ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf145e12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY596570.1| Saccharum officinarum clone SCEPLR1051E09, complete sequence Length = 762 Score = 143 bits (72), Expect = 9e-31 Identities = 153/180 (85%) Strand = Plus / Minus Query: 179 ttcgggtggggcaaggacgtgctgaaccaggaggcgctcacgcagggcttcacccacgtc 238 |||| ||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 543 ttcgagtggggccaggacgtgctgaaccaggagatgctgacgcagggcttcacccacgtc 484 Query: 239 ttcgtgatgacgttcgccagcgccgaggacctggcggcgtgcatgagccatgagaaacac 298 ||| | |||| |||||| |||||| |||||| | || | |||| |||| || | ||| Sbjct: 483 ttctcgctgaccttcgcctccgccgacgacctgacagcctacatgggccacgacaggcac 424 Query: 299 tctgcgtttgccgccaccttcatggccgcactcgacaaggtggtcgtcatggacttcccc 358 | || || |||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 423 gccgccttcgccgccaccttcatggccgcgctcgacaaggtggtcgtcatcgacttcccc 364 Score = 56.0 bits (28), Expect = 2e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 64 ggccatgggggagttcaagcacctttgcatggccaagttcaaggaaggcgtcgtggtgga 123 ||||||||||||| | |||||||| ||| ||| ||||||||||| ||||| |||||||| Sbjct: 658 ggccatgggggaggtgaagcacctgtgcctggtgaagttcaaggagggcgtggtggtgga 599
>gb|AY107988.1| Zea mays PCO086949 mRNA sequence Length = 861 Score = 117 bits (59), Expect = 5e-23 Identities = 146/175 (83%) Strand = Plus / Plus Query: 67 catgggggagttcaagcacctttgcatggccaagttcaaggaaggcgtcgtggtggacga 126 |||||||||| | |||||||| ||| |||||||||||||||| ||||||||||||||||| Sbjct: 284 catgggggaggtgaagcacctgtgcctggccaagttcaaggacggcgtcgtggtggacga 343 Query: 127 catcatccaggagctcaccaagctcgccgcggagctcgacaccgtcaaatacttcgggtg 186 | | || ||| | ||| | |||||||| | | | ||||| ||||| | |||| ||| Sbjct: 344 cgtgctcaagggcatgaccgacctcgccgccgggatggacacggtcaagtctttcgagtg 403 Query: 187 gggcaaggacgtgctgaaccaggaggcgctcacgcagggcttcacccacgtcttc 241 |||| |||||||||||||||||||| ||| |||||||||||||| ||||||||| Sbjct: 404 gggccaggacgtgctgaaccaggagatgctgacgcagggcttcacgcacgtcttc 458 Score = 61.9 bits (31), Expect = 3e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 308 gccgccaccttcatggccgcactcgacaaggtggtcgtcatggacttcccc 358 |||||||||||||||||||| ||||||||||| ||||| | ||||||||| Sbjct: 525 gccgccaccttcatggccgccatcgacaaggtgctcgtcgtcgacttcccc 575
>emb|CT830643.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA002O23, full insert sequence Length = 710 Score = 77.8 bits (39), Expect = 5e-11 Identities = 228/291 (78%) Strand = Plus / Plus Query: 68 atgggggagttcaagcacctttgcatggccaagttcaaggaaggcgtcgtggtggacgac 127 ||||||||| ||||||| |||||| ||| ||||||||||||| ||| ||||||| ||| Sbjct: 89 atgggggaggtcaagcatctttgcctggtgaagttcaaggaagaggtcttggtggatgac 148 Query: 128 atcatccaggagctcaccaagctcgccgcggagctcgacaccgtcaaatacttcgggtgg 187 ||| | || | | |||||||| | | ||||| | |||| || |||| ||||| |||| Sbjct: 149 atcctgcaaggcatgaccaagcttgtctcggagatggacatggtgaaatccttcgagtgg 208 Query: 188 ggcaaggacgtgctgaaccaggaggcgctcacgcagggcttcacccacgtcttcgtgatg 247 || ||||| ||| ||||||||||| ||| || ||||||||||| || |||||| | || Sbjct: 209 gggaaggatgtgttgaaccaggagatgctgacacagggcttcactcatgtcttctcgctg 268 Query: 248 acgttcgccagcgccgaggacctggcggcgtgcatgagccatgagaaacactctgcgttt 307 || ||||| ||| | || || ||| || | | ||||||||| |||| |||| | ||| Sbjct: 269 accttcgcgagctctgaagatctgacgacctacatgagccacgagagacaccaggagttc 328 Query: 308 gccgccaccttcatggccgcactcgacaaggtggtcgtcatggacttcccc 358 |||| ||| |||||||| || |||||||||| |||||| | ||||||||| Sbjct: 329 gccggcacgttcatggcggcgatcgacaaggtcgtcgtcgtcgacttcccc 379
>emb|CT830642.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA059K10, full insert sequence Length = 713 Score = 77.8 bits (39), Expect = 5e-11 Identities = 228/291 (78%) Strand = Plus / Plus Query: 68 atgggggagttcaagcacctttgcatggccaagttcaaggaaggcgtcgtggtggacgac 127 ||||||||| ||||||| |||||| ||| ||||||||||||| ||| ||||||| ||| Sbjct: 92 atgggggaggtcaagcatctttgcctggtgaagttcaaggaagaggtcttggtggatgac 151 Query: 128 atcatccaggagctcaccaagctcgccgcggagctcgacaccgtcaaatacttcgggtgg 187 ||| | || | | |||||||| | | ||||| | |||| || |||| ||||| |||| Sbjct: 152 atcctgcaaggcatgaccaagcttgtctcggagatggacatggtgaaatccttcgagtgg 211 Query: 188 ggcaaggacgtgctgaaccaggaggcgctcacgcagggcttcacccacgtcttcgtgatg 247 || ||||| ||| ||||||||||| ||| || ||||||||||| || |||||| | || Sbjct: 212 gggaaggatgtgttgaaccaggagatgctgacacagggcttcactcatgtcttctcgctg 271 Query: 248 acgttcgccagcgccgaggacctggcggcgtgcatgagccatgagaaacactctgcgttt 307 || ||||| ||| | || || ||| || | | ||||||||| |||| |||| | ||| Sbjct: 272 accttcgcgagctctgaagatctgacgacctacatgagccacgagagacaccaggagttc 331 Query: 308 gccgccaccttcatggccgcactcgacaaggtggtcgtcatggacttcccc 358 |||| ||| |||||||| || |||||||||| |||||| | ||||||||| Sbjct: 332 gccggcacgttcatggcggcgatcgacaaggtcgtcgtcgtcgacttcccc 382
