ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf142l14 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK102872:Os03g0853800 | 353 | 1e-97 | 2 | AK059849:Os03g0853800 | 353 | 1e-97 | 3 | AK120043:Os03g0853800 | 288 | 4e-78 | 4 | AK058371:Os03g0853800 | 126 | 2e-29 | 5 | AK106299:Os12g0577900 | 30 | 2.7 | 6 | AK071761:Os06g0111400 | 30 | 3.5 | 7 | AK069834:Os06g0111400 | 30 | 3.5 | 8 | Os10g0196400:Os10g0196400 | 28 | 7.8 | 9 | AK119878: | 28 | 7.8 |
|---|
>AK102872:Os03g0853800 | Length = 260 Score = 353 bits (906), Expect = 1e-97 Identities = 177/225 (78%), Positives = 184/225 (81%) Frame = +2 Query: 173 DFQFPGSATWRHFSTCKPNPLAKGDSFGSMGSLYSQTRWASQSTAVKETDPSGGKISIGP 352 D Q PG W+HFST KPNPL K D GS+ LYSQ RWASQ+ AVKET+ SG KISIGP Sbjct: 36 DLQAPGCIAWKHFSTFKPNPLPKLDGLGSVTCLYSQARWASQAAAVKETENSGSKISIGP 95 Query: 353 KSKQIKEDDKDDGLVYQGPISSTIXXXXXXXXXXXXXXXXXGPVITFMTSPDMNVILKGG 532 KSKQIKEDDKDD LVYQGPISSTI GPVITFMTSPDMNVILKG Sbjct: 96 KSKQIKEDDKDDRLVYQGPISSTIRKVKLLSLSTCCLSVSLGPVITFMTSPDMNVILKGA 155 Query: 533 VASTVIFLSATTTAALHWFVSPYIHKLRWRQGSDSFEAEIMSWLATPLKKTIKFADIRPA 712 VASTVIFLSATTTAALHWFVSPYIHKLRWR GSDSFEAEIMSWLATPL +TIKFAD+RP Sbjct: 156 VASTVIFLSATTTAALHWFVSPYIHKLRWRPGSDSFEAEIMSWLATPLTRTIKFADVRPP 215 Query: 713 ETNRPFVTFRAEGNFYFVDADHFSNKALLERLTPKLPNESAFKNL 847 ETNRPFVTFRAEGNFYFVDA+HF NKALL RLTPK PNESAFKNL Sbjct: 216 ETNRPFVTFRAEGNFYFVDAEHFPNKALLARLTPKHPNESAFKNL 260
>AK059849:Os03g0853800 | Length = 260 Score = 353 bits (906), Expect = 1e-97 Identities = 177/225 (78%), Positives = 184/225 (81%) Frame = +2 Query: 173 DFQFPGSATWRHFSTCKPNPLAKGDSFGSMGSLYSQTRWASQSTAVKETDPSGGKISIGP 352 D Q PG W+HFST KPNPL K D GS+ LYSQ RWASQ+ AVKET+ SG KISIGP Sbjct: 36 DLQAPGCIAWKHFSTFKPNPLPKLDGLGSVTCLYSQARWASQAAAVKETENSGSKISIGP 95 Query: 353 KSKQIKEDDKDDGLVYQGPISSTIXXXXXXXXXXXXXXXXXGPVITFMTSPDMNVILKGG 532 KSKQIKEDDKDD LVYQGPISSTI GPVITFMTSPDMNVILKG Sbjct: 96 KSKQIKEDDKDDRLVYQGPISSTIRKVKLLSLSTCCLSVSLGPVITFMTSPDMNVILKGA 155 Query: 533 VASTVIFLSATTTAALHWFVSPYIHKLRWRQGSDSFEAEIMSWLATPLKKTIKFADIRPA 712 VASTVIFLSATTTAALHWