ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf150f02 |
|---|---|
| Clone Library Name | barley_pub |
>Q55909:Y305_SYNY3 UPF0043 membrane protein slr0305 - Synechocystis sp. (strain PCC| 6803) Length = 209 Score = 51.6 bits (122), Expect = 8e-06 Identities = 42/140 (30%), Positives = 63/140 (45%), Gaps = 4/140 (2%) Frame = +2 Query: 578 VLIPSSPFMWIAGMTFGYGYGFLIITTAMSIGMSLPFCIGSAFHSRIHRWLEKWPKKAAF 757 V +P S AG+ FG G + + ++G + F +G W+ K Sbjct: 33 VFLPGSILTLGAGVVFGVILGSIYVFIGATLGATAAFLVGRYL---ARGWVAKKIAGNQK 89 Query: 758 VRLAGEGDWFHQFRAVALLRISP-FPYIVFNYASVATNVQYCPYIAGSMAGTIHETLLAI 934 + E + V L R+SP FP+ + NYA TNV Y+ GS+ G I T++ + Sbjct: 90 FKAIDEAVGKEGLKIVILTRLSPVFPFNLLNYAYGITNVSLKDYVIGSL-GMIPGTIMYV 148 Query: 935 YSGKLVQSLA---VATSQGS 985 Y G L SLA AT+Q + Sbjct: 149 YIGSLAGSLATLGTATNQAN 168
>Q3U145:TMM64_MOUSE Transmembrane protein 64 - Mus musculus (Mouse)| Length = 381 Score = 45.1 bits (105), Expect = 7e-04 Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 12/164 (7%) Frame = +2 Query: 554 GAIAFFPSVLIPSSPFMW---IAGMTFGYGYGFLIITTAMSIGMSLPFCIGSAFHSRI-H 721 G + F ++ S P W + + GY YGF++ M +G+ + I R+ Sbjct: 160 GVLLFVVGFIVVSFPCGWGYIVLNVAAGYLYGFVLGMGLMVVGVLIGTFIAHVVCKRLLT 219 Query: 722 RW----LEKWPKKAAFVRLAGEGDWFHQFRAVALLRISPFPYIVFNYASVATNVQYCPYI 889 W ++ K +A +R+ G + VAL R++P P+ + N T+V Y+ Sbjct: 220 AWVAARIQNSDKLSAVIRVVEGGSGL---KVVALARLTPIPFGLQNAVFSITDVPLPSYL 276 Query: 890 AGSMAGTIHETLLAIYSGKLVQS----LAVATSQGSFLSVDQII 1009 S AG + LL Y G +++ +A + G F+ QI+ Sbjct: 277 MASSAGLLPTQLLNSYLGTTLRTMEDVIAEQSLSGYFVFCLQIV 320
>Q6YI46:TMM64_HUMAN Transmembrane protein 64 - Homo sapiens (Human)| Length = 380 Score = 43.1 bits (100), Expect = 0.003 Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 12/164 (7%) Frame = +2 Query: 554 GAIAFFPSVLIPSSPFMW---IAGMTFGYGYGFLIITTAMSIGMSLPFCIGSAFHSRI-H 721 G + F ++ S P W + + GY YGF++ M +G+ + I R+ Sbjct: 159 GVLLFVVGFIVVSFPCGWGYIVLNVAAGYLYGFVLGMGLMMVGVLIGTFIAHVVCKRLLT 218 Query: 722 RW----LEKWPKKAAFVRLAGEGDWFHQFRAVALLRISPFPYIVFNYASVATNVQYCPYI 889 W ++ K +A +R+ G + VAL R++P P+ + N T++ Y+ Sbjct: 219 AWVAARIQSSEKLSAVIRVVEGGSGL---KVVALARLTPIPFGLQNAVFSITDLSLPNYL 275 Query: 890 AGSMAGTIHETLLAIYSGKLVQS----LAVATSQGSFLSVDQII 1009 S G + LL Y G +++ +A + G F+ QII Sbjct: 276 MASSVGLLPTQLLNSYLGTTLRTMEDVIAEQSVSGYFVFCLQII 319
