3, complete sequence Length = 210874 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Minus Query: 85 acttatttattaatttattaacttattaac 114 ||||||| ||||| |||||||||||||||| Sbjct: 145715 acttattaattaacttattaacttattaac 145686
>gb|AC137679.11| Mus musculus chromosome 12, clone RP23-302N13, complete sequence Length = 186273 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Minus Query: 87 ttatttattaatttattaacttattaactt 116 ||||||||| ||||||| |||||||||||| Sbjct: 176747 ttatttatttatttatttacttattaactt 176718
>gb|AC161603.4| Mus musculus BAC clone RP23-304M9 from chromosome 15, complete sequence Length = 199419 Score = 44.1 bits (22), Expect = 1.5 Identities = 31/34 (91%) Strand = Plus / Minus Query: 85 acttatttattaatttattaacttattaacttat 118 ||||||||||| ||||||| ||||||| |||||| Sbjct: 48504 acttatttatttatttatttacttatttacttat 48471
>gb|AC146257.3| Pan troglodytes BAC clone CH251-113A6 from Y, complete sequence Length = 174522 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1492 aaaatatgtatatctaactatatata 1517 ||||||||||||| |||||||||||| Sbjct: 61541 aaaatatgtatatataactatatata 61516
>gb|AC125523.4| Mus musculus BAC clone RP24-376O18 from chromosome 15, complete sequence Length = 176341 Score = 44.1 bits (22), Expect = 1.5 Identities = 31/34 (91%) Strand = Plus / Minus Query: 85 acttatttattaatttattaacttattaacttat 118 ||||||||||| ||||||| ||||||| |||||| Sbjct: 107684 acttatttatttatttatttacttatttacttat 107651
>gb|AC098884.3| Mus musculus BAC clone RP23-122I23 from 3, complete sequence Length = 195428 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 814 gttttgataaaggaaattcttatttg 839 ||||||||||||| |||||||||||| Sbjct: 118988 gttttgataaaggtaattcttatttg 119013
>dbj|AB236548.1| Hepatitis B virus preC/C gene, partial sequence, clone: ASC34 Length = 334 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1038 aatgtccatgccctgaaagcca 1059 |||||||||||||||||||||| Sbjct: 271 aatgtccatgccctgaaagcca 250
>gb|AC118207.13| Mus musculus chromosome 8, clone RP24-215A12, complete sequence Length = 187453 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 83 agacttatttattaatttatta 104 |||||||||||||||||||||| Sbjct: 16944 agacttatttattaatttatta 16923
>emb|BX927247.20| Zebrafish DNA sequence from clone CH211-189K22 in linkage group 6, complete sequence Length = 160349 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 89 atttattaatttattaacttattaacttat 118 ||||||||||||||||| ||||||| |||| Sbjct: 19854 atttattaatttattaatttattaatttat 19883 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 89 atttattaatttattaacttattaa 113 ||||||||||||||||| ||||||| Sbjct: 19862 atttattaatttattaatttattaa 19886
>gb|AC022367.34| Homo sapiens 12 BAC RP11-685B13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 175184 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 84 gacttatttattaatttattaacttattaa 113 |||||||||||||||||||| |||| |||| Sbjct: 127826 gacttatttattaatttatttactttttaa 127855
>gb|L36887.1|YSCMTCG03 Saccharomyces cerevisiae mitochondrion transfer RNA- Leu, Gln, Lys, Arg, Gly, Asp, Ser2, Arg2, Ala, Ile, Tyr, Asn genes Length = 6340 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 89 atttattaatttattaacttattaacttat 118 ||||||||||||||||| ||||||| |||| Sbjct: 3608 atttattaatttattaatttattaatttat 3637 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||||| ||||| Sbjct: 3634 ttatttattaatttattaatttatt 3658
>gb|AF547983.1| Schizosaccharomyces japonicus mitochondrial DNA, complete genome Length = 80059 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 91 ttattaatttattaacttatta 112 |||||||||||||||||||||| Sbjct: 12565 ttattaatttattaacttatta 12586 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 91 ttattaatttattaacttatta 112 |||||||||||||||||||||| Sbjct: 76171 ttattaatttattaacttatta 76192
>emb|CR753871.6| Zebrafish DNA sequence from clone CH211-247M23 in linkage group 15, complete sequence Length = 147392 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 90 tttattaatttattaacttatt 111 |||||||||||||||||||||| Sbjct: 45575 tttattaatttattaacttatt 45596
>emb|AL590559.3| Human DNA sequence from clone RP11-393N21 on chromosome 1 Contains the 5' end of the gene for PAI-1 mRNA-binding protein (PAI-RBP1), a poly(A) binding protein, cytoplasmic 4 (PABPC4) pseudogene, a novel gene and a CpG island, complete sequence Length = 150651 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 87 ttatttattaatttattaacttatta 112 ||||||||||||||||||| |||||| Sbjct: 101088 ttatttattaatttattaatttatta 101063
>dbj|BS000583.2| Pan troglodytes chromosome Y clone:PTB-614F22, complete sequence Length = 158476 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1492 aaaatatgtatatctaactatatata 1517 ||||||||||||| |||||||||||| Sbjct: 84369 aaaatatgtatatataactatatata 84394
