| Clone Name | FLbaf147l07 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT835031.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA102O19, full insert sequence Length = 1169 Score = 755 bits (381), Expect = 0.0 Identities = 600/673 (89%) Strand = Plus / Plus Query: 190 cgcatatgtttccaaatgaaggcgcctcgtccagctcaacctctatgagcagccagaaga 249 |||| ||||||||| |||| || ||||||||||||||||||||| |||| || ||||||| Sbjct: 144 cgcacatgtttccatatgatggtgcctcgtccagctcaacctctctgagtagtcagaaga 203 Query: 250 gtgagacagatgatgacaagatgattgcaatggttcttgaagaagaatatgcgaagctag 309 | ||||| |||||||||| |||||||||||||| |||| ||||||||||| ||| ||| Sbjct: 204 gcgagactgatgatgacaggatgattgcaatgggtctttcggaagaatatgctaagttag 263 Query: 310 atggagcaatggccaagcgccttacgaatttgacatctattcctcatgttccccggatta 369 |||| || ||||||||||| || ||||||| |||||||||||||| || ||||| || | Sbjct: 264 atggtgctatggccaagcggctctcgaatttaacatctattcctcacgtcccccgaataa 323 Query: 370 atacatacttccccacatatagtgatgccaccatggatcatcatcgtcttcatgacaggt 429 | |||||||| || ||||| ||||||||||| ||||| |||||||| |||| || ||| Sbjct: 324 acacatactttccgacatacagtgatgccactatggaccatcatcgccttctcgataggc 383 Query: 430 taaatgcatatggcttgtttgaagtgagggtatcaggtgatggcaattgtcagttccgtg 489 |||||| |||||||||| ||||||||| || || || |||||||||||||||||||||| Sbjct: 384 taaatgtttatggcttgtatgaagtgagagtttctggcgatggcaattgtcagttccgtg 443 Query: 490 cactctcagaccagctatatcgatcacctgagtatcacaagcatgttcggaaagagatag 549 |||| ||||||||||||||||||||||| || ||||||||||||||||| || || |||| Sbjct: 444 cactatcagaccagctatatcgatcacccgattatcacaagcatgttcgaaaggaaatag 503 Query: 550 tgaagcagctcaaggcgtgtaactctttgtatgaggggcatgtcccaatgaaatataaac 609 |||||||||||||||| ||||||||||||||||| || |||| |||||||||||||||| Sbjct: 504 tgaagcagctcaaggcatgtaactctttgtatgaaggttatgttccaatgaaatataaac 563 Query: 610 actattgcaagaagatgaaaaaatctggggaatggggagaccatgtcacattgcaagcag 669 | |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| | Sbjct: 564 attattgcaagaagatgaaaaaatctggtgaatggggcgaccatgtcacattgcaagctg 623 Query: 670 ctgctgataagtttgctgcgaagatatgccttctaacatctttcagagatacctgttttg 729 ||||||||||||||||||| || ||||||||||||||||| |||||||| || ||||||| Sbjct: 624 ctgctgataagtttgctgcaaaaatatgccttctaacatcattcagagacacatgttttg 683 Query: 730 tagaaattgttccacagtatcaggctccacagagagagctttggctaagtttctggtccg 789 | ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| | Sbjct: 684 ttgaaattgttccacagtatcaggcaccacagagagaaatttggctaagtttctggtcag 743 Query: 790 aaattcactacaactcactatatgatgctcgagatctcccgagcaaatacaagcctagaa 849 |||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 744 aaattcactataactcgctatatgatgctcgagatctccctagcaaatacaagcctagga 803 Query: 850 agaagcactggtt 862 ||||||||||||| Sbjct: 804 agaagcactggtt 816
>dbj|AK240901.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065034F04, full insert sequence Length = 2640 Score = 755 bits (381), Expect = 0.0 Identities = 600/673 (89%) Strand = Plus / Plus Query: 190 cgcatatgtttccaaatgaaggcgcctcgtccagctcaacctctatgagcagccagaaga 249 |||| ||||||||| |||| || ||||||||||||||||||||| |||| || ||||||| Sbjct: 228 cgcacatgtttccatatgatggtgcctcgtccagctcaacctctctgagtagtcagaaga 287 Query: 250 gtgagacagatgatgacaagatgattgcaatggttcttgaagaagaatatgcgaagctag 309 | ||||| |||||||||| ||||||||||||||||||| ||||||||||| ||| ||| Sbjct: 288 gcgagactgatgatgacaggatgattgcaatggttctttcggaagaatatgctaagttag 347 Query: 310 atggagcaatggccaagcgccttacgaatttgacatctattcctcatgttccccggatta 369 |||| || ||||||||||| || ||||||| |||||||||||||| || ||||| || | Sbjct: 348 atggtgctatggccaagcggctctcgaatttaacatctattcctcacgtcccccgaataa 407 Query: 370 atacatacttccccacatatagtgatgccaccatggatcatcatcgtcttcatgacaggt 429 | |||||||| || ||||| ||||||||||| ||||| |||||||| |||| || ||| Sbjct: 408 acacatactttccgacatacagtgatgccactatggaccatcatcgccttctcgataggc 467 Query: 430 taaatgcatatggcttgtttgaagtgagggtatcaggtgatggcaattgtcagttccgtg 489 |||||| |||||||||| ||||||||| || || || |||||||||||||||||||||| Sbjct: 468 taaatgtttatggcttgtatgaagtgagagtttctggcgatggcaattgtcagttccgtg 527 Query: 490 cactctcagaccagctatatcgatcacctgagtatcacaagcatgttcggaaagagatag 549 |||| ||||||||||||||||||||||| || ||||||||||||||||| || || |||| Sbjct: 528 cactatcagaccagctatatcgatcacccgattatcacaagcatgttcgaaaggaaatag 587 Query: 550 tgaagcagctcaaggcgtgtaactctttgtatgaggggcatgtcccaatgaaatataaac 609 |||||||||||||||| ||||||||||||||||| || |||| |||||||||||||||| Sbjct: 588 tgaagcagctcaaggcatgtaactctttgtatgaaggttatgttccaatgaaatataaac 647 Query: 610 actattgcaagaagatgaaaaaatctggggaatggggagaccatgtcacattgcaagcag 669 | |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| | Sbjct: 648 attattgcaagaagatgaaaaaatctggtgaatggggcgaccatgtcacattgcaagctg 707 Query: 670 ctgctgataagtttgctgcgaagatatgccttctaacatctttcagagatacctgttttg 729 ||||||||||||||||||| || ||||||||||||||||| |||||||| || ||||||| Sbjct: 708 ctgctgataagtttgctgcaaaaatatgccttctaacatcattcagagacacatgttttg 767 Query: 730 tagaaattgttccacagtatcaggctccacagagagagctttggctaagtttctggtccg 789 | ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| | Sbjct: 768 ttgaaattgttccacagtatcaggcaccacagagagaaatttggctaagtttctggtcgg 827 Query: 790 aaattcactacaactcactatatgatgctcgagatctcccgagcaaatacaagcctagaa 849 || ||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 828 aagttcactataactcgctatatgatgctcgagatctccctagcaaatacaagcctagga 887 Query: 850 agaagcactggtt 862 ||||||||||||| Sbjct: 888 agaagcactggtt 900