>Q96HV5:TM41A_HUMAN Transmembrane protein 41A precursor - Homo sapiens (Human)| Length = 264 Score = 42.4 bits (98), Expect = 0.005 Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 2/160 (1%) Frame = +2 Query: 533 VILLICFGAIAFFPSVLIPSSPFMWI-AGMTFGYGYGFLIITTAMSIGMSLPFCIGSAFH 709 V LL C GA + IP S F+ + AG FG G L+ S+G + + + S F Sbjct: 69 VFLLFC-GAYLYKQGFAIPGSSFLNVLAGALFGPWLGLLLCCVLTSVGATCCYLLSSIFG 127 Query: 710 SRIHRWLEKWPKKAAFVRLAGEGDWFHQFRAVALLRISPF-PYIVFNYASVATNVQYCPY 886 ++ + +P K A ++ E + F + LR+ P P N ++ N+ + Sbjct: 128 KQL--VVSYFPDKVALLQRKVEENRNSLFFFLLFLRLFPMTPNWFLNLSAPILNIPIVQF 185 Query: 887 IAGSMAGTIHETLLAIYSGKLVQSLAVATSQGSFLSVDQI 1006 + G I + + +G ++ +L TS + S D + Sbjct: 186 FFSVLIGLIPYNFICVQTGSILSTL---TSLDALFSWDTV 222
>Q08D99:TM41A_BOVIN Transmembrane protein 41A precursor - Bos taurus (Bovine)| Length = 264 Score = 38.9 bits (89), Expect = 0.051 Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 2/145 (1%) Frame = +2 Query: 533 VILLICFGAIAFFPSVLIPSSPFMWI-AGMTFGYGYGFLIITTAMSIGMSLPFCIGSAFH 709 V LL C A + S IP S F+ + AG FG G L+ S+G + + + S F Sbjct: 69 VFLLFC-SAYLYKQSFAIPGSSFLNVLAGALFGPWLGLLLCCVLTSVGATGCYLLSSVFG 127 Query: 710 SRIHRWLEKWPKKAAFVRLAGEGDWFHQFRAVALLRISPF-PYIVFNYASVATNVQYCPY 886 ++ + +P K A ++ E + F + LR+ P P N ++ N+ + Sbjct: 128 KQLVVFY--FPDKVALLQKKVEENRNGLFFFLLFLRLFPMTPNWFLNLSAPILNIPIVQF 185 Query: 887 IAGSMAGTIHETLLAIYSGKLVQSL 961 + G I + + +G ++ +L Sbjct: 186 FFSVLIGLIPYNFICVQTGSILSTL 210
>Q9D8U2:TM41A_MOUSE Transmembrane protein 41A precursor - Mus musculus (Mouse)| Length = 264 Score = 38.5 bits (88), Expect = 0.067 Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 2/145 (1%) Frame = +2 Query: 533 VILLICFGAIAFFPSVLIPSSPFMWI-AGMTFGYGYGFLIITTAMSIGMSLPFCIGSAFH 709 V LL C A + IP S F+ + AG FG G L+ S+G + + + S F Sbjct: 69 VFLLFC-SAYLYKQGFAIPGSSFLNVLAGALFGPWLGLLLCCVLTSVGATGCYLLSSLFG 127 Query: 710 SRIHRWLEKWPKKAAFVRLAGEGDWFHQFRAVALLRISPF-PYIVFNYASVATNVQYCPY 886 ++ + +P K A ++ E + F + LR+ P P N ++ N+ + Sbjct: 128 KQL--VISYFPDKVALLQKKVEENRNSLFFFLLFLRLFPMTPNWFLNLSAPILNIPIVQF 185 Query: 887 IAGSMAGTIHETLLAIYSGKLVQSL 961 + G I + + +G ++ +L Sbjct: 186 FFSVLIGLIPYNFICVQTGSILSTL 210
>Q646B0:TA2R4_PANTR Taste receptor type 2 member 4 - Pan troglodytes (Chimpanzee)| Length = 299 Score = 38.5 bits (88), Expect = 0.067 Identities = 40/139 (28%), Positives = 59/139 (42%), Gaps = 12/139 (8%) Frame = +2 Query: 530 PVILLICFGAIAFFPSVLIP---SSPFMWIA----GMTFGYGYGFLIITTAMSIGMSLPF 688 P +LL C AF + I +SPF + +F G L + ++ + SL F Sbjct: 130 PRLLLACVLISAFTTCLYITLSQASPFPELVTTRNNTSFNINEGILSLVVSLVLSSSLQF 189 Query: 689 CIG----SAFHSRIHRWLEKWPKKAAFVRLAGEGDWFHQFRA-VALLRISPFPYIVFNYA 853 I S + R ++K K A G W Q A V +++ + I++ Sbjct: 190 IINVTSASLLIHSLRRHIQKMQKNAT-------GFWNPQTEAHVGAMKLMVYFLILYIPY 242 Query: 854 SVATNVQYCPYIAGSMAGT 910 SVAT VQY P+ AG GT Sbjct: 243 SVATLVQYLPFYAGMDMGT 261
