| Clone Name | FLbaf147m04 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK059646:Os03g0219500 | 191 | 2e-49 | 2 | AK106363:Os09g0270900 | 103 | 1e-22 | 3 | Os01g0866600:Os01g0866600 | 39 | 0.003 | 4 | AK120447:Os01g0128800 | 28 | 3.2 | 5 | AK101247:Os09g0441900 | 28 | 3.2 | 6 | AK060695:Os02g0691500 | 28 | 3.2 |
|---|
>AK059646:Os03g0219500 | Length = 102 Score = 191 bits (486), Expect = 2e-49 Identities = 97/102 (95%), Positives = 100/102 (98%) Frame = +3 Query: 84 MMGSRGTSAVLSRAARMRQKLQSALEASALDVEDVSYQHAGHAAVKDNANETHFNIKVIS 263 MM SRGTSA+LSRAARMRQKLQSALEASALD+EDVSYQHAGHAAVKDNANETHFNI+VIS Sbjct: 1 MMSSRGTSAMLSRAARMRQKLQSALEASALDIEDVSYQHAGHAAVKDNANETHFNIRVIS 60 Query: 264 PKFEGQSLVKRHRMVYDLLTDELNSGLHAISIVAKTPKELGS 389 PKFEGQSLVKRHRMVYDLLTDELNSGLHAISIVAKTPKE GS Sbjct: 61 PKFEGQSLVKRHRMVYDLLTDELNSGLHAISIVAKTPKESGS 102
>AK106363:Os09g0270900 | Length = 366 Score = 103 bits (256), Expect = 1e-22 Identities = 47/88 (53%), Positives = 64/88 (72%) Frame = +3 Query: 120 RAARMRQKLQSALEASALDVEDVSYQHAGHAAVKDNANETHFNIKVISPKFEGQSLVKRH 299 R R+++ L+ L L +ED+S+ H GHA V + ETHFN++V+S F+G+SL+KRH Sbjct: 279 RQERIKESLERGLSPVQLQIEDISHLHKGHAGVSGSNGETHFNVRVVSEAFQGKSLLKRH 338 Query: 300 RMVYDLLTDELNSGLHAISIVAKTPKEL 383 R VYDLL DEL +GLHA+SI AKTP E+ Sbjct: 339 RAVYDLLQDELKNGLHALSIDAKTPSEV 366
>Os01g0866600:Os01g0866600 | Length = 94 Score = 38.5 bits (88), Expect = 0.003 Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 1/80 (1%) Frame = +3 Query: 144 LQSALEASALDVEDVSYQHAGHAAVKDNANETHFNIKVISPKFEGQSLVKRHRMVYDLLT 323 + S+L S+L V D S G A + I+V+S KFEG+ L++RHRMV L Sbjct: 12 ITSSLSPSSLVVTDTS---GGCGA--------SYEIEVVSEKFEGKRLLERHRMVNTALA 60 Query: 324 DELNSGLHAISI-VAKTPKE 380 + + +HA+SI A TP + Sbjct: 61 PHM-AEIHAVSIKKALTPAQ 79
>AK120447:Os01g0128800 | Length = 620 Score = 28.5 bits (62), Expect = 3.2 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = -1 Query: 413 IKLKKLHS*SQLFWGFRNNGDSMKTRVQLIGQEI 312 IK+K + S +FW +N ++ R +L GQE+ Sbjct: 189 IKVKYVLDDSTIFWAIGHNSGAVAKRTELCGQEV 222
>AK101247:Os09g0441900 | Length = 444 Score = 28.5 bits (62), Expect = 3.2 Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 9/49 (18%) Frame = +2 Query: 110 CALTSCSDEAKAAVCFGGQCTRR*RCFLPTC---------WACGCQGQC 229 C+ CS + C G QC R CF +C + C C G C Sbjct: 309 CSTNCCSCKPSCNGCCGEQCCRCADCFSCSCPRCSSCFNIFKCSCAGCC 357
>AK060695:Os02g0691500 | Length = 373 Score = 28.5 bits (62), Expect = 3.2 Identities = 19/62 (30%), Positives = 32/62 (51%) Frame = +3 Query: 102 TSAVLSRAARMRQKLQSALEASALDVEDVSYQHAGHAAVKDNANETHFNIKVISPKFEGQ 281 T+A + A+ A A+AL E +G A ++ + ETH +++V+SP+ GQ Sbjct: 227 TTAASASASASASSSSPATVAAALQSE----HRSGLADIEVSLVETHASVRVMSPRRPGQ 282 Query: 282 SL 287 L Sbjct: 283 LL 284 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 14,584,649 Number of extensions: 305079 Number of successful extensions: 705 Number of sequences better than 10.0: 6 Number of HSP's gapped: 705 Number of HSP's successfully gapped: 7 Length of query: 188 Length of database: 15,399,855 Length adjustment: 95 Effective length of query: 93 Effective length of database: 11,595,960 Effective search space: 1078424280 Effective search space used: 1078424280 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)