>dbj|BS000591.1| Pan troglodytes chromosome Y clone:PTB-113D22, complete sequence Length = 188847 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1492 aaaatatgtatatctaactatatata 1517 ||||||||||||| |||||||||||| Sbjct: 182393 aaaatatgtatatataactatatata 182418
>emb|AL117383.19|HSJ885A10 Human DNA sequence from clone RP5-885A10 on chromosome 20 Contains the CBLNL1 gene for cerebellin precursor-like 1 and a CpG Island, complete sequence Length = 117854 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 816 tttgataaaggaaattcttatt 837 |||||||||||||||||||||| Sbjct: 34008 tttgataaaggaaattcttatt 33987
>emb|V00695.1|MISC14 Yeast mitochondrial tRNA genes (several, map positions 3.5 to 8.6) encoding tRNAs for Lys, Arg, Gly, Asp, Ser, Arg, and Ala Length = 3630 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 89 atttattaatttattaacttattaacttat 118 ||||||||||||||||| ||||||| |||| Sbjct: 2764 atttattaatttattaatttattaatttat 2793 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||||| ||||| Sbjct: 2790 ttatttattaatttattaatttatt 2814
>emb|AL035476.7|PFMAL4P3 Plasmodium falciparum MAL4P3 Length = 349751 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 87 ttatttattaatttattaacttatta 112 ||||||||||||||||||| |||||| Sbjct: 215077 ttatttattaatttattaatttatta 215102
>emb|AJ011856.1|SCE011856 Saccharomyces cerevisiae complete mitochondrial genome Length = 85779 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 89 atttattaatttattaacttattaacttat 118 ||||||||||||||||| ||||||| |||| Sbjct: 69128 atttattaatttattaatttattaatttat 69157 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||||| ||||| Sbjct: 69154 ttatttattaatttattaatttatt 69178
>emb|BX537117.6| Zebrafish DNA sequence from clone CH211-281N15 in linkage group 17, complete sequence Length = 161999 Score = 44.1 bits (22), Expect = 1.5 Identities = 31/34 (91%) Strand = Plus / Minus Query: 85 acttatttattaatttattaacttattaacttat 118 ||||||||||| ||||||| ||||||| |||||| Sbjct: 135283 acttatttatttatttatttacttatttacttat 135250
>emb|BX510997.9| Zebrafish DNA sequence from clone CH211-253F2 in linkage group 25, complete sequence Length = 104617 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 87 ttatttattaatttattaactt 108 |||||||||||||||||||||| Sbjct: 29279 ttatttattaatttattaactt 29300
>emb|BX470184.9| Zebrafish DNA sequence from clone CH211-214H13 in linkage group 23, complete sequence Length = 205568 Score = 44.1 bits (22), Expect = 1.5 Identities = 31/34 (91%) Strand = Plus / Plus Query: 85 acttatttattaatttattaacttattaacttat 118 ||||||||||||||| ||||| ||||| |||||| Sbjct: 192558 acttatttattaattaattaatttattcacttat 192591
>gb|AC116986.2| Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4, complete sequence Length = 333321 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 87 ttatttattaatttattaacttatta 112 ||||||||||||||||||| |||||| Sbjct: 121156 ttatttattaatttattaatttatta 121181 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 89 atttattaatttattaacttattaacttat 118 ||||||||||||||||| ||||||| |||| Sbjct: 218104 atttattaatttattaatttattaatttat 218133 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 89 atttattaatttattaacttattaacttat 118 ||||||||||||||||| ||||||| |||| Sbjct: 218112 atttattaatttattaatttattaatttat 218141
>gb|AF538053.1|MBREV Monosiga brevicollis mitochondrion, complete genome Length = 76568 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 89 atttattaatttattaacttattaacttat 118 ||||||||||||||||| ||||||| |||| Sbjct: 14836 atttattaatttattaatttattaatttat 14865 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 89 atttattaatttattaacttattaa 113 ||||||||||||||||| ||||||| Sbjct: 14736 atttattaatttattaatttattaa 14760 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 89 atttattaatttattaacttattaa 113 ||||||||||||||||| ||||||| Sbjct: 14844 atttattaatttattaatttattaa 14868
>emb|CR388409.5| Zebrafish DNA sequence from clone DKEY-60P1 in linkage group 18, complete sequence Length = 40942 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 88 tatttattaatttattaacttattaa 113 |||||||||||||||||| ||||||| Sbjct: 29950 tatttattaatttattaatttattaa 29975
>gb|AC007043.3|AC007043 Homo sapiens BAC clone RP11-507E21 from Y, complete sequence Length = 107402 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1492 aaaatatgtatatctaactatatata 1517 ||||||||||||| |||||||||||| Sbjct: 76491 aaaatatgtatatataactatatata 76516
>emb|BX005054.7| Zebrafish DNA sequence from clone DKEY-209N16 in linkage group 6, complete sequence Length = 230686 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 85 acttatttattaatttattaac 106 |||||||||||||||||||||| Sbjct: 40336 acttatttattaatttattaac 40357
>gb|AC114598.9| Mus musculus chromosome 8, clone RP23-301G13, complete sequence Length = 211410 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 824 aggaaattcttatttgcattaa 845 |||||||||||||||||||||| Sbjct: 113314 aggaaattcttatttgcattaa 113293
>emb|BX284620.5| Zebrafish DNA sequence from clone CH211-218E20 in linkage group 20, complete sequence Length = 201942 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 90 tttattaatttattaacttatt 111 |||||||||||||||||||||| Sbjct: 187779 tttattaatttattaacttatt 187758
>emb|BX294166.5| Zebrafish DNA sequence from clone CH211-244D20 in linkage group 22, complete sequence Length = 175769 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 94 ttaatttattaacttattaact 115 |||||||||||||||||||||| Sbjct: 141642 ttaatttattaacttattaact 141621
>emb|CT030189.8| Mouse DNA sequence from clone RP24-402B23 on chromosome 12, complete sequence Length = 223910 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 87 ttatttattaatttattaacttattaactt 116 ||||||||| ||||||| |||||||||||| Sbjct: 183962 ttatttatttatttatttacttattaactt 183991
>emb|AL691422.15| Mouse DNA sequence from clone RP23-85B20 on chromosome X, complete sequence Length = 164287 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 89 atttattaatttattaacttat 110 |||||||||||||||||||||| Sbjct: 17456 atttattaatttattaacttat 17477
>emb|CR407545.9| Zebrafish DNA sequence from clone CH211-197E20 in linkage group 25, complete sequence Length = 103187 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 87 ttatttattaatttattaactt 108 |||||||||||||||||||||| Sbjct: 66431 ttatttattaatttattaactt 66410
>emb|AL929232.3| Mouse DNA sequence from clone RP23-294G12 on chromosome 2, complete sequence Length = 76864 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Minus Query: 89 atttattaatttattaacttattaacttat 118 ||||||||||| ||||| |||||||||||| Sbjct: 23405 atttattaattcattaatttattaacttat 23376
>ref|XM_001010238.1| Tetrahymena thermophila SB210 cyclic nucleotide-binding domain containing protein (TTHERM_01050390) mRNA, complete cds Length = 4017 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 ttattaatttattaacttatt 111 ||||||||||||||||||||| Sbjct: 2456 ttattaatttattaacttatt 2436
>emb|CR318596.19| Zebrafish DNA sequence from clone DKEY-104N16 in linkage group 7, complete sequence Length = 225081 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 ttatttattaatttattaacttatt 111 |||||||||||||||||||| |||| Sbjct: 161706 ttatttattaatttattaacctatt 161730
>emb|CR855033.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0147M20, complete sequence Length = 87541 Score = 42.1 bits (21), Expect = 6.0 Identities = 45/53 (84%) Strand = Plus / Minus Query: 418 attccactgcacaaccatccaggcatgactgtcctcagcaaacttctctatgg 470 |||||||| ||||| || ||||| ||||| || || ||||| ||||||||||| Sbjct: 4360 attccacttcacaatcacccaggaatgacagttctgagcaagcttctctatgg 4308
>emb|CR855037.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0820C10, complete sequence Length = 114139 Score = 42.1 bits (21), Expect = 6.0 Identities = 45/53 (84%) Strand = Plus / Minus Query: 418 attccactgcacaaccatccaggcatgactgtcctcagcaaacttctctatgg 470 |||||||| ||||| || ||||| ||||| || || ||||| ||||||||||| Sbjct: 88571 attccacttcacaatcacccaggaatgacagttctgagcaagcttctctatgg 88519
>ref|NM_001067468.1| Oryza sativa (japonica cultivar-group) Os08g0133000 (Os08g0133000) mRNA, complete cds Length = 1246 Score = 42.1 bits (21), Expect = 6.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 378 cttctctattggaatatactgcataccagcatc 410 ||||||||||||||||| |||| ||||| |||| Sbjct: 489 cttctctattggaatattctgcttaccaacatc 521
>ref|NM_001058651.1| Oryza sativa (japonica cultivar-group) Os04g0151900 (Os04g0151900) mRNA, partial cds Length = 3268 Score = 42.1 bits (21), Expect = 6.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 418 attccactgcacaaccatccaggcatgactgtcctcagcaaacttctctatgg 470 |||||||| ||||| || ||||| ||||| || || ||||| ||||||||||| Sbjct: 2433 attccacttcacaatcacccaggaatgacagttctgagcaagcttctctatgg 2485
>gb|AC189673.2| Trichinella spiralis BAC clone TS195-25H12 from chromosome unknown, complete sequence Length = 138242 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 88 tatttattaatttattaacttatta 112 |||||||||||||||||| |||||| Sbjct: 127886 tatttattaatttattaaattatta 127862
>emb|CR450832.12| Zebrafish DNA sequence from clone CH211-278F9 in linkage group 23, complete sequence Length = 161267 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||||| ||||| Sbjct: 3765 ttatttattaatttattaatttatt 3789
>gb|DQ504303.1| Amia calva parahox gene cluster, complete sequence Length = 41646 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||||| ||||| Sbjct: 13612 ttatttattaatttattaatttatt 13588