>Q646D3:TA2R4_PANPA Taste receptor type 2 member 4 - Pan paniscus (Pygmy chimpanzee)| (Bonobo) Length = 299 Score = 38.5 bits (88), Expect = 0.067 Identities = 40/139 (28%), Positives = 59/139 (42%), Gaps = 12/139 (8%) Frame = +2 Query: 530 PVILLICFGAIAFFPSVLIP---SSPFMWIA----GMTFGYGYGFLIITTAMSIGMSLPF 688 P +LL C AF + I +SPF + +F G L + ++ + SL F Sbjct: 130 PRLLLACVLISAFTTCLYITLSQASPFPELVTTRNNTSFNINEGILSLVVSLVLSSSLQF 189 Query: 689 CIG----SAFHSRIHRWLEKWPKKAAFVRLAGEGDWFHQFRA-VALLRISPFPYIVFNYA 853 I S + R ++K K A G W Q A V +++ + I++ Sbjct: 190 IINVTSASLLIHSLRRHIQKMQKNAT-------GFWNPQTEAHVGAMKLMVYFLILYIPY 242 Query: 854 SVATNVQYCPYIAGSMAGT 910 SVAT VQY P+ AG GT Sbjct: 243 SVATLVQYLPFYAGMDMGT 261
>Q9NYW5:TA2R4_HUMAN Taste receptor type 2 member 4 - Homo sapiens (Human)| Length = 299 Score = 38.5 bits (88), Expect = 0.067 Identities = 40/139 (28%), Positives = 59/139 (42%), Gaps = 12/139 (8%) Frame = +2 Query: 530 PVILLICFGAIAFFPSVLIP---SSPFMWIA----GMTFGYGYGFLIITTAMSIGMSLPF 688 P +LL C AF + I +SPF + +F G L + ++ + SL F Sbjct: 130 PRLLLACVLISAFTTCLYITLSQASPFPELVTTRNNTSFNISEGILSLVVSLVLSSSLQF 189 Query: 689 CIG----SAFHSRIHRWLEKWPKKAAFVRLAGEGDWFHQFRA-VALLRISPFPYIVFNYA 853 I S + R ++K K A G W Q A V +++ + I++ Sbjct: 190 IINVTSASLLIHSLRRHIQKMQKNAT-------GFWNPQTEAHVGAMKLMVYFLILYIPY 242 Query: 854 SVATNVQYCPYIAGSMAGT 910 SVAT VQY P+ AG GT Sbjct: 243 SVATLVQYLPFYAGMDMGT 261
>Q645Y8:TA2R4_GORGO Taste receptor type 2 member 4 - Gorilla gorilla gorilla (Lowland| gorilla) Length = 299 Score = 38.5 bits (88), Expect = 0.067 Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 13/137 (9%) Frame = +2 Query: 539 LLICFGAIAFFPSVLI----PSSPFMWIA----GMTFGYGYGFLIITTAMSIGMSLPFCI 694 LL+ F I+ F + L +SPF + +F G L + ++ + SL F I Sbjct: 132 LLLAFVLISAFTTCLYITLSQASPFPELVTTRNNTSFNISEGILSLVVSLVLSSSLQFII 191 Query: 695 G----SAFHSRIHRWLEKWPKKAAFVRLAGEGDWFHQFRA-VALLRISPFPYIVFNYASV 859 S + R ++K K A G W Q A V +++ + I++ SV Sbjct: 192 NVTSASLLIHSLRRHIQKMQKNAT-------GFWNPQMEAHVGAMKLMVYFLILYIPYSV 244 Query: 860 ATNVQYCPYIAGSMAGT 910 AT VQY P+ AG GT Sbjct: 245 ATLVQYLPFYAGMDMGT 261
>P06568:YTXB_BACSU UPF0043 membrane protein ytxB - Bacillus subtilis| Length = 213 Score = 37.0 bits (84), Expect = 0.19 Identities = 33/128 (25%), Positives = 52/128 (40%) Frame = +2 Query: 542 LICFGAIAFFPSVLIPSSPFMWIAGMTFGYGYGFLIITTAMSIGMSLPFCIGSAFHSRIH 721 L+ G P VL P S G+ FG G L ++ F F ++ + Sbjct: 47 LMFIGISIVRPLVLFPVSVISIAGGLAFGPLLGTLYTLFGSMCASAVSFFAAGLFSAKKN 106 Query: 722 RWLEKWPKKAAFVRLAGEGDWFHQFRAVALLRISPFPYIVFNYASVATNVQYCPYIAGSM 901 E+ A + + +F+ F LLRI P + +YA+ +NV+ PY A + Sbjct: 107 GHYERLE---AIQKQMEDNGFFYIF----LLRILPINFDFVSYAAGLSNVKALPYFAATA 159 Query: 902 AGTIHETL 925 G I T+ Sbjct: 160 VGIIPGTI 167
>P02545:LMNA_HUMAN Lamin-A/C - Homo sapiens (Human)| Length = 664 Score = 37.0 bits (84), Expect = 0.20 Identities = 21/62 (33%), Positives = 33/62 (53%) Frame = +1 Query: 817 DFPVSIYSF*LRFRGYKCPILSIYSWFNGGNHT*NPPCNL*WEARSKLGCGNEPRVFLIS 996 D P+ Y F +F +++I W G T +PP +L W+A++ GCGN R LI+ Sbjct: 475 DDPLLTYRFPPKFTLKAGQVVTI--WAAGAGATHSPPTDLVWKAQNTWGCGNSLRTALIN 532 Query: 997 GS 1002 + Sbjct: 533 ST 534
>P48678:LMNA_MOUSE Lamin-A/C - Mus musculus (Mouse)| Length = 665 Score = 36.6 bits (83), Expect = 0.26 Identities = 20/62 (32%), Positives = 34/62 (54%) Frame = +1 Query: 817 DFPVSIYSF*LRFRGYKCPILSIYSWFNGGNHT*NPPCNL*WEARSKLGCGNEPRVFLIS 996 D P+ Y F +F +++I W +G T +PP +L W+A++ GCG+ R LI+ Sbjct: 475 DDPLMTYRFPPKFTLKAGQVVTI--WASGAGATHSPPTDLVWKAQNTWGCGSSLRTALIN 532 Query: 997 GS 1002 + Sbjct: 533 ST 534
>P48679:LMNA_RAT Lamin-A - Rattus norvegicus (Rat)| Length = 665 Score = 36.2 bits (82), Expect = 0.33 Identities = 20/62 (32%), Positives = 33/62 (53%) Frame = +1 Query: 817 DFPVSIYSF*LRFRGYKCPILSIYSWFNGGNHT*NPPCNL*WEARSKLGCGNEPRVFLIS 996 D P+ Y F +F +++I W +G T +PP +L W+A++ GCG R LI+ Sbjct: 475 DDPLMTYRFPPKFTLKAGQVVTI--WASGAGATHSPPTDLVWKAQNTWGCGTSLRTALIN 532 Query: 997 GS 1002 + Sbjct: 533 AT 534
>Q3ZD69:LMNA_PIG Lamin-A/C - Sus scrofa (Pig)| Length = 664 Score = 36.2 bits (82), Expect = 0.33 Identities = 20/62 (32%), Positives = 33/62 (53%) Frame = +1 Query: 817 DFPVSIYSF*LRFRGYKCPILSIYSWFNGGNHT*NPPCNL*WEARSKLGCGNEPRVFLIS 996 D P+ Y F +F +++I W G T +PP +L W++++ GCGN R LI+ Sbjct: 475 DDPLLTYRFPPKFTLKAGQVVTI--WAAGAGATHSPPADLVWKSQNTWGCGNSLRTALIN 532 Query: 997 GS 1002 + Sbjct: 533 ST 534
>Q2H2J1:DBP4_CHAGB ATP-dependent RNA helicase DBP4 - Chaetomium globosum (Soil fungus)| Length = 825 Score = 35.8 bits (81), Expect = 0.43 Identities = 13/27 (48%), Positives = 21/27 (77%) Frame = -3 Query: 463 QENDGGRGGAGEEDPEYGDLRPPPDRA 383 +E+DGGRGG GE++ + G++ PP +A Sbjct: 751 EESDGGRGGGGEDEGDDGEVEPPRKKA 777
