ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf145e12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9FK81:Y5258_ARATH Uncharacterized protein At5g22580 - Arabidops... 101 3e-21
2Q9LUV2:POP3_ARATH Putative Pop3 protein - Arabidopsis thaliana (... 79 2e-14
3Q45539:CSBB_BACSU Putative glycosyltransferase csbB - Bacillus s... 34 0.59
4Q4PBL3:SET2_USTMA Histone-lysine N-methyltransferase, H3 lysine-... 32 2.9
5Q920R4:GASP1_RAT G-protein coupled receptor-associated sorting p... 30 6.5
6Q5U4C1:GASP1_MOUSE G-protein coupled receptor-associated sorting... 30 6.5
7Q9RUG2:DNAJ_DEIRA Chaperone protein dnaJ - Deinococcus radiodurans 30 8.5

>Q9FK81:Y5258_ARATH Uncharacterized protein At5g22580 - Arabidopsis thaliana (Mouse-ear|
           cress)
          Length = 111
 Score =  101 bits (251), Expect = 3e-21
 Identities = 48/103 (46%), Positives = 66/103 (64%)
 Frame = +2

Query: 65  AMGEFKHLCMAKFKEGVVVDDIIQELTKLAAELDTVKYFGWGKDVLNQEALTQGFTHVFV 244
           A   FKHL + KFKE   VD+I++ L  L +++DTVK F WG+D  + + L QGFTH F 
Sbjct: 2   ATSGFKHLVVVKFKEDTKVDEILKGLENLVSQIDTVKSFEWGEDKESHDMLRQGFTHAFS 61

Query: 245 MTFASAEDLAACMSHEKHSAFAATFMAALDKVVVMDFPLVFVK 373
           MTF + +   A  SH  H  F+A F A +DK+V++DFP+  VK
Sbjct: 62  MTFENKDGYVAFTSHPLHVEFSAAFTAVIDKIVLLDFPVAAVK 104



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>Q9LUV2:POP3_ARATH Putative Pop3 protein - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 109

 Score = 79.0 bits (193), Expect = 2e-14
 Identities = 41/100 (41%), Positives = 63/100 (63%), Gaps = 3/100 (3%)
 Frame = +2

Query: 65  AMGEFKHLCMAKFKEGVV---VDDIIQELTKLAAELDTVKYFGWGKDVLNQEALTQGFTH 235
           A G  KH+ +A FK+GV    ++++I+    L   ++ +K F WGKDV + E L QG+TH
Sbjct: 4   AKGPVKHVLLASFKDGVSPEKIEELIKGYANLVNLIEPMKAFHWGKDV-SIENLHQGYTH 62

Query: 236 VFVMTFASAEDLAACMSHEKHSAFAATFMAALDKVVVMDF 355
           +F  TF S E +A  ++H  H  FA  F+ +LDKV+V+D+
Sbjct: 63  IFESTFESKEAVAEYIAHPAHVEFATIFLGSLDKVLVIDY 102



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>Q45539:CSBB_BACSU Putative glycosyltransferase csbB - Bacillus subtilis|
          Length = 329

 Score = 33.9 bits (76), Expect = 0.59
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +2

Query: 119 VDDIIQELTKLAAELDTVKYFGWGKDVLNQEALTQGFTHV 238
           VDD +Q++  LAA    VKY  + ++   + A+  GF HV
Sbjct: 47  VDDTLQQIKDLAATCSRVKYISFSRNFGKEAAILAGFEHV 86



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>Q4PBL3:SET2_USTMA Histone-lysine N-methyltransferase, H3 lysine-36 specific -|
           Ustilago maydis (Smut fungus)
          Length = 972

 Score = 31.6 bits (70), Expect = 2.9
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
 Frame = -3

Query: 654 FKGRVDNQTTFQGNTRHYRLQSYRQLHQL---NTEATGQAEKGGSAAHVHQSCS 502
           + G V NQTTF    + YR++  R  + +     E     +KGG    ++ SC+
Sbjct: 275 YVGEVMNQTTFLQRMQQYRIEGIRHFYFMMLQPNEYLDATKKGGKGRFINHSCN 328



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>Q920R4:GASP1_RAT G-protein coupled receptor-associated sorting protein 1 - Rattus|
           norvegicus (Rat)
          Length = 1346

 Score = 30.4 bits (67), Expect = 6.5
 Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
 Frame = +2

Query: 8   KQSHRPEREERKEKASCLWAMGEFKHLCMAKFKEGVVVDDIIQELTKLAAE-LDTVKYFG 184
           ++  +PE EE     S  WA  E +    AK KE            K+A E  DTV  + 
Sbjct: 763 REESKPEAEEEDIIGSWFWAGDEDRFQPAAKIKEE----------NKIAPEDEDTVGSWF 812

Query: 185 WGKDVLNQEALTQG 226
           WGK+  + EA+  G
Sbjct: 813 WGKEEASVEAVKGG 826



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>Q5U4C1:GASP1_MOUSE G-protein coupled receptor-associated sorting protein 1 - Mus|
           musculus (Mouse)
          Length = 1347

 Score = 30.4 bits (67), Expect = 6.5
 Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
 Frame = +2

Query: 8   KQSHRPEREERKEKASCLWAMGEFKHLCMAKFKEGVVVDDIIQELTKLAAE-LDTVKYFG 184
           ++  RPE EE     S  WA  E +    AK          I E  K+A+E  DTV  + 
Sbjct: 763 REEFRPEAEEEDIIGSWFWAGDEDRFEPAAK----------INEENKIASEDEDTVGSWF 812

Query: 185 WGKDVLNQEALTQG 226
           WG +  + EA+ +G
Sbjct: 813 WGNEEASLEAVRRG 826



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>Q9RUG2:DNAJ_DEIRA Chaperone protein dnaJ - Deinococcus radiodurans|
          Length = 376

 Score = 30.0 bits (66), Expect = 8.5
 Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
 Frame = +1

Query: 187 GQGRAEPGGAHAGLHPRLRDDVRQRRGPGGVHEP*ETLCVCRHLHG-RTRQGGRHGLPLS 363
           G+GR  P      L   +R  + Q R    V    + L  C H HG RT  GG+  +  S
Sbjct: 108 GRGRRGPARGD-DLETEVRITLEQARAGEEVEVTVDRLTECEHCHGTRTEPGGKPPVTCS 166

Query: 364 LCQAGAA 384
            C    A
Sbjct: 167 TCNGSGA 173


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 106,487,041
Number of extensions: 2199955
Number of successful extensions: 5532
Number of sequences better than 10.0: 7
Number of HSP's gapped: 5526
Number of HSP's successfully gapped: 7
Length of query: 228
Length of database: 100,686,439
Length adjustment: 109
Effective length of query: 119
Effective length of database: 70,788,284
Effective search space: 8423805796
Effective search space used: 8423805796
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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