ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf150f21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DQ245292.1| Zea mays clone 14335 mRNA sequence 230 9e-57
2ref|NM_001049214.1| Oryza sativa (japonica cultivar-group) Os01g... 174 4e-40
3dbj|AK101084.1| Oryza sativa (japonica cultivar-group) cDNA clon... 174 4e-40
4gb|AY112642.1| Zea mays CL17031_1 mRNA sequence 96 3e-16
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 86 3e-13
6dbj|AP001080.1| Oryza sativa (japonica cultivar-group) genomic D... 86 3e-13
7dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic D... 86 3e-13
8gb|AC118289.2| Oryza sativa (japonica cultivar-group) chromosome... 72 5e-09
9dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 72 5e-09
10dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 62 5e-06
11emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete ... 56 3e-04
12ref|NM_001056968.1| Oryza sativa (japonica cultivar-group) Os03g... 48 0.069
13gb|AC146865.11| Medicago truncatula clone mth2-36m14, complete s... 46 0.27
14emb|BX017720.1|CNS08LU4 Single read from an extremity of a full-... 46 0.27
15emb|BX017719.1|CNS08LU3 Single read from an extremity of a full-... 46 0.27
16emb|BX017195.1|CNS08LFJ Single read from an extremity of a full-... 46 0.27
17emb|BX017194.1|CNS08LFI Single read from an extremity of a full-... 46 0.27
18emb|BX007670.1|CNS08E2Y Single read from an extremity of a full-... 46 0.27
19emb|BX007669.1|CNS08E2X Single read from an extremity of a full-... 46 0.27
20emb|BX005577.1|CNS08CGT Single read from an extremity of a full-... 46 0.27
21emb|BX005576.1|CNS08CGS Single read from an extremity of a full-... 46 0.27
22ref|XM_563945.1| Anopheles gambiae str. PEST ENSANGP00000025662 ... 46 0.27
23ref|XM_309717.2| Anopheles gambiae str. PEST ENSANGP00000012703 ... 46 0.27
24ref|XM_001216508.1| Aspergillus terreus NIH2624 hypothetical pro... 44 1.1
25ref|XM_518815.2| PREDICTED: Pan troglodytes nesprin 1, transcrip... 44 1.1
26ref|XM_001138443.1| PREDICTED: Pan troglodytes nesprin 1, transc... 44 1.1
27ref|XM_001139525.1| PREDICTED: Pan troglodytes nesprin 1, transc... 44 1.1
28gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete s... 44 1.1
29tpg|BK000543.1| TPA_exp: Homo sapiens spectrin-like protein of t... 44 1.1
30gb|AC115484.2| Drosophila melanogaster clone BACR06K01, complete... 44 1.1
31ref|NM_033071.1| Homo sapiens spectrin repeat containing, nuclea... 44 1.1
32gb|AC129591.4| Mus musculus BAC clone RP24-510A3 from chromosome... 44 1.1
33ref|NM_182961.1| Homo sapiens spectrin repeat containing, nuclea... 44 1.1
34ref|NM_135922.2| Drosophila melanogaster CG3793-RA (CG3793), mRNA 44 1.1
35dbj|AK127076.1| Homo sapiens cDNA FLJ45133 fis, clone BRAWH30380... 44 1.1
36dbj|AK122691.1| Homo sapiens cDNA FLJ16153 fis, clone BRAMY30002... 44 1.1
37gb|BC090927.1| Homo sapiens spectrin repeat containing, nuclear ... 44 1.1
38gb|AC150032.3| Rhinolophus ferrumequinum clone VMRC7-372J13, com... 44 1.1
39gb|AF444779.1|AF444779 Homo sapiens myocyte inner nuclear membra... 44 1.1
40ref|NM_133650.1| Homo sapiens spectrin repeat containing, nuclea... 44 1.1
41ref|NM_015293.1| Homo sapiens spectrin repeat containing, nuclea... 44 1.1
42emb|AL078582.13|HSDJ130E4 Human DNA sequence from clone RP1-130E... 44 1.1
43gb|AY051573.1| Drosophila melanogaster GH21948 full length cDNA 44 1.1
44gb|AY184206.1| Homo sapiens nesprin-1 beta 2 mRNA, complete cds 44 1.1
45gb|AY184203.1| Homo sapiens nesprin-1 alpha 2 mRNA, complete cds 44 1.1
46emb|BX647837.1|HSM807983 Homo sapiens mRNA; cDNA DKFZp451B1511 (... 44 1.1
47emb|BX537837.1|HSM805932 Homo sapiens mRNA; cDNA DKFZp686K0193 (... 44 1.1
48emb|AL833542.1|HSM804855 Homo sapiens mRNA; cDNA DKFZp686G133 (f... 44 1.1
49gb|AC146617.3| Mus musculus BAC clone RP23-14M15 from 14, comple... 44 1.1
50gb|AF043290.1|AF043290 Homo sapiens lymphocyte membrane associat... 44 1.1
51emb|AL833657.1|HSM804970 Homo sapiens mRNA; cDNA DKFZp667A1721 (... 44 1.1
52dbj|AB018339.2| Homo sapiens mRNA for KIAA0796 protein, partial cds 44 1.1
53ref|XM_001223270.1| Chaetomium globosum CBS 148.51 hypothetical ... 42 4.2
54gb|CP000413.1| Lactobacillus gasseri ATCC 33323, complete genome 42 4.2
55ref|XM_001141596.1| PREDICTED: Pan troglodytes hypothetical prot... 42 4.2
56ref|XM_001093254.1| PREDICTED: Macaca mulatta similar to oligode... 42 4.2
57ref|XM_001093033.1| PREDICTED: Macaca mulatta similar to oligode... 42 4.2
58ref|XM_001092917.1| PREDICTED: Macaca mulatta similar to oligode... 42 4.2
59ref|XM_001093146.1| PREDICTED: Macaca mulatta similar to oligode... 42 4.2
60gb|BT017614.1| Zea mays clone EL01N0433D01.c mRNA sequence 42 4.2
61gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genom... 42 4.2
62ref|XM_588802.2| PREDICTED: Bos taurus similar to oligodendrocyt... 42 4.2
63gb|AC133098.7| Mus musculus BAC clone RP23-336L12 from chromosom... 42 4.2
64dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 4.2
65emb|AL133325.20| Human DNA sequence from clone RP5-984P4 on chro... 42 4.2
66dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromo... 42 4.2
67emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete ... 42 4.2
68emb|BX640422.1| Bordetella pertussis strain Tohama I, complete g... 42 4.2
69emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete ... 42 4.2
70dbj|AP003611.3| Oryza sativa (japonica cultivar-group) genomic D... 42 4.2
71dbj|AP003287.3| Oryza sativa (japonica cultivar-group) genomic D... 42 4.2
72gb|AF269579.1|AF269579 Staphylococcus epidermidis strain SR1 clo... 42 4.2
73gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome 42 4.2
74gb|AF092365.1|AF092365 Cynolebias whitei tRNA-Ile gene, partial ... 42 4.2
75gb|AY105457.1| Zea mays PCO149506 mRNA sequence 42 4.2
76gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete g... 42 4.2
77gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 42 4.2
78emb|AL845438.21| Zebrafish DNA sequence from clone CH211-120G21 ... 42 4.2
79gb|L10720.1|BPETOXOP Bordetella pertussis toxin liberation operon 42 4.2 
>gb|DQ245292.1| Zea mays clone 14335 mRNA sequence
          Length = 1193
 Score =  230 bits (116), Expect = 9e-57
 Identities = 242/284 (85%)
 Strand = Plus / Plus