>ref|NW_001509355.1| Eimeria tenella str. Houghton chromosome 1 emb|AM269894.1| Eimeria tenella chromosome 1, ordered contigs Length = 1347714 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||||| ||||| Sbjct: 1056725 ttatttattaatttattaatttatt 1056749
>emb|CR361550.7| Zebrafish DNA sequence from clone DKEYP-89A11 in linkage group 14, complete sequence Length = 181404 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 598 atacttttgagtgtgcagcag 618 ||||||||||||||||||||| Sbjct: 76869 atacttttgagtgtgcagcag 76889
>gb|DQ400445.1| Ictalurus punctatus immunoglobulin heavy chain gene locus, partial sequence and unknown gene Length = 257153 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1493 aaatatgtatatctaactatatata 1517 |||||||||||||||| |||||||| Sbjct: 198406 aaatatgtatatctaaatatatata 198430
>gb|AC147271.3| Pan troglodytes BAC clone RP43-121F15 from chromosome 7, complete sequence Length = 180569 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 ttattaatttattaacttatt 111 ||||||||||||||||||||| Sbjct: 56528 ttattaatttattaacttatt 56508
>gb|AC170875.2| Mus musculus BAC clone RP24-266D3 from chromosome 3, complete sequence Length = 155248 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||||| ||||| Sbjct: 137499 ttatttattaatttattaatttatt 137475
>gb|AC168212.7| Mus musculus chromosome 18, clone RP23-290N19, complete sequence Length = 197719 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 753 atatttatttgccaagtaatt 773 ||||||||||||||||||||| Sbjct: 70106 atatttatttgccaagtaatt 70126
>gb|AC108424.14| Mus musculus chromosome 7, clone RP23-105A10, complete sequence Length = 198191 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1378 tcttccctttttctctctttg 1398 ||||||||||||||||||||| Sbjct: 164256 tcttccctttttctctctttg 164276
>gb|AC168222.2| Mus musculus BAC clone CH25-395E5 from chromosome 10, complete sequence Length = 96290 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1495 atatgtatatctaactatata 1515 ||||||||||||||||||||| Sbjct: 23387 atatgtatatctaactatata 23367
>gb|AC161793.9| Mus musculus chromosome 7, clone RP23-80J7, complete sequence Length = 268158 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1378 tcttccctttttctctctttg 1398 ||||||||||||||||||||| Sbjct: 22224 tcttccctttttctctctttg 22244
>gb|U60168.1| Dictyostelium discoideum PrtC (prtC) gene, complete cds Length = 2165 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||||| ||||| Sbjct: 1442 ttatttattaatttattaatttatt 1466
>gb|U89350.1|DDU89350 Dictyostelium discoideum golvesin (gol) gene, complete cds Length = 2500 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||||| ||||| Sbjct: 1303 ttatttattaatttattaatttatt 1327
>gb|AC134332.2| Mus musculus BAC clone RP24-385N13 from chromosome 1, complete sequence Length = 124525 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 54 gtgttcaaagtgaattcttctgagg 78 |||||||||||||||| |||||||| Sbjct: 52410 gtgttcaaagtgaattattctgagg 52434
>gb|AC153970.4| Mus musculus 10 BAC RP24-116A15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 178124 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||||| ||||| Sbjct: 167564 ttatttattaatttattaatttatt 167540
>gb|AC144712.2| Danio rerio clone CH211-4G3, complete sequence Length = 197292 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||||| ||||| Sbjct: 53338 ttatttattaatttattaatttatt 53314
>gb|AF165140.3| Homo sapiens chromosome 8 clone CTA-398G7 map p12, complete sequence Length = 114898 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 tttattaacttattaacttat 118 ||||||||||||||||||||| Sbjct: 38960 tttattaacttattaacttat 38980
>gb|AY518518.1| Glycine max disease resistance protein (5gG3) gene, complete cds Length = 7822 Score = 42.1 bits (21), Expect = 6.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 85 acttatttattaatttattaacttattaa 113 ||||||||||| ||||||||| ||||||| Sbjct: 134 acttatttatttatttattaatttattaa 162
>gb|AC116920.3| Dictyostelium discoideum chromosome 2 map 4415041-4520361 strain AX4, complete sequence Length = 105320 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||||| ||||| Sbjct: 97833 ttatttattaatttattaatttatt 97809
>gb|AC115800.13| Mus musculus chromosome 8, clone RP23-407E22, complete sequence Length = 228513 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 agacttatttattaatttatt 103 ||||||||||||||||||||| Sbjct: 159312 agacttatttattaatttatt 159292
>gb|AC147477.1| Pan troglodytes BAC clone CH251-483E9 from Y, complete sequence Length = 213500 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 ttatttattaatttattaact 107 ||||||||||||||||||||| Sbjct: 22142 ttatttattaatttattaact 22122
>gb|AF312489.2| Plasmodium falciparum phosphatidylserine decarboxylase mRNA, complete cds Length = 1699 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||||| ||||| Sbjct: 1417 ttatttattaatttattaatttatt 1441