>ref|NM_001059228.1| Oryza sativa (japonica cultivar-group) Os04g0402300 (Os04g0402300) mRNA, complete cds Length = 660 Score = 696 bits (351), Expect = 0.0 Identities = 564/635 (88%) Strand = Plus / Plus Query: 190 cgcatatgtttccaaatgaaggcgcctcgtccagctcaacctctatgagcagccagaaga 249 |||| ||||||||| |||| || ||||||||||||||||||||| |||| || ||||||| Sbjct: 5 cgcacatgtttccatatgatggtgcctcgtccagctcaacctctctgagtagtcagaaga 64 Query: 250 gtgagacagatgatgacaagatgattgcaatggttcttgaagaagaatatgcgaagctag 309 | ||||| |||||||||| ||||||||||||||||||| ||||||||||| ||| ||| Sbjct: 65 gcgagactgatgatgacaggatgattgcaatggttctttcggaagaatatgctaagttag 124 Query: 310 atggagcaatggccaagcgccttacgaatttgacatctattcctcatgttccccggatta 369 |||| || ||||||||||| || ||||||| |||||||||||||| || ||||| || | Sbjct: 125 atggtgctatggccaagcggctctcgaatttaacatctattcctcacgtcccccgaataa 184 Query: 370 atacatacttccccacatatagtgatgccaccatggatcatcatcgtcttcatgacaggt 429 | |||||||| || ||||| ||||||||||| ||||| |||||||| |||| || ||| Sbjct: 185 acacatactttccgacatacagtgatgccactatggaccatcatcgccttctcgataggc 244 Query: 430 taaatgcatatggcttgtttgaagtgagggtatcaggtgatggcaattgtcagttccgtg 489 |||||| |||||||||| ||||||||| || || || |||||||||||||||||||||| Sbjct: 245 taaatgtttatggcttgtatgaagtgagagtttctggcgatggcaattgtcagttccgtg 304 Query: 490 cactctcagaccagctatatcgatcacctgagtatcacaagcatgttcggaaagagatag 549 |||| ||||||||||||||||||||||| || ||||||||||||||||| || || |||| Sbjct: 305 cactatcagaccagctatatcgatcacccgattatcacaagcatgttcgaaaggaaatag 364 Query: 550 tgaagcagctcaaggcgtgtaactctttgtatgaggggcatgtcccaatgaaatataaac 609 |||||||||||||||| ||||||||||||||||| || |||| |||||||||||||||| Sbjct: 365 tgaagcagctcaaggcatgtaactctttgtatgaaggttatgttccaatgaaatataaac 424 Query: 610 actattgcaagaagatgaaaaaatctggggaatggggagaccatgtcacattgcaagcag 669 | |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| | Sbjct: 425 attattgcaagaagatgaaaaaatctggtgaatggggcgaccatgtcacattgcaagctg 484 Query: 670 ctgctgataagtttgctgcgaagatatgccttctaacatctttcagagatacctgttttg 729 ||||||||||||||||||| || ||||||||||||||||| |||||||| || ||||||| Sbjct: 485 ctgctgataagtttgctgcaaaaatatgccttctaacatcattcagagacacatgttttg 544 Query: 730 tagaaattgttccacagtatcaggctccacagagagagctttggctaagtttctggtccg 789 | ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| | Sbjct: 545 ttgaaattgttccacagtatcaggcaccacagagagaaatttggctaagtttctggtcgg 604 Query: 790 aaattcactacaactcactatatgatgctcgagat 824 || ||||||| ||||| |||||||||||||||||| Sbjct: 605 aagttcactataactcgctatatgatgctcgagat 639
>gb|AY109494.1| Zea mays CL9836_1 mRNA sequence Length = 1122 Score = 662 bits (334), Expect = 0.0 Identities = 589/674 (87%) Strand = Plus / Minus Query: 192 catatgtttccaaatgaaggcgcctcgtccagctcaacctctatgagcagccagaagagt 251 ||||||||||||| ||||| ||||| || ||||||||||| ||||||||||||| |||| Sbjct: 1012 catatgtttccaagggaaggtgcctcatctagctcaacctcaatgagcagccagaggagt 953 Query: 252 gagacagatgatgacaagatgattgcaatggttcttgaagaagaatatgcgaagctagat 311 || || ||||||| | |||||||||||||||||| ||||||||||| ||| ||||| Sbjct: 952 gaaactcatgatgataggatgattgcaatggttctctccgaagaatatgccaagttagat 893 Query: 312 ggagcaatggccaagcgccttacgaatttgacatctattcctcatgttccccggattaat 371 || || ||||||||||| ||||| ||||| ||||| ||||| ||||||||||| ||||| Sbjct: 892 ggtgctatggccaagcgtcttactaatttaacatcaattccccatgttccccgtattaac 833 Query: 372 acatacttccccacatatagtgatgccaccatggatcatcatcgtcttcatgacaggtta 431 ||||||||||| ||||||||||||||||| ||||| ||| |||| || | |||||||||| Sbjct: 832 acatacttcccaacatatagtgatgccactatggaccattatcgcctccttgacaggtta 773 Query: 432 aatgcatatggcttgtttgaagtgagggtatcaggtgatggcaattgtcagttccgtgca 491 |||||||| ||||||||||| ||||| || || |||||||| ||||||||||| |||||| Sbjct: 772 aatgcatacggcttgtttgaggtgagagtgtctggtgatggaaattgtcagtttcgtgca 713 Query: 492 ctctcagaccagctatatcgatcacctgagtatcacaagcatgttcggaaagagatagtg 551 ||||||||||| |||||| ||||||| || ||||||||||||||||| || ||||| || Sbjct: 712 ctctcagaccaactatatagatcacccgattatcacaagcatgttcgaaaggagattgta 653 Query: 552 aagcagctcaaggcgtgtaactctttgtatgaggggcatgtcccaatgaaatataaacac 611 ||||||||||||| |||||| | || ||||| || | || ||||||||||||||||| Sbjct: 