                                                                       
Query: 616 tcattgttgaactttcatcaggaaaagaggttgccgacgtccttccaaacatcgaagaaa 675
           ||||||| || |||||||||||||| |||||||| ||  || |||| |||||  | ||||
Sbjct: 633 tcattgtggagctttcatcaggaaaggaggttgctgatatcattcctaacattcatgaaa 692

                                                                       
Query: 676 ttagaaagtgtgccggcagaggcgtgattgttacagcaccggcgcctgctggatcgggct 735
           ||  ||||||| ||||||||||  | ||||||||||  || |||||||||||||| ||||
Sbjct: 693 ttgaaaagtgttccggcagaggaattattgttacagggccagcgcctgctggatctggct 752

                                                                       
Query: 736 atgacttcttcacacgttttttctgcccaaaatttgggattgatgaggatccggtatgtg 795
           | ||||||||||| ||||||||||||||||||||||| || ||||||||||| || ||||
Sbjct: 753 acgacttcttcacgcgttttttctgcccaaaatttggaatagatgaggatcccgtttgtg 812

                                                                       
Query: 796 gcagtgcacactgtgttttggcaccctattggggtggaaagctggggaaacaaaaactgg 855
           |||||||||| |||||||| ||||| || |||||||| |||||||||||||| |||||| 
Sbjct: 813 gcagtgcacattgtgttttagcaccttactggggtgggaagctggggaaacacaaactga 872

                                                       
Query: 856 tagcgtttcaggtatctccaaggagcgggacactatacctggag 899
           |||||||||| | ||| ||  |||| || | |||||||||||||
Sbjct: 873 tagcgtttcaagcatcccctcggagtggaatactatacctggag 916



 Score =  113 bits (57), Expect = 1e-21
 Identities = 93/105 (88%)
 Strand = Plus / Plus

                                                                       
Query: 288 ccgcggttccacctccgctggttcacccccgtcacggaggtcgcgctctgcgggcacgcg 347
           |||| |||||| ||||| ||||||||||||||| | ||||| | ||||||||| ||||| 
Sbjct: 302 ccgctgttccagctccgatggttcacccccgtcgctgaggtggagctctgcggccacgcc 361

                                                        
Query: 348 acgctggccaccgcccacttcctcttcacgtccgtcctcgcggag 392
           ||||||||  ||||||||||||||||||| |||||||||||||||
Sbjct: 362 acgctggcttccgcccacttcctcttcacatccgtcctcgcggag 406



 Score = 69.9 bits (35), Expect = 2e-08
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                      
Query: 105 gtggtggatgccttcacggcccagccgttcaagggcaacccggccgcggtatgcttcct 163
           |||||||| |||||||||||  ||||||||||||||||||| |||||||| ||| ||||
Sbjct: 128 gtggtggacgccttcacggcggagccgttcaagggcaacccagccgcggtgtgcctcct 186



 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                       
Query: 198 cggtggatgcagtccgtcgccgtcgagttcaacctctcccagac 241
           |||||||||||||||||||||| |||||||||| ||||| ||||
Sbjct: 215 cggtggatgcagtccgtcgccgccgagttcaacatctccgagac 258



 Score = 58.0 bits (29), Expect = 7e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 479 gaagctgttcattgagctggacttccccatgattgac 515
           ||||||||||||||||||||| ||||||| |||||||
Sbjct: 499 gaagctgttcattgagctggatttccccacgattgac 535
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>ref|NM_001049214.1| Oryza sativa (japonica cultivar-group) Os01g0266500 (Os01g0266500)
            mRNA, complete cds
          Length = 1159

 Score =  174 bits (88), Expect = 4e-40
 Identities = 244/296 (82%)
 Strand = Plus / Plus

                                                                        
Query: 672  gaaattagaaagtgtgccggcagaggcgtgattgttacagcaccggcgcctgctggatcg 731
            ||||||| ||| ||||  || ||||| || |||||||| | ||| || ||||||||||| 
Sbjct: 708  gaaattaaaaaatgtgatggtagaggagttattgttacgggaccagcacctgctggatct 767

                                                                        
Query: 732  ggctatgacttcttcacacgttttttctgcccaaaatttgggattgatgaggatccggta 791
            |  |||||||||||  |||| || |||||||||||||||||||| ||||||||||| || 
Sbjct: 768  gattatgacttcttttcacgattcttctgcccaaaatttgggatagatgaggatcctgtg 827

                                                                        
Query: 792  tgtggcagtgcacactgtgttttggcaccctattggggtggaaagctggggaaacaaaaa 851
            ||||| || ||||| |||||| ||||||| || |||||||||||||||||||||||||||
Sbjct: 828  tgtggaagcgcacattgtgttctggcaccttactggggtggaaagctggggaaacaaaaa 887

                                                                        
Query: 852  ctggtagcgtttcaggtatctccaaggagcgggacactatacctggagctggatgttgag 911
            ||    ||||||||||  || |||||||| || ||| | ||| |||||||||| |  |||
Sbjct: 888  cttacggcgtttcaggcttcgccaaggagtggaacattgtacttggagctggacggcgag 947

                                                                    
Query: 912  aatcggcgagtgcggattcagggcgaagctgttactgtcatggctgggacactctt 967
            ||  || |||| ||||| ||||| |||||||| ||||| ||||| ||||| |||||
Sbjct: 948  aacaggagagtccggatccagggagaagctgtcactgtgatggccgggactctctt 1003



 Score =  109 bits (55), Expect = 2e-20
 Identities = 102/117 (87%), Gaps = 3/117 (2%)
 Strand = Plus / Plus

                                                                       
Query: 273 gccgacgccgccacgccgcggttccacctccgctggttcacccccgtcacggaggtcgcg 332
           ||||||||||||   |||||||||| |||||||||||||||||||||| | |||||    
Sbjct: 285 gccgacgccgcc---ccgcggttccgcctccgctggttcacccccgtcgccgaggtgaat 341

                                                                    
Query: 333 ctctgcgggcacgcgacgctggccaccgcccacttcctcttcacgtccgtcctcgcg 389
           |||||||| ||||||||||||||  |||||||||||||||||||  |||||||||||
Sbjct: 342 ctctgcggccacgcgacgctggcatccgcccacttcctcttcaccaccgtcctcgcg 398



 Score = 97.6 bits (49), Expect = 8e-17
 Identities = 124/149 (83%)
 Strand = Plus / Plus

                                                                       
Query: 93  atccagtatgtcgtggtggatgccttcacggcccagccgttcaagggcaacccggccgcg 152
           |||||||| | ||||||||| || ||| ||||| ||||||||||||||||||| ||||| 
Sbjct: 96  atccagtacgccgtggtggacgcgttcgcggccgagccgttcaagggcaaccccgccgcc 155

                                                                       
Query: 153 gtatgcttcctggtggacgacgcggccgcccccgcgggggacggacggtggatgcagtcc 212
           |||||| ||||||  |  || |  |||||  | |||| |||||  |||||||||||||||
Sbjct: 156 gtatgcctcctggaaggggaggatgccgcggcggcggcggacgagcggtggatgcagtcc 215

                                        
Query: 213 gtcgccgtcgagttcaacctctcccagac 241
           ||||| | |||||||||||||||| ||||
Sbjct: 216 gtcgcagccgagttcaacctctccgagac 244



 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                               
Query: 403 tggtcgagttcgccaccaagtccggcgtcctgaccgccaagaaggttcctgc 454
           ||||||||||||  || | ||||||| |||||||||||||||||||||||||
Sbjct: 424 tggtcgagttcgtgacgaggtccggcatcctgaccgccaagaaggttcctgc 475



 Score = 58.0 bits (29), Expect = 7e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 475 aggagaagctgttcattgagctggacttccccatgat 511
           |||||||||||||||| |||||||| |||||||||||
Sbjct: 514 aggagaagctgttcatcgagctggatttccccatgat 550
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>dbj|AK101084.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024I08, full
            insert sequence
          Length = 1161

 Score =  174 bits (88), Expect = 4e-40
 Identities = 244/296 (82%)
 Strand = Plus / Plus

                                                                        
Query: 672  gaaattagaaagtgtgccggcagaggcgtgattgttacagcaccggcgcctgctggatcg 731
            ||||||| ||| ||||  || ||||| || |||||||| | ||| || ||||||||||| 
Sbjct: 710  gaaattaaaaaatgtgatggtagaggagttattgttacgggaccagcacctgctggatct 769

                                                                        
Query: 732  ggctatgacttcttcacacgttttttctgcccaaaatttgggattgatgaggatccggta 791
            |  |||||||||||  |||| || |||||||||||||||||||| ||||||||||| || 
Sbjct: 770  gattatgacttcttttcacgattcttctgcccaaaatttgggatagatgaggatcctgtg 829

                                                                        
Query: 792  tgtggcagtgcacactgtgttttggcaccctattggggtggaaagctggggaaacaaaaa 851
            ||||| || ||||| |||||| ||||||| || |||||||||||||||||||||||||||
Sbjct: 830  tgtggaagcgcacattgtgttctggcaccttactggggtggaaagctggggaaacaaaaa 889

                                                                        
Query: 852  ctggtagcgtttcaggtatctccaaggagcgggacactatacctggagctggatgttgag 911
            ||    ||||||||||  || |||||||| || ||| | ||| |||||||||| |  |||
Sbjct: 890  cttacggcgtttcaggcttcgccaaggagtggaacattgtacttggagctggacggcgag 949

                                                                    
Query: 912  aatcggcgagtgcggattcagggcgaagctgttactgtcatggctgggacactctt 967
            ||  || |||| ||||| ||||| |||||||| ||||| ||||| ||||| |||||
Sbjct: 950  aacaggagagtccggatccagggagaagctgtcactgtgatggccgggactctctt 1005



 Score =  109 bits (55), Expect = 2e-20
 Identities = 102/117 (87%), Gaps = 3/117 (2%)
 Strand = Plus / Plus

                                                                       
Query: 273 gccgacgccgccacgccgcggttccacctccgctggttcacccccgtcacggaggtcgcg 332
           ||||||||||||   |||||||||| |||||||||||||||||||||| | |||||    
Sbjct: 287 gccgacgccgcc---ccgcggttccgcctccgctggttcacccccgtcgccgaggtgaat 343

                                                                    
Query: 333 ctctgcgggcacgcgacgctggccaccgcccacttcctcttcacgtccgtcctcgcg 389
           |||||||| ||||||||||||||  |||||||||||||||||||  |||||||||||
Sbjct: 344 ctctgcggccacgcgacgctggcatccgcccacttcctcttcaccaccgtcctcgcg 400



 Score = 97.6 bits (49), Expect = 8e-17
 Identities = 124/149 (83%)
 Strand = Plus / Plus

                                                                       
Query: 93  atccagtatgtcgtggtggatgccttcacggcccagccgttcaagggcaacccggccgcg 152
           |||||||| | ||||||||| || ||| ||||| ||||||||||||||||||| ||||| 
Sbjct: 98  atccagtacgccgtggtggacgcgttcgcggccgagccgttcaagggcaaccccgccgcc 157

                                                                       
Query: 153 gtatgcttcctggtggacgacgcggccgcccccgcgggggacggacggtggatgcagtcc 212
           |||||| ||||||  |  || |  |||||  | |||| |||||  |||||||||||||||
Sbjct: 158 gtatgcctcctggaaggggaggatgccgcggcggcggcggacgagcggtggatgcagtcc 217

                                        
Query: 213 gtcgccgtcgagttcaacctctcccagac 241
           ||||| | |||||||||||||||| ||||
Sbjct: 218 gtcgcagccgagttcaacctctccgagac 246



 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                               
Query: 403 tggtcgagttcgccaccaagtccggcgtcctgaccgccaagaaggttcctgc 454
           ||||||||||||  || | ||||||| |||||||||||||||||||||||||
Sbjct: 426 tggtcgagttcgtgacgaggtccggcatcctgaccgccaagaaggttcctgc 477



 Score = 50.1 bits (25), Expect = 0.017
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 475 aggagaagctgttcattgagctggacttccccatgat 511
           |||||||| ||||||| |||||||| |||||||||||
Sbjct: 516 aggagaagttgttcatcgagctggatttccccatgat 552
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>gb|AY112642.1| Zea mays CL17031_1 mRNA sequence
          Length = 414

 Score = 95.6 bits (48), Expect = 3e-16
 Identities = 93/108 (86%)
 Strand = Plus / Plus

                                                                       
Query: 792 tgtggcagtgcacactgtgttttggcaccctattggggtggaaagctggggaaacaaaaa 851
           |||||||||||||| |||||||| ||||| || |||||||| |||||||||||||| |||
Sbjct: 57  tgtggcagtgcacattgtgttttagcaccttactggggtgggaagctggggaaacacaaa 116

                                                           
Query: 852 ctggtagcgtttcaggtatctccaaggagcgggacactatacctggag 899
           ||| |||||||||| | ||| ||  |||| || | |||||||||||||
Sbjct: 117 ctgatagcgtttcaagcatcccctcggagtggaatactatacctggag 164
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score = 85.7 bits (43), Expect = 3e-13
 Identities = 112/135 (82%)
 Strand = Plus / Minus

                                                                           
Query: 107     ggtggatgccttcacggcccagccgttcaagggcaacccggccgcggtatgcttcctggt 166
               |||||| || ||| ||||| ||||||||||||||||||| ||||| |||||| |||||| 
Sbjct: 9116217 ggtggacgcgttcgcggccgagccgttcaagggcaaccccgccgccgtatgcctcctgga 9116158

                                                                           
Query: 167     ggacgacgcggccgcccccgcgggggacggacggtggatgcagtccgtcgccgtcgagtt 226
                |  || |  |||||  | |||| |||||  |||||||||||||||||||| | ||||||
Sbjct: 9116157 aggggaggatgccgcggcggcggcggacgagcggtggatgcagtccgtcgcagccgagtt 9116098

                              
Query: 227     caacctctcccagac 241
               |||||||||| ||||
Sbjct: 9116097 caacctctccgagac 9116083