>ref|NM_001072292.1| Oryza sativa (japonica cultivar-group) Os11g0150400 (Os11g0150400) mRNA, complete cds Length = 712 Score = 77.8 bits (39), Expect = 5e-11 Identities = 228/291 (78%) Strand = Plus / Plus Query: 68 atgggggagttcaagcacctttgcatggccaagttcaaggaaggcgtcgtggtggacgac 127 ||||||||| ||||||| |||||| ||| ||||||||||||| ||| ||||||| ||| Sbjct: 91 atgggggaggtcaagcatctttgcctggtgaagttcaaggaagaggtcttggtggatgac 150 Query: 128 atcatccaggagctcaccaagctcgccgcggagctcgacaccgtcaaatacttcgggtgg 187 ||| | || | | |||||||| | | ||||| | |||| || |||| ||||| |||| Sbjct: 151 atcctgcaaggcatgaccaagcttgtctcggagatggacatggtgaaatccttcgagtgg 210 Query: 188 ggcaaggacgtgctgaaccaggaggcgctcacgcagggcttcacccacgtcttcgtgatg 247 || ||||| ||| ||||||||||| ||| || ||||||||||| || |||||| | || Sbjct: 211 gggaaggatgtgttgaaccaggagatgctgacacagggcttcactcatgtcttctcgctg 270 Query: 248 acgttcgccagcgccgaggacctggcggcgtgcatgagccatgagaaacactctgcgttt 307 || ||||| ||| | || || ||| || | | ||||||||| |||| |||| | ||| Sbjct: 271 accttcgcgagctctgaagatctgacgacctacatgagccacgagagacaccaggagttc 330 Query: 308 gccgccaccttcatggccgcactcgacaaggtggtcgtcatggacttcccc 358 |||| ||| |||||||| || |||||||||| |||||| | ||||||||| Sbjct: 331 gccggcacgttcatggcggcgatcgacaaggtcgtcgtcgtcgacttcccc 381
>dbj|AK099186.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101N09, full insert sequence Length = 700 Score = 77.8 bits (39), Expect = 5e-11 Identities = 228/291 (78%) Strand = Plus / Plus Query: 68 atgggggagttcaagcacctttgcatggccaagttcaaggaaggcgtcgtggtggacgac 127 ||||||||| ||||||| |||||| ||| ||||||||||||| ||| ||||||| ||| Sbjct: 89 atgggggaggtcaagcatctttgcctggtgaagttcaaggaagaggtcttggtggatgac 148 Query: 128 atcatccaggagctcaccaagctcgccgcggagctcgacaccgtcaaatacttcgggtgg 187 ||| | || | | |||||||| | | ||||| | |||| || |||| ||||| |||| Sbjct: 149 atcctgcaaggcatgaccaagcttgtctcggagatggacatggtgaaatccttcgagtgg 208 Query: 188 ggcaaggacgtgctgaaccaggaggcgctcacgcagggcttcacccacgtcttcgtgatg 247 || ||||| ||| ||||||||||| ||| || ||||||||||| || |||||| | || Sbjct: 209 gggaaggatgtgttgaaccaggagatgctgacacagggcttcactcatgtcttctcgctg 268 Query: 248 acgttcgccagcgccgaggacctggcggcgtgcatgagccatgagaaacactctgcgttt 307 || ||||| ||| | || || ||| || | | ||||||||| |||| |||| | ||| Sbjct: 269 accttcgcgagctctgaagatctgacgacctacatgagccacgagagacaccaggagttc 328 Query: 308 gccgccaccttcatggccgcactcgacaaggtggtcgtcatggacttcccc 358 |||| ||| |||||||| || |||||||||| |||||| | ||||||||| Sbjct: 329 gccggcacgttcatggcggcgatcgacaaggtcgtcgtcgtcgacttcccc 379
>dbj|AK058243.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-H08, full insert sequence Length = 712 Score = 77.8 bits (39), Expect = 5e-11 Identities = 228/291 (78%) Strand = Plus / Plus Query: 68 atgggggagttcaagcacctttgcatggccaagttcaaggaaggcgtcgtggtggacgac 127 ||||||||| ||||||| |||||| ||| ||||||||||||| ||| ||||||| ||| Sbjct: 91 atgggggaggtcaagcatctttgcctggtgaagttcaaggaagaggtcttggtggatgac 150 Query: 128 atcatccaggagctcaccaagctcgccgcggagctcgacaccgtcaaatacttcgggtgg 187 ||| | || | | |||||||| | | ||||| | |||| || |||| ||||| |||| Sbjct: 151 atcctgcaaggcatgaccaagcttgtctcggagatggacatggtgaaatccttcgagtgg 210 Query: 188 ggcaaggacgtgctgaaccaggaggcgctcacgcagggcttcacccacgtcttcgtgatg 247 || ||||| ||| ||||||||||| ||| || ||||||||||| || |||||| | || Sbjct: 211 gggaaggatgtgttgaaccaggagatgctgacacagggcttcactcatgtcttctcgctg 270 Query: 248 acgttcgccagcgccgaggacctggcggcgtgcatgagccatgagaaacactctgcgttt 307 || ||||| ||| | || || ||| || | | ||||||||| |||| |||| | ||| Sbjct: 271 accttcgcgagctctgaagatctgacgacctacatgagccacgagagacaccaggagttc 330 Query: 308 gccgccaccttcatggccgcactcgacaaggtggtcgtcatggacttcccc 358 |||| ||| |||||||| || |||||||||| |||||| | ||||||||| Sbjct: 331 gccggcacgttcatggcggcgatcgacaaggtcgtcgtcgtcgacttcccc 381
>gb|DQ427954.1| Sorghum propinquum locus pHER1E07 genomic sequence Length = 421 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 192 aggacgtgctgaaccaggaggcgctcacgcagggcttcacccacgtcttc 241 |||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 370 aggacgtgctgaaccaggagatgctgacgcagggcttcacccacgtcttc 419
>gb|DQ427953.1| Sorghum bicolor voucher PI585454 locus pHER1E07 genomic sequence Length = 503 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 192 aggacgtgctgaaccaggaggcgctcacgcagggcttcacccacgtcttc 241 |||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 452 aggacgtgctgaaccaggagatgctgacgcagggcttcacccacgtcttc 501