652 aagcagctcaaggaatgtaacaccttatatgaaggttacgttccaatgaaatataaacat 593 Query: 612 tattgcaagaagatgaaaaaatctggggaatggggagaccatgtcacattgcaagcagct 671 ||||||||||| ||||| || | ||| |||||||| ||||||||||| | ||||||||| Sbjct: 592 tattgcaagaaaatgaagaagtatggtgaatggggtgaccatgtcacgctacaagcagct 533 Query: 672 gctgataagtttgctgcgaagatatgccttctaacatctttcagagatacctgttttgta 731 ||||| ||||||||||| |||||||| ||||||||||| |||||||||||||||||||| Sbjct: 532 gctgacaagtttgctgcaaagatatgtcttctaacatcattcagagatacctgttttgtt 473 Query: 732 gaaattgttccacagtatcaggctccacagagagagctttggctaagtttctggtccgaa 791 ||||||||||| || ||||| ||||||||||||||| ||||||| ||||||||||||||| Sbjct: 472 gaaattgttccgcaatatcaagctccacagagagagatttggctgagtttctggtccgaa 413 Query: 792 attcactacaactcactatatgatgctcgagatctcccgagcaaatacaagcctagaaag 851 ||||||| |||||||| || ||||||||||||||||| ||||||||||||||||||||| Sbjct: 412 gttcactataactcactgtacgatgctcgagatctccctagcaaatacaagcctagaaag 353 Query: 852 aagcactggttgtt 865 ||||| |||||||| Sbjct: 352 aagcattggttgtt 339
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 161 bits (81), Expect = 7e-36 Identities = 153/177 (86%) Strand = Plus / Plus Query: 177 aggttgggcatggcgcatatgtttccaaatgaaggcgcctcgtccagctcaacctctatg 236 ||||||| ||| |||| ||||||||| |||| || ||||||||||||||||||||| || Sbjct: 19943141 aggttggaaatgacgcacatgtttccatatgatggtgcctcgtccagctcaacctctctg 19943200 Query: 237 agcagccagaagagtgagacagatgatgacaagatgattgcaatggttcttgaagaagaa 296 || || |||||||| ||||| |||||||||| ||||||||||||||||||| |||||| Sbjct: 19943201 agtagtcagaagagcgagactgatgatgacaggatgattgcaatggttctttcggaagaa 19943260 Query: 297 tatgcgaagctagatggagcaatggccaagcgccttacgaatttgacatctattcct 353 ||||| ||| ||||||| || ||||||||||| || ||||||| |||||||||||| Sbjct: 19943261 tatgctaagttagatggtgctatggccaagcggctctcgaatttaacatctattcct 19943317 Score = 117 bits (59), Expect = 9e-23 Identities = 80/87 (91%) Strand = Plus / Plus Query: 679 agtttgctgcgaagatatgccttctaacatctttcagagatacctgttttgtagaaattg 738 |||||||||| || ||||||||||||||||| |||||||| || |||||||| ||||||| Sbjct: 19945149 agtttgctgcaaaaatatgccttctaacatcattcagagacacatgttttgttgaaattg 19945208 Query: 739 ttccacagtatcaggctccacagagag 765 |||||||||||||||| |||||||||| Sbjct: 19945209 ttccacagtatcaggcaccacagagag 19945235 Score = 105 bits (53), Expect = 4e-19 Identities = 71/77 (92%) Strand = Plus / Plus Query: 481 agttccgtgcactctcagaccagctatatcgatcacctgagtatcacaagcatgttcgga 540 ||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| | Sbjct: 19944261 agttccgtgcactatcagaccagctatatcgatcacccgattatcacaagcatgttcgaa 19944320 Query: 541 aagagatagtgaagcag 557 | || |||||||||||| Sbjct: 19944321 aggaaatagtgaagcag 19944337 Score = 103 bits (52), Expect = 1e-18 Identities = 70/76 (92%) Strand = Plus / Plus Query: 556 agctcaaggcgtgtaactctttgtatgaggggcatgtcccaatgaaatataaacactatt 615 |||||||||| ||||||||||||||||| || |||| ||||||||||||||||| |||| Sbjct: 19944588 agctcaaggcatgtaactctttgtatgaaggttatgttccaatgaaatataaacattatt 19944647 Query: 616 gcaagaagatgaaaaa 631 |||||||||||||||| Sbjct: 19944648 gcaagaagatgaaaaa 19944663 Score = 75.8 bits (38), Expect = 3e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 769 tttggctaagtttctggtccgaaattcactacaactcactatatgatgctcgag 822 ||||||||||||||||||| ||| ||||||| ||||| |||||||||||||||| Sbjct: 19945490 tttggctaagtttctggtcggaagttcactataactcgctatatgatgctcgag 19945543 Score = 73.8 bits (37), Expect = 1e-09 Identities = 46/49 (93%) Strand = Plus / Plus Query: 632 atctggggaatggggagaccatgtcacattgcaagcagctgctgataag 680 |||||| |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 19944761 atctggtgaatggggcgaccatgtcacattgcaagctgctgctgataag 19944809 Score = 67.9 bits (34), Expect = 8e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 821 agatctcccgagcaaatacaagcctagaaagaagcactggtt 862 ||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 19945653 agatctccctagcaaatacaagcctaggaagaagcactggtt 19945694 Score = 50.1 bits (25), Expect = 0.018 Identities = 43/49 (87%) Strand = Plus / Plus Query: 372 acatacttccccacatatagtgatgccaccatggatcatcatcgtcttc 420 |||||||| || ||||| ||||||||||| ||||| |||||||| |||| Sbjct: 19943466 acatactttccgacatacagtgatgccactatggaccatcatcgccttc 19943514 Score = 50.1 bits (25), Expect = 0.018 Identities = 40/45 (88%) Strand = Plus / Plus Query: 438 tatggcttgtttgaagtgagggtatcaggtgatggcaattgtcag 482 |||||||||| ||||||||| || || || ||||||||||||||| Sbjct: 19944113 tatggcttgtatgaagtgagagtttctggcgatggcaattgtcag 19944157
