ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf142o23 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF486634.1| Triticum aestivum ferredoxin precursor, mRNA, complete cds Length = 800 Score = 644 bits (325), Expect = 0.0 Identities = 424/457 (92%) Strand = Plus / Plus Query: 147 atgtcaaccgccactgctccaggagtgtcctttgctaaatctggggctggttcccgggcc 206 |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 136 atgtcaactgccactgctccaggagtgtcctttgctaaatccggggctggttcccgggcc 195 Query: 207 attgctccagcgatcaggaccccttccttcatcggttactcgaagcaaacgccaagcctg 266 ||||||| |||||||||| | ||||||||||||||||| | |||||| | |||| | || Sbjct: 196 gttgctccggcgatcaggagcgcttccttcatcggttacgccaagcaaccaccaaacttg 255 Query: 267 ccaggcctaaggatgtcaaacaagttcagggtgtctgcgactgccgtgcacaaggtgaag 326 | |||||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 256 tcttgcctaaggatgtcaaacaagttcagggtgtctgctgcggccgtgcacaaggtgaag 315 Query: 327 ctcgtaggcccggacggggaagagcacgagtttgaggcccctgaagacacctacattctc 386 ||| || |||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 316 ctcataagcccggacggtgaagagcatgagtttgaggcccctgaagacacctacattctt 375 Query: 387 gaggcagctgaaactgccggggtggagctgccattctcttgccgcgccggatcgtgctcc 446 ||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 376 gaggcagctgaaaatgccggagtggagctgccattctcctgccgcgccggatcgtgctcc 435 Query: 447 acttgcgcgggcaagatgaccaccggggaggtcgatcagtcggagggctccttcctcgat 506 || ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 436 acatgcgcgggcaagatgactaccggggaggtcgatcagtcggagggctccttccttgat 495 Query: 507 gagaaccagatgggcgagggataccttctgacctgcatttcataccccaaggcggattgc 566 |||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||| Sbjct: 496 gagaaccagatgggcgaggggtaccttctgacctgcatctcataccccaaggcagattgc 555 Query: 567 gtcattcacacccaccaagaggaggaactctactaat 603 |||||||| |||||||||||||||||||||||||||| Sbjct: 556 gtcattcaaacccaccaagaggaggaactctactaat 592 Score = 101 bits (51), Expect = 4e-18 Identities = 73/79 (92%), Gaps = 1/79 (1%) Strand = Plus / Plus Query: 712 gtcttttgatgagatcgtgctatatgagttgtgagcaataattgatgtaaaatggtttat 771 ||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||| | Sbjct: 684 gtcttttgatgggatcgtgatatatgagttgtga-caataattgatgtaaaatggtttgt 742 Query: 772 cagttgaaactgcgtttgt 790 ||||| ||||||| ||||| Sbjct: 743 cagttcaaactgcatttgt 761 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 629 aattgttgaagctgcatggtggattcgttgttcggttaccttctgttatgtagagat 685 ||||||||||| | | |||||||||| |||||||||| ||||||||||| ||||||| Sbjct: 590 aattgttgaagtttcgtggtggattcattgttcggttgccttctgttatctagagat 646 Score = 54.0 bits (27), Expect = 8e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 24 catctcgcgatcccaaagtccaaccggccgccgcc 58 ||||||||||||||||||||||||| ||| ||||| Sbjct: 38 catctcgcgatcccaaagtccaaccagcctccgcc 72
>ref|NM_001062210.1| Oryza sativa (japonica cultivar-group) Os05g0443500 (Os05g0443500) mRNA, complete cds Length = 1336 Score = 379 bits (191), Expect = e-101 Identities = 347/399 (86%) Strand = Plus / Plus Query: 203 ggccattgctccagcgatcaggaccccttccttcatcggttactcgaagcaaacgccaag 262 |||||||||||| |||| || || |||||||||||| |||||| | |||||||| | Sbjct: 647 ggccattgctccggcgaccaagagcccttccttcattggttacgcaaagcaaacattgaa 706 Query: 263 cctgccaggcctaaggatgtcaaacaagttcagggtgtctgcgactgccgtgcacaaggt 322 | || ||||||||||||| || ||||||||||||||||| ||||| || ||||||||||| Sbjct: 707 catgtcaggcctaaggatctccaacaagttcagggtgtccgcgacagcggtgcacaaggt 766 Query: 323 gaagctcgtaggcccggacggggaagagcacgagtttgaggcccctgaagacacctacat 382 ||||| ||||||||||||| | |||||||||||||| ||||||||||| |||||||| Sbjct: 767 aaagcttataggcccggacggtgtcgagcacgagtttgaagcccctgaagatacctacat 826 Query: 383 tctcgaggcagctgaaactgccggggtggagctgccattctcttgccgcgccggatcgtg 442 ||||||||| |||||||||||||||||||||||||||||||| ||||| || ||||| || Sbjct: 827 tctcgaggccgctgaaactgccggggtggagctgccattctcatgccgtgctggatcatg 886 Query: 443 ctccacttgcgcgggcaagatgaccaccggggaggtcgatcagtcggagggctccttcct 502 |||||| || ||||| |||||| | | || || || ||||||||||| || |||||||| Sbjct: 887 ctccacatgtgcgggtaagatgtcatcgggagaagttgatcagtcggaaggatccttcct 946 Query: 503 cgatgagaaccagatgggcgagggataccttctgacctgcatttcataccccaaggcgga 562 ||| |||||||||||||||||||||||| ||||||| |||||||| ||||| |||||||| Sbjct: 947 cgacgagaaccagatgggcgagggatacgttctgacatgcatttcgtaccctaaggcgga 1006 Query: 563 ttgcgtcattcacacccaccaagaggaggaactctacta 601 ||||||||||||||||||| | ||||| ||||||||||| Sbjct: 1007 ttgcgtcattcacacccacaaggaggaagaactctacta 1045