>gb|DQ427952.1| Sorghum bicolor voucher PI267539 locus pHER1E07 genomic sequence Length = 421 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 192 aggacgtgctgaaccaggaggcgctcacgcagggcttcacccacgtcttc 241 |||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 370 aggacgtgctgaaccaggagatgctgacgcagggcttcacccacgtcttc 419
>gb|DQ427951.1| Sorghum bicolor voucher PI267408 locus pHER1E07 genomic sequence Length = 421 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 192 aggacgtgctgaaccaggaggcgctcacgcagggcttcacccacgtcttc 241 |||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 370 aggacgtgctgaaccaggagatgctgacgcagggcttcacccacgtcttc 419
>gb|DQ427950.1| Sorghum bicolor voucher PI221607 locus pHER1E07 genomic sequence Length = 421 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 192 aggacgtgctgaaccaggaggcgctcacgcagggcttcacccacgtcttc 241 |||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 370 aggacgtgctgaaccaggagatgctgacgcagggcttcacccacgtcttc 419
>gb|DQ427949.1| Sorghum bicolor voucher PI152702 locus pHER1E07 genomic sequence Length = 421 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 192 aggacgtgctgaaccaggaggcgctcacgcagggcttcacccacgtcttc 241 |||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 370 aggacgtgctgaaccaggagatgctgacgcagggcttcacccacgtcttc 419
>gb|DQ427948.1| Sorghum bicolor voucher NSL92371 locus pHER1E07 genomic sequence Length = 421 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 192 aggacgtgctgaaccaggaggcgctcacgcagggcttcacccacgtcttc 241 |||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 370 aggacgtgctgaaccaggagatgctgacgcagggcttcacccacgtcttc 419
>gb|DQ427947.1| Sorghum bicolor voucher NSL87666 locus pHER1E07 genomic sequence Length = 421 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 192 aggacgtgctgaaccaggaggcgctcacgcagggcttcacccacgtcttc 241 |||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 370 aggacgtgctgaaccaggagatgctgacgcagggcttcacccacgtcttc 419
>gb|DQ427946.1| Sorghum bicolor voucher NSL77217 locus pHER1E07 genomic sequence Length = 421 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 192 aggacgtgctgaaccaggaggcgctcacgcagggcttcacccacgtcttc 241 |||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 370 aggacgtgctgaaccaggagatgctgacgcagggcttcacccacgtcttc 419
>gb|DQ427945.1| Sorghum bicolor voucher NSL77034 locus pHER1E07 genomic sequence Length = 421 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 192 aggacgtgctgaaccaggaggcgctcacgcagggcttcacccacgtcttc 241 |||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 370 aggacgtgctgaaccaggagatgctgacgcagggcttcacccacgtcttc 419
>gb|DQ427944.1| Sorghum bicolor voucher NSL56174 locus pHER1E07 genomic sequence Length = 421 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 192 aggacgtgctgaaccaggaggcgctcacgcagggcttcacccacgtcttc 241 |||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 370 aggacgtgctgaaccaggagatgctgacgcagggcttcacccacgtcttc 419
>gb|DQ427943.1| Sorghum bicolor voucher NSL56003 locus pHER1E07 genomic sequence Length = 421 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 192 aggacgtgctgaaccaggaggcgctcacgcagggcttcacccacgtcttc 241 |||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 370 aggacgtgctgaaccaggagatgctgacgcagggcttcacccacgtcttc 419
>gb|DQ427942.1| Sorghum bicolor voucher NSL55243 locus pHER1E07 genomic sequence Length = 421 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 192 aggacgtgctgaaccaggaggcgctcacgcagggcttcacccacgtcttc 241 |||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 370 aggacgtgctgaaccaggagatgctgacgcagggcttcacccacgtcttc 419
>gb|DQ427941.1| Sorghum bicolor voucher NSL51365 locus pHER1E07 genomic sequence Length = 421 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 192 aggacgtgctgaaccaggaggcgctcacgcagggcttcacccacgtcttc 241 |||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 370 aggacgtgctgaaccaggagatgctgacgcagggcttcacccacgtcttc 419
>gb|DQ427940.1| Sorghum bicolor voucher NSL51030 locus pHER1E07 genomic sequence Length = 421 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 192 aggacgtgctgaaccaggaggcgctcacgcagggcttcacccacgtcttc 241 |||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 370 aggacgtgctgaaccaggagatgctgacgcagggcttcacccacgtcttc 419
>gb|DQ427939.1| Sorghum bicolor voucher NSL50875 locus pHER1E07 genomic sequence Length = 421 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 192 aggacgtgctgaaccaggaggcgctcacgcagggcttcacccacgtcttc 241 |||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 370 aggacgtgctgaaccaggagatgctgacgcagggcttcacccacgtcttc 419