>emb|AL607005.3|OSJN00124 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0118P14, complete sequence Length = 158312 Score = 161 bits (81), Expect = 7e-36 Identities = 153/177 (86%) Strand = Plus / Plus Query: 177 aggttgggcatggcgcatatgtttccaaatgaaggcgcctcgtccagctcaacctctatg 236 ||||||| ||| |||| ||||||||| |||| || ||||||||||||||||||||| || Sbjct: 5804 aggttggaaatgacgcacatgtttccatatgatggtgcctcgtccagctcaacctctctg 5863 Query: 237 agcagccagaagagtgagacagatgatgacaagatgattgcaatggttcttgaagaagaa 296 || || |||||||| ||||| |||||||||| ||||||||||||||||||| |||||| Sbjct: 5864 agtagtcagaagagcgagactgatgatgacaggatgattgcaatggttctttcggaagaa 5923 Query: 297 tatgcgaagctagatggagcaatggccaagcgccttacgaatttgacatctattcct 353 ||||| ||| ||||||| || ||||||||||| || ||||||| |||||||||||| Sbjct: 5924 tatgctaagttagatggtgctatggccaagcggctctcgaatttaacatctattcct 5980 Score = 117 bits (59), Expect = 9e-23 Identities = 80/87 (91%) Strand = Plus / Plus Query: 679 agtttgctgcgaagatatgccttctaacatctttcagagatacctgttttgtagaaattg 738 |||||||||| || ||||||||||||||||| |||||||| || |||||||| ||||||| Sbjct: 7812 agtttgctgcaaaaatatgccttctaacatcattcagagacacatgttttgttgaaattg 7871 Query: 739 ttccacagtatcaggctccacagagag 765 |||||||||||||||| |||||||||| Sbjct: 7872 ttccacagtatcaggcaccacagagag 7898 Score = 105 bits (53), Expect = 4e-19 Identities = 71/77 (92%) Strand = Plus / Plus Query: 481 agttccgtgcactctcagaccagctatatcgatcacctgagtatcacaagcatgttcgga 540 ||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| | Sbjct: 6924 agttccgtgcactatcagaccagctatatcgatcacccgattatcacaagcatgttcgaa 6983 Query: 541 aagagatagtgaagcag 557 | || |||||||||||| Sbjct: 6984 aggaaatagtgaagcag 7000 Score = 103 bits (52), Expect = 1e-18 Identities = 70/76 (92%) Strand = Plus / Plus Query: 556 agctcaaggcgtgtaactctttgtatgaggggcatgtcccaatgaaatataaacactatt 615 |||||||||| ||||||||||||||||| || |||| ||||||||||||||||| |||| Sbjct: 7251 agctcaaggcatgtaactctttgtatgaaggttatgttccaatgaaatataaacattatt 7310 Query: 616 gcaagaagatgaaaaa 631 |||||||||||||||| Sbjct: 7311 gcaagaagatgaaaaa 7326 Score = 75.8 bits (38), Expect = 3e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 769 tttggctaagtttctggtccgaaattcactacaactcactatatgatgctcgag 822 ||||||||||||||||||| ||| ||||||| ||||| |||||||||||||||| Sbjct: 8153 tttggctaagtttctggtcggaagttcactataactcgctatatgatgctcgag 8206 Score = 73.8 bits (37), Expect = 1e-09 Identities = 46/49 (93%) Strand = Plus / Plus Query: 632 atctggggaatggggagaccatgtcacattgcaagcagctgctgataag 680 |||||| |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 7424 atctggtgaatggggcgaccatgtcacattgcaagctgctgctgataag 7472 Score = 67.9 bits (34), Expect = 8e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 821 agatctcccgagcaaatacaagcctagaaagaagcactggtt 862 ||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 8316 agatctccctagcaaatacaagcctaggaagaagcactggtt 8357 Score = 50.1 bits (25), Expect = 0.018 Identities = 43/49 (87%) Strand = Plus / Plus Query: 372 acatacttccccacatatagtgatgccaccatggatcatcatcgtcttc 420 |||||||| || ||||| ||||||||||| ||||| |||||||| |||| Sbjct: 6129 acatactttccgacatacagtgatgccactatggaccatcatcgccttc 6177 Score = 50.1 bits (25), Expect = 0.018 Identities = 40/45 (88%) Strand = Plus / Plus Query: 438 tatggcttgtttgaagtgagggtatcaggtgatggcaattgtcag 482 |||||||||| ||||||||| || || || ||||||||||||||| Sbjct: 6776 tatggcttgtatgaagtgagagtttctggcgatggcaattgtcag 6820
>emb|AL606610.3|OSJN00045 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E08, complete sequence Length = 106975 Score = 161 bits (81), Expect = 7e-36 Identities = 153/177 (86%) Strand = Plus / Plus Query: 177 aggttgggcatggcgcatatgtttccaaatgaaggcgcctcgtccagctcaacctctatg 236 ||||||| ||| |||| ||||||||| |||| || ||||||||||||||||||||| || Sbjct: 97949 aggttggaaatgacgcacatgtttccatatgatggtgcctcgtccagctcaacctctctg 98008 Query: 237 agcagccagaagagtgagacagatgatgacaagatgattgcaatggttcttgaagaagaa 296 || || |||||||| ||||| |||||||||| ||||||||||||||||||| |||||| Sbjct: 98009 agtagtcagaagagcgagactgatgatgacaggatgattgcaatggttctttcggaagaa 98068 Query: 297 tatgcgaagctagatggagcaatggccaagcgccttacgaatttgacatctattcct 353 ||||| ||| ||||||| || ||||||||||| || ||||||| |||||||||||| Sbjct: 98069 tatgctaagttagatggtgctatggccaagcggctctcgaatttaacatctattcct 98125 Score = 117 bits (59), Expect = 9e-23 Identities = 80/87 (91%) Strand = Plus / Plus Query: 679 agtttgctgcgaagatatgccttctaacatctttcagagatacctgttttgtagaaattg 738 |||||||||| || ||||||||||||||||| |||||||| || |||||||| ||||||| Sbjct: 99957 agtttgctgcaaaaatatgccttctaacatcattcagagacacatgttttgttgaaattg 100016 Query: 739 ttccacagtatcaggctccacagagag 765 |||||||||||||||| |||||||||| Sbjct: 100017 ttccacagtatcaggcaccacagagag 100043 Score = 105 bits (53), Expect = 4e-19 Identities = 71/77 (92%) Strand = Plus / Plus Query: 481 agttccgtgcactctcagaccagctatatcgatcacctgagtatcacaagcatgttcgga 540 ||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| | Sbjct: 99069 