>Q645U4:TA2R4_PONPY Taste receptor type 2 member 4 - Pongo pygmaeus (Orangutan)| Length = 299 Score = 35.4 bits (80), Expect = 0.57 Identities = 39/139 (28%), Positives = 58/139 (41%), Gaps = 12/139 (8%) Frame = +2 Query: 530 PVILLICFGAIAFFPSVLIP---SSPFMWIA----GMTFGYGYGFLIITTAMSIGMSLPF 688 P +LL C AF + I +SPF + +F G L + ++ + SL F Sbjct: 130 PRLLLACVLISAFTTCLYITLSQASPFPELVTKRNNTSFNTHEGILSLVVSLVLSSSLQF 189 Query: 689 CIG----SAFHSRIHRWLEKWPKKAAFVRLAGEGDWFHQFRA-VALLRISPFPYIVFNYA 853 I S + R ++K K A G W Q A V +++ + I++ Sbjct: 190 IINVTSASLLIHSLRRHIQKMQKNAT-------GFWNPQTEAHVGAMKLMIYFLILYIPY 242 Query: 854 SVATNVQYCPYIAGSMAGT 910 SVAT VQY P+ G GT Sbjct: 243 SVATLVQYLPFYVGMDMGT 261
>P70371:TERF1_MOUSE Telomeric repeat-binding factor 1 - Mus musculus (Mouse)| Length = 421 Score = 34.7 bits (78), Expect = 0.97 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 6/72 (8%) Frame = -3 Query: 664 HRRCNYQKAITISKGHPRNPHKGRRRYQDTWEKSD-----C-TKTY*KNNWSAECS*LPV 503 +RR + + + +S+ P K RR + TW + C K Y + NW+ S Sbjct: 340 NRRTSGRNRLCVSENQPDTDDKSGRRKRQTWLWEEDRILKCGVKKYGEGNWAKILSHYKF 399 Query: 502 NNRHNHLLDDEW 467 NNR + +L D W Sbjct: 400 NNRTSVMLKDRW 411
>P36164:TVP38_YEAST TLG2-vesicle protein of 38 kDa - Saccharomyces cerevisiae (Baker's| yeast) Length = 337 Score = 33.5 bits (75), Expect = 2.2 Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 2/152 (1%) Frame = +2 Query: 536 ILLICFGAIAFFPSVLIPSSPFMWIAGMTFGYGY-GFLIITTAMSIGMSLPFCI-GSAFH 709 IL++ +AF P +I S G+ +G + G++ + G F + + H Sbjct: 139 ILMVLIFFVAFPP--MIGYSLLSTTTGLIYGVSFEGWVTLALGSVTGSIASFVVFKTILH 196 Query: 710 SRIHRWLEKWPKKAAFVRLAGEGDWFHQFRAVALLRISPFPYIVFNYASVATNVQYCPYI 889 SR + + + A + E + + +ALLR+ PFPY + N A Sbjct: 197 SRAEKLVHLNRRFEALASILQENN---SYWILALLRLCPFPYSLTNGAIAGVYGISVRNF 253 Query: 890 AGSMAGTIHETLLAIYSGKLVQSLAVATSQGS 985 + + T + + ++ G V+SLA + S GS Sbjct: 254 SIANIITTPKLFIYLFIGSRVKSLAESESTGS 285
>P54274:TERF1_HUMAN Telomeric repeat-binding factor 1 - Homo sapiens (Human)| Length = 439 Score = 33.5 bits (75), Expect = 2.2 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 6/66 (9%) Frame = -3 Query: 646 QKAITISKGHPRNP--HKGRRRYQDTWEKS----DCTKTY*KNNWSAECS*LPVNNRHNH 485 + I +SK P P H+ R+R WE+ + Y + NWS NNR + Sbjct: 359 ESRIPVSKSQPVTPEKHRARKRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSV 418 Query: 484 LLDDEW 467 +L D W Sbjct: 419 MLKDRW 424
>O55036:TERF1_CRIGR Telomeric repeat-binding factor 1 - Cricetulus griseus (Chinese| hamster) Length = 438 Score = 33.5 bits (75), Expect = 2.2 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 6/66 (9%) Frame = -3 Query: 646 QKAITISKGHPRNP--HKGRRRYQDTWEKS----DCTKTY*KNNWSAECS*LPVNNRHNH 485 + I +SK P P H+ R+R WE+ + Y + NWS NNR + Sbjct: 359 ESRIPVSKSQPVTPEKHRARKRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSV 418 Query: 484 LLDDEW 467 +L D W Sbjct: 419 MLKDRW 424