 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                           
Query: 781     aggatccggtatgtggcagtgcacactgtgttttggcaccctattggggtggaaagctgg 840
               ||||||| || ||||| || ||||| |||||| ||||||| || ||||||||||||||||
Sbjct: 9114037 aggatcctgtgtgtggaagcgcacattgtgttctggcaccttactggggtggaaagctgg 9113978

                                             
Query: 841     ggaaacaaaaactggtagcgtttcaggtat 870
               |||||||||||||    |||||||||||||
Sbjct: 9113977 ggaaacaaaaacttacggcgtttcaggtat 9113948



 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                        
Query: 333     ctctgcgggcacgcgacgctggccaccgcccacttcctcttcacgtccgtcctcgcg 389
               |||||||| ||||||||||||||  |||||||||||||||||||  |||||||||||
Sbjct: 9115898 ctctgcggccacgcgacgctggcatccgcccacttcctcttcaccaccgtcctcgcg 9115842



 Score = 71.9 bits (36), Expect = 5e-09
 Identities = 93/112 (83%)
 Strand = Plus / Minus

                                                                           
Query: 672     gaaattagaaagtgtgccggcagaggcgtgattgttacagcaccggcgcctgctggatcg 731
               ||||||| ||| ||||  || ||||| || |||||||| | ||| || ||||||||||| 
Sbjct: 9114941 gaaattaaaaaatgtgatggtagaggagttattgttacgggaccagcacctgctggatct 9114882

                                                                   
Query: 732     ggctatgacttcttcacacgttttttctgcccaaaatttgggattgatgagg 783
               |  |||||||||||  |||| || |||||||||||||||||||| |||||||
Sbjct: 9114881 gattatgacttcttttcacgattcttctgcccaaaatttgggatagatgagg 9114830



 Score = 65.9 bits (33), Expect = 3e-07
 Identities = 53/59 (89%), Gaps = 3/59 (5%)
 Strand = Plus / Minus

                                                                          
Query: 273     gccgacgccgccacgccgcggttccacctccgctggttcacccccgtcacggaggtcgc 331
               ||||||||||||   |||||||||| |||||||||||||||||||||| | ||||||||
Sbjct: 9116042 gccgacgccgcc---ccgcggttccgcctccgctggttcacccccgtcgccgaggtcgc 9115987



 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                   
Query: 403     tggtcgagttcgccaccaagtccggcgtcctgaccgccaagaaggttcctgc 454
               ||||||||||||  || | ||||||| |||||||||||||||||||||||||
Sbjct: 9115816 tggtcgagttcgtgacgaggtccggcatcctgaccgccaagaaggttcctgc 9115765



 Score = 58.0 bits (29), Expect = 7e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                    
Query: 475     aggagaagctgttcattgagctggacttccccatgat 511
               |||||||||||||||| |||||||| |||||||||||
Sbjct: 9115726 aggagaagctgttcatcgagctggatttccccatgat 9115690



 Score = 42.1 bits (21), Expect = 4.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 268      gcgcggccgacgccgccacgccgcg 292
                |||||| ||||||||||||||||||
Sbjct: 37295056 gcgcgggcgacgccgccacgccgcg 37295080
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>dbj|AP001080.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0499C11
          Length = 151369

 Score = 85.7 bits (43), Expect = 3e-13
 Identities = 112/135 (82%)
 Strand = Plus / Minus

                                                                          
Query: 107    ggtggatgccttcacggcccagccgttcaagggcaacccggccgcggtatgcttcctggt 166
              |||||| || ||| ||||| ||||||||||||||||||| ||||| |||||| |||||| 
Sbjct: 145224 ggtggacgcgttcgcggccgagccgttcaagggcaaccccgccgccgtatgcctcctgga 145165

                                                                          
Query: 167    ggacgacgcggccgcccccgcgggggacggacggtggatgcagtccgtcgccgtcgagtt 226
               |  || |  |||||  | |||| |||||  |||||||||||||||||||| | ||||||
Sbjct: 145164 aggggaggatgccgcggcggcggcggacgagcggtggatgcagtccgtcgcagccgagtt 145105

                             
Query: 227    caacctctcccagac 241
              |||||||||| ||||
Sbjct: 145104 caacctctccgagac 145090



 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                          
Query: 781    aggatccggtatgtggcagtgcacactgtgttttggcaccctattggggtggaaagctgg 840
              ||||||| || ||||| || ||||| |||||| ||||||| || ||||||||||||||||
Sbjct: 143044 aggatcctgtgtgtggaagcgcacattgtgttctggcaccttactggggtggaaagctgg 142985

                                            
Query: 841    ggaaacaaaaactggtagcgtttcaggtat 870
              |||||||||||||    |||||||||||||
Sbjct: 142984 ggaaacaaaaacttacggcgtttcaggtat 142955



 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                       
Query: 333    ctctgcgggcacgcgacgctggccaccgcccacttcctcttcacgtccgtcctcgcg 389
              |||||||| ||||||||||||||  |||||||||||||||||||  |||||||||||
Sbjct: 144905 ctctgcggccacgcgacgctggcatccgcccacttcctcttcaccaccgtcctcgcg 144849



 Score = 71.9 bits (36), Expect = 5e-09
 Identities = 93/112 (83%)
 Strand = Plus / Minus

                                                                          
Query: 672    gaaattagaaagtgtgccggcagaggcgtgattgttacagcaccggcgcctgctggatcg 731
              ||||||| ||| ||||  || ||||| || |||||||| | ||| || ||||||||||| 
Sbjct: 143948 gaaattaaaaaatgtgatggtagaggagttattgttacgggaccagcacctgctggatct 143889

                                                                  
Query: 732    ggctatgacttcttcacacgttttttctgcccaaaatttgggattgatgagg 783
              |  |||||||||||  |||| || |||||||||||||||||||| |||||||
Sbjct: 143888 gattatgacttcttttcacgattcttctgcccaaaatttgggatagatgagg 143837



 Score = 65.9 bits (33), Expect = 3e-07
 Identities = 53/59 (89%), Gaps = 3/59 (5%)
 Strand = Plus / Minus

                                                                         
Query: 273    gccgacgccgccacgccgcggttccacctccgctggttcacccccgtcacggaggtcgc 331
              ||||||||||||   |||||||||| |||||||||||||||||||||| | ||||||||
Sbjct: 145049 gccgacgccgcc---ccgcggttccgcctccgctggttcacccccgtcgccgaggtcgc 144994



 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                  
Query: 403    tggtcgagttcgccaccaagtccggcgtcctgaccgccaagaaggttcctgc 454
              ||||||||||||  || | ||||||| |||||||||||||||||||||||||
Sbjct: 144823 tggtcgagttcgtgacgaggtccggcatcctgaccgccaagaaggttcctgc 144772



 Score = 58.0 bits (29), Expect = 7e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                   
Query: 475    aggagaagctgttcattgagctggacttccccatgat 511
              |||||||||||||||| |||||||| |||||||||||
Sbjct: 144733 aggagaagctgttcatcgagctggatttccccatgat 144697
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>dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0011D01
          Length = 168655

 Score = 85.7 bits (43), Expect = 3e-13
 Identities = 112/135 (82%)
 Strand = Plus / Minus