agttccgtgcactatcagaccagctatatcgatcacccgattatcacaagcatgttcgaa 99128 Query: 541 aagagatagtgaagcag 557 | || |||||||||||| Sbjct: 99129 aggaaatagtgaagcag 99145 Score = 103 bits (52), Expect = 1e-18 Identities = 70/76 (92%) Strand = Plus / Plus Query: 556 agctcaaggcgtgtaactctttgtatgaggggcatgtcccaatgaaatataaacactatt 615 |||||||||| ||||||||||||||||| || |||| ||||||||||||||||| |||| Sbjct: 99396 agctcaaggcatgtaactctttgtatgaaggttatgttccaatgaaatataaacattatt 99455 Query: 616 gcaagaagatgaaaaa 631 |||||||||||||||| Sbjct: 99456 gcaagaagatgaaaaa 99471 Score = 75.8 bits (38), Expect = 3e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 769 tttggctaagtttctggtccgaaattcactacaactcactatatgatgctcgag 822 ||||||||||||||||||| ||| ||||||| ||||| |||||||||||||||| Sbjct: 100298 tttggctaagtttctggtcggaagttcactataactcgctatatgatgctcgag 100351 Score = 73.8 bits (37), Expect = 1e-09 Identities = 46/49 (93%) Strand = Plus / Plus Query: 632 atctggggaatggggagaccatgtcacattgcaagcagctgctgataag 680 |||||| |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 99569 atctggtgaatggggcgaccatgtcacattgcaagctgctgctgataag 99617 Score = 67.9 bits (34), Expect = 8e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 821 agatctcccgagcaaatacaagcctagaaagaagcactggtt 862 ||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 100461 agatctccctagcaaatacaagcctaggaagaagcactggtt 100502 Score = 50.1 bits (25), Expect = 0.018 Identities = 43/49 (87%) Strand = Plus / Plus Query: 372 acatacttccccacatatagtgatgccaccatggatcatcatcgtcttc 420 |||||||| || ||||| ||||||||||| ||||| |||||||| |||| Sbjct: 98274 acatactttccgacatacagtgatgccactatggaccatcatcgccttc 98322 Score = 50.1 bits (25), Expect = 0.018 Identities = 40/45 (88%) Strand = Plus / Plus Query: 438 tatggcttgtttgaagtgagggtatcaggtgatggcaattgtcag 482 |||||||||| ||||||||| || || || ||||||||||||||| Sbjct: 98921 tatggcttgtatgaagtgagagtttctggcgatggcaattgtcag 98965
>gb|AY104940.1| Zea mays PCO149645 mRNA sequence Length = 752 Score = 113 bits (57), Expect = 1e-21 Identities = 87/97 (89%) Strand = Plus / Plus Query: 679 agtttgctgcgaagatatgccttctaacatctttcagagatacctgttttgtagaaattg 738 |||||||||| |||||||| || |||||||| ||||||||||| |||||||| ||||||| Sbjct: 654 agtttgctgcaaagatatgtctcctaacatcattcagagatacatgttttgttgaaattg 713 Query: 739 ttccacagtatcaggctccacagagagagctttggct 775 |||| || ||||| ||||||||||||||| ||||||| Sbjct: 714 ttccgcaatatcaagctccacagagagagatttggct 750
>ref|NM_111073.3| Arabidopsis thaliana cysteine-type peptidase (AT3G02070) mRNA, complete cds Length = 1042 Score = 63.9 bits (32), Expect = 1e-06 Identities = 260/336 (77%) Strand = Plus / Plus Query: 392 tgatgccaccatggatcatcatcgtcttcatgacaggttaaatgcatatggcttgtttga 451 |||||||||| ||||||| || || |||| | | |||||||||| || || |||| ||| Sbjct: 368 tgatgccaccttggatcaccaacgccttcttcaaaggttaaatgtttacggtttgtgtga 427 Query: 452 agtgagggtatcaggtgatggcaattgtcagttccgtgcactctcagaccagctatatcg 511 ||| ||| || |||||||| || || |||||||| || || || |||||| |||| || Sbjct: 428 gttgaaggtctctggtgatggaaactgccagttccgagccctttctgaccagttataccg 487 Query: 512 atcacctgagtatcacaagcatgttcggaaagagatagtgaagcagctcaaggcgtgtaa 571 ||| || ||||| |||||||| || ||| ||| | || || |||||||| | |||| Sbjct: 488 atctccagagtaccacaagcaagtgaggagagaagttgttaaacagctcaaagagtgtcg 547 Query: 572 ctctttgtatgaggggcatgtcccaatgaaatataaacactattgcaagaagatgaaaaa 631 ||| ||||||| | |||| || |||||||| |||| |||| |||||||||| ||| Sbjct: 548 ttctatgtatgaaagttatgttccgatgaaatacaaacgatattacaagaagatgggaaa 607 Query: 632 atctggggaatggggagaccatgtcacattgcaagcagctgctgataagtttgctgcgaa 691 || ||| ||||||||||||||| | || | ||||| || || |||| |||||| || || Sbjct: 608 atttggagaatggggagaccatattaccctacaagctgcggcagataggtttgcagcaaa 667 Query: 692 gatatgccttctaacatctttcagagatacctgttt 727 ||||||| | || ||||| || ||||| || ||||| Sbjct: 668 gatatgcttgctgacatcctttagagacacttgttt 703
>gb|BT012408.1| Arabidopsis thaliana At3g02070 mRNA, complete cds Length = 660 Score = 63.9 bits (32), Expect = 1e-06 Identities = 260/336 (77%) Strand = Plus / Plus Query: 392 tgatgccaccatggatcatcatcgtcttcatgacaggttaaatgcatatggcttgtttga 451 |||||||||| ||||||| || || |||| | | |||||||||| || || |||| ||| Sbjct: 183 tgatgccaccttggatcaccaacgccttcttcaaaggttaaatgtttacggtttgtgtga 242 Query: 452 agtgagggtatcaggtgatggcaattgtcagttccgtgcactctcagaccagctatatcg 511 ||| ||| || |||||||| || || |||||||| || || || |||||| |||| || Sbjct: 243 gttgaaggtctctggtgatggaaactgccagttccgagccctttctgaccagttataccg 302 Query: 512 atcacctgagtatcacaagcatgttcggaaagagatagtgaagcagctcaaggcgtgtaa 571 ||| || ||||| |||||||| || ||| ||| | || || |||||||| | |||| Sbjct: 303 atctccagagtaccacaagcaagtgaggagagaagttgttaaacagctcaaagagtgtcg 362 Query: 572 ctctttgtatgaggggcatgtcccaatgaaatataaacactattgcaagaagatgaaaaa 631 ||| ||||||| | |||| || |||||||| |||| |||| |||||||||| ||| Sbjct: 363 ttctatgtatgaaagttatgttccgatgaaatacaaacgatattacaagaagatgggaaa 422 Query: 632 atctggggaatggggagaccatgtcacattgcaagcagctgctgataagtttgctgcgaa 691 || ||| ||||||||||||||| | || | ||||| || || |||| |||||| || || Sbjct: 423 atttggagaatggggagaccatattaccctacaagctgcggcagataggtttgcagcaaa 482 Query: 692 gatatgccttctaacatctttcagagatacctgttt 727 ||||||| | || ||||| || ||||| || ||||| Sbjct: 483 gatatgcttgctgacatcctttagagacacttgttt 518