>gb|AC133167.3| Mus musculus BAC clone RP24-211H4 from chromosome 18, complete sequence Length = 159356 Score = 42.1 bits (21), Expect = 6.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 85 acttatttattaatttattaacttattaactta 117 ||||||||||| ||||||| ||||||| ||||| Sbjct: 44360 acttatttatttatttatttacttatttactta 44392
>gb|AC124567.4| Mus musculus BAC clone RP23-145E22 from 6, complete sequence Length = 218924 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 97 atttattaacttattaacttatata 121 ||||||| ||||||||||||||||| Sbjct: 47512 atttatttacttattaacttatata 47536
>gb|AC092938.7| Homo sapiens 3q BAC RP11-71G7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164725 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 566 ttatatatgcatcatagtttt 586 ||||||||||||||||||||| Sbjct: 12991 ttatatatgcatcatagtttt 12971
>gb|AC104866.10| Mus musculus chromosome 17, clone RP23-268C14, complete sequence Length = 176240 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||||| ||||| Sbjct: 5676 ttatttattaatttattaatttatt 5700
>gb|AC118931.8| Mus musculus chromosome 19, clone RP24-118A21, complete sequence Length = 233367 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 682 tgaatattattgtttcatttc 702 ||||||||||||||||||||| Sbjct: 64204 tgaatattattgtttcatttc 64184
>gb|AC102031.7| Mus musculus chromosome 3, clone RP23-14C8, complete sequence Length = 181179 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||||| ||||| Sbjct: 128138 ttatttattaatttattaatttatt 128162
>gb|AC087388.9| Homo sapiens chromosome 17, clone RP11-199F11, complete sequence Length = 121017 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||||| ||||| Sbjct: 41923 ttatttattaatttattaatttatt 41899
>gb|AC158786.8| Mus musculus chromosome 5, clone RP23-228M24, complete sequence Length = 210494 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||| ||||||| Sbjct: 108325 ttatttattaatttatttacttatt 108301
>gb|AC158592.4| Mus musculus 10 BAC RP23-198D4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196286 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||||| ||||| Sbjct: 10297 ttatttattaatttattaatttatt 10273
>emb|CR769778.10| Zebrafish DNA sequence from clone CH211-147N12 in linkage group 18, complete sequence Length = 162450 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||||| ||||| Sbjct: 31661 ttatttattaatttattaatttatt 31685
>emb|CR974447.12| Mouse DNA sequence from clone RP23-452G2 on chromosome 17, complete sequence Length = 139010 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 agacttatttattaatttatt 103 ||||||||||||||||||||| Sbjct: 22560 agacttatttattaatttatt 22540
>emb|CR848835.7| Zebrafish DNA sequence from clone DKEY-71G12 in linkage group 15, complete sequence Length = 216994 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||||| ||||| Sbjct: 35831 ttatttattaatttattaatttatt 35807
>gb|AC104209.7| Homo sapiens chromosome 18, clone RP11-653G8, complete sequence Length = 210849 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 gaagaatgtgttcaaagtgaa 67 ||||||||||||||||||||| Sbjct: 71287 gaagaatgtgttcaaagtgaa 71307
>emb|CR788319.8| Zebrafish DNA sequence from clone DKEY-245H10 in linkage group 12, complete sequence Length = 188205 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||| ||||||| Sbjct: 78560 ttatttattaatttatttacttatt 78584
>emb|BX927368.13| Zebrafish DNA sequence from clone CH211-15J16 in linkage group 23, complete sequence Length = 176438 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||||| ||||| Sbjct: 116796 ttatttattaatttattaatttatt 116820
>emb|CR792439.12| Zebrafish DNA sequence from clone DKEYP-100A1 in linkage group 8, complete sequence Length = 170028 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 ttatttattaatttattaacttatt 111 ||||||||| ||||||||||||||| Sbjct: 147046 ttatttatttatttattaacttatt 147070
>gb|AC093817.3| Homo sapiens BAC clone RP11-364P22 from 4, complete sequence Length = 183186 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1418 tctttgggaatttgatctgataaaa 1442 |||||||||||||||| |||||||| Sbjct: 53254 tctttgggaatttgatatgataaaa 53230
>emb|CR376836.6| Zebrafish DNA sequence from clone CH211-190O6 in linkage group 25, complete sequence Length = 132156 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||||| ||||| Sbjct: 9294 ttatttattaatttattaatttatt 9270
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 6.0 Identities = 45/53 (84%) Strand = Plus / Minus Query: 418 attccactgcacaaccatccaggcatgactgtcctcagcaaacttctctatgg 470 |||||||| ||||| || ||||| ||||| || || ||||| ||||||||||| Sbjct: 3553602 attccacttcacaatcacccaggaatgacagttctgagcaagcttctctatgg 3553550
