ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf150h01 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK068123:Os03g0310500 | 33 | 1.2 | 2 | AK105102:Os03g0688300 | 32 | 2.0 | 3 | AK070372:Os08g0288200 | 32 | 2.0 | 4 | AK070458:Os09g0455300 | 32 | 2.6 | 5 | AK060477:Os09g0455300 | 32 | 2.6 | 6 | AK064512:Os03g0359000 | 31 | 4.4 | 7 | AK066031:Os02g0824300 | 30 | 5.8 | 8 | AK059036:Os09g0501600 | 30 | 5.8 | 9 | Os04g0539800:Os04g0539800 | 30 | 9.9 | 10 | AK104368:Os05g0565200 | 30 | 9.9 | 11 | AK104200:Os05g0565200 | 30 | 9.9 | 12 | AK067090:Os05g0565200 | 30 | 9.9 |
|---|
>AK068123:Os03g0310500 | Length = 334 Score = 32.7 bits (73), Expect = 1.2 Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 4/102 (3%) Frame = +2 Query: 1097 EMLSLPLEERLK----KWFTEVSQVSQFVALMHLAPDCSEEDVLEILPVYADLVRGLWVC 1264 E L PL E +K K TE+ V +F + P+ +++E L Y D + G V Sbjct: 193 EHLKTPLGEPVKGKQNKSNTEL-WVEKFYKKVTTMPEPFPHELVERLEEYLDRLEGQLVD 251 Query: 1265 RSSLLYDDGLASKRDQIMLEFTKMESIPVKYVERLIRDERTR 1390 SSLLYD L Q + + +YVER++ ER + Sbjct: 252 LSSLLYDHRLVDAY-QNSSDILQSTIFTQQYVERVLSAERDK 292
>AK105102:Os03g0688300 | Length = 574 Score = 32.0 bits (71), Expect = 2.0 Identities = 29/126 (23%), Positives = 49/126 (38%) Frame = -3 Query: 967 VLACNITPSWFVSERNPRLRFFRGVLGTI*ALFSLDRWNSLDTSTTAICFHLLQRLPSTR 788 +L C + P W +E+ RG A F + W + + ++ +L P R Sbjct: 293 ILLCGVPPFWAETEQGVARAILRGA-----ADFDREPWPRISRAAKSLVRQMLDVDPRRR 347 Query: 787 STRNQMRL*RPQLHHRIKMIQMNHVASENPNGKVRYISRLR*GQCLRCQPQRPRNLRVVI 608 T Q+ L P LHH A+ PN + + R R Q + + +RV+ Sbjct: 348 PTAQQV-LDHPWLHH----------AARAPNVPLGDVVRARLKQFSLMNRLKKKAMRVIA 396 Query: 607 VALRID 590 L ++ Sbjct: 397 EHLSVE 402
>AK070372:Os08g0288200 | Length = 467 Score = 32.0 bits (71), Expect = 2.0 Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 1/145 (0%) Frame = +2 Query: 1193 DCSEEDVLEILPVYADLVRGLWVCRSSLLYDDGLASKRDQIMLEFTKMESIPVKYVERLI 1372 D +++ ++P Y+DL+ + DG Q+ + F +++S+ K E Sbjct: 114 DTYKQNSEAVIPTYSDLLNQI----------DG----NRQVEVVFNEIDSLLQKICE--- 156 Query: 1373 RDERTRNMILNPLGKRREKLQDYKFIVAADSSFIKRYPHIVKEQENAWSVRAATMLDPL- 1549 N N L K K QD K A+ + F + P + ++ +R D L Sbjct: 157 ------NASFNMLAKTNGKPQDSKDTTASKNEF-RGIPTRLNNIPHSREIRKYFYNDVLV 209 Query: 1550 ETRSATEQRKTKNSARSNIPVKGPD 1624 TR A E +KT+ NIP P+ Sbjct: 210 ATRHAVEDKKTRLQIDINIPELNPE 234
>AK070458:Os09g0455300 | Length = 236 Score = 31.6 bits (70), Expect = 2.6 Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 5/79 (6%) Frame = +2 Query: 884 GSKDPPKEPEPWISLTYEPAGSDVASKYYAEMVASEG-----RPIDFTMSTQDYAVSLCP 1048 G+ P P P +S+T AG +Y + M A+ G +DF MS+ Sbjct: 48 GTPSPQFSPPPQMSVTTTTAGGGYQDQYNS-MPATYGAGAGVHQLDFAMSSPGSD----S 102 Query: 1049 GGPTGSKNINRCQAIREML 1105 G P GS + + +A+REM+ Sbjct: 103 GAPQGSSSSSSSEAMREMI 121
>AK060477:Os09g0455300 | Length = 236 Score = 31.6 bits (70), Expect = 2.6 Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 5/79 (6%) Frame = +2 Query: 884 GSKDPPKEPEPWISLTYEPAGSDVASKYYAEMVASEG-----RPIDFTMSTQDYAVSLCP 1048 G+ P P P +S+T AG +Y + M A+ G +DF MS+ Sbjct: 48 GTPSPQFSPPPQMSVTTTTAGGGYQDQYNS-MPATYGAGAGVHQLDFAMSSPGSD----S 102 Query: 1049 GGPTGSKNINRCQAIREML 1105 G P GS + + +A+REM+ Sbjct: 103 GAPQGSSSSSSSEAMREMI 121