>gb|DQ427938.1| Sorghum bicolor voucher BTx623 locus pHER1E07 genomic sequence Length = 421 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 192 aggacgtgctgaaccaggaggcgctcacgcagggcttcacccacgtcttc 241 |||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 370 aggacgtgctgaaccaggagatgctgacgcagggcttcacccacgtcttc 419
>ref|NM_001072291.1| Oryza sativa (japonica cultivar-group) Os11g0150300 (Os11g0150300) mRNA, complete cds Length = 1049 Score = 54.0 bits (27), Expect = 7e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 68 atgggggagttcaagcacctttgcatggccaagttcaaggaaggcgtcgtggtggacgac 127 ||||||||| ||||||| |||||| ||| ||||||||||||| ||| ||||||| ||| Sbjct: 962 atgggggaggtcaagcatctttgcctggtgaagttcaaggaagaggtcttggtggatgac 903 Query: 128 atc 130 ||| Sbjct: 902 atc 900 Score = 50.1 bits (25), Expect = 0.011 Identities = 136/173 (78%) Strand = Plus / Minus Query: 186 ggggcaaggacgtgctgaaccaggaggcgctcacgcagggcttcacccacgtcttcgtga 245 |||| ||||| ||| ||||||||||| ||| || ||||||||||| || |||||| | Sbjct: 504 gggggaaggatgtgttgaaccaggagatgctgacacagggcttcactcatgtcttctcgc 445 Query: 246 tgacgttcgccagcgccgaggacctggcggcgtgcatgagccatgagaaacactctgcgt 305 |||| ||||| ||| | || || ||| || | | ||||||||| |||| |||| | || Sbjct: 444 tgaccttcgcgagctctgaagatctgacgacctacatgagccacgagagacaccaggagt 385 Query: 306 ttgccgccaccttcatggccgcactcgacaaggtggtcgtcatggacttcccc 358 | |||| ||| |||||||| || |||||||||| |||||| | ||||||||| Sbjct: 384 tcgccggcacgttcatggcggcgatcgacaaggtcgtcgtcgtcgacttcccc 332
>gb|AC120307.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0074E19 map R1938, complete sequence Length = 160847 Score = 54.0 bits (27), Expect = 7e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 68 atgggggagttcaagcacctttgcatggccaagttcaaggaaggcgtcgtggtggacgac 127 ||||||||| ||||||| |||||| ||| ||||||||||||| ||| ||||||| ||| Sbjct: 103347 atgggggaggtcaagcatctttgcctggtgaagttcaaggaagaggtcttggtggatgac 103288 Query: 128 atc 130 ||| Sbjct: 103287 atc 103285 Score = 50.1 bits (25), Expect = 0.011 Identities = 136/173 (78%) Strand = Plus / Minus Query: 186 ggggcaaggacgtgctgaaccaggaggcgctcacgcagggcttcacccacgtcttcgtga 245 |||| ||||| ||| ||||||||||| ||| || ||||||||||| || |||||| | Sbjct: 102889 gggggaaggatgtgttgaaccaggagatgctgacacagggcttcactcatgtcttctcgc 102830 Query: 246 tgacgttcgccagcgccgaggacctggcggcgtgcatgagccatgagaaacactctgcgt 305 |||| ||||| ||| | || || ||| || | | ||||||||| |||| |||| | || Sbjct: 102829 tgaccttcgcgagctctgaagatctgacgacctacatgagccacgagagacaccaggagt 102770 Query: 306 ttgccgccaccttcatggccgcactcgacaaggtggtcgtcatggacttcccc 358 | |||| ||| |||||||| || |||||||||| |||||| | ||||||||| Sbjct: 102769 tcgccggcacgttcatggcggcgatcgacaaggtcgtcgtcgtcgacttcccc 102717
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 54.0 bits (27), Expect = 7e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 68 atgggggagttcaagcacctttgcatggccaagttcaaggaaggcgtcgtggtggacgac 127 ||||||||| ||||||| |||||| ||| ||||||||||||| ||| ||||||| ||| Sbjct: 2327348 atgggggaggtcaagcatctttgcctggtgaagttcaaggaagaggtcttggtggatgac 2327289 Query: 128 atc 130 ||| Sbjct: 2327288 atc 2327286 Score = 50.1 bits (25), Expect = 0.011 Identities = 136/173 (78%) Strand = Plus / Minus Query: 186 ggggcaaggacgtgctgaaccaggaggcgctcacgcagggcttcacccacgtcttcgtga 245 |||| ||||| ||| ||||||||||| ||| || ||||||||||| || |||||| | Sbjct: 2326890 gggggaaggatgtgttgaaccaggagatgctgacacagggcttcactcatgtcttctcgc 2326831 Query: 246 tgacgttcgccagcgccgaggacctggcggcgtgcatgagccatgagaaacactctgcgt 305 |||| ||||| ||| | || || ||| || | | ||||||||| |||| |||| | || Sbjct: 2326830 tgaccttcgcgagctctgaagatctgacgacctacatgagccacgagagacaccaggagt 2326771 Query: 306 ttgccgccaccttcatggccgcactcgacaaggtggtcgtcatggacttcccc 358 | |||| ||| |||||||| || |||||||||| |||||| | ||||||||| Sbjct: 2326770 tcgccggcacgttcatggcggcgatcgacaaggtcgtcgtcgtcgacttcccc 2326718