                                                                         
Query: 107   ggtggatgccttcacggcccagccgttcaagggcaacccggccgcggtatgcttcctggt 166
             |||||| || ||| ||||| ||||||||||||||||||| ||||| |||||| |||||| 
Sbjct: 16599 ggtggacgcgttcgcggccgagccgttcaagggcaaccccgccgccgtatgcctcctgga 16540

                                                                         
Query: 167   ggacgacgcggccgcccccgcgggggacggacggtggatgcagtccgtcgccgtcgagtt 226
              |  || |  |||||  | |||| |||||  |||||||||||||||||||| | ||||||
Sbjct: 16539 aggggaggatgccgcggcggcggcggacgagcggtggatgcagtccgtcgcagccgagtt 16480

                            
Query: 227   caacctctcccagac 241
             |||||||||| ||||
Sbjct: 16479 caacctctccgagac 16465



 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                         
Query: 781   aggatccggtatgtggcagtgcacactgtgttttggcaccctattggggtggaaagctgg 840
             ||||||| || ||||| || ||||| |||||| ||||||| || ||||||||||||||||
Sbjct: 14419 aggatcctgtgtgtggaagcgcacattgtgttctggcaccttactggggtggaaagctgg 14360

                                           
Query: 841   ggaaacaaaaactggtagcgtttcaggtat 870
             |||||||||||||    |||||||||||||
Sbjct: 14359 ggaaacaaaaacttacggcgtttcaggtat 14330



 Score = 73.8 bits (37), Expect = 1e-09
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                      
Query: 333   ctctgcgggcacgcgacgctggccaccgcccacttcctcttcacgtccgtcctcgcg 389
             |||||||| ||||||||||||||  |||||||||||||||||||  |||||||||||
Sbjct: 16280 ctctgcggccacgcgacgctggcatccgcccacttcctcttcaccaccgtcctcgcg 16224



 Score = 71.9 bits (36), Expect = 5e-09
 Identities = 93/112 (83%)
 Strand = Plus / Minus

                                                                         
Query: 672   gaaattagaaagtgtgccggcagaggcgtgattgttacagcaccggcgcctgctggatcg 731
             ||||||| ||| ||||  || ||||| || |||||||| | ||| || ||||||||||| 
Sbjct: 15323 gaaattaaaaaatgtgatggtagaggagttattgttacgggaccagcacctgctggatct 15264

                                                                 
Query: 732   ggctatgacttcttcacacgttttttctgcccaaaatttgggattgatgagg 783
             |  |||||||||||  |||| || |||||||||||||||||||| |||||||
Sbjct: 15263 gattatgacttcttttcacgattcttctgcccaaaatttgggatagatgagg 15212



 Score = 65.9 bits (33), Expect = 3e-07
 Identities = 53/59 (89%), Gaps = 3/59 (5%)
 Strand = Plus / Minus

                                                                        
Query: 273   gccgacgccgccacgccgcggttccacctccgctggttcacccccgtcacggaggtcgc 331
             ||||||||||||   |||||||||| |||||||||||||||||||||| | ||||||||
Sbjct: 16424 gccgacgccgcc---ccgcggttccgcctccgctggttcacccccgtcgccgaggtcgc 16369



 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                 
Query: 403   tggtcgagttcgccaccaagtccggcgtcctgaccgccaagaaggttcctgc 454
             ||||||||||||  || | ||||||| |||||||||||||||||||||||||
Sbjct: 16198 tggtcgagttcgtgacgaggtccggcatcctgaccgccaagaaggttcctgc 16147



 Score = 58.0 bits (29), Expect = 7e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                  
Query: 475   aggagaagctgttcattgagctggacttccccatgat 511
             |||||||||||||||| |||||||| |||||||||||
Sbjct: 16108 aggagaagctgttcatcgagctggatttccccatgat 16072
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>gb|AC118289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0099O15, complete sequence
          Length = 137357

 Score = 71.9 bits (36), Expect = 5e-09
 Identities = 48/52 (92%)
 Strand = Plus / Plus

                                                                 
Query: 403   tggtcgagttcgccaccaagtccggcgtcctgaccgccaagaaggttcctgc 454
             ||||||||||||  |||| ||||||| |||||||||||||||||||||||||
Sbjct: 43980 tggtcgagttcgtgaccaggtccggcatcctgaccgccaagaaggttcctgc 44031



 Score = 65.9 bits (33), Expect = 3e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                  
Query: 333   ctctgcgggcacgcgacgctggccaccgcccacttcctcttcacgtccgtcct 385
             |||||||| ||||||||||||||  |||||||||||||||||||  |||||||
Sbjct: 43904 ctctgcggccacgcgacgctggcatccgcccacttcctcttcaccaccgtcct 43956
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score = 71.9 bits (36), Expect = 5e-09
 Identities = 48/52 (92%)
 Strand = Plus / Plus

                                                                    
Query: 403      tggtcgagttcgccaccaagtccggcgtcctgaccgccaagaaggttcctgc 454
                ||||||||||||  |||| ||||||| |||||||||||||||||||||||||
Sbjct: 23653975 tggtcgagttcgtgaccaggtccggcatcctgaccgccaagaaggttcctgc 23654026



 Score = 65.9 bits (33), Expect = 3e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                     
Query: 333      ctctgcgggcacgcgacgctggccaccgcccacttcctcttcacgtccgtcct 385
                |||||||| ||||||||||||||  |||||||||||||||||||  |||||||
Sbjct: 23653899 ctctgcggccacgcgacgctggcatccgcccacttcctcttcaccaccgtcct 23653951
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 61.9 bits (31), Expect = 5e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                          
Query: 303     cgctggttcacccccgtcacggaggtcgcgctctgcgggcacgcgacgctggccaccgc 361
               ||||||||||| |||| ||| ||||||||| | ||||| |||||||| |||||||||||
Sbjct: 8354997 cgctggttcacgcccgccaccgaggtcgcgatgtgcggtcacgcgaccctggccaccgc 8354939
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>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29
          Length = 339650

 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                          
Query: 303    cgctggttcacccccgtcacggaggtcgcgctctgcgggcacgcgacgctggccaccgcc 362
              ||||||||||| || | ||| ||||||||| | ||||| ||||| ||||| |||||||||
Sbjct: 245733 cgctggttcactccggccaccgaggtcgcgatgtgcggccacgccacgctcgccaccgcc 245792

                      
Query: 363    cacttcct 370
              ||| ||||
Sbjct: 245793 cacgtcct 245800
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>ref|NM_001056968.1| Oryza sativa (japonica cultivar-group) Os03g0434400 (Os03g0434400)
           mRNA, complete cds
          Length = 984

 Score = 48.1 bits (24), Expect = 0.069
 Identities = 77/92 (83%), Gaps = 2/92 (2%)
 Strand = Plus / Plus

                                                                       
Query: 720 cctgctggatcgggctatgacttcttcacacgttttttctgcccaaaatttgggattg-a 778
           |||| ||||||  ||||||| || ||||  ||||| ||||||||||||| | |||||| |
Sbjct: 730 cctgttggatctagctatgattttttcagtcgtttcttctgcccaaaatat-ggattgaa 788

                                           
Query: 779 tgaggatccggtatgtggcagtgcacactgtg 810
           ||||||||| |||||||| ||||  |||||||
Sbjct: 789 tgaggatcctgtatgtggtagtgtgcactgtg 820