>gb|AC137611.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0020H14, complete sequence Length = 185623 Score = 379 bits (191), Expect = e-101 Identities = 347/399 (86%) Strand = Plus / Minus Query: 203 ggccattgctccagcgatcaggaccccttccttcatcggttactcgaagcaaacgccaag 262 |||||||||||| |||| || || |||||||||||| |||||| | |||||||| | Sbjct: 115151 ggccattgctccggcgaccaagagcccttccttcattggttacgcaaagcaaacattgaa 115092 Query: 263 cctgccaggcctaaggatgtcaaacaagttcagggtgtctgcgactgccgtgcacaaggt 322 | || ||||||||||||| || ||||||||||||||||| ||||| || ||||||||||| Sbjct: 115091 catgtcaggcctaaggatctccaacaagttcagggtgtccgcgacagcggtgcacaaggt 115032 Query: 323 gaagctcgtaggcccggacggggaagagcacgagtttgaggcccctgaagacacctacat 382 ||||| ||||||||||||| | |||||||||||||| ||||||||||| |||||||| Sbjct: 115031 aaagcttataggcccggacggtgtcgagcacgagtttgaagcccctgaagatacctacat 114972 Query: 383 tctcgaggcagctgaaactgccggggtggagctgccattctcttgccgcgccggatcgtg 442 ||||||||| |||||||||||||||||||||||||||||||| ||||| || ||||| || Sbjct: 114971 tctcgaggccgctgaaactgccggggtggagctgccattctcatgccgtgctggatcatg 114912 Query: 443 ctccacttgcgcgggcaagatgaccaccggggaggtcgatcagtcggagggctccttcct 502 |||||| || ||||| |||||| | | || || || ||||||||||| || |||||||| Sbjct: 114911 ctccacatgtgcgggtaagatgtcatcgggagaagttgatcagtcggaaggatccttcct 114852 Query: 503 cgatgagaaccagatgggcgagggataccttctgacctgcatttcataccccaaggcgga 562 ||| |||||||||||||||||||||||| ||||||| |||||||| ||||| |||||||| Sbjct: 114851 cgacgagaaccagatgggcgagggatacgttctgacatgcatttcgtaccctaaggcgga 114792 Query: 563 ttgcgtcattcacacccaccaagaggaggaactctacta 601 ||||||||||||||||||| | ||||| ||||||||||| Sbjct: 114791 ttgcgtcattcacacccacaaggaggaagaactctacta 114753
>gb|AC147462.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1110B01, complete sequence Length = 160142 Score = 379 bits (191), Expect = e-101 Identities = 347/399 (86%) Strand = Plus / Minus Query: 203 ggccattgctccagcgatcaggaccccttccttcatcggttactcgaagcaaacgccaag 262 |||||||||||| |||| || || |||||||||||| |||||| | |||||||| | Sbjct: 154378 ggccattgctccggcgaccaagagcccttccttcattggttacgcaaagcaaacattgaa 154319 Query: 263 cctgccaggcctaaggatgtcaaacaagttcagggtgtctgcgactgccgtgcacaaggt 322 | || ||||||||||||| || ||||||||||||||||| ||||| || ||||||||||| Sbjct: 154318 catgtcaggcctaaggatctccaacaagttcagggtgtccgcgacagcggtgcacaaggt 154259 Query: 323 gaagctcgtaggcccggacggggaagagcacgagtttgaggcccctgaagacacctacat 382 ||||| ||||||||||||| | |||||||||||||| ||||||||||| |||||||| Sbjct: 154258 aaagcttataggcccggacggtgtcgagcacgagtttgaagcccctgaagatacctacat 154199 Query: 383 tctcgaggcagctgaaactgccggggtggagctgccattctcttgccgcgccggatcgtg 442 ||||||||| |||||||||||||||||||||||||||||||| ||||| || ||||| || Sbjct: 154198 tctcgaggccgctgaaactgccggggtggagctgccattctcatgccgtgctggatcatg 154139 Query: 443 ctccacttgcgcgggcaagatgaccaccggggaggtcgatcagtcggagggctccttcct 502 |||||| || ||||| |||||| | | || || || ||||||||||| || |||||||| Sbjct: 154138 ctccacatgtgcgggtaagatgtcatcgggagaagttgatcagtcggaaggatccttcct 154079 Query: 503 cgatgagaaccagatgggcgagggataccttctgacctgcatttcataccccaaggcgga 562 ||| |||||||||||||||||||||||| ||||||| |||||||| ||||| |||||||| Sbjct: 154078 cgacgagaaccagatgggcgagggatacgttctgacatgcatttcgtaccctaaggcgga 154019 Query: 563 ttgcgtcattcacacccaccaagaggaggaactctacta 601 ||||||||||||||||||| | ||||| ||||||||||| Sbjct: 154018 ttgcgtcattcacacccacaaggaggaagaactctacta 153980
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 379 bits (191), Expect = e-101 Identities = 347/399 (86%) Strand = Plus / Minus Query: 203 ggccattgctccagcgatcaggaccccttccttcatcggttactcgaagcaaacgccaag 262 |||||||||||| |||| || || |||||||||||| |||||| | |||||||| | Sbjct: 21561295 ggccattgctccggcgaccaagagcccttccttcattggttacgcaaagcaaacattgaa 21561236 Query: 263 cctgccaggcctaaggatgtcaaacaagttcagggtgtctgcgactgccgtgcacaaggt 322 | || ||||||||||||| || ||||||||||||||||| ||||| || ||||||||||| Sbjct: 21561235 catgtcaggcctaaggatctccaacaagttcagggtgtccgcgacagcggtgcacaaggt 21561176 Query: 323 gaagctcgtaggcccggacggggaagagcacgagtttgaggcccctgaagacacctacat 382 ||||| ||||||||||||| | |||||||||||||| ||||||||||| |||||||| Sbjct: 21561175 aaagcttataggcccggacggtgtcgagcacgagtttgaagcccctgaagatacctacat 21561116 Query: 383 tctcgaggcagctgaaactgccggggtggagctgccattctcttgccgcgccggatcgtg 442 ||||||||| |||||||||||||||||||||||||||||||| ||||| || ||||| || Sbjct: 21561115 tctcgaggccgctgaaactgccggggtggagctgccattctcatgccgtgctggatcatg 21561056 Query: 443 ctccacttgcgcgggcaagatgaccaccggggaggtcgatcagtcggagggctccttcct 502 |||||| || ||||| |||||| | | || || || ||||||||||| || |||||||| Sbjct: 21561055 ctccacatgtgcgggtaagatgtcatcgggagaagttgatcagtcggaaggatccttcct 21560996 Query: 503 cgatgagaaccagatgggcgagggataccttctgacctgcatttcataccccaaggcgga 562 ||| |||||||||||||||||||||||| ||||||| |||||||| ||||| |||||||| Sbjct: 21560995 cgacgagaaccagatgggcgagggatacgttctgacatgcatttcgtaccctaaggcgga 21560936 Query: 563 ttgcgtcattcacacccaccaagaggaggaactctacta 601 ||||||||||||||||||| | ||||| ||||||||||| Sbjct: 21560935 ttgcgtcattcacacccacaaggaggaagaactctacta 21560897
>dbj|AK103416.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128I21, full insert sequence Length = 1337 Score = 379 bits (191), Expect = e-101 Identities = 347/399 (86%) Strand = Plus / Plus Query: 203 ggccattgctccagcgatcaggaccccttccttcatcggttactcgaagcaaacgccaag 262 |||||||||||| |||| || || |||||||||||| |||||| | |||||||| | Sbjct: 648 ggccattgctccggcgaccaagagcccttccttcattggttacgcaaagcaaacattgaa 707 Query: 263 cctgccaggcctaaggatgtcaaacaagttcagggtgtctgcgactgccgtgcacaaggt 322 | || ||||||||||||| || ||||||||||||||||| ||||| || ||||||||||| Sbjct: 708 catgtcaggcctaaggatctccaacaagttcagggtgtccgcgacagcggtgcacaaggt 767 Query: 323 gaagctcgtaggcccggacggggaagagcacgagtttgaggcccctgaagacacctacat 382 ||||| ||||||||||||| | |||||||||||||| ||||||||||| |||||||| Sbjct: 768 aaagcttataggcccggacggtgtcgagcacgagtttgaagcccctgaagatacctacat 827 Query: 383 tctcgaggcagctgaaactgccggggtggagctgccattctcttgccgcgccggatcgtg 442 ||||||||| |||||||||||||||||||||||||||||||| ||||| || ||||| || Sbjct: 828 tctcgaggccgctgaaactgccggggtggagctgccattctcatgccgtgctggatcatg 887 Query: 443 ctccacttgcgcgggcaagatgaccaccggggaggtcgatcagtcggagggctccttcct 502 |||||| || ||||| |||||| | | || || || ||||||||||| || |||||||| Sbjct: 888 ctccacatgtgcgggtaagatgtcatcgggagaagttgatcagtcggaaggatccttcct 947 Query: 503 cgatgagaaccagatgggcgagggataccttctgacctgcatttcataccccaaggcgga 562 ||| |||||||||||||||||||||||| ||||||| |||||||| ||||| |||||||| Sbjct: 948 cgacgagaaccagatgggcgagggatacgttctgacatgcatttcgtaccctaaggcgga 1007 Query: 563 ttgcgtcattcacacccaccaagaggaggaactctacta 601 ||||||||||||||||||| | ||||| ||||||||||| Sbjct: 1008 ttgcgtcattcacacccacaaggaggaagaactctacta 1046
>dbj|D30794.1|RICFERRA Oryza sativa (japonica cultivar-group) gene for ferredoxin, complete cds Length = 1829 Score = 379 bits (191), Expect = e-101 Identities = 347/399 (86%) Strand = Plus / Plus Query: 203 ggccattgctccagcgatcaggaccccttccttcatcggttactcgaagcaaacgccaag 262 |||||||||||| |||| || || |||||||||||| |||||| | |||||||| | Sbjct: 1175 ggccattgctccggcgaccaagagcccttccttcattggttacgcaaagcaaacattgaa 1234 Query: 263 cctgccaggcctaaggatgtcaaacaagttcagggtgtctgcgactgccgtgcacaaggt 322 | || ||||||||||||| || ||||||||||||||||| ||||| || ||||||||||| Sbjct: 1235 catgtcaggcctaaggatctccaacaagttcagggtgtccgcgacagcggtgcacaaggt 1294 Query: 323 gaagctcgtaggcccggacggggaagagcacgagtttgaggcccctgaagacacctacat 382 ||||| ||||||||||||| | |||||||||||||| ||||||||||| |||||||| Sbjct: 1295 aaagcttataggcccggacggtgtcgagcacgagtttgaagcccctgaagatacctacat 1354 Query: 383 tctcgaggcagctgaaactgccggggtggagctgccattctcttgccgcgccggatcgtg 442 ||||||||| |||||||||||||||||||||||||||||||| ||||| || ||||| || Sbjct: 1355 tctcgaggccgctgaaactgccggggtggagctgccattctcatgccgtgctggatcatg 1414 Query: 443 ctccacttgcgcgggcaagatgaccaccggggaggtcgatcagtcggagggctccttcct 502 |||||| || ||||| |||||| | | || || || ||||||||||| || |||||||| Sbjct: 1415 ctccacatgtgcgggtaagatgtcatcgggagaagttgatcagtcggaaggatccttcct 1474 Query: 503 cgatgagaaccagatgggcgagggataccttctgacctgcatttcataccccaaggcgga 562 ||| |||||||||||||||||||||||| ||||||| |||||||| ||||| |||||||| Sbjct: 1475 cgacgagaaccagatgggcgagggatacgttctgacatgcatttcgtaccctaaggcgga 1534 Query: 563 ttgcgtcattcacacccaccaagaggaggaactctacta 601 ||||||||||||||||||| | ||||| ||||||||||| Sbjct: 1535 ttgcgtcattcacacccacaaggaggaagaactctacta 1573
>emb|CT830808.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI026B09, full insert sequence Length = 719 Score = 371 bits (187), Expect = 3e-99 Identities = 346/399 (86%) Strand = Plus / Plus Query: 203 ggccattgctccagcgatcaggaccccttccttcatcggttactcgaagcaaacgccaag 262 |||||||||||| |||| || || |||||||||||| |||||| | |||||||| | Sbjct: 138 ggccattgctccggcgaccaagagcccttccttcattggttacgcaaagcaaacattgaa 197 Query: 263 cctgccaggcctaaggatgtcaaacaagttcagggtgtctgcgactgccgtgcacaaggt 322 | || ||||||||||||| || ||||||||||||||||| ||||| || ||||||||||| Sbjct: 198 catgtcaggcctaaggatctccaacaagttcagggtgtccgcgacagcggtgcacaaggt 257 Query: 323 gaagctcgtaggcccggacggggaagagcacgagtttgaggcccctgaagacacctacat 382 ||||| ||||||||||||| | |||||||||||||| ||||||||||| |||||||| Sbjct: 258 aaagcttataggcccggacggtgtcgagcacgagtttgaagcccctgaagatacctacat 317 Query: 383 tctcgaggcagctgaaactgccggggtggagctgccattctcttgccgcgccggatcgtg 442 ||| ||||| |||||||||||||||||||||||||||||||| ||||| || ||||| || Sbjct: 318 tctggaggccgctgaaactgccggggtggagctgccattctcatgccgtgctggatcatg 377 Query: 443 ctccacttgcgcgggcaagatgaccaccggggaggtcgatcagtcggagggctccttcct 502 |||||| || ||||| |||||| | | || || || ||||||||||| || |||||||| Sbjct: 378 ctccacatgtgcgggtaagatgtcatcgggagaagttgatcagtcggaaggatccttcct 437 Query: 503 cgatgagaaccagatgggcgagggataccttctgacctgcatttcataccccaaggcgga 562 ||| |||||||||||||||||||||||| ||||||| |||||||| ||||| |||||||| Sbjct: 438 cgacgagaaccagatgggcgagggatacgttctgacatgcatttcgtaccctaaggcgga 497 Query: 563 ttgcgtcattcacacccaccaagaggaggaactctacta 601 ||||||||||||||||||| | ||||| ||||||||||| Sbjct: 498 ttgcgtcattcacacccacaaggaggaagaactctacta 536