>dbj|AK061232.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-B02, full insert sequence Length = 1046 Score = 54.0 bits (27), Expect = 7e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 68 atgggggagttcaagcacctttgcatggccaagttcaaggaaggcgtcgtggtggacgac 127 ||||||||| ||||||| |||||| ||| ||||||||||||| ||| ||||||| ||| Sbjct: 88 atgggggaggtcaagcatctttgcctggtgaagttcaaggaagaggtcttggtggatgac 147 Query: 128 atc 130 ||| Sbjct: 148 atc 150 Score = 50.1 bits (25), Expect = 0.011 Identities = 136/173 (78%) Strand = Plus / Plus Query: 186 ggggcaaggacgtgctgaaccaggaggcgctcacgcagggcttcacccacgtcttcgtga 245 |||| ||||| ||| ||||||||||| ||| || ||||||||||| || |||||| | Sbjct: 546 gggggaaggatgtgttgaaccaggagatgctgacacagggcttcactcatgtcttctcgc 605 Query: 246 tgacgttcgccagcgccgaggacctggcggcgtgcatgagccatgagaaacactctgcgt 305 |||| ||||| ||| | || || ||| || | | ||||||||| |||| |||| | || Sbjct: 606 tgaccttcgcgagctctgaagatctgacgacctacatgagccacgagagacaccaggagt 665 Query: 306 ttgccgccaccttcatggccgcactcgacaaggtggtcgtcatggacttcccc 358 | |||| ||| |||||||| || |||||||||| |||||| | ||||||||| Sbjct: 666 tcgccggcacgttcatggcggcgatcgacaaggtcgtcgtcgtcgacttcccc 718
>gb|AY019901.1| Oryza sativa microsatellite MRG2226 containing (CT)X12, closest to marker C460, genomic sequence Length = 224 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 423 atttttgaaacgggggcaaaagctttgcctc 453 |||||||||| | |||||||||||||||||| Sbjct: 34 atttttgaaaagagggcaaaagctttgcctc 4
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 423 atttttgaaacgggggcaaaagctttgcctc 453 |||||||||| | |||||||||||||||||| Sbjct: 24144096 atttttgaaaagagggcaaaagctttgcctc 24144066
>gb|AC119418.5| Medicago truncatula clone mth1-23l16, complete sequence Length = 112695 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 32 gaagagagaaaagagaaagctag 54 ||||||||||||||||||||||| Sbjct: 37601 gaagagagaaaagagaaagctag 37623
>gb|AC130839.4| Mus musculus BAC clone RP24-439L9 from Y, complete sequence Length = 148806 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 29 agggaagagagaaaagagaaagc 51 ||||||||||||||||||||||| Sbjct: 94136 agggaagagagaaaagagaaagc 94158 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 ggaagagagaaaagagaaagc 51 ||||||||||||||||||||| Sbjct: 55360 ggaagagagaaaagagaaagc 55380 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 ggaagagagaaaagagaaagc 51 ||||||||||||||||||||| Sbjct: 125654 ggaagagagaaaagagaaagc 125674
>emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310_C03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132733 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 423 atttttgaaacgggggcaaaagctttgcctc 453 |||||||||| | |||||||||||||||||| Sbjct: 28787 atttttgaaaagagggcaaaagctttgcctc 28757
>emb|CT009588.1| Triticum turgidum Length = 136372 Score = 44.1 bits (22), Expect = 0.65 Identities = 28/30 (93%) Strand = Plus / Plus Query: 424 tttttgaaacgggggcaaaagctttgcctc 453 |||||||||||| |||||||| |||||||| Sbjct: 79690 tttttgaaacggaggcaaaagatttgcctc 79719
>emb|CT009585.1| Triticum aestivum Length = 103189 Score = 44.1 bits (22), Expect = 0.65 Identities = 28/30 (93%) Strand = Plus / Plus Query: 424 tttttgaaacgggggcaaaagctttgcctc 453 |||||||||||| |||||||| |||||||| Sbjct: 45993 tttttgaaacggaggcaaaagatttgcctc 46022
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Minus Query: 235 cgtcttcgtgatgacgttcgcc 256 |||||||||||||||||||||| Sbjct: 1008717 cgtcttcgtgatgacgttcgcc 1008696
>gb|AC119291.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0052K01, complete sequence Length = 144395 Score = 44.1 bits (22), Expect = 0.65 Identities = 28/30 (93%) Strand = Plus / Minus Query: 424 tttttgaaacgggggcaaaagctttgcctc 453 ||||||||| | |||||||||||||||||| Sbjct: 86778 tttttgaaaggagggcaaaagctttgcctc 86749
>gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genomic sequence, complete sequence Length = 190055 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 agagggaagagagaaaagagaa 48 |||||||||||||||||||||| Sbjct: 86403 agagggaagagagaaaagagaa 86382
>gb|AC096691.6| Oryza sativa chromosome 10 BAC OSJNBa0083M08 genomic sequence, complete sequence Length = 106110 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 agagggaagagagaaaagagaa 48 |||||||||||||||||||||| Sbjct: 16640 agagggaagagagaaaagagaa 16619
>gb|AC113335.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OJ1003C07, from chromosome 10, complete sequence Length = 115188 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 agagggaagagagaaaagagaa 48 |||||||||||||||||||||| Sbjct: 107465 agagggaagagagaaaagagaa 107444
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Plus Query: 27 agagggaagagagaaaagagaa 48 |||||||||||||||||||||| Sbjct: 11051596 agagggaagagagaaaagagaa 11051617
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 44.1 bits (22), Expect = 0.65 Identities = 28/30 (93%) Strand = Plus / Plus Query: 424 tttttgaaacgggggcaaaagctttgcctc 453 ||||||||| | |||||||||||||||||| Sbjct: 23121961 tttttgaaaggagggcaaaagctttgcctc 23121990