 Score = 42.1 bits (21), Expect = 4.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 936 gaagctgttactgtcatggctggga 960
           ||||||||||||||||||| |||||
Sbjct: 946 gaagctgttactgtcatggttggga 970
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>gb|AC146865.11| Medicago truncatula clone mth2-36m14, complete sequence
          Length = 128493

 Score = 46.1 bits (23), Expect = 0.27
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 781   aggatccggtatgtggcagtgcacactgtgttttggcaccctattgg 827
             ||||||| || ||||| |||||||| ||||  |||||||||||||||
Sbjct: 58682 aggatcctgtttgtgggagtgcacattgtggcttggcaccctattgg 58636
to top
>emb|BX017720.1|CNS08LU4 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA26DC01 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 617

 Score = 46.1 bits (23), Expect = 0.27
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 467 ggaggagcaggagaagctgttca 489
           |||||||||||||||||||||||
Sbjct: 563 ggaggagcaggagaagctgttca 541
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>emb|BX017719.1|CNS08LU3 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA26DC01 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 838

 Score = 46.1 bits (23), Expect = 0.27
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 467 ggaggagcaggagaagctgttca 489
           |||||||||||||||||||||||
Sbjct: 764 ggaggagcaggagaagctgttca 786
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>emb|BX017195.1|CNS08LFJ Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA25DE01 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 740

 Score = 46.1 bits (23), Expect = 0.27
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 467 ggaggagcaggagaagctgttca 489
           |||||||||||||||||||||||
Sbjct: 548 ggaggagcaggagaagctgttca 526
to top
>emb|BX017194.1|CNS08LFI Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA25DE01 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 977

 Score = 46.1 bits (23), Expect = 0.27
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 467 ggaggagcaggagaagctgttca 489
           |||||||||||||||||||||||
Sbjct: 856 ggaggagcaggagaagctgttca 878
to top
>emb|BX007670.1|CNS08E2Y Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA12DB05 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 417

 Score = 46.1 bits (23), Expect = 0.27
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 467 ggaggagcaggagaagctgttca 489
           |||||||||||||||||||||||
Sbjct: 207 ggaggagcaggagaagctgttca 185
to top
>emb|BX007669.1|CNS08E2X Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA12DB05 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 925

 Score = 46.1 bits (23), Expect = 0.27
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 467 ggaggagcaggagaagctgttca 489
           |||||||||||||||||||||||
Sbjct: 755 ggaggagcaggagaagctgttca 777
to top
>emb|BX005577.1|CNS08CGT Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA1AE04 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 286

 Score = 46.1 bits (23), Expect = 0.27
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 467 ggaggagcaggagaagctgttca 489
           |||||||||||||||||||||||
Sbjct: 212 ggaggagcaggagaagctgttca 190
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>emb|BX005576.1|CNS08CGS Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA1AE04 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 972

 Score = 46.1 bits (23), Expect = 0.27
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 467 ggaggagcaggagaagctgttca 489
           |||||||||||||||||||||||
Sbjct: 846 ggaggagcaggagaagctgttca 868
to top
>ref|XM_563945.1| Anopheles gambiae str. PEST ENSANGP00000025662
           (ENSANGG00000024792), partial mRNA
          Length = 718

 Score = 46.1 bits (23), Expect = 0.27
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 467 ggaggagcaggagaagctgttca 489
           |||||||||||||||||||||||
Sbjct: 526 ggaggagcaggagaagctgttca 504
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>ref|XM_309717.2| Anopheles gambiae str. PEST ENSANGP00000012703
           (ENSANGG00000010214), partial mRNA
          Length = 1218

 Score = 46.1 bits (23), Expect = 0.27
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 467 ggaggagcaggagaagctgttca 489
           |||||||||||||||||||||||
Sbjct: 717 ggaggagcaggagaagctgttca 739
to top
>ref|XM_001216508.1| Aspergillus terreus NIH2624 hypothetical protein (ATEG_07887) mRNA,
           complete cds
          Length = 2334

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 930 cagggcgaagctgttactgtca 951
           ||||||||||||||||||||||
Sbjct: 430 cagggcgaagctgttactgtca 451
to top
>ref|XM_518815.2| PREDICTED: Pan troglodytes nesprin 1, transcript variant 3 (SYNE1),
             mRNA
          Length = 27353

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 464   tgaggaggagcaggagaagctg 485
             ||||||||||||||||||||||
Sbjct: 26484 tgaggaggagcaggagaagctg 26463
to top
>ref|XM_001138443.1| PREDICTED: Pan troglodytes nesprin 1, transcript variant 1 (SYNE1),
             mRNA
          Length = 27624

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 464   tgaggaggagcaggagaagctg 485
             ||||||||||||||||||||||
Sbjct: 26755 tgaggaggagcaggagaagctg 26734
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>ref|XM_001139525.1| PREDICTED: Pan troglodytes nesprin 1, transcript variant 2 (SYNE1),
             mRNA
          Length = 27155

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 464   tgaggaggagcaggagaagctg 485
             ||||||||||||||||||||||
Sbjct: 26286 tgaggaggagcaggagaagctg 26265
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>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence
          Length = 23011544

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 486      ttcattgagctggacttcccca 507
                ||||||||||||||||||||||
Sbjct: 15764876 ttcattgagctggacttcccca 15764897
to top
>tpg|BK000543.1| TPA_exp: Homo sapiens spectrin-like protein of the nuclear envelope and
             Golgi (SYNE1) mRNA, complete cds
          Length = 26089

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 464   tgaggaggagcaggagaagctg 485
             ||||||||||||||||||||||
Sbjct: 25314 tgaggaggagcaggagaagctg 25293
to top
>gb|AC115484.2| Drosophila melanogaster clone BACR06K01, complete sequence
          Length = 168504

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 486   ttcattgagctggacttcccca 507
             ||||||||||||||||||||||
Sbjct: 11885 ttcattgagctggacttcccca 11906
to top
>ref|NM_033071.1| Homo sapiens spectrin repeat containing, nuclear envelope 1 (SYNE1),
             transcript variant longer, mRNA
 gb|AF535142.1| Homo sapiens enaptin mRNA, complete cds
          Length = 27435

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 464   tgaggaggagcaggagaagctg 485
             ||||||||||||||||||||||
Sbjct: 26568 tgaggaggagcaggagaagctg 26547
to top
>gb|AC129591.4| Mus musculus BAC clone RP24-510A3 from chromosome 14, complete sequence
          Length = 176214

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 942    gttactgtcatggctgggacac 963
              ||||||||||||||||||||||
Sbjct: 152191 gttactgtcatggctgggacac 152170
to top
>ref|NM_182961.1| Homo sapiens spectrin repeat containing, nuclear envelope 1 (SYNE1),
             transcript variant longest, mRNA
 gb|AF495910.1| Homo sapiens nesprin-1 mRNA, complete cds
          Length = 27652

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 464   tgaggaggagcaggagaagctg 485
             ||||||||||||||||||||||
Sbjct: 26877 tgaggaggagcaggagaagctg 26856
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>ref|NM_135922.2| Drosophila melanogaster CG3793-RA (CG3793), mRNA
          Length = 1577

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 486 ttcattgagctggacttcccca 507
           ||||||||||||||||||||||
Sbjct: 486 ttcattgagctggacttcccca 507
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>dbj|AK127076.1| Homo sapiens cDNA FLJ45133 fis, clone BRAWH3038055, weakly  similar
            to Homo sapiens spectrin repeat containing, nuclear
            envelope 2 (SYNE2)
          Length = 5698