>emb|CT830807.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI001A10, full insert sequence Length = 765 Score = 371 bits (187), Expect = 3e-99 Identities = 346/399 (86%) Strand = Plus / Plus Query: 203 ggccattgctccagcgatcaggaccccttccttcatcggttactcgaagcaaacgccaag 262 |||||||||||| |||| || || |||||||||||| |||||| | |||||||| | Sbjct: 144 ggccattgctccggcgaccaagagcccttccttcattggttacgcaaagcaaacattgaa 203 Query: 263 cctgccaggcctaaggatgtcaaacaagttcagggtgtctgcgactgccgtgcacaaggt 322 | || ||||||||||||| || ||||||||||||||||| ||||| || ||||||||||| Sbjct: 204 catgtcaggcctaaggatctccaacaagttcagggtgtccgcgacagcggtgcacaaggt 263 Query: 323 gaagctcgtaggcccggacggggaagagcacgagtttgaggcccctgaagacacctacat 382 ||||| ||||||||||||| | |||||||||||||| ||||||||||| |||||||| Sbjct: 264 aaagcttataggcccggacggtgtcgagcacgagtttgaagcccctgaagatacctacat 323 Query: 383 tctcgaggcagctgaaactgccggggtggagctgccattctcttgccgcgccggatcgtg 442 ||| ||||| |||||||||||||||||||||||||||||||| ||||| || ||||| || Sbjct: 324 tctggaggccgctgaaactgccggggtggagctgccattctcatgccgtgctggatcatg 383 Query: 443 ctccacttgcgcgggcaagatgaccaccggggaggtcgatcagtcggagggctccttcct 502 |||||| || ||||| |||||| | | || || || ||||||||||| || |||||||| Sbjct: 384 ctccacatgtgcgggtaagatgtcatcgggagaagttgatcagtcggaaggatccttcct 443 Query: 503 cgatgagaaccagatgggcgagggataccttctgacctgcatttcataccccaaggcgga 562 ||| |||||||||||||||||||||||| ||||||| |||||||| ||||| |||||||| Sbjct: 444 cgacgagaaccagatgggcgagggatacgttctgacatgcatttcgtaccctaaggcgga 503 Query: 563 ttgcgtcattcacacccaccaagaggaggaactctacta 601 ||||||||||||||||||| | ||||| ||||||||||| Sbjct: 504 ttgcgtcattcacacccacaaggaggaagaactctacta 542
>emb|CT830806.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA333Z86, full insert sequence Length = 830 Score = 371 bits (187), Expect = 3e-99 Identities = 346/399 (86%) Strand = Plus / Plus Query: 203 ggccattgctccagcgatcaggaccccttccttcatcggttactcgaagcaaacgccaag 262 |||||||||||| |||| || || |||||||||||| |||||| | |||||||| | Sbjct: 142 ggccattgctccggcgaccaagagcccttccttcattggttacgcaaagcaaacattgaa 201 Query: 263 cctgccaggcctaaggatgtcaaacaagttcagggtgtctgcgactgccgtgcacaaggt 322 | || ||||||||||||| || ||||||||||||||||| ||||| || ||||||||||| Sbjct: 202 catgtcaggcctaaggatctccaacaagttcagggtgtccgcgacagcggtgcacaaggt 261 Query: 323 gaagctcgtaggcccggacggggaagagcacgagtttgaggcccctgaagacacctacat 382 ||||| ||||||||||||| | |||||||||||||| ||||||||||| |||||||| Sbjct: 262 aaagcttataggcccggacggtgtcgagcacgagtttgaagcccctgaagatacctacat 321 Query: 383 tctcgaggcagctgaaactgccggggtggagctgccattctcttgccgcgccggatcgtg 442 ||| ||||| |||||||||||||||||||||||||||||||| ||||| || ||||| || Sbjct: 322 tctggaggccgctgaaactgccggggtggagctgccattctcatgccgtgctggatcatg 381 Query: 443 ctccacttgcgcgggcaagatgaccaccggggaggtcgatcagtcggagggctccttcct 502 |||||| || ||||| |||||| | | || || || ||||||||||| || |||||||| Sbjct: 382 ctccacatgtgcgggtaagatgtcatcgggagaagttgatcagtcggaaggatccttcct 441 Query: 503 cgatgagaaccagatgggcgagggataccttctgacctgcatttcataccccaaggcgga 562 ||| |||||||||||||||||||||||| ||||||| |||||||| ||||| |||||||| Sbjct: 442 cgacgagaaccagatgggcgagggatacgttctgacatgcatttcgtaccctaaggcgga 501 Query: 563 ttgcgtcattcacacccaccaagaggaggaactctacta 601 ||||||||||||||||||| | ||||| ||||||||||| Sbjct: 502 ttgcgtcattcacacccacaaggaggaagaactctacta 540
>dbj|D83660.1|RICRF Oryza sativa mRNA for root ferredoxin, partial cds Length = 603 Score = 280 bits (141), Expect = 8e-72 Identities = 222/249 (89%) Strand = Plus / Plus Query: 353 cgagtttgaggcccctgaagacacctacattctcgaggcagctgaaactgccggggtgga 412 ||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 15 cgagtttgaagcccctgaagatacctacattctcgaggccgctgaaactgccggggtgga 74 Query: 413 gctgccattctcttgccgcgccggatcgtgctccacttgcgcgggcaagatgaccaccgg 472 |||||||||||| ||||| || ||||| |||||||| || ||||| |||||| | | || Sbjct: 75 gctgccattctcatgccgtgctggatcatgctccacatgtgcgggtaagatgtcatcggg 134 Query: 473 ggaggtcgatcagtcggagggctccttcctcgatgagaaccagatgggcgagggatacct 532 || || ||||||||||| || ||||||||||| |||||||||||||||||||||||| | Sbjct: 135 agaagttgatcagtcggaaggatccttcctcgacgagaaccagatgggcgagggatacgt 194 Query: 533 tctgacctgcatttcataccccaaggcggattgcgtcattcacacccaccaagaggagga 592 |||||| |||||||| ||||| ||||||||||||||||||||||||||| | ||||| || Sbjct: 195 tctgacatgcatttcgtaccctaaggcggattgcgtcattcacacccacaaggaggaaga 254 Query: 593 actctacta 601 ||||||||| Sbjct: 255 actctacta 263
>gb|DQ244470.1| Zea mays clone 7963 mRNA sequence Length = 938 Score = 224 bits (113), Expect = 4e-55 Identities = 245/289 (84%) Strand = Plus / Plus Query: 313 tgcacaaggtgaagctcgtaggcccggacggggaagagcacgagtttgaggcccctgaag 372 |||||||||||||||| || |||||||||||| ||||||||||| |||||||| || | Sbjct: 330 tgcacaaggtgaagctggtcggcccggacgggacggagcacgagttcgaggcccccgacg 389 Query: 373 acacctacattctcgaggcagctgaaactgccggggtggagctgccattctcttgccgcg 432 |||||||||| |||||||| || || || ||||||||||||||||| ||||| ||||||| Sbjct: 390 acacctacatcctcgaggcggccgagaccgccggggtggagctgcccttctcctgccgcg 449 Query: 433 ccggatcgtgctccacttgcgcgggcaagatgaccaccggggaggtcgatcagtcggagg 492 |||| || |||||||| ||||| || | |||| | |||| |||||||| |||||||||| Sbjct: 450 ccgggtcctgctccacctgcgccgggaggatgtcggccggcgaggtcgaccagtcggagg 509 Query: 493 gctccttcctcgatgagaaccagatgggcgagggataccttctgacctgcatttcatacc 552 | ||||||||||| || |||||||| |||||| ||||| || |||||||| || |||| Sbjct: 510 ggtccttcctcgacgacggccagatggccgaggggtacctcctcacctgcatctcctacc 569 Query: 553 ccaaggcggattgcgtcattcacacccaccaagaggaggaactctacta 601 ||||||| || |||||||| ||||||||| | |||||||| || ||||| Sbjct: 570 ccaaggcagactgcgtcatccacacccacaaggaggaggacctgtacta 618