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Plus Query: 27 agagggaagagagaaaagagaa 48 |||||||||||||||||||||| Sbjct: 5545710 agagggaagagagaaaagagaa 5545731 Score = 44.1 bits (22), Expect = 0.65 Identities = 28/30 (93%) Strand = Plus / Minus Query: 424 tttttgaaacgggggcaaaagctttgcctc 453 ||||||||| | |||||||||||||||||| Sbjct: 27206700 tttttgaaaggagggcaaaagctttgcctc 27206671
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 44.1 bits (22), Expect = 0.65 Identities = 28/30 (93%) Strand = Plus / Minus Query: 424 tttttgaaacgggggcaaaagctttgcctc 453 ||||||||| | |||||||||||||||||| Sbjct: 26573303 tttttgaaaggagggcaaaagctttgcctc 26573274
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 44.1 bits (22), Expect = 0.65 Identities = 28/30 (93%) Strand = Plus / Minus Query: 424 tttttgaaacgggggcaaaagctttgcctc 453 ||||||||| | |||||||||||||||||| Sbjct: 29327008 tttttgaaaggagggcaaaagctttgcctc 29326979
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 44.1 bits (22), Expect = 0.65 Identities = 28/30 (93%) Strand = Plus / Plus Query: 424 tttttgaaacgggggcaaaagctttgcctc 453 ||||||||| | |||||||||||||||||| Sbjct: 164690 tttttgaaaggagggcaaaagctttgcctc 164719 Score = 44.1 bits (22), Expect = 0.65 Identities = 28/30 (93%) Strand = Plus / Plus Query: 424 tttttgaaacgggggcaaaagctttgcctc 453 ||||||||| | |||||||||||||||||| Sbjct: 985942 tttttgaaaggagggcaaaagctttgcctc 985971 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Plus Query: 27 agagggaagagagaaaagagaa 48 |||||||||||||||||||||| Sbjct: 3726193 agagggaagagagaaaagagaa 3726214 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Plus Query: 27 agagggaagagagaaaagagaa 48 |||||||||||||||||||||| Sbjct: 19679959 agagggaagagagaaaagagaa 19679980 Score = 44.1 bits (22), Expect = 0.65 Identities = 28/30 (93%) Strand = Plus / Minus Query: 424 tttttgaaacgggggcaaaagctttgcctc 453 ||||||||| | |||||||||||||||||| Sbjct: 25373543 tttttgaaaggagggcaaaagctttgcctc 25373514
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 agagggaagagagaaaagagaa 48 |||||||||||||||||||||| Sbjct: 21386521 agagggaagagagaaaagagaa 21386500
>emb|AL606688.3|OSJN00086 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064M23, complete sequence Length = 149892 Score = 44.1 bits (22), Expect = 0.65 Identities = 28/30 (93%) Strand = Plus / Minus Query: 424 tttttgaaacgggggcaaaagctttgcctc 453 ||||||||| | |||||||||||||||||| Sbjct: 130054 tttttgaaaggagggcaaaagctttgcctc 130025
>dbj|AP004693.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0461F06 Length = 147891 Score = 44.1 bits (22), Expect = 0.65 Identities = 28/30 (93%) Strand = Plus / Plus Query: 424 tttttgaaacgggggcaaaagctttgcctc 453 ||||||||| | |||||||||||||||||| Sbjct: 45060 tttttgaaaggagggcaaaagctttgcctc 45089
>dbj|AP003633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0637D03 Length = 180159 Score = 44.1 bits (22), Expect = 0.65 Identities = 28/30 (93%) Strand = Plus / Minus Query: 424 tttttgaaacgggggcaaaagctttgcctc 453 ||||||||| | |||||||||||||||||| Sbjct: 63716 tttttgaaaggagggcaaaagctttgcctc 63687
>dbj|AP004758.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0664C05 Length = 165354 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Plus Query: 27 agagggaagagagaaaagagaa 48 |||||||||||||||||||||| Sbjct: 92618 agagggaagagagaaaagagaa 92639
>dbj|AP005798.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1136H02 Length = 145086 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Plus Query: 27 agagggaagagagaaaagagaa 48 |||||||||||||||||||||| Sbjct: 36717 agagggaagagagaaaagagaa 36738
>dbj|AP006452.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1250G12 Length = 144590 Score = 44.1 bits (22), Expect = 0.65 Identities = 28/30 (93%) Strand = Plus / Minus Query: 424 tttttgaaacgggggcaaaagctttgcctc 453 ||||||||| | |||||||||||||||||| Sbjct: 140694 tttttgaaaggagggcaaaagctttgcctc 140665
>dbj|AP005071.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0669G09 Length = 140067 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Plus Query: 27 agagggaagagagaaaagagaa 48 |||||||||||||||||||||| Sbjct: 66510 agagggaagagagaaaagagaa 66531
>dbj|AP004192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1643_A10 Length = 130037 Score = 44.1 bits (22), Expect = 0.65 Identities = 28/30 (93%) Strand = Plus / Minus Query: 424 tttttgaaacgggggcaaaagctttgcctc 453 ||||||||| | |||||||||||||||||| Sbjct: 29205 tttttgaaaggagggcaaaagctttgcctc 29176
>dbj|AP004084.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1217_F02 Length = 118822 Score = 44.1 bits (22), Expect = 0.65 Identities = 28/30 (93%) Strand = Plus / Plus Query: 424 tttttgaaacgggggcaaaagctttgcctc 453 ||||||||| | |||||||||||||||||| Sbjct: 57361 tttttgaaaggagggcaaaagctttgcctc 57390
>dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1435_F07 Length = 139041 Score = 44.1 bits (22), Expect = 0.65 Identities = 28/30 (93%) Strand = Plus / Plus Query: 424 tttttgaaacgggggcaaaagctttgcctc 453 ||||||||| | |||||||||||||||||| Sbjct: 113717 tttttgaaaggagggcaaaagctttgcctc 113746
>dbj|AB076182.1| Oncorhynchus keta mRNA for myosin heavy chain, complete cds Length = 5994 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Plus Query: 118 ggtggacgacatcatccaggag 139 |||||||||||||||||||||| Sbjct: 5277 ggtggacgacatcatccaggag 5298
>dbj|AB024929.1| Oncorhynchus keta mRNA for myosin heavy chain, partial cds Length = 1256 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Plus Query: 118 ggtggacgacatcatccaggag 139 |||||||||||||||||||||| Sbjct: 559 ggtggacgacatcatccaggag 580
>emb|AL627206.20| Mouse DNA sequence from clone RP23-206H22 on chromosome 4, complete sequence Length = 158781 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 agggaagagagaaaagagaaag 50 |||||||||||||||||||||| Sbjct: 59217 agggaagagagaaaagagaaag 59238
>ref|XM_001213311.1| Aspergillus terreus NIH2624 hypothetical protein (ATEG_04133) mRNA, complete cds Length = 2130 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 tccaggagctcaccaagctcg 152 ||||||||||||||||||||| Sbjct: 131 tccaggagctcaccaagctcg 111
>ref|XM_509416.2| PREDICTED: Pan troglodytes similar to KIAA1853 protein (LOC452294), mRNA Length = 8594 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 523 agcggccgagcctcctttctctgct 547 ||||| ||||||||||||||||||| Sbjct: 316 agcggacgagcctcctttctctgct 340
>emb|CR974583.24| Mouse DNA sequence from clone RP23-118G7 on chromosome 12, complete sequence Length = 219072 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 agagggaagagagaaaagaga 47 ||||||||||||||||||||| Sbjct: 25695 agagggaagagagaaaagaga 25715
>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome Length = 2575032 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 425 ttttgaaacgggggcaaaagctttg 449 ||||||||||||| ||||||||||| Sbjct: 57084 ttttgaaacggggtcaaaagctttg 57108
>gb|AC163691.4| Mus musculus BAC clone RP24-1D8 from chromosome y, complete sequence Length = 165543 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 ggaagagagaaaagagaaagc 51 ||||||||||||||||||||| Sbjct: 567 ggaagagagaaaagagaaagc 587 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 ggaagagagaaaagagaaagc 51 ||||||||||||||||||||| Sbjct: 57600 ggaagagagaaaagagaaagc 57620
>gb|AC107757.15| Mus musculus chromosome 15, clone RP23-207L14, complete sequence Length = 208483 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 gagggaagagagaaaagagaa 48 ||||||||||||||||||||| Sbjct: 75797 gagggaagagagaaaagagaa 75817
>gb|AC141873.4| Mus musculus BAC clone RP24-332J21 from chromosome Y, complete sequence Length = 160015 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 ggaagagagaaaagagaaagc 51 ||||||||||||||||||||| Sbjct: 137130 ggaagagagaaaagagaaagc 137110
>gb|AC120383.7| Mus musculus chromosome 12, clone RP24-273A7, complete sequence Length = 216796 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 agagggaagagagaaaagaga 47 ||||||||||||||||||||| Sbjct: 23330 agagggaagagagaaaagaga 23310
>gb|AC132601.4| Mus musculus BAC clone RP24-165F4 from chromosome Y, complete sequence Length = 186363 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 ggaagagagaaaagagaaagc 51 ||||||||||||||||||||| Sbjct: 84926 ggaagagagaaaagagaaagc 84906 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 ggaagagagaaaagagaaagc 51 ||||||||||||||||||||| Sbjct: 156929 ggaagagagaaaagagaaagc 156949
>gb|AC122287.4| Mus musculus BAC clone RP23-253A15 from 1, complete sequence Length = 226926 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 26 gagagggaagagagaaaagagaaag 50 |||||||||||||||||||| |||| Sbjct: 44103 gagagggaagagagaaaagaaaaag 44079
>gb|AC112504.6| Homo sapiens 3 BAC RP11-271K21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 215077 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 agagggaagagagaaaagaga 47 ||||||||||||||||||||| Sbjct: 126807 agagggaagagagaaaagaga 126827
>gb|AC115709.11| Mus musculus chromosome 12, clone RP23-76M3, complete sequence Length = 193170 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 agagggaagagagaaaagaga 47 ||||||||||||||||||||| Sbjct: 30914 agagggaagagagaaaagaga 30934
