>LOC_Os03g08800:12003.t00735:unspliced-genomic protein CutA, chloroplast precursor, putative, expressed|
Length = 1983
Score = 72.1 bits (151), Expect(6) = 1e-53
Identities = 30/33 (90%), Positives = 33/33 (100%)
Frame = +1 / +1
Query: 364 KVQTDAEELLIIKTRESLLNALTEHVKANHEYD 462
+VQTDAEELLIIKTRESLL+ALTEHVKANHEY+
Sbjct: 1423 QVQTDAEELLIIKTRESLLDALTEHVKANHEYE 1521
Score = 67.5 bits (141), Expect(6) = 1e-53
Identities = 30/38 (78%), Positives = 32/38 (84%)
Frame = +1 / +2
Query: 169 RFPFVRAISSARMESTSTTVPSIVVYVTVPNREAGKKL 282
+F VR +SSARMES STTVPSIVVYVTVPNREAG L
Sbjct: 407 KFLRVRGLSSARMESASTTVPSIVVYVTVPNREAGSTL 520
Score = 63.8 bits (133), Expect(6) = 1e-53
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +1 / +3
Query: 463 VPEVIALPISGGNLKYLEWLKNSTREN*SG 552
VPEVIALPI+GGN KYLEW+KNST+ N*SG
Sbjct: 1689 VPEVIALPITGGNTKYLEWIKNSTKAN*SG 1778
Score = 51.5 bits (106), Expect(6) = 1e-53
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +1 / +2
Query: 268 AGKKLSASIISEKLAACVNIVPGV 339
AGKKLS SIISEKLAACVNIVPG+
Sbjct: 767 AGKKLSQSIISEKLAACVNIVPGL 838
Score = 35.9 bits (72), Expect(6) = 1e-53
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +1 / +3
Query: 334 GVESVYWWEGKVQ 372
G+ESVYWWEGKV+
Sbjct: 1245 GIESVYWWEGKVR 1283
Score = 24.0 bits (46), Expect(6) = 1e-53
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +1
Query: 151 CALSARRFPFV 183
CA S RRFPF+
Sbjct: 148 CAFSRRRFPFL 180
Score = 71.2 bits (149), Expect(5) = 5e-43
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = -3 / -2
Query: 461 SYSWLALTCSVKAFRRDSLVLMMSNSSASVCT 366
SYSWLALTCSVKA RRDSLVL+MSNSSASVCT
Sbjct: 1520 SYSWLALTCSVKASRRDSLVLIMSNSSASVCT 1425
Score = 58.3 bits (121), Expect(5) = 5e-43
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = -3 / -3
Query: 551 PDQFSLVLFLSHSKYLRLPPLMGSAMTSGT 462
PDQF+LVLFL HS+YL LPP+MG A+TSGT
Sbjct: 1777 PDQFALVLFLIHSRYLVLPPVMGRAITSGT 1688
Score = 56.1 bits (116), Expect(5) = 5e-43
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = -3 / -1
Query: 275 LPASRFGTVTYTTMEGTVVEVDSILAEL 192
LPAS FGTVTYTTM+GTVVE DSI AEL
Sbjct: 513 LPASLFGTVTYTTMDGTVVEADSIRAEL 430
Score = 45.1 bits (92), Expect(5) = 5e-43
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = -3 / -1
Query: 335 PGTMFTQAASFSLIMLADSFLPA 267
PGT+ TQAASFSL+ML DSF PA
Sbjct: 834 PGTILTQAASFSLMMLCDSFFPA 766
Score = 29.5 bits (58), Expect(5) = 5e-43
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2 / -2
Query: 369 HLPLPPVNRFNSRHYVHTS 313
HL LPP+NRFN+ TS
Sbjct: 1280 HLSLPPINRFNA*KMYRTS 1224
Score = 61.1 bits (127), Expect(5) = 7e-29
Identities = 27/34 (79%), Positives = 30/34 (88%)
Frame = +3 / +3
Query: 366 GAN*C*RVAHHQDQRISPKCLD*TCQS*P*VRRS 467
GAN*C*RV H+QD RIS +CLD*TCQS*P*+R S
Sbjct: 1425 GAN*C*RVTHNQD*RISSRCLD*TCQS*P*IRVS 1526
Score = 48.7 bits (100), Expect(5) = 7e-29
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +3 / +1
Query: 189 NKFC*NGVYFHDRAFHCCICDCPKS*SR 272
++ C +GV FH RA HCC+CDC K SR
Sbjct: 427 SQLCSDGVRFHHRAIHCCVCDCSKQGSR 510
Score = 39.1 bits (79), Expect(5) = 7e-29
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 270 RQKAIG*HYQ*ETCCLCEHSAW 335
R++A+ H+Q*ET CLC++SAW