>gb|AY107646.1| Zea mays PCO072676 mRNA sequence Length = 941 Score = 224 bits (113), Expect = 4e-55 Identities = 245/289 (84%) Strand = Plus / Plus Query: 313 tgcacaaggtgaagctcgtaggcccggacggggaagagcacgagtttgaggcccctgaag 372 |||||||||||||||| || |||||||||||| ||||||||||| |||||||| || | Sbjct: 335 tgcacaaggtgaagctggtcggcccggacgggacggagcacgagttcgaggcccccgacg 394 Query: 373 acacctacattctcgaggcagctgaaactgccggggtggagctgccattctcttgccgcg 432 |||||||||| |||||||| || || || ||||||||||||||||| ||||| ||||||| Sbjct: 395 acacctacatcctcgaggcggccgagaccgccggggtggagctgcccttctcctgccgcg 454 Query: 433 ccggatcgtgctccacttgcgcgggcaagatgaccaccggggaggtcgatcagtcggagg 492 |||| || |||||||| ||||| || | |||| | |||| |||||||| |||||||||| Sbjct: 455 ccgggtcctgctccacctgcgccgggaggatgtcggccggcgaggtcgaccagtcggagg 514 Query: 493 gctccttcctcgatgagaaccagatgggcgagggataccttctgacctgcatttcatacc 552 | ||||||||||| || |||||||| |||||| ||||| || |||||||| || |||| Sbjct: 515 ggtccttcctcgacgacggccagatggccgaggggtacctcctcacctgcatctcctacc 574 Query: 553 ccaaggcggattgcgtcattcacacccaccaagaggaggaactctacta 601 ||||||| || |||||||| ||||||||| | |||||||| || ||||| Sbjct: 575 ccaaggcagactgcgtcatccacacccacaaggaggaggacctgtacta 623
>dbj|AB001386.1| Maize DNA for Fd VI, complete cds Length = 2351 Score = 224 bits (113), Expect = 4e-55 Identities = 245/289 (84%) Strand = Plus / Plus Query: 313 tgcacaaggtgaagctcgtaggcccggacggggaagagcacgagtttgaggcccctgaag 372 |||||||||||||||| || |||||||||||| ||||||||||| |||||||| || | Sbjct: 1759 tgcacaaggtgaagctggtcggcccggacgggacggagcacgagttcgaggcccccgacg 1818 Query: 373 acacctacattctcgaggcagctgaaactgccggggtggagctgccattctcttgccgcg 432 |||||||||| |||||||| || || || ||||||||||||||||| ||||| ||||||| Sbjct: 1819 acacctacatcctcgaggcggccgagaccgccggggtggagctgcccttctcctgccgcg 1878 Query: 433 ccggatcgtgctccacttgcgcgggcaagatgaccaccggggaggtcgatcagtcggagg 492 |||| || |||||||| ||||| || | |||| | |||| |||||||| |||||||||| Sbjct: 1879 ccgggtcctgctccacctgcgccgggaggatgtcggccggcgaggtcgaccagtcggagg 1938 Query: 493 gctccttcctcgatgagaaccagatgggcgagggataccttctgacctgcatttcatacc 552 | ||||||||||| || |||||||| |||||| ||||| || |||||||| || |||| Sbjct: 1939 ggtccttcctcgacgacggccagatggccgaggggtacctcctcacctgcatctcctacc 1998 Query: 553 ccaaggcggattgcgtcattcacacccaccaagaggaggaactctacta 601 ||||||| || |||||||| ||||||||| | |||||||| || ||||| Sbjct: 1999 ccaaggcagactgcgtcatccacacccacaaggaggaggacctgtacta 2047
>dbj|AB001385.1| Maize mRNA for Fd VI, complete cds Length = 845 Score = 224 bits (113), Expect = 4e-55 Identities = 245/289 (84%) Strand = Plus / Plus Query: 313 tgcacaaggtgaagctcgtaggcccggacggggaagagcacgagtttgaggcccctgaag 372 |||||||||||||||| || |||||||||||| ||||||||||| |||||||| || | Sbjct: 333 tgcacaaggtgaagctggtcggcccggacgggacggagcacgagttcgaggcccccgacg 392 Query: 373 acacctacattctcgaggcagctgaaactgccggggtggagctgccattctcttgccgcg 432 |||||||||| |||||||| || || || ||||||||||||||||| ||||| ||||||| Sbjct: 393 acacctacatcctcgaggcggccgagaccgccggggtggagctgcccttctcctgccgcg 452 Query: 433 ccggatcgtgctccacttgcgcgggcaagatgaccaccggggaggtcgatcagtcggagg 492 |||| || |||||||| ||||| || | |||| | |||| |||||||| |||||||||| Sbjct: 453 ccgggtcctgctccacctgcgccgggaggatgtcggccggcgaggtcgaccagtcggagg 512 Query: 493 gctccttcctcgatgagaaccagatgggcgagggataccttctgacctgcatttcatacc 552 | ||||||||||| || |||||||| |||||| ||||| || |||||||| || |||| Sbjct: 513 ggtccttcctcgacgacggccagatggccgaggggtacctcctcacctgcatctcctacc 572 Query: 553 ccaaggcggattgcgtcattcacacccaccaagaggaggaactctacta 601 ||||||| || |||||||| ||||||||| | |||||||| || ||||| Sbjct: 573 ccaaggcagactgcgtcatccacacccacaaggaggaggacctgtacta 621
>ref|NM_001051407.1| Oryza sativa (japonica cultivar-group) Os01g0860500 (Os01g0860500) mRNA, complete cds Length = 3418 Score = 73.8 bits (37), Expect = 9e-10 Identities = 160/201 (79%) Strand = Plus / Plus Query: 290 gttcagggtgtctgcgactgccgtgcacaaggtgaagctcgtaggcccggacggggaaga 349 |||||||| ||| ||| | ||||||||||||||||||||| | || |||||||| | || Sbjct: 2721 gttcagggcgtccgcggcggccgtgcacaaggtgaagctcatcgggccggacggcgcgga 2780 Query: 350 gcacgagtttgaggcccctgaagacacctacattctcgaggcagctgaaactgccggggt 409 | |||| | |||| || || ||||||||| | ||||| || || || ||||| | Sbjct: 2781 gagcgagctcgaggtgcccgaggacacctacgtcctcgacgccgccgaggaggccggcct 2840 Query: 410 ggagctgccattctcttgccgcgccggatcgtgctccacttgcgcgggcaagatgaccac 469 ||||||||| | ||| ||||| ||||| ||||||||||| ||||| |||||| || || | Sbjct: 2841 ggagctgccttactcgtgccgggccggctcgtgctccacgtgcgccggcaagctggcctc 2900 Query: 470 cggggaggtcgatcagtcgga 490 ||| |||||||| |||||||| Sbjct: 2901 cggcgaggtcgaccagtcgga 2921
