ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf147m04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK059646:Os03g0219500 191 2e-49
2AK106363:Os09g0270900 103 1e-22
3Os01g0866600:Os01g0866600 39 0.003
4AK120447:Os01g0128800 28 3.2
5AK101247:Os09g0441900 28 3.2
6AK060695:Os02g0691500 28 3.2

>AK059646:Os03g0219500 |
          Length = 102
 Score =  191 bits (486), Expect = 2e-49
 Identities = 97/102 (95%), Positives = 100/102 (98%)
 Frame = +3

Query: 84  MMGSRGTSAVLSRAARMRQKLQSALEASALDVEDVSYQHAGHAAVKDNANETHFNIKVIS 263
           MM SRGTSA+LSRAARMRQKLQSALEASALD+EDVSYQHAGHAAVKDNANETHFNI+VIS
Sbjct: 1   MMSSRGTSAMLSRAARMRQKLQSALEASALDIEDVSYQHAGHAAVKDNANETHFNIRVIS 60

Query: 264 PKFEGQSLVKRHRMVYDLLTDELNSGLHAISIVAKTPKELGS 389
           PKFEGQSLVKRHRMVYDLLTDELNSGLHAISIVAKTPKE GS
Sbjct: 61  PKFEGQSLVKRHRMVYDLLTDELNSGLHAISIVAKTPKESGS 102



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>AK106363:Os09g0270900 |
          Length = 366

 Score =  103 bits (256), Expect = 1e-22
 Identities = 47/88 (53%), Positives = 64/88 (72%)
 Frame = +3

Query: 120 RAARMRQKLQSALEASALDVEDVSYQHAGHAAVKDNANETHFNIKVISPKFEGQSLVKRH 299
           R  R+++ L+  L    L +ED+S+ H GHA V  +  ETHFN++V+S  F+G+SL+KRH
Sbjct: 279 RQERIKESLERGLSPVQLQIEDISHLHKGHAGVSGSNGETHFNVRVVSEAFQGKSLLKRH 338

Query: 300 RMVYDLLTDELNSGLHAISIVAKTPKEL 383
           R VYDLL DEL +GLHA+SI AKTP E+
Sbjct: 339 RAVYDLLQDELKNGLHALSIDAKTPSEV 366



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>Os01g0866600:Os01g0866600 |
          Length = 94

 Score = 38.5 bits (88), Expect = 0.003
 Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
 Frame = +3

Query: 144 LQSALEASALDVEDVSYQHAGHAAVKDNANETHFNIKVISPKFEGQSLVKRHRMVYDLLT 323
           + S+L  S+L V D S    G  A         + I+V+S KFEG+ L++RHRMV   L 
Sbjct: 12  ITSSLSPSSLVVTDTS---GGCGA--------SYEIEVVSEKFEGKRLLERHRMVNTALA 60

Query: 324 DELNSGLHAISI-VAKTPKE 380
             + + +HA+SI  A TP +
Sbjct: 61  PHM-AEIHAVSIKKALTPAQ 79



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>AK120447:Os01g0128800 |
          Length = 620

 Score = 28.5 bits (62), Expect = 3.2
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -1

Query: 413 IKLKKLHS*SQLFWGFRNNGDSMKTRVQLIGQEI 312
           IK+K +   S +FW   +N  ++  R +L GQE+
Sbjct: 189 IKVKYVLDDSTIFWAIGHNSGAVAKRTELCGQEV 222



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>AK101247:Os09g0441900 |
          Length = 444

 Score = 28.5 bits (62), Expect = 3.2
 Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 9/49 (18%)
 Frame = +2

Query: 110 CALTSCSDEAKAAVCFGGQCTRR*RCFLPTC---------WACGCQGQC 229
           C+   CS +     C G QC R   CF  +C         + C C G C
Sbjct: 309 CSTNCCSCKPSCNGCCGEQCCRCADCFSCSCPRCSSCFNIFKCSCAGCC 357



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>AK060695:Os02g0691500 |
          Length = 373

 Score = 28.5 bits (62), Expect = 3.2
 Identities = 19/62 (30%), Positives = 32/62 (51%)
 Frame = +3

Query: 102 TSAVLSRAARMRQKLQSALEASALDVEDVSYQHAGHAAVKDNANETHFNIKVISPKFEGQ 281
           T+A  + A+        A  A+AL  E      +G A ++ +  ETH +++V+SP+  GQ
Sbjct: 227 TTAASASASASASSSSPATVAAALQSE----HRSGLADIEVSLVETHASVRVMSPRRPGQ 282

Query: 282 SL 287
            L
Sbjct: 283 LL 284


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 14,584,649
Number of extensions: 305079
Number of successful extensions: 705
Number of sequences better than 10.0: 6
Number of HSP's gapped: 705
Number of HSP's successfully gapped: 7
Length of query: 188
Length of database: 15,399,855
Length adjustment: 95
Effective length of query: 93
Effective length of database: 11,595,960
Effective search space: 1078424280
Effective search space used: 1078424280
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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