Sbjct: 769 REEAVTEHHQ*ETSCLCQYSAW 834
Score = 36.8 bits (74), Expect(5) = 7e-29
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +2 / +1
Query: 464 FLRSLRCPSAAATSNTWSGSRTAPGRIDLA 553
FL+ P T +TWSGSRTAP + DLA
Sbjct: 1690 FLKLSLFP*LVVTPSTWSGSRTAPRQTDLA 1779
Score = 25.4 bits (49), Expect(5) = 7e-29
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3 / +2
Query: 339 *ICLLVGGEGA 371
*ICLLVGG+GA
Sbjct: 1250 *ICLLVGGKGA 1282
Score = 59.3 bits (123), Expect(5) = 4e-23
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = -2 / -1
Query: 462 VVLMVSFDMFSQGI*ERFSGLDDEQLFSISLHL 364
+V MVSFDMFSQGI*+RFS LD E LFSISLHL
Sbjct: 1521 LVFMVSFDMFSQGI*KRFSSLDYE*LFSISLHL 1423
Score = 36.8 bits (74), Expect(5) = 4e-23
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -1 / -2
Query: 283 IAFCLLHDLGQSHIQQWKARSWK*TP 206
+ + LL L QSH QQW AR WK TP
Sbjct: 521 VKYYLLPCLEQSHTQQWMARWWKRTP 444
Score = 35.4 bits (71), Expect(5) = 4e-23
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -2 / -2
Query: 552 ARSILPGAVLEPLQVFEVAAADGQRNDLRN 463
ARS+ GAVL+PLQV V + G+ ++ RN
Sbjct: 1778 ARSVCLGAVLDPLQVLGVTTSYGKSDNFRN 1689
Score = 30.4 bits (60), Expect(5) = 4e-23
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -2 / -3
Query: 336 SRHYVHTSSKFLTDNASR*LFAC 268
+RHY+ TSS FLTD+A L C
Sbjct: 835 TRHYIDTSS*FLTDDAL*QLLPC 767
Score = 29.0 bits (57), Expect(5) = 4e-23
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -3 / -3
Query: 368 TFPSHQ*TDSTP 333
TFPSHQ*TDS P
Sbjct: 1279 TFPSHQ*TDSMP 1244
Score = 56.1 bits (116), Expect(5) = 1e-17
Identities = 27/33 (81%), Positives = 28/33 (84%)
Frame = -1 / -3
Query: 460 RTHG*L*HVQSRHLGEILWS***ATLQHQFAPS 362
R HG*L*HVQSRHL EIL S* * TLQHQFAP+
Sbjct: 1519 RIHG*L*HVQSRHLEEIL*S*L*VTLQHQFAPA 1421
Score = 33.6 bits (67), Expect(5) = 1e-17
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -1 / -1
Query: 550 QINSPWCCS*ATPSI*GCRR*WAAQ*PQE 464
QI+ PWCCS*+TP + W +* QE
Sbjct: 1776 QISLPWCCS*STPGTWCYHQLWEER*LQE 1690
Score = 31.3 bits (62), Expect(5) = 1e-17
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2 / -3
Query: 303 LTDNASR*LFACFTIWDSHIYNN 235
+T ++* CF +W+SHI+NN
Sbjct: 541 ITRTKTQ*STTCFPVWNSHIHNN 473
Score = 25.8 bits (50), Expect(5) = 1e-17
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -1 / -2
Query: 334 QALCSHKQQVSH**C 290
QAL HKQ VSH**C
Sbjct: 833 QALY*HKQLVSH**C 789
Score = 24.9 bits (48), Expect(5) = 1e-17
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / -1
Query: 370 APSPPTSKQIQ 338
AP PPT+KQIQ
Sbjct: 1281 APFPPTNKQIQ 1249
Score = 59.3 bits (123), Expect(3) = 1e-16
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = +2 / +2
Query: 365 RCKLMLKSCSSSRPENLS*MP*LNMSKLTMSTTFLRSL 478
RCKLMLKS S SR ENL *MP*LNMSKLTM+T+ L S+
Sbjct: 1424 RCKLMLKSYS*SRLENLF*MP*LNMSKLTMNTSKLHSV 1537
Score = 37.3 bits (75), Expect(3) = 1e-16
Identities = 18/29 (62%), Positives = 18/29 (62%)
Frame = +2 / +3
Query: 197 LLEWSLLPRPCLPLLYM*LSQIVKQAKSY 283
LL WS LP PC PLL M*L Q KQ Y
Sbjct: 435 LLGWSPLPPPCHPLLCM*LFQTGKQVVLY 521
Score = 34.5 bits (69), Expect(3) = 1e-16
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +3 / +2
Query: 465 S*GHCAAHQRRQPQILGVAQEQHQGELIW 551
S* + ++H Q+ GV QEQHQG+LIW
Sbjct: 1691 S*SYRSSHNWW*HQVPGVDQEQHQGKLIW 1777
>LOC_Os10g23204:12010.t01797:unspliced-genomic protein CutA, chloroplast precursor, putative, expressed|
Length = 5248
Score = 72.1 bits (151), Expect(5) = 3e-48
Identities = 30/33 (90%), Positives = 33/33 (100%)
Frame = +1 / +1
Query: 364 KVQTDAEELLIIKTRESLLNALTEHVKANHEYD 462
+VQTDAEELLIIKTRESLL+ALTEHVKANHEY+
Sbjct: 4558 QVQTDAEELLIIKTRESLLDALTEHVKANHEYE 4656
Score = 63.8 bits (133), Expect(5) = 3e-48
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +1 / +2
Query: 463 VPEVIALPISGGNLKYLEWLKNSTREN* 546
VPEVIALPI GGNLKYLEWLKNSTRE+*
Sbjct: 4775 VPEVIALPIKGGNLKYLEWLKNSTRES* 4858
Score = 59.7 bits (124), Expect(5) = 3e-48
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = +1 / +3
Query: 193 SSARMESTSTTVPSIVVYVTVPNREAG 273
+SARMESTSTTVPSIVVYVTVPN+EAG
Sbjct: 540 ASARMESTSTTVPSIVVYVTVPNKEAG 620
Score = 46.9 bits (96), Expect(5) = 3e-48
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +1 / +1
Query: 271 GKKLSASIISEKLAACVNIVPG 336
GK+L+ SIISEKLAACVNIVPG
Sbjct: 1849 GKRLAGSIISEKLAACVNIVPG 1914
Score = 41.4 bits (84), Expect(5) = 3e-48
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +1 / +3
Query: 319 VNIVPGVESVYWWEGKV 369
V++ PG+ESVYWWEGKV
Sbjct: 4359 VSLFPGIESVYWWEGKV 4409
Score = 64.8 bits (135), Expect(5) = 8e-40
Identities = 27/32 (84%), Positives = 28/32 (87%)
Frame = -3 / -3
Query: 461 SYSWLALTCSVKAFRRDSLVLMMSNSSASVCT 366
SYSWLA TCSV A RRDSLV MMS+SSASVCT
Sbjct: 4655 SYSWLAFTCSVNASRRDSLVFMMSSSSASVCT 4560
Score = 57.0 bits (118), Expect(5) = 8e-40
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = -3 / -2
Query: 539 SLVLFLSHSKYLRLPPLMGSAMTSGT 462
SLVLF SHS+YLRLPP MGSAMTSGT
Sbjct: 4851 SLVLFFSHSRYLRLPPFMGSAMTSGT 4774
Score = 53.3 bits (110), Expect(5) = 8e-40
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = -3 / -1
Query: 275 LPASRFGTVTYTTMEGTVVEVDSILAE 195
+PAS GTVTYTTMEGTVVEVDSI AE
Sbjct: 622 VPASLLGTVTYTTMEGTVVEVDSIRAE 542
Score = 42.8 bits (87), Expect(5) = 8e-40
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -3 / -3
Query: 338 TPGTMFTQAASFSLIMLADSFLP 270
+PGTMFTQAASFSLIML S P
Sbjct: 1916 SPGTMFTQAASFSLIMLPASLFP 1848
Score = 36.8 bits (74), Expect(5) = 8e-40
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -3 / -1
Query: 371 CTFPSHQ*TDSTPGTMFTQ 315
CTFPSHQ*TDS PG T+
Sbjct: 4411 CTFPSHQ*TDSIPGKRDTE 4355
Score = 49.2 bits (101), Expect(4) = 6e-25
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = +3 / +1
Query: 456 VRRS*GHCAAHQRRQPQILGVAQEQHQGEL 545
++RS* H AAH+RRQPQ+ GVA+EQH G+L
Sbjct: 4768 MQRS*SHRAAHKRRQPQVPGVAKEQH*GKL 4857
Score = 47.8 bits (98), Expect(4) = 6e-25
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +3 / +2
Query: 195 FC*NGVYFHDRAFHCCICD 251
FC NGVYFH AFHCC+CD
Sbjct: 542 FCSNGVYFHHCAFHCCVCD 598
Score = 43.2 bits (88), Expect(4) = 6e-25
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +3 / +3
Query: 270 RQKAIG*HYQ*ETCCLCEHSAW 335
R++A HY+*E CCLCEHSAW
Sbjct: 1848 RKEASWEHYK*EACCLCEHSAW 1913
Score = 43.2 bits (88), Expect(4) = 6e-25
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +3 / +3