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 73.8 bits (37), Expect = 9e-10 Identities = 160/201 (79%) Strand = Plus / Plus Query: 290 gttcagggtgtctgcgactgccgtgcacaaggtgaagctcgtaggcccggacggggaaga 349 |||||||| ||| ||| | ||||||||||||||||||||| | || |||||||| | || Sbjct: 37234896 gttcagggcgtccgcggcggccgtgcacaaggtgaagctcatcgggccggacggcgcgga 37234955 Query: 350 gcacgagtttgaggcccctgaagacacctacattctcgaggcagctgaaactgccggggt 409 | |||| | |||| || || ||||||||| | ||||| || || || ||||| | Sbjct: 37234956 gagcgagctcgaggtgcccgaggacacctacgtcctcgacgccgccgaggaggccggcct 37235015 Query: 410 ggagctgccattctcttgccgcgccggatcgtgctccacttgcgcgggcaagatgaccac 469 ||||||||| | ||| ||||| ||||| ||||||||||| ||||| |||||| || || | Sbjct: 37235016 ggagctgccttactcgtgccgggccggctcgtgctccacgtgcgccggcaagctggcctc 37235075 Query: 470 cggggaggtcgatcagtcgga 490 ||| |||||||| |||||||| Sbjct: 37235076 cggcgaggtcgaccagtcgga 37235096
>dbj|AP003794.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489B03 Length = 150381 Score = 73.8 bits (37), Expect = 9e-10 Identities = 160/201 (79%) Strand = Plus / Plus Query: 290 gttcagggtgtctgcgactgccgtgcacaaggtgaagctcgtaggcccggacggggaaga 349 |||||||| ||| ||| | ||||||||||||||||||||| | || |||||||| | || Sbjct: 109552 gttcagggcgtccgcggcggccgtgcacaaggtgaagctcatcgggccggacggcgcgga 109611 Query: 350 gcacgagtttgaggcccctgaagacacctacattctcgaggcagctgaaactgccggggt 409 | |||| | |||| || || ||||||||| | ||||| || || || ||||| | Sbjct: 109612 gagcgagctcgaggtgcccgaggacacctacgtcctcgacgccgccgaggaggccggcct 109671 Query: 410 ggagctgccattctcttgccgcgccggatcgtgctccacttgcgcgggcaagatgaccac 469 ||||||||| | ||| ||||| ||||| ||||||||||| ||||| |||||| || || | Sbjct: 109672 ggagctgccttactcgtgccgggccggctcgtgctccacgtgcgccggcaagctggcctc 109731 Query: 470 cggggaggtcgatcagtcgga 490 ||| |||||||| |||||||| Sbjct: 109732 cggcgaggtcgaccagtcgga 109752
>dbj|AP003287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0679C12 Length = 153666 Score = 73.8 bits (37), Expect = 9e-10 Identities = 160/201 (79%) Strand = Plus / Plus Query: 290 gttcagggtgtctgcgactgccgtgcacaaggtgaagctcgtaggcccggacggggaaga 349 |||||||| ||| ||| | ||||||||||||||||||||| | || |||||||| | || Sbjct: 71885 gttcagggcgtccgcggcggccgtgcacaaggtgaagctcatcgggccggacggcgcgga 71944 Query: 350 gcacgagtttgaggcccctgaagacacctacattctcgaggcagctgaaactgccggggt 409 | |||| | |||| || || ||||||||| | ||||| || || || ||||| | Sbjct: 71945 gagcgagctcgaggtgcccgaggacacctacgtcctcgacgccgccgaggaggccggcct 72004 Query: 410 ggagctgccattctcttgccgcgccggatcgtgctccacttgcgcgggcaagatgaccac 469 ||||||||| | ||| ||||| ||||| ||||||||||| ||||| |||||| || || | Sbjct: 72005 ggagctgccttactcgtgccgggccggctcgtgctccacgtgcgccggcaagctggcctc 72064 Query: 470 cggggaggtcgatcagtcgga 490 ||| |||||||| |||||||| Sbjct: 72065 cggcgaggtcgaccagtcgga 72085
>dbj|AK119310.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-G06, full insert sequence Length = 3419 Score = 73.8 bits (37), Expect = 9e-10 Identities = 160/201 (79%) Strand = Plus / Minus Query: 290 gttcagggtgtctgcgactgccgtgcacaaggtgaagctcgtaggcccggacggggaaga 349 |||||||| ||| ||| | ||||||||||||||||||||| | || |||||||| | || Sbjct: 699 gttcagggcgtccgcggcggccgtgcacaaggtgaagctcatcgggccggacggcgcgga 640 Query: 350 gcacgagtttgaggcccctgaagacacctacattctcgaggcagctgaaactgccggggt 409 | |||| | |||| || || ||||||||| | ||||| || || || ||||| | Sbjct: 639 gagcgagctcgaggtgcccgaggacacctacgtcctcgacgccgccgaggaggccggcct 580 Query: 410 ggagctgccattctcttgccgcgccggatcgtgctccacttgcgcgggcaagatgaccac 469 ||||||||| | ||| ||||| ||||| ||||||||||| ||||| |||||| || || | Sbjct: 579 ggagctgccttactcgtgccgggccggctcgtgctccacgtgcgccggcaagctggcctc 520 Query: 470 cggggaggtcgatcagtcgga 490 ||| |||||||| |||||||| Sbjct: 519 cggcgaggtcgaccagtcgga 499
>dbj|AK069860.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035H08, full insert sequence Length = 911 Score = 73.8 bits (37), Expect = 9e-10 Identities = 160/201 (79%) Strand = Plus / Plus Query: 290 gttcagggtgtctgcgactgccgtgcacaaggtgaagctcgtaggcccggacggggaaga 349 |||||||| ||| ||| | ||||||||||||||||||||| | || |||||||| | || Sbjct: 482 gttcagggcgtccgcggcggccgtgcacaaggtgaagctcatcgggccggacggcgcgga 541 Query: 350 gcacgagtttgaggcccctgaagacacctacattctcgaggcagctgaaactgccggggt 409 | |||| | |||| || || ||||||||| | ||||| || || || ||||| | Sbjct: 542 gagcgagctcgaggtgcccgaggacacctacgtcctcgacgccgccgaggaggccggcct 601 Query: 410 ggagctgccattctcttgccgcgccggatcgtgctccacttgcgcgggcaagatgaccac 469 ||||||||| | ||| ||||| ||||| ||||||||||| ||||| |||||| || || | Sbjct: 602 ggagctgccttactcgtgccgggccggctcgtgctccacgtgcgccggcaagctggcctc 661 Query: 470 cggggaggtcgatcagtcgga 490 ||| |||||||| |||||||| Sbjct: 662 cggcgaggtcgaccagtcgga 682
>gb|DQ245480.1| Zea mays clone 15951 mRNA sequence Length = 899 Score = 69.9 bits (35), Expect = 1e-08 Identities = 95/115 (82%) Strand = Plus / Plus Query: 316 acaaggtgaagctcgtaggcccggacggggaagagcacgagtttgaggcccctgaagaca 375 ||||||||||||| || || || || || ||||||||||||||||| || || || ||| Sbjct: 355 acaaggtgaagcttgtcgggcctgaaggtgaagagcacgagtttgatgctccagacgacg 414 Query: 376 cctacattctcgaggcagctgaaactgccggggtggagctgccattctcttgccg 430 ||||||| || || ||||| || |||||||| |||||| |||||| ||| ||||| Sbjct: 415 cctacatccttgacgcagccgagactgccggtgtggagttgccatactcgtgccg 469