>emb|Z95400.2|HS393P23 Human DNA sequence from clone RP3-393P23 on chromosome Xq21.1-21.33 Contains the 5' end of the KLHL4 gene for kelch-like 4 (Drosophila), complete sequence Length = 133120 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 atttattaacttattaactta 117 ||||||||||||||||||||| Sbjct: 107789 atttattaacttattaactta 107809
>emb|AL353787.21| Human DNA sequence from clone RP11-667H17 on chromosome 9 Contains the 5' end of the SLC28A3 gene for solute carrier family 28 (sodium-coupled nucleoside transporter), member 3, (CNT3), complete sequence Length = 83639 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 ttatttattaatttattaacttatt 111 ||||||||| ||||||||||||||| Sbjct: 68526 ttatttatttatttattaacttatt 68502
>emb|AL158211.29| Human DNA sequence from clone RP11-573G6 on chromosome 10 Contains a ribosomal protein L31 (RPL31) pseudogene, the BUP gene for BUP protein, the BMI1 gene for B lymphoma Mo-MLV insertion region (mouse) (MGC12685), the 5' end of the SPAG6 gene for sperm associated antigen 6 (pf16, MGC26276, Repro-SA-1,DKFZp434I153), the 5' end of a novel gene and seven CpG islands, complete sequence Length = 138094 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1048 ccctgaaagccatcactccct 1068 ||||||||||||||||||||| Sbjct: 1929 ccctgaaagccatcactccct 1909
>gb|AC011204.6| Homo sapiens, clone RP11-115P4, complete sequence Length = 155926 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 tttattaacttattaacttat 118 ||||||||||||||||||||| Sbjct: 63018 tttattaacttattaacttat 63038
>emb|AL157831.29| Human DNA sequence from clone RP11-108B14 on chromosome 10 Contains a ribosomal protein L29 (RPL29)(HIP,HUMRPL29) pseudogene, a CGI-45 protein (CGI-45) pseudogene, a novel pseudogene, a pseudogene similar to part of PSME2 (PA28B,REGbeta,PA28beta) (proteasome (prosome, macropain) activator subunit 2 (PA28 beta)) and a CpG island, complete sequence Length = 176577 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1048 ccctgaaagccatcactccct 1068 ||||||||||||||||||||| Sbjct: 176506 ccctgaaagccatcactccct 176486
>emb|AL138693.45| Human DNA sequence from clone RP11-321C24 on chromosome 13 Contains a novel gene, the 5' end of the GTF2F2 gene for general transcription factor IIF, polypeptide 2, 30kDa, a novel gene similar to RIKEN cDNA 2210017A09 gene and a CpG island, complete sequence Length = 160582 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 ttatttattaatttattaacttatt 111 ||||||||| ||||||||||||||| Sbjct: 14496 ttatttatttatttattaacttatt 14520
>emb|BX537308.18| Zebrafish DNA sequence from clone DKEY-231A18 in linkage group 4, complete sequence Length = 191880 Score = 42.1 bits (21), Expect = 6.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 87 ttatttattaatttattaacttattaact 115 ||||||||||| ||||||| ||||||||| Sbjct: 160678 ttatttattaacttattaatttattaact 160706
>dbj|BS000653.1| Pan troglodytes chromosome Y clone:PTB-017B13, complete sequences Length = 157263 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 ttatttattaatttattaact 107 ||||||||||||||||||||| Sbjct: 25319 ttatttattaatttattaact 25339
>gb|AC171141.2| Helobdella robusta clone CH306-1B3, complete sequence Length = 94001 Score = 42.1 bits (21), Expect = 6.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 86 cttatttattaatttattaacttattaacttat 118 |||||||||||||| ||| | |||||||||||| Sbjct: 62403 cttatttattaattaatttatttattaacttat 62435
>emb|AL929358.1|PFA929358 Plasmodium falciparum strain 3D7, chromosome 9; segment 4/5 Length = 254050 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||||| ||||| Sbjct: 124784 ttatttattaatttattaatttatt 124760
>emb|AL606655.3|OSJN00103 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0040D15, complete sequence Length = 130618 Score = 42.1 bits (21), Expect = 6.0 Identities = 45/53 (84%) Strand = Plus / Minus Query: 418 attccactgcacaaccatccaggcatgactgtcctcagcaaacttctctatgg 470 |||||||| ||||| || ||||| ||||| || || ||||| ||||||||||| Sbjct: 19868 attccacttcacaatcacccaggaatgacagttctgagcaagcttctctatgg 19816
>gb|AY865313.1| Ambrosia trifida isolate 60Amb tRNA-Glu (trnE) gene, partial sequence; tRNA-Tyr (trnY) gene, complete sequence; and trnY-rpoB intergenic spacer, partial sequence; chloroplast Length = 1185 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 atttattaacttattaactta 117 ||||||||||||||||||||| Sbjct: 761 atttattaacttattaactta 741
>emb|AL713962.14| Mouse DNA sequence from clone RP23-3D5 on chromosome 11, complete sequence Length = 230198 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 ttatttattaatttattaacttatt 111 ||||||||| ||||||||||||||| Sbjct: 49836 ttatttatttatttattaacttatt 49812
>emb|BX511252.17| Zebrafish DNA sequence from clone CH211-240E14 in linkage group 16, complete sequence Length = 137574 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 598 atacttttgagtgtgcagcag 618 ||||||||||||||||||||| Sbjct: 45146 atacttttgagtgtgcagcag 45126