>ref|NM_194286.2| Homo sapiens KIAA1853 (KIAA1853), mRNA Length = 8382 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 523 agcggccgagcctcctttctctgct 547 ||||| ||||||||||||||||||| Sbjct: 95 agcggacgagcctcctttctctgct 119
>emb|CR759953.10| Zebrafish DNA sequence from clone DKEY-68D15 in linkage group 7, complete sequence Length = 162332 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 414 ccaataactatttttgaaacg 434 ||||||||||||||||||||| Sbjct: 46230 ccaataactatttttgaaacg 46250
>gb|AF493787.1| Oryza sativa phosphate transporter (Pht1-1) gene, complete cds Length = 5543 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 agagggaagagagaaaagaga 47 ||||||||||||||||||||| Sbjct: 1553 agagggaagagagaaaagaga 1573
>gb|AC087885.17| Homo sapiens 12q BAC RP11-173C19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 100330 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 523 agcggccgagcctcctttctctgct 547 ||||| ||||||||||||||||||| Sbjct: 83363 agcggacgagcctcctttctctgct 83387
>gb|AC091609.2| Homo sapiens chromosome 1 clone RP11-109I2, complete sequence Length = 183521 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 25 ggagagggaagagagaaaagagaaa 49 ||||||| ||||||||||||||||| Sbjct: 26976 ggagaggaaagagagaaaagagaaa 27000
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 caaggacgtgctgaaccagga 210 ||||||||||||||||||||| Sbjct: 3707993 caaggacgtgctgaaccagga 3707973
>emb|BX571659.1| Wolinella succinogenes, complete genome; segment 3/7 Length = 349970 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 gctcacgcagggcttcaccca 234 ||||||||||||||||||||| Sbjct: 337116 gctcacgcagggcttcaccca 337136
>emb|AL645985.30| Mouse DNA sequence from clone DN-240H8 on chromosome 3 Contains part of a novel gene, a ribosomal protein L36 (Rpl36) pseudogene and a pseudogene similar to part of ribosomal protein S2 (Rps2), complete sequence Length = 141661 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 25 ggagagggaagagagaaaagagaaa 49 |||||||||| |||||||||||||| Sbjct: 96535 ggagagggaaaagagaaaagagaaa 96559
>gb|AC105312.2| Homo sapiens BAC clone RP11-17C4 from 4, complete sequence Length = 127437 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 638 tctactctacccttgaatgaa 658 ||||||||||||||||||||| Sbjct: 25177 tctactctacccttgaatgaa 25197
>gb|AC011286.7| Homo sapiens BAC clone RP11-4H21 from 2, complete sequence Length = 168863 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 25 ggagagggaagagagaaaagagaaa 49 |||||||||| |||||||||||||| Sbjct: 37323 ggagagggaatagagaaaagagaaa 37299
>gb|AC160967.4| Mus musculus BAC clone RP24-385N6 from chromosome y, complete sequence Length = 150231 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 ggaagagagaaaagagaaagc 51 ||||||||||||||||||||| Sbjct: 42296 ggaagagagaaaagagaaagc 42316
>gb|AC132589.4| Mus musculus BAC clone RP24-258M24 from 1, complete sequence Length = 168097 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 26 gagagggaagagagaaaagagaaag 50 |||||||||||||||||||| |||| Sbjct: 6942 gagagggaagagagaaaagaaaaag 6966
>emb|AL591433.6| Mouse DNA sequence from clone RP23-268N22 on chromosome 11, complete sequence Length = 203336 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 25 ggagagggaagagagaaaaga 45 ||||||||||||||||||||| Sbjct: 115002 ggagagggaagagagaaaaga 115022
>emb|AL732613.10| Mouse DNA sequence from clone RP23-193A21 on chromosome 4, complete sequence Length = 204012 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 agagggaagagagaaaagaga 47 ||||||||||||||||||||| Sbjct: 134309 agagggaagagagaaaagaga 134329
>gb|AC113507.12| Mus musculus chromosome 3, clone RP23-376O10, complete sequence Length = 210262 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 ggagagggaagagagaaaaga 45 ||||||||||||||||||||| Sbjct: 88330 ggagagggaagagagaaaaga 88310
>dbj|AB058756.1| Homo sapiens mRNA for KIAA1853 protein, partial cds Length = 5206 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 523 agcggccgagcctcctttctctgct 547 ||||| ||||||||||||||||||| Sbjct: 95 agcggacgagcctcctttctctgct 119 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 114,880,927 Number of extensions: 6406684 Number of successful extensions: 143046 Number of sequences better than 10.0: 88 Number of HSP's gapped: 143046 Number of HSP's successfully gapped: 110 Length of query: 686 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 664 Effective length of database: 18,508,616,841 Effective search space: 12289721582424 Effective search space used: 12289721582424 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