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 464  tgaggaggagcaggagaagctg 485
            ||||||||||||||||||||||
Sbjct: 4923 tgaggaggagcaggagaagctg 4902
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>dbj|AK122691.1| Homo sapiens cDNA FLJ16153 fis, clone BRAMY3000210, highly  similar
            to Mus musculus Syne-1B mRNA
          Length = 4932

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 464  tgaggaggagcaggagaagctg 485
            ||||||||||||||||||||||
Sbjct: 4157 tgaggaggagcaggagaagctg 4136
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>gb|BC090927.1| Homo sapiens spectrin repeat containing, nuclear envelope 1, mRNA
            (cDNA clone IMAGE:3077391), partial cds
          Length = 3967

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 464  tgaggaggagcaggagaagctg 485
            ||||||||||||||||||||||
Sbjct: 3080 tgaggaggagcaggagaagctg 3059
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>gb|AC150032.3| Rhinolophus ferrumequinum clone VMRC7-372J13, complete sequence
          Length = 168878

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 456   ccagagactgaggaggagcaggagaa 481
             |||||||||||||||||| |||||||
Sbjct: 39171 ccagagactgaggaggaggaggagaa 39146
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>gb|AF444779.1|AF444779 Homo sapiens myocyte inner nuclear membrane protein (MYNE1) mRNA,
            complete cds
          Length = 4162

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 464  tgaggaggagcaggagaagctg 485
            ||||||||||||||||||||||
Sbjct: 3387 tgaggaggagcaggagaagctg 3366
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>ref|NM_133650.1| Homo sapiens spectrin repeat containing, nuclear envelope 1 (SYNE1),
            transcript variant alpha, mRNA
 gb|AY061756.1| Homo sapiens nesprin-1 alpha mRNA, complete cds
          Length = 3801

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 464  tgaggaggagcaggagaagctg 485
            ||||||||||||||||||||||
Sbjct: 3026 tgaggaggagcaggagaagctg 3005
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>ref|NM_015293.1| Homo sapiens spectrin repeat containing, nuclear envelope 1 (SYNE1),
            transcript variant beta, mRNA
 gb|AY061755.1| Homo sapiens nesprin-1 beta mRNA, complete cds
          Length = 10742

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 464  tgaggaggagcaggagaagctg 485
            ||||||||||||||||||||||
Sbjct: 9967 tgaggaggagcaggagaagctg 9946
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>emb|AL078582.13|HSDJ130E4 Human DNA sequence from clone RP1-130E4 on chromosome 6q24.2-25.3
             Contains the 3' end of the ESR1 gene for estrogen receptor
             1, the 3' end of the synaptic nuclei expressed gene 1b
             (SYNE-1) (nesprin-1 beta, MYNE1, SYNE1, KIAA0796),
             complete sequence
          Length = 108893

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 464   tgaggaggagcaggagaagctg 485
             ||||||||||||||||||||||
Sbjct: 73616 tgaggaggagcaggagaagctg 73637
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>gb|AY051573.1| Drosophila melanogaster GH21948 full length cDNA
          Length = 1588

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 486 ttcattgagctggacttcccca 507
           ||||||||||||||||||||||
Sbjct: 478 ttcattgagctggacttcccca 499
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>gb|AY184206.1| Homo sapiens nesprin-1 beta 2 mRNA, complete cds
          Length = 10637

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 464  tgaggaggagcaggagaagctg 485
            ||||||||||||||||||||||
Sbjct: 9862 tgaggaggagcaggagaagctg 9841
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>gb|AY184203.1| Homo sapiens nesprin-1 alpha 2 mRNA, complete cds
          Length = 3666

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 464  tgaggaggagcaggagaagctg 485
            ||||||||||||||||||||||
Sbjct: 2891 tgaggaggagcaggagaagctg 2870
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>emb|BX647837.1|HSM807983 Homo sapiens mRNA; cDNA DKFZp451B1511 (from clone DKFZp451B1511)
          Length = 5852

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 464  tgaggaggagcaggagaagctg 485
            ||||||||||||||||||||||
Sbjct: 5059 tgaggaggagcaggagaagctg 5038
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>emb|BX537837.1|HSM805932 Homo sapiens mRNA; cDNA DKFZp686K0193 (from clone DKFZp686K0193)
          Length = 5339

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 464  tgaggaggagcaggagaagctg 485
            ||||||||||||||||||||||
Sbjct: 4455 tgaggaggagcaggagaagctg 4434
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>emb|AL833542.1|HSM804855 Homo sapiens mRNA; cDNA DKFZp686G133 (from clone DKFZp686G133)
          Length = 7815

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 464  tgaggaggagcaggagaagctg 485
            ||||||||||||||||||||||
Sbjct: 6918 tgaggaggagcaggagaagctg 6897
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>gb|AC146617.3| Mus musculus BAC clone RP23-14M15 from 14, complete sequence
          Length = 221015

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 942    gttactgtcatggctgggacac 963
              ||||||||||||||||||||||
Sbjct: 211992 gttactgtcatggctgggacac 212013
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>gb|AF043290.1|AF043290 Homo sapiens lymphocyte membrane associated protein (8B7) mRNA,
            complete cds
          Length = 1846

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 464  tgaggaggagcaggagaagctg 485
            ||||||||||||||||||||||
Sbjct: 1060 tgaggaggagcaggagaagctg 1039
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>emb|AL833657.1|HSM804970 Homo sapiens mRNA; cDNA DKFZp667A1721 (from clone DKFZp667A1721)
          Length = 2517

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 464  tgaggaggagcaggagaagctg 485
            ||||||||||||||||||||||
Sbjct: 1630 tgaggaggagcaggagaagctg 1609
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>dbj|AB018339.2| Homo sapiens mRNA for KIAA0796 protein, partial cds
          Length = 6289

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 464  tgaggaggagcaggagaagctg 485
            ||||||||||||||||||||||
Sbjct: 5514 tgaggaggagcaggagaagctg 5493
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>ref|XM_001223270.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_04057)
           mRNA, complete cds
          Length = 1272

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 346 cgacgctggccaccgcccact 366
           |||||||||||||||||||||
Sbjct: 662 cgacgctggccaccgcccact 682
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>gb|CP000413.1| Lactobacillus gasseri ATCC 33323, complete genome
          Length = 1894360

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 747     acacgttttttctgcccaaaa 767
               |||||||||||||||||||||
Sbjct: 1492636 acacgttttttctgcccaaaa 1492616
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>ref|XM_001141596.1| PREDICTED: Pan troglodytes hypothetical protein LOC739910
           (LOC739910), mRNA
          Length = 1500

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 265 cccgcgcggccgacgccgcca 285
           |||||||||||||||||||||
Sbjct: 944 cccgcgcggccgacgccgcca 964
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>ref|XM_001093254.1| PREDICTED: Macaca mulatta similar to oligodendrocyte lineage
           transcription factor 2, transcript variant 4
           (LOC700098), mRNA
          Length = 2572

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 158 cttcctggtggacgacgcggccgcc 182
           |||| ||||||||||||||||||||
Sbjct: 531 cttcttggtggacgacgcggccgcc 507
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>ref|XM_001093033.1| PREDICTED: Macaca mulatta similar to oligodendrocyte lineage
            transcription factor 2, transcript variant 2 (LOC700098),
            mRNA
          Length = 3271