>emb|AL807799.5| Zebrafish DNA sequence from clone CH211-257P7 in linkage group 2, complete sequence Length = 175342 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||| ||||||| Sbjct: 167937 ttatttattaatttattgacttatt 167913
>emb|BX276097.12| Zebrafish DNA sequence from clone DKEY-97C6 in linkage group 20, complete sequence Length = 128871 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||||| ||||| Sbjct: 31972 ttatttattaatttattaatttatt 31996
>emb|AL953887.10| Zebrafish DNA sequence from clone CH211-199L3 in linkage group 20, complete sequence Length = 198595 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 598 atacttttgagtgtgcagcag 618 ||||||||||||||||||||| Sbjct: 87077 atacttttgagtgtgcagcag 87057
>gb|AC134903.4| Mus musculus BAC clone RP23-329A21 from chromosome 5, complete sequence Length = 198368 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 ttatttattaatttattaacttatt 111 ||||||||| ||||||||||||||| Sbjct: 51921 ttatttattgatttattaacttatt 51945
>emb|BX571727.8| Zebrafish DNA sequence from clone DKEY-14I22 in linkage group 5, complete sequence Length = 102670 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||| ||||||| Sbjct: 87107 ttatttattaatttatttacttatt 87083
>emb|CR392004.12| Zebrafish DNA sequence from clone CH211-165H11 in linkage group 18, complete sequence Length = 64955 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||||| ||||| Sbjct: 5904 ttatttattaatttattaatttatt 5928
>gb|AC009489.3|AC009489 Homo sapiens BAC clone RP11-339J4 from Y, complete sequence Length = 100953 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 ttatttattaatttattaact 107 ||||||||||||||||||||| Sbjct: 68884 ttatttattaatttattaact 68904
>dbj|BS000540.1| Pan troglodytes chromosome Y clone:PTB-144P03, complete sequences Length = 171424 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 ttatttattaatttattaact 107 ||||||||||||||||||||| Sbjct: 98904 ttatttattaatttattaact 98924
>emb|BX294385.17| Zebrafish DNA sequence from clone CH211-197E8 in linkage group 24, complete sequence Length = 155584 Score = 42.1 bits (21), Expect = 6.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 85 acttatttattaatttattaacttattaa 113 ||||||||||| ||||||| ||||||||| Sbjct: 56266 acttatttatttatttatttacttattaa 56238
>emb|BX908752.8| Zebrafish DNA sequence from clone DKEYP-12C7 in linkage group 18, complete sequence Length = 49348 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||||| ||||| Sbjct: 46619 ttatttattaatttattaatttatt 46643
>emb|CR391435.1| Gallus gallus finished cDNA, clone ChEST650e12 Length = 719 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 tttattaacttattaacttat 118 ||||||||||||||||||||| Sbjct: 674 tttattaacttattaacttat 694
>emb|BX004772.17| Zebrafish DNA sequence from clone DKEY-15L1 in linkage group 7, complete sequence Length = 210545 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||||| ||||| Sbjct: 94256 ttatttattaatttattaatttatt 94232
>dbj|AK099391.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033077B10, full insert sequence Length = 1248 Score = 42.1 bits (21), Expect = 6.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 378 cttctctattggaatatactgcataccagcatc 410 ||||||||||||||||| |||| ||||| |||| Sbjct: 490 cttctctattggaatattctgcttaccaacatc 522
>dbj|AP004978.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT44L05, TM0162a, complete sequence Length = 92619 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 atttattaatttattaactta 109 ||||||||||||||||||||| Sbjct: 20432 atttattaatttattaactta 20412
>dbj|AK066797.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013079L05, full insert sequence Length = 3272 Score = 42.1 bits (21), Expect = 6.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 418 attccactgcacaaccatccaggcatgactgtcctcagcaaacttctctatgg 470 |||||||| ||||| || ||||| ||||| || || ||||| ||||||||||| Sbjct: 2435 attccacttcacaatcacccaggaatgacagttctgagcaagcttctctatgg 2487
>dbj|AK061574.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-G02, full insert sequence Length = 1202 Score = 42.1 bits (21), Expect = 6.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 378 cttctctattggaatatactgcataccagcatc 410 ||||||||||||||||| |||| ||||| |||| Sbjct: 492 cttctctattggaatattctgcttaccaacatc 524
>dbj|AP004911.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT13O11, TM0069, complete sequence Length = 103659 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 85 acttatttattaatttattaa 105 ||||||||||||||||||||| Sbjct: 82083 acttatttattaatttattaa 82103
>emb|BX470100.6| Zebrafish DNA sequence from clone DKEY-239K7 in linkage group 18, complete sequence Length = 117304 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||||| ||||| Sbjct: 82298 ttatttattaatttattaatttatt 82274
>emb|AL840636.10| Zebrafish DNA sequence from clone CH211-262K7 in linkage group 20, complete sequence Length = 174999 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||| ||||||| Sbjct: 167594 ttatttattaatttattgacttatt 167570
>emb|BX322554.3| Zebrafish DNA sequence from clone RP71-68G1 in linkage group 9, complete sequence Length = 138869 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||||| ||||| Sbjct: 133665 ttatttattaatttattaatttatt 133689
>emb|BX088532.7| Zebrafish DNA sequence from clone CH211-127E17 in linkage group 8, complete sequence Length = 115792 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||| ||||||| Sbjct: 110841 ttatttattaatttatttacttatt 110865
>gb|AC102255.10| Mus musculus chromosome 18, clone RP24-182H11, complete sequence Length = 195275 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 753 atatttatttgccaagtaatt 773 ||||||||||||||||||||| Sbjct: 132046 atatttatttgccaagtaatt 132066
>emb|AL845516.8| Zebrafish DNA sequence from clone DKEY-43F11, complete sequence Length = 205826 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||||| ||||| Sbjct: 78502 ttatttattaatttattaatttatt 78526
>dbj|AP001148.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-762L8, complete sequences Length = 169340 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 89 atttattaatttattaacttattaa 113 ||||||||||||||||| ||||||| Sbjct: 94972 atttattaatttattaatttattaa 94996
>emb|CT027588.10| Mouse DNA sequence from clone RP23-461P14 on chromosome 9, complete sequence Length = 182404 Score = 42.1 bits (21), Expect = 6.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 83 agacttatttattaatttattaacttatt 111 ||||||||||||| ||||||| ||||||| Sbjct: 130376 agacttatttatttatttatttacttatt 130348
>emb|AL672146.9| Mouse DNA sequence from clone RP23-390P18 on chromosome X, complete sequence Length = 178473 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 atgtgttcaaagtgaattctt 72 ||||||||||||||||||||| Sbjct: 96633 atgtgttcaaagtgaattctt 96613
>emb|CR388097.9| Zebrafish DNA sequence from clone CH211-10J9 in linkage group 3, complete sequence Length = 195927 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 tttattaatttattaacttat 110 ||||||||||||||||||||| Sbjct: 155844 tttattaatttattaacttat 155824
>gb|AC149087.4| Mus musculus BAC clone RP23-240E3 from 18, complete sequence Length = 227785 Score = 42.1 bits (21), Expect = 6.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 85 acttatttattaatttattaacttattaactta 117 ||||||||||| ||||||| ||||||| ||||| Sbjct: 142161 acttatttatttatttatttacttatttactta 142193
>emb|BX323452.15| Zebrafish DNA sequence from clone DKEYP-56C5 in linkage group 25, complete sequence Length = 162709 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 atttattaatttattaactta 109 ||||||||||||||||||||| Sbjct: 158655 atttattaatttattaactta 158635
>emb|AL935298.5| Zebrafish DNA sequence from clone CH211-160I12, complete sequence Length = 155911 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 ttaatttattaacttattaac 114 ||||||||||||||||||||| Sbjct: 115623 ttaatttattaacttattaac 115603
>gb|AC154247.2| Mus musculus BAC clone RP24-176G22 from chromosome 17, complete sequence Length = 162175 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 ttatttattaatttattaacttatt 111 ||||||||||||||||||| ||||| Sbjct: 22079 ttatttattaatttattaatttatt 22055
>emb|AL359352.21| Mouse DNA sequence from clone CT7-350K7 on chromosome 17, complete sequence Length = 162935 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 agacttatttattaatttatt 103 ||||||||||||||||||||| Sbjct: 128907 agacttatttattaatttatt 128887
>emb|AL645545.8| Mouse DNA sequence from clone RP23-203J4 on chromosome X, complete sequence Length = 181243 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1496 tatgtatatctaactatatat 1516 ||||||||||||||||||||| Sbjct: 41883 tatgtatatctaactatatat 41863
>emb|AL732482.8| Mouse DNA sequence from clone RP23-199C21 on chromosome 4, complete sequence Length = 191239 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 caaagtatcattatttgaaaa 188 ||||||||||||||||||||| Sbjct: 136690 caaagtatcattatttgaaaa 136670 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 324,049,272 Number of extensions: 17468926 Number of successful extensions: 380742 Number of sequences better than 10.0: 168 Number of HSP's gapped: 380696 Number of HSP's successfully gapped: 196 Length of query: 1566 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1543 Effective length of database: 18,503,978,556 Effective search space: 28551638911908 Effective search space used: 28551638911908 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