>gb|BT012213.1| Arabidopsis thaliana At3g02070 gene, complete cds Length = 1036 Score = 63.9 bits (32), Expect = 1e-06 Identities = 260/336 (77%) Strand = Plus / Plus Query: 392 tgatgccaccatggatcatcatcgtcttcatgacaggttaaatgcatatggcttgtttga 451 |||||||||| ||||||| || || |||| | | |||||||||| || || |||| ||| Sbjct: 262 tgatgccaccttggatcaccaacgccttcttcaaaggttaaatgtttacggtttgtgtga 321 Query: 452 agtgagggtatcaggtgatggcaattgtcagttccgtgcactctcagaccagctatatcg 511 ||| ||| || |||||||| || || |||||||| || || || |||||| |||| || Sbjct: 322 gttgaaggtctctggtgatggaaactgccagttccgagccctttctgaccagttataccg 381 Query: 512 atcacctgagtatcacaagcatgttcggaaagagatagtgaagcagctcaaggcgtgtaa 571 ||| || ||||| |||||||| || ||| ||| | || || |||||||| | |||| Sbjct: 382 atctccagagtaccacaagcaagtgaggagagaagttgttaaacagctcaaagagtgtcg 441 Query: 572 ctctttgtatgaggggcatgtcccaatgaaatataaacactattgcaagaagatgaaaaa 631 ||| ||||||| | |||| || |||||||| |||| |||| |||||||||| ||| Sbjct: 442 ttctatgtatgaaagttatgttccgatgaaatacaaacgatattacaagaagatgggaaa 501 Query: 632 atctggggaatggggagaccatgtcacattgcaagcagctgctgataagtttgctgcgaa 691 || ||| ||||||||||||||| | || | ||||| || || |||| |||||| || || Sbjct: 502 atttggagaatggggagaccatattaccctacaagctgcggcagataggtttgcagcaaa 561 Query: 692 gatatgccttctaacatctttcagagatacctgttt 727 ||||||| | || ||||| || ||||| || ||||| Sbjct: 562 gatatgcttgctgacatcctttagagacacttgttt 597
>ref|NM_001052550.1| Oryza sativa (japonica cultivar-group) Os02g0168600 (Os02g0168600) mRNA, complete cds Length = 1105 Score = 58.0 bits (29), Expect = 7e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 618 aagaagatgaaaaaatctggggaatggggagaccatgtcacattgcaagcagctgctgat 677 ||||| ||||||| |||||| ||||||||||| ||||| || || ||||| ||||| || Sbjct: 617 aagaaaatgaaaagatctggagaatggggagatcatgtgaccttacaagcggctgcagac 676 Query: 678 aagtttgctgcgaagatatgccttctaacatctttcagaga 718 ||||||||| ||||| ||||| || ||||| || ||||| Sbjct: 677 cggtttgctgccaagatttgcctgctgacatcatttagaga 717
>dbj|AK067291.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104L05, full insert sequence Length = 1107 Score = 58.0 bits (29), Expect = 7e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 618 aagaagatgaaaaaatctggggaatggggagaccatgtcacattgcaagcagctgctgat 677 ||||| ||||||| |||||| ||||||||||| ||||| || || ||||| ||||| || Sbjct: 618 aagaaaatgaaaagatctggagaatggggagatcatgtgaccttacaagcggctgcagac 677 Query: 678 aagtttgctgcgaagatatgccttctaacatctttcagaga 718 ||||||||| ||||| ||||| || ||||| || ||||| Sbjct: 678 cggtttgctgccaagatttgcctgctgacatcatttagaga 718
>dbj|AK227651.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL14-23-M04 Length = 1066 Score = 54.0 bits (27), Expect = 0.001 Identities = 105/131 (80%) Strand = Plus / Plus Query: 597 atgaaatataaacactattgcaagaagatgaaaaaatctggggaatggggagaccatgtc 656 |||||||| |||| |||| |||||||||| ||||| ||| ||||||||||||||| | Sbjct: 587 atgaaatacaaacgatattacaagaagatgggaaaatttggagaatggggagaccatatt 646 Query: 657 acattgcaagcagctgctgataagtttgctgcgaagatatgccttctaacatctttcaga 716 || | ||||| || || |||| |||||| || ||||||||| | || ||||| || ||| Sbjct: 647 accctacaagctgcggcagataggtttgcagcaaagatatgcttgctgacatcctttaga 706 Query: 717 gatacctgttt 727 || || ||||| Sbjct: 707 gacacttgttt 717
>emb|BX823675.1|CNS0A5G2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS65ZG01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1179 Score = 54.0 bits (27), Expect = 0.001 Identities = 90/111 (81%) Strand = Plus / Plus Query: 588 catgtcccaatgaaatataaacactattgcaagaagatgaaaaaatctggggaatgggga 647 ||||| || |||||||| |||| |||| |||||||||| ||||| ||| ||||||||| Sbjct: 747 catgttccgatgaaatacaaacgatattacaagaagatgggaaaatttggagaatgggga 806 Query: 648 gaccatgtcacattgcaagcagctgctgataagtttgctgcgaagatatgc 698 |||||| | || | ||||| || || |||| |||||| || ||||||||| Sbjct: 807 gaccatattaccctacaagctgcggcagataggtttgcagcaaagatatgc 857
>emb|CT828534.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA120D20, full insert sequence Length = 981 Score = 48.1 bits (24), Expect = 0.072 Identities = 48/56 (85%) Strand = Plus / Plus Query: 618 aagaagatgaaaaaatctggggaatggggagaccatgtcacattgcaagcagctgc 673 ||||| ||||||| ||||||||||||||| || ||| | || || ||||||||||| Sbjct: 377 aagaaaatgaaaagatctggggaatggggggatcatctgactttacaagcagctgc 432