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 158  cttcctggtggacgacgcggccgcc 182
            |||| ||||||||||||||||||||
Sbjct: 1230 cttcttggtggacgacgcggccgcc 1206
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>ref|XM_001092917.1| PREDICTED: Macaca mulatta similar to oligodendrocyte lineage
           transcription factor 2, transcript variant 1
           (LOC700098), mRNA
          Length = 1690

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 158 cttcctggtggacgacgcggccgcc 182
           |||| ||||||||||||||||||||
Sbjct: 675 cttcttggtggacgacgcggccgcc 651
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>ref|XM_001093146.1| PREDICTED: Macaca mulatta similar to oligodendrocyte lineage
           transcription factor 2, transcript variant 3
           (LOC700098), mRNA
          Length = 819

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 158 cttcctggtggacgacgcggccgcc 182
           |||| ||||||||||||||||||||
Sbjct: 531 cttcttggtggacgacgcggccgcc 507
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>gb|BT017614.1| Zea mays clone EL01N0433D01.c mRNA sequence
          Length = 1229

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 405 gtcgagttcgccaccaagtcc 425
           |||||||||||||||||||||
Sbjct: 381 gtcgagttcgccaccaagtcc 401
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>gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genomic sequence, complete
             sequence
          Length = 132981

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 936   gaagctgttactgtcatggctggga 960
             ||||||||||||||||||| |||||
Sbjct: 39573 gaagctgttactgtcatggttggga 39597
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>ref|XM_588802.2| PREDICTED: Bos taurus similar to oligodendrocyte lineage
           transcription factor 2 (LOC539695), mRNA
          Length = 1077

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 158 cttcctggtggacgacgcggccgcc 182
           |||| ||||||||||||||||||||
Sbjct: 297 cttcttggtggacgacgcggccgcc 273
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>gb|AC133098.7| Mus musculus BAC clone RP23-336L12 from chromosome 6, complete sequence
          Length = 182955

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 861    tttcaggtatctccaaggagc 881
              |||||||||||||||||||||
Sbjct: 119498 tttcaggtatctccaaggagc 119478
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 936      gaagctgttactgtcatggctggga 960
                ||||||||||||||||||| |||||
Sbjct: 18128509 gaagctgttactgtcatggttggga 18128533
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>emb|AL133325.20| Human DNA sequence from clone RP5-984P4 on chromosome 20 Contains the
              NKX2-2 gene for NK2 transcription factor related locus 2
              (Drosophila), a hydroxysteroid (17-beta) dehydrogenase 12
              (HSD17B12) pseudogene, the GSTM3P gene for glutathione
              S-transferase M3 pseudogene, a novel gene and two CpG
              islands, complete sequence
          Length = 160013

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 265    cccgcgcggccgacgccgcca 285
              |||||||||||||||||||||
Sbjct: 101607 cccgcgcggccgacgccgcca 101627
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>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence
          Length = 3288558

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 907     ttgagaatcggcgagtgcgga 927
               |||||||||||||||||||||
Sbjct: 3177196 ttgagaatcggcgagtgcgga 3177176
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>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16
          Length = 343473

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 341    gcacgcgacgctggccaccgc 361
              |||||||||||||||||||||
Sbjct: 332059 gcacgcgacgctggccaccgc 332079
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>emb|BX640422.1| Bordetella pertussis strain Tohama I, complete genome; segment 12/12
          Length = 257701

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 341    gcacgcgacgctggccaccgc 361
              |||||||||||||||||||||
Sbjct: 165237 gcacgcgacgctggccaccgc 165257
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>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29
          Length = 292200

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 344    cgcgacgctggccaccgcccacttc 368
              |||| ||||||||||||||||||||
Sbjct: 291166 cgcgtcgctggccaccgcccacttc 291142
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>dbj|AP003611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0423B08
          Length = 151490

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 268  gcgcggccgacgccgccacgccgcg 292
            |||||| ||||||||||||||||||
Sbjct: 7090 gcgcgggcgacgccgccacgccgcg 7114
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>dbj|AP003287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0679C12
          Length = 153666

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 268    gcgcggccgacgccgccacgccgcg 292
              |||||| ||||||||||||||||||
Sbjct: 132045 gcgcgggcgacgccgccacgccgcg 132069
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>gb|AF269579.1|AF269579 Staphylococcus epidermidis strain SR1 clone step.1011f12 genomic
            sequence
          Length = 3461

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1060 aatcgatgcaccagtttatgg 1080
            |||||||||||||||||||||
Sbjct: 179  aatcgatgcaccagtttatgg 199
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>gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome
          Length = 2616530

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1060   aatcgatgcaccagtttatgg 1080
              |||||||||||||||||||||
Sbjct: 850949 aatcgatgcaccagtttatgg 850969
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>gb|AF092365.1|AF092365 Cynolebias whitei tRNA-Ile gene, partial sequence; tRNA-Gln and
            tRNA-Met genes, complete sequence; NADH dehydrogenase
            subunit II gene, complete cds; tRNA-Trp, tRNA-Ala,
            tRNA-Asn, tRNA-Cys, and tRNA-Tyr genes, complete
            sequence; and cytochrome c oxidase subunit I gene,
            partial cds; mitochondrial genes for mitochondrial
            products
          Length = 1578

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1022 tagaaataaatatatttgctg 1042
            |||||||||||||||||||||
Sbjct: 245  tagaaataaatatatttgctg 265
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>gb|AY105457.1| Zea mays PCO149506 mRNA sequence
          Length = 1074

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 405 gtcgagttcgccaccaagtcc 425
           |||||||||||||||||||||
Sbjct: 295 gtcgagttcgccaccaagtcc 315
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>gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete genome
          Length = 2499279

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1060   aatcgatgcaccagtttatgg 1080
              |||||||||||||||||||||
Sbjct: 957357 aatcgatgcaccagtttatgg 957377
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                                
Query: 324     gaggtcgcgctctgcgggcacgcgacgctggccaccgcccacttcctct 372
               ||||| || |||||||| ||||||||||| |||| ||| ||| ||||||
Sbjct: 2962041 gaggtggccctctgcggacacgcgacgctcgccagcgcacacgtcctct 2962089
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>emb|AL845438.21| Zebrafish DNA sequence from clone CH211-120G21 in linkage group 10,
              complete sequence
          Length = 175059

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1011   agaagactttgtagaaataaa 1031
              |||||||||||||||||||||
Sbjct: 148472 agaagactttgtagaaataaa 148492
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>gb|L10720.1|BPETOXOP Bordetella pertussis toxin liberation operon
          Length = 9342

 Score = 42.1 bits (21), Expect = 4.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 341  gcacgcgacgctggccaccgc 361
            |||||||||||||||||||||
Sbjct: 2291 gcacgcgacgctggccaccgc 2311


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 178,556,938
Number of extensions: 9395771
Number of successful extensions: 215253
Number of sequences better than 10.0: 79
Number of HSP's gapped: 215251
Number of HSP's successfully gapped: 118
Length of query: 1117
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1094
Effective length of database: 18,503,978,556
Effective search space: 20243352540264
Effective search space used: 20243352540264
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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