>Q646F1:TA2R4_PAPHA Taste receptor type 2 member 4 - Papio hamadryas (Hamadryas baboon)| Length = 299 Score = 33.5 bits (75), Expect = 2.2 Identities = 39/139 (28%), Positives = 56/139 (40%), Gaps = 12/139 (8%) Frame = +2 Query: 530 PVILLICFGAIAFFPSVLIP---SSPFMWIA----GMTFGYGYGFLIITTAMSIGMSLPF 688 P +L C AF + I +SPF + +F G L + + + SL F Sbjct: 130 PRLLPACVLISAFTTCLYITLSQASPFPELVTKRNNTSFNISEGILSLVVSFVLSSSLQF 189 Query: 689 CIGSAFHS----RIHRWLEKWPKKAAFVRLAGEGDWFHQFRA-VALLRISPFPYIVFNYA 853 I S + R + K K A G W Q A V +++ + I++ Sbjct: 190 IINVTSASLLIYSLRRHIRKMQKNAT-------GFWNPQTEAHVGAMKLMIYFLILYIPY 242 Query: 854 SVATNVQYCPYIAGSMAGT 910 SVAT VQY P+ AG GT Sbjct: 243 SVATLVQYLPFYAGMDMGT 261
>P76219:YDJX_ECOLI UPF0043 membrane protein ydjX - Escherichia coli| Length = 236 Score = 32.7 bits (73), Expect = 3.7 Identities = 29/122 (23%), Positives = 47/122 (38%), Gaps = 10/122 (8%) Frame = +2 Query: 578 VLIPSSPFMWIAGMTFGYGYGFLIITTAMSIGMSLPFCIGSAFHSRIHRWLEKWPKKAAF 757 +L+P S + G+ FG G L+ A ++ S F L +W + Sbjct: 61 LLLPGSILVIAGGIVFGPLLGTLLSLIAATLASSCSFL------------LARWLGRDLL 108 Query: 758 VRLAGEGDWFHQFRA---------VALLRISP-FPYIVFNYASVATNVQYCPYIAGSMAG 907 ++ G + F + L R+ P FPY + NYA T + + PY S Sbjct: 109 LKYVGHSNTFQAIEKGIARNGIDFLILTRLIPLFPYNIQNYAYGLTTIAFWPYTLISALT 168 Query: 908 TI 913 T+ Sbjct: 169 TL 170
>P11048:LMNA_XENLA Lamin-A - Xenopus laevis (African clawed frog)| Length = 665 Score = 32.7 bits (73), Expect = 3.7 Identities = 14/38 (36%), Positives = 23/38 (60%) Frame = +1 Query: 892 WFNGGNHT*NPPCNL*WEARSKLGCGNEPRVFLISGSD 1005 W +G T +PP +L W+A+S G G+ R L++ S+ Sbjct: 495 WASGAGATNSPPSDLVWKAQSSWGTGDSIRTALLTSSN 532
>Q767M0:PHTNS_PIG Phostensin - Sus scrofa (Pig)| Length = 618 Score = 32.3 bits (72), Expect = 4.8 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -3 Query: 454 DGGRGGAGEEDPEYGDLRPPPDRAASQQP 368 D G GG+ +++ E G+LRPPP S P Sbjct: 412 DAGTGGSRQQEEEAGELRPPPAAPLSPPP 440
>Q96R69:OR4F4_HUMAN Olfactory receptor 4F4 - Homo sapiens (Human)| Length = 305 Score = 32.3 bits (72), Expect = 4.8 Identities = 27/121 (22%), Positives = 52/121 (42%), Gaps = 9/121 (7%) Frame = +2 Query: 617 MTFGYGYGFLIITTAMSIGMSLPFCIGS---AFHSRIHRWLEKWPKKAAFVRLAGEGDWF 787 M +G GFL + ++ + LPFC + +F+ + R ++LA + Sbjct: 138 MAVAWGIGFLHSVSQLAFAVHLPFCGPNEVDSFYCDLPR----------VIKLACTDTYR 187 Query: 788 HQFRAVA---LLRISPFPYIVFNYASVATNVQYCPYIAGSMA---GTIHETLLAIYSGKL 949 +A +L + F ++ +Y + +Q+CP S A T H T++ ++ G Sbjct: 188 LDIMVIANSGVLTVCSFVLLIISYTIILMTIQHCPLDKSSKALSTLTAHITVVLLFFGPC 247 Query: 950 V 952 V Sbjct: 248 V 248