>emb|CT831969.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA116C13, full insert sequence Length = 1176 Score = 48.1 bits (24), Expect = 0.072 Identities = 48/56 (85%) Strand = Plus / Plus Query: 618 aagaagatgaaaaaatctggggaatggggagaccatgtcacattgcaagcagctgc 673 ||||| ||||||| ||||||||||||||| || ||| | || || ||||||||||| Sbjct: 573 aagaaaatgaaaagatctggggaatggggggatcatctgactttacaagcagctgc 628
>emb|CT831968.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA103B16, full insert sequence Length = 1469 Score = 48.1 bits (24), Expect = 0.072 Identities = 48/56 (85%) Strand = Plus / Plus Query: 618 aagaagatgaaaaaatctggggaatggggagaccatgtcacattgcaagcagctgc 673 ||||| ||||||| ||||||||||||||| || ||| | || || ||||||||||| Sbjct: 872 aagaaaatgaaaagatctggggaatggggggatcatctgactttacaagcagctgc 927
>ref|NM_001064860.1| Oryza sativa (japonica cultivar-group) Os06g0669800 (Os06g0669800) mRNA, complete cds Length = 1224 Score = 48.1 bits (24), Expect = 0.072 Identities = 48/56 (85%) Strand = Plus / Plus Query: 618 aagaagatgaaaaaatctggggaatggggagaccatgtcacattgcaagcagctgc 673 ||||| ||||||| ||||||||||||||| || ||| | || || ||||||||||| Sbjct: 620 aagaaaatgaaaagatctggggaatggggggatcatctgactttacaagcagctgc 675
>dbj|AK073551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044I12, full insert sequence Length = 1227 Score = 48.1 bits (24), Expect = 0.072 Identities = 48/56 (85%) Strand = Plus / Plus Query: 618 aagaagatgaaaaaatctggggaatggggagaccatgtcacattgcaagcagctgc 673 ||||| ||||||| ||||||||||||||| || ||| | || || ||||||||||| Sbjct: 622 aagaaaatgaaaagatctggggaatggggggatcatctgactttacaagcagctgc 677
>gb|AY106393.1| Zea mays PCO117653 mRNA sequence Length = 1006 Score = 48.1 bits (24), Expect = 0.072 Identities = 66/80 (82%) Strand = Plus / Plus Query: 618 aagaagatgaaaaaatctggggaatggggagaccatgtcacattgcaagcagctgctgat 677 ||||| ||||||| |||||||||||||| || ||||| || || || |||||||| || Sbjct: 571 aagaaaatgaaaaggtctggggaatggggtgatcatgtgaccttacaggcagctgcagac 630 Query: 678 aagtttgctgcgaagatatg 697 | ||||||||| || ||||| Sbjct: 631 aggtttgctgctaaaatatg 650 Score = 48.1 bits (24), Expect = 0.072 Identities = 24/24 (100%) Strand = Plus / Plus Query: 762 agagagctttggctaagtttctgg 785 |||||||||||||||||||||||| Sbjct: 715 agagagctttggctaagtttctgg 738
>gb|BT026351.1| Arabidopsis thaliana At3g22260 gene, complete cds Length = 738 Score = 46.1 bits (23), Expect = 0.28 Identities = 56/67 (83%) Strand = Plus / Plus Query: 589 atgtcccaatgaaatataaacactattgcaagaagatgaaaaaatctggggaatggggag 648 |||| ||||||||||| | |||||| || ||||||||||||| ||| |||||||||| Sbjct: 446 atgtgccaatgaaatacagacactacaccaggaagatgaaaaaacatggtgaatggggag 505 Query: 649 accatgt 655 | ||||| Sbjct: 506 atcatgt 512
>ref|NM_202623.1| Arabidopsis thaliana cysteine-type peptidase (AT3G22260) mRNA, complete cds Length = 1065 Score = 46.1 bits (23), Expect = 0.28 Identities = 56/67 (83%) Strand = Plus / Plus Query: 589 atgtcccaatgaaatataaacactattgcaagaagatgaaaaaatctggggaatggggag 648 |||| ||||||||||| | |||||| || ||||||||||||| ||| |||||||||| Sbjct: 601 atgtgccaatgaaatacagacactacaccaggaagatgaaaaaacatggtgaatggggag 660 Query: 649 accatgt 655 | ||||| Sbjct: 661 atcatgt 667
>ref|NM_113124.1| Arabidopsis thaliana cysteine-type peptidase (AT3G22260) mRNA, complete cds Length = 1145 Score = 46.1 bits (23), Expect = 0.28 Identities = 56/67 (83%) Strand = Plus / Plus Query: 589 atgtcccaatgaaatataaacactattgcaagaagatgaaaaaatctggggaatggggag 648 |||| ||||||||||| | |||||| || ||||||||||||| ||| |||||||||| Sbjct: 717 atgtgccaatgaaatacagacactacaccaggaagatgaaaaaacatggtgaatggggag 776 Query: 649 accatgt 655 | ||||| Sbjct: 777 atcatgt 783
>gb|AY085012.1| Arabidopsis thaliana clone 124466 mRNA, complete sequence Length = 1145 Score = 46.1 bits (23), Expect = 0.28 Identities = 56/67 (83%) Strand = Plus / Plus Query: 589 atgtcccaatgaaatataaacactattgcaagaagatgaaaaaatctggggaatggggag 648 |||| ||||||||||| | |||||| || ||||||||||||| ||| |||||||||| Sbjct: 717 atgtgccaatgaaatacagacactacaccaggaagatgaaaaaacatggtgaatggggag 776 Query: 649 accatgt 655 | ||||| Sbjct: 777 atcatgt 783
>emb|AL161507.2|ATCHRIV19 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 19 Length = 183181 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Minus Query: 253 agacagatgatgacaagatgatt 275 ||||||||||||||||||||||| Sbjct: 6249 agacagatgatgacaagatgatt 6227
>emb|BX825915.1|CNS0A7ID Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL72ZC06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1066 Score = 46.1 bits (23), Expect = 0.28 Identities = 56/67 (83%) Strand = Plus / Plus Query: 589 atgtcccaatgaaatataaacactattgcaagaagatgaaaaaatctggggaatggggag 648 |||| ||||||||||| | |||||| || ||||||||||||| ||| |||||||||| Sbjct: 601 atgtgccaatgaaatacagacactacaccaggaagatgaaaaaacatggtgaatggggag 660 Query: 649 accatgt 655 | ||||| Sbjct: 661 atcatgt 667