>gb|BT016313.1| Zea mays clone Contig146 mRNA sequence Length = 926 Score = 69.9 bits (35), Expect = 1e-08 Identities = 95/115 (82%) Strand = Plus / Plus Query: 316 acaaggtgaagctcgtaggcccggacggggaagagcacgagtttgaggcccctgaagaca 375 ||||||||||||| || || || || || ||||||||||||||||| || || || ||| Sbjct: 349 acaaggtgaagcttgtcgggcctgaaggtgaagagcacgagtttgatgctccagacgacg 408 Query: 376 cctacattctcgaggcagctgaaactgccggggtggagctgccattctcttgccg 430 ||||||| || || ||||| || |||||||| |||||| |||||| ||| ||||| Sbjct: 409 cctacatccttgacgcagccgagactgccggtgtggagttgccatactcgtgccg 463
>gb|AY104148.1| Zea mays PCO088579 mRNA sequence Length = 1090 Score = 69.9 bits (35), Expect = 1e-08 Identities = 95/115 (82%) Strand = Plus / Plus Query: 316 acaaggtgaagctcgtaggcccggacggggaagagcacgagtttgaggcccctgaagaca 375 ||||||||||||| || || || || || ||||||||||||||||| || || || ||| Sbjct: 491 acaaggtgaagcttgtcgggcctgaaggtgaagagcacgagtttgatgctccagacgacg 550 Query: 376 cctacattctcgaggcagctgaaactgccggggtggagctgccattctcttgccg 430 ||||||| || || ||||| || |||||||| |||||| |||||| ||| ||||| Sbjct: 551 cctacatccttgacgcagccgagactgccggtgtggagttgccatactcgtgccg 605
>dbj|AB001387.1| Maize DNA for Fd III, complete cds Length = 5179 Score = 61.9 bits (31), Expect = 3e-06 Identities = 94/115 (81%) Strand = Plus / Plus Query: 316 acaaggtgaagctcgtaggcccggacggggaagagcacgagtttgaggcccctgaagaca 375 ||||||||||||| || || || || || ||||||||||||||||| || || || ||| Sbjct: 4358 acaaggtgaagcttgtcgggcctgaaggtgaagagcacgagtttgatgctccagacgacg 4417 Query: 376 cctacattctcgaggcagctgaaactgccggggtggagctgccattctcttgccg 430 ||||||| || || || || || |||||||| |||||| |||||| ||| ||||| Sbjct: 4418 cctacatccttgacgctgccgagactgccggtgtggagttgccatactcgtgccg 4472
>gb|M73831.1|MZEFD3 Maize ferredoxin III (Fd) isoprotein mRNA, pFD3 Length = 705 Score = 61.9 bits (31), Expect = 3e-06 Identities = 94/115 (81%) Strand = Plus / Plus Query: 316 acaaggtgaagctcgtaggcccggacggggaagagcacgagtttgaggcccctgaagaca 375 ||||||||||||| || || || || || ||||||||||||||||| || || || ||| Sbjct: 184 acaaggtgaagcttgtcgggcctgaaggtgaagagcacgagtttgatgctccagacgacg 243 Query: 376 cctacattctcgaggcagctgaaactgccggggtggagctgccattctcttgccg 430 ||||||| || || || || || |||||||| |||||| |||||| ||| ||||| Sbjct: 244 cctacatccttgacgctgccgagactgccggtgtggagttgccatactcgtgccg 298
>gb|AC186878.3| Pan troglodytes BAC clone CH251-633J4 from chromosome 4, complete sequence Length = 207766 Score = 46.1 bits (23), Expect = 0.20 Identities = 26/27 (96%) Strand = Plus / Minus Query: 3 ccacccacccccacacaccaccatctc 29 |||||||||||||||| |||||||||| Sbjct: 150399 ccacccacccccacaccccaccatctc 150373
>ref|XM_001220688.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_01468) mRNA, complete cds Length = 4164 Score = 44.1 bits (22), Expect = 0.78 Identities = 22/22 (100%) Strand = Plus / Minus Query: 422 ctcttgccgcgccggatcgtgc 443 |||||||||||||||||||||| Sbjct: 3884 ctcttgccgcgccggatcgtgc 3863
>gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome Length = 6537648 Score = 44.1 bits (22), Expect = 0.78 Identities = 22/22 (100%) Strand = Plus / Minus Query: 216 gcgatcaggaccccttccttca 237 |||||||||||||||||||||| Sbjct: 2622774 gcgatcaggaccccttccttca 2622753
>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome Length = 6264404 Score = 44.1 bits (22), Expect = 0.78 Identities = 22/22 (100%) Strand = Plus / Plus Query: 216 gcgatcaggaccccttccttca 237 |||||||||||||||||||||| Sbjct: 2959137 gcgatcaggaccccttccttca 2959158
>gb|AC122752.10| Mus musculus chromosome 8, clone RP24-358A6, complete sequence Length = 155477 Score = 44.1 bits (22), Expect = 0.78 Identities = 22/22 (100%) Strand = Plus / Minus Query: 344 ggaagagcacgagtttgaggcc 365 |||||||||||||||||||||| Sbjct: 44854 ggaagagcacgagtttgaggcc 44833
>dbj|AK140078.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230207F24 product:unclassifiable, full insert sequence Length = 3703 Score = 44.1 bits (22), Expect = 0.78 Identities = 22/22 (100%) Strand = Plus / Plus Query: 344 ggaagagcacgagtttgaggcc 365 |||||||||||||||||||||| Sbjct: 1263 ggaagagcacgagtttgaggcc 1284
>dbj|AK041938.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630048B09 product:unclassifiable, full insert sequence Length = 2393 Score = 44.1 bits (22), Expect = 0.78 Identities = 22/22 (100%) Strand = Plus / Minus Query: 344 ggaagagcacgagtttgaggcc 365 |||||||||||||||||||||| Sbjct: 1185 ggaagagcacgagtttgaggcc 1164
>emb|AL662806.20| Mouse DNA sequence from clone RP23-273O7 on chromosome 11 Contains the 5' end of the Cyfip2 gene for cytoplasmic FMR1 interacting protein 2, the Itk gene for IL2-inducible T-cell kinase, two novel genes and a CpG island, complete sequence Length = 161754 Score = 44.1 bits (22), Expect = 0.78 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 cccacccccacacaccaccatc 27 |||||||||||||||||||||| Sbjct: 11327 cccacccccacacaccaccatc 11306