Query: 366 GAN*C*RVAHHQDQRISPKCLD*TCQS*P*V 458
GAN*C*R AHH+D+ +S C+D T +S P*V
Sbjct: 4560 GAN*C*RTAHHKDKGVSS*CVDRTRESQP*V 4652
Score = 41.8 bits (85), Expect(4) = 5e-17
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = -2 / -2
Query: 462 VVLMVSFDMFSQGI*ERFSGLDDEQLFSISLHL 364
++LMV F +F Q I +R L DEQ FSISLHL
Sbjct: 4656 LILMVGFHVFGQRIKKRLPCLYDEQFFSISLHL 4558
Score = 40.5 bits (82), Expect(4) = 5e-17
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = -2 / -1
Query: 537 PGAVLEPLQVFEVAAADGQRNDLRNVVL 454
P AVL PLQV EVA+ GQR+D RN L
Sbjct: 4849 PSAVL*PLQVLEVASFYGQRDDFRNAAL 4766
Score = 37.3 bits (75), Expect(4) = 5e-17
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -1 / -2
Query: 250 SHIQQWKARSWK*TPF*Q 197
SH QQWKA+ WK*TPF Q
Sbjct: 597 SHTQQWKAQWWK*TPFEQ 544
Score = 36.3 bits (73), Expect(4) = 5e-17
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = -2 / -2
Query: 336 SRHYVHTSSKFLTDNASR*LFAC 268
+RHYVHTSSK LT NA * +C
Sbjct: 1914 TRHYVHTSSKLLTYNAPS*PLSC 1846
Score = 41.8 bits (85), Expect(3) = 3e-11
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2 / +3
Query: 455 STTFLRSLRCPSAAATSNTWSGSRTAPGR 541
+ FL+S RCP ATS+TWSG RTA G+
Sbjct: 4767 NAAFLKSSRCP*KEATSSTWSG*RTALGK 4853
Score = 38.6 bits (78), Expect(3) = 3e-11
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = +2 / +1
Query: 194 VLLEWSLLPRPCLPLLYM*LSQIVKQAKSYRLALSV 301
+LLEWSLLP CLPLL M* I KQ + L +
Sbjct: 541 LLLEWSLLPPLCLPLLCM*QFLIKKQVHCLYVTLDL 648
Score = 35.0 bits (70), Expect(3) = 3e-11
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +2 / +2
Query: 365 RCKLMLKSCSSSRPENLS*MP*LNMSKLTMS 457
RCKLMLK+CSS R +L M * N K TMS
Sbjct: 4559 RCKLMLKNCSS*RQGSLFLMR*PNT*KPTMS 4651
Score = 39.6 bits (80), Expect(3) = 1e-09
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = -1 / -3
Query: 550 QINSPWCCS*ATPSI*GCRR*WAAQ*PQER 461
+++ P CCS ATP *GC WAA+* QER
Sbjct: 4862 RVSFP*CCSLATPGT*GCLLLWAAR*LQER 4773
Score = 35.9 bits (72), Expect(3) = 1e-09
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = -1 / -1
Query: 457 THG*L*HVQSRHLGEILWS***ATLQHQFAPS 362
THG L V+S H E S **A LQHQFAP+
Sbjct: 4651 THGWLSRVRSTHQEETPLSL**AVLQHQFAPA 4556
Score = 34.1 bits (68), Expect(3) = 1e-09
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1 / -1
Query: 334 QALCSHKQQVSH**C*PIA 278
QALCSHKQQ SH *C +A
Sbjct: 1912 QALCSHKQQASHL*CSQLA 1856
>LOC_Os01g01470:12001.t00046:unspliced-genomic NAC domain-containing protein 77, putative, expressed|
Length = 1828
Score = 31.8 bits (63), Expect = 8.6
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2 / -2
Query: 482 CPSAAATSNTWSGSRTAPG 538
CPSAAA +TW+GS+ G
Sbjct: 1200 CPSAAAGGSTWTGSQQTAG 1144
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 396,286,732
Number of extensions: 6070302
Number of successful extensions: 24988
Number of sequences better than 10.0: 21
Length of query: 349
Length of database: 55,613,886
Length adjustment: 50
Effective length of query: 299
Effective length of database: 52,799,986
Effective search space: 15787195814
Effective search space used: 15787195814
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)