>gb|AF147259.1|F10A2 Arabidopsis thaliana BAC F10A2 Length = 123080 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Minus Query: 253 agacagatgatgacaagatgatt 275 ||||||||||||||||||||||| Sbjct: 63231 agacagatgatgacaagatgatt 63209
>gb|AY106408.1| Zea mays PCO069200 mRNA sequence Length = 1098 Score = 44.1 bits (22), Expect = 1.1 Identities = 34/38 (89%) Strand = Plus / Plus Query: 468 gatggcaattgtcagttccgtgcactctcagaccagct 505 |||||||| ||||||||||| ||||| ||||| ||||| Sbjct: 222 gatggcaactgtcagttccgagcactatcagatcagct 259
>emb|CT831967.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA018E10, full insert sequence Length = 1218 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 618 aagaagatgaaaaaatctggggaatgggg 646 ||||| ||||||| ||||||||||||||| Sbjct: 619 aagaaaatgaaaagatctggggaatgggg 647
>gb|DQ511327.1| Uncultured fungus clone Toolik_Aug2004_tussock_183 18S small subunit ribosomal RNA gene, partial sequence Length = 311 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 486 cgtgcactctcagaccagcta 506 ||||||||||||||||||||| Sbjct: 194 cgtgcactctcagaccagcta 174
>gb|AC170189.2| Mus musculus BAC clone RP23-103L12 from chromosome 3, complete sequence Length = 204731 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 278 aatggttcttgaagaagaata 298 ||||||||||||||||||||| Sbjct: 169018 aatggttcttgaagaagaata 169038
>gb|AC118594.6| Mus musculus chromosome 1, clone RP24-479J20, complete sequence Length = 209825 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1015 gtgcagttataatcagatata 1035 ||||||||||||||||||||| Sbjct: 8489 gtgcagttataatcagatata 8469
>gb|AC127685.4| Mus musculus BAC clone RP24-176M3 from chromosome 3, complete sequence Length = 166417 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 278 aatggttcttgaagaagaata 298 ||||||||||||||||||||| Sbjct: 81389 aatggttcttgaagaagaata 81369
>gb|AC122185.4| Mus musculus BAC clone RP23-18J13 from chromosome 15, complete sequence Length = 202485 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 448 ttgaagtgagggtatcaggtg 468 ||||||||||||||||||||| Sbjct: 130611 ttgaagtgagggtatcaggtg 130631
>gb|AC122249.4| Mus musculus BAC clone RP23-164F15 from 1, complete sequence Length = 207471 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1015 gtgcagttataatcagatata 1035 ||||||||||||||||||||| Sbjct: 101269 gtgcagttataatcagatata 101249
>gb|AC098743.3| Mus musculus BAC clone RP23-122O4 from 1, complete sequence Length = 225868 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1015 gtgcagttataatcagatata 1035 ||||||||||||||||||||| Sbjct: 220288 gtgcagttataatcagatata 220268
>gb|AC093863.3| Homo sapiens BAC clone RP11-552I10 from 4, complete sequence Length = 164278 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 696 tgccttctaacatctttcaga 716 ||||||||||||||||||||| Sbjct: 11303 tgccttctaacatctttcaga 11283
>emb|AL603767.4| Human DNA sequence from clone RP11-430F18 on chromosome 6, complete sequence Length = 95877 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 tggggaaatattttccttggt 58 ||||||||||||||||||||| Sbjct: 42876 tggggaaatattttccttggt 42856
>emb|AL359986.15| Human DNA sequence from clone RP11-106M14 on chromosome 10 Contains the PPP1R3C gene for protein phosphatase 1 regulatory (inhibitor) subunit 3C, a glyceraldehyde-3-phosphate dehydrogenase (GAPD) pseudogene and a CpG island, complete sequence Length = 173119 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 961 ctctgcttttctccaccggag 981 ||||||||||||||||||||| Sbjct: 148396 ctctgcttttctccaccggag 148416
>gb|AY954969.1| Bacteriophage G1, complete genome Length = 138715 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 831 agcaaatacaagcctagaaag 851 ||||||||||||||||||||| Sbjct: 100788 agcaaatacaagcctagaaag 100768
>emb|AL844480.29| Mouse DNA sequence from clone RP23-190B10 on chromosome 4, complete sequence Length = 175199 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 749 tcaggctccacagagagagct 769 ||||||||||||||||||||| Sbjct: 85936 tcaggctccacagagagagct 85956 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 212,949,537 Number of extensions: 11012660 Number of successful extensions: 264424 Number of sequences better than 10.0: 42 Number of HSP's gapped: 264423 Number of HSP's successfully gapped: 67 Length of query: 1170 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1147 Effective length of database: 18,503,978,556 Effective search space: 21224063403732 Effective search space used: 21224063403732 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)