>gb|AC002329.2|AC002329 Arabidopsis thaliana chromosome II section 100 of 255 of the complete sequence. Sequence from clones T23A1, F5J6, MJB20 Length = 76170 Score = 44.1 bits (22), Expect = 0.78 Identities = 22/22 (100%) Strand = Plus / Plus Query: 744 gagcaataattgatgtaaaatg 765 |||||||||||||||||||||| Sbjct: 20737 gagcaataattgatgtaaaatg 20758
>ref|NM_001058356.1| Oryza sativa (japonica cultivar-group) Os03g0835900 (Os03g0835900) mRNA, complete cds Length = 855 Score = 42.1 bits (21), Expect = 3.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 346 aagagcacgagtttgaggcccctgaagacacctacat 382 ||||||||||||| ||||| || || ||||||||||| Sbjct: 333 aagagcacgagttcgaggctccggatgacacctacat 369
>ref|XM_516818.2| PREDICTED: Pan troglodytes similar to C3orf44 protein, transcript variant 6 (LOC460780), mRNA Length = 2059 Score = 42.1 bits (21), Expect = 3.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 342 ggggaagagcacgagtttgaggcccctga 370 ||||||||||| ||||| ||||||||||| Sbjct: 247 ggggaagagcaggagttggaggcccctga 275
>gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genomic sequence, complete sequence Length = 164352 Score = 42.1 bits (21), Expect = 3.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 346 aagagcacgagtttgaggcccctgaagacacctacat 382 ||||||||||||| ||||| || || ||||||||||| Sbjct: 42717 aagagcacgagttcgaggctccggatgacacctacat 42681
>dbj|AK091958.1| Homo sapiens cDNA FLJ34639 fis, clone KIDNE2016371 Length = 2569 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 gagaaggcccagaggagcaag 146 ||||||||||||||||||||| Sbjct: 179 gagaaggcccagaggagcaag 199
>dbj|AB183443.1| Rhodococcus sp. TKN46 gyrB gene for DNA gyrase subunit B, partial cds Length = 1185 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 302 tgcgactgccgtgcacaaggtgaag 326 |||| |||||||||||||||||||| Sbjct: 366 tgcgcctgccgtgcacaaggtgaag 390
>ref|NM_152394.3| Homo sapiens chromosome 3 open reading frame 44 (C3orf44), mRNA Length = 2067 Score = 42.1 bits (21), Expect = 3.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 342 ggggaagagcacgagtttgaggcccctga 370 ||||||||||| ||||| ||||||||||| Sbjct: 241 ggggaagagcaggagttggaggcccctga 269
>gb|BC036239.1| Homo sapiens chromosome 3 open reading frame 44, mRNA (cDNA clone MGC:39805 IMAGE:5297417), complete cds Length = 2067 Score = 42.1 bits (21), Expect = 3.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 342 ggggaagagcacgagtttgaggcccctga 370 ||||||||||| ||||| ||||||||||| Sbjct: 241 ggggaagagcaggagttggaggcccctga 269
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 3.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 346 aagagcacgagtttgaggcccctgaagacacctacat 382 ||||||||||||| ||||| || || ||||||||||| Sbjct: 34910005 aagagcacgagttcgaggctccggatgacacctacat 34910041
>emb|Z82244.1|HS286B10 Human DNA sequence from clone CTA-286B10 on chromosome 22, complete sequence Length = 87869 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 gagaaggcccagaggagcaag 146 ||||||||||||||||||||| Sbjct: 1786 gagaaggcccagaggagcaag 1806
>emb|Z46944.1|CSNPHFDXN C.sinensis mRNA for non-photosynthetic ferredoxin Length = 690 Score = 42.1 bits (21), Expect = 3.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 345 gaagagcacgagtttgaggcccctgaagacacctacattctcgaggcagctga 397 |||||||| ||||||||||||| |||||| ||||| ||||| |||||||| Sbjct: 275 gaagagcatgagtttgaggcccaggaagaccagtacatcctcgatgcagctga 327
>gb|AY826849.1| Isochrysis galbana clone ISF1 chloroplast ferredoxin mRNA, partial cds; nuclear gene for chloroplast product Length = 764 Score = 42.1 bits (21), Expect = 3.1 Identities = 42/49 (85%) Strand = Plus / Plus Query: 478 tcgatcagtcggagggctccttcctcgatgagaaccagatgggcgaggg 526 |||| |||||||| ||||| |||||||| || ||||||||||| |||| Sbjct: 281 tcgaccagtcggacggctcgttcctcgacgacgaccagatgggccaggg 329
>gb|AC011317.23| Homo sapiens 3 BAC RP11-103G8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 147097 Score = 42.1 bits (21), Expect = 3.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 342 ggggaagagcacgagtttgaggcccctga 370 ||||||||||| ||||| ||||||||||| Sbjct: 45974 ggggaagagcaggagttggaggcccctga 45946
>dbj|AK121063.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058L21, full insert sequence Length = 857 Score = 42.1 bits (21), Expect = 3.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 346 aagagcacgagtttgaggcccctgaagacacctacat 382 ||||||||||||| ||||| || || ||||||||||| Sbjct: 334 aagagcacgagttcgaggctccggatgacacctacat 370 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 126,135,728 Number of extensions: 6654635 Number of successful extensions: 157102 Number of sequences better than 10.0: 48 Number of HSP's gapped: 157090 Number of HSP's successfully gapped: 66 Length of query: 820 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 798 Effective length of database: 18,508,616,841 Effective search space: 14769876239118 Effective search space used: 14769876239118 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