>AK064512:Os03g0359000 | Length = 454 Score = 30.8 bits (68), Expect = 4.4 Identities = 24/76 (31%), Positives = 35/76 (46%) Frame = +2 Query: 1496 KEQENAWSVRAATMLDPLETRSATEQRKTKNSARSNIPVKGPDTVMGKAKDGLVQGSENH 1675 + +EN + T+L+P S+T R T A P K T KAK VQ + NH Sbjct: 326 ENKENGCNGATVTVLEP--DASSTSARPTPTDA----PGKDVTTCSTKAKSPEVQSASNH 379 Query: 1676 VRSVLDSVFTANKVRS 1723 + SV T++ + S Sbjct: 380 TTNNAASVNTSSSLES 395
>AK066031:Os02g0824300 | Length = 394 Score = 30.4 bits (67), Expect = 5.8 Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 14/87 (16%) Frame = +2 Query: 731 HLDAVMQLRPSKPHLISGAS--------RARQPLQQVETNGGG------TGVQAVPSVKG 868 HLDAV P +P I G+ A P+ Q + GGG GV+ KG Sbjct: 47 HLDAVSAGYPFQPPHIGGSHIGQGYHHVDASAPVAQHGSGGGGGGMDIGMGVEMSADAKG 106 Query: 869 KERSDGSKDPPKEPEPWISLTYEPAGS 949 + S +D P + + Y+P G+ Sbjct: 107 DQGSGAGQDEPVKKKRGRPRKYKPDGA 133
>AK059036:Os09g0501600 | Length = 366 Score = 30.4 bits (67), Expect = 5.8 Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 1/89 (1%) Frame = +2 Query: 827 GGGTGVQAVPSVKGKERSDGSKDPPKEPEP-WISLTYEPAGSDVASKYYAEMVASEGRPI 1003 GGG G+ +P+V ER S++ +P W T G D A K A A+ G+ Sbjct: 49 GGGAGLFGLPAVGNAERGGCSREGSSVSDPAWAHAT--GGGGDNARKRKAPASAAAGKDK 106 Query: 1004 DFTMSTQDYAVSLCPGGPTGSKNINRCQA 1090 D + S C G + + +C+A Sbjct: 107 DAVVGG---GSSPCEVGEAKAPDSKKCKA 132
>Os04g0539800:Os04g0539800 | Length = 444 Score = 29.6 bits (65), Expect = 9.9 Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 2/164 (1%) Frame = +2 Query: 1580 TKNSARSNIPVKGPDTVMGKAKDGLVQGSENHVRSVLDSVFTANKVRSFPAVVRDLRHLA 1759 T N+ S+ + GKA+ + + N +R+ V + A + D RHLA Sbjct: 94 TGNTCTSDNTLSKAAMYYGKARSLMEKERGNMLRAFGTQVAEPLRAMVMGAPLEDARHLA 153 Query: 1760 VKYASNKKDEARFQALS-NAAQTCVSLSRKELDASIRLVAVPVHDLYVQKTEEKASVRNC 1936 +Y + EA QA+ + Q V S D +L A K EE +++ Sbjct: 154 QRY-DRMRQEAEAQAVEVSRRQNRVRESAPNGDVITKLEAAE------YKLEE---LKSS 203 Query: 1937 LIMLFR-GRASNGTVKKQEVIDCTLKLLKRKISEKEYHQAVTEI 2065 ++ L + A+ V+ Q+ +L+ +E+ YHQ V EI Sbjct: 204 MVGLGKEAVAAMAAVEAQQQRLTLQRLIAMVEAERAYHQRVLEI 247
>AK104368:Os05g0565200 | Length = 284 Score = 29.6 bits (65), Expect = 9.9 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +2 Query: 2015 LKRKISEKEYHQAVTEICFSNEDGHLVLKNGEMP 2116 L R + EK AVT F+ EDG ++K+G +P Sbjct: 102 LCRSLREKYSLAAVTNDIFTKEDGEFLIKHGALP 135
>AK104200:Os05g0565200 | Length = 284 Score = 29.6 bits (65), Expect = 9.9 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +2 Query: 2015 LKRKISEKEYHQAVTEICFSNEDGHLVLKNGEMP 2116 L R + EK AVT F+ EDG ++K+G +P Sbjct: 102 LCRSLREKYSLAAVTNDIFTKEDGEFLIKHGALP 135
>AK067090:Os05g0565200 | Length = 284 Score = 29.6 bits (65), Expect = 9.9 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +2 Query: 2015 LKRKISEKEYHQAVTEICFSNEDGHLVLKNGEMP 2116 L R + EK AVT F+ EDG ++K+G +P Sbjct: 102 LCRSLREKYSLAAVTNDIFTKEDGEFLIKHGALP 135 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 61,006,805 Number of extensions: 1353717 Number of successful extensions: 4157 Number of sequences better than 10.0: 12 Number of HSP's gapped: 4153 Number of HSP's successfully gapped: 12 Length of query: 788 Length of database: 15,399,855 Length adjustment: 109 Effective length of query: 679 Effective length of database: 11,035,386 Effective search space: 7493027094 Effective search space used: 7493027094 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