>Q6DBP8:GATA6_ARATH GATA transcription factor 6 - Arabidopsis thaliana (Mouse-ear| cress) Length = 303 Score = 25.4 bits (54), Expect(2) = 5.5 Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 17/93 (18%) Frame = +2 Query: 770 GEGDWFHQFRAVALLRISPFPYIVFNYASVATNVQYCP--------------YIAGSMAG 907 GEGDW +F+ + + FP + + S + + P Y + +++ Sbjct: 41 GEGDWVDRFQDLEPPPMDMFPTLPSDLTSCGSGMAKAPRVDIQRNIPALKQSYSSEALSS 100 Query: 908 TIHETLL--AIYSGKLVQSLA-VATSQGSFLSV 997 T+H++ I KL QSL+ V+ + S+ S+ Sbjct: 101 TLHQSSAPPEIKVSKLFQSLSPVSVLENSYGSL 133 Score = 25.4 bits (54), Expect(2) = 5.5 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +3 Query: 1065 MRKRRSKNCRLRMSYVEISESNLDARSPPG 1154 MR +R + LR+SY+ SE +S PG Sbjct: 150 MRSKRKRPTTLRLSYLFPSEPRKPEKSTPG 179
>P44832:Y703_HAEIN Uncharacterized protein HI0703 - Haemophilus influenzae| Length = 192 Score = 32.0 bits (71), Expect = 6.3 Identities = 30/148 (20%), Positives = 56/148 (37%), Gaps = 6/148 (4%) Frame = +2 Query: 503 DWQSRTFSRPVILLICFGAIAFFPS----VLIPSSPFMWIAGMTFGYGYGFLIITTAMSI 670 +W F+ + + F FFP +LIP S + + F + A I Sbjct: 13 EWSKHRFAVFWLSFVSFIEAIFFPIPPDVMLIPMSMSKPKSAVKFAF-----YTAIASVI 67 Query: 671 GMSLPFCIGSAFHSRIHRWLEKWPKKAAFVRLAGEGDWFHQFRAVALL--RISPFPYIVF 844 G + + IG + +++W A + + WF Q+ + + SP PY VF Sbjct: 68 GGIIGYAIGFYATDWVENIVQQWGYAAHWAKAVS---WFEQWGVLVVFVAGFSPIPYKVF 124 Query: 845 NYASVATNVQYCPYIAGSMAGTIHETLL 928 + + + P++ + + LL Sbjct: 125 TLCAGVMQMAFFPFVITAFVSRLARFLL 152
>P90520:TOP2M_DICDI DNA topoisomerase II, mitochondrial precursor - Dictyostelium| discoideum (Slime mold) Length = 1282 Score = 32.0 bits (71), Expect = 6.3 Identities = 17/43 (39%), Positives = 22/43 (51%) Frame = +3 Query: 678 HYHFV*DLRSIPEYTDGWKNGRRKQLLLDLLVKEIGSISLGQL 806 HY + +LRSIP DG K G+RK L + I + QL Sbjct: 799 HYSWAANLRSIPSLIDGLKPGQRKILFASFKRRLTNEIKVSQL 841 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 235,476,279 Number of extensions: 5208809 Number of successful extensions: 14315 Number of sequences better than 10.0: 29 Number of HSP's gapped: 14302 Number of HSP's successfully gapped: 30 Length of query: 461 Length of database: 100,686,439 Length adjustment: 117 Effective length of query: 344 Effective length of database: 68,593,924 Effective search space: 23596309856 Effective search space used: 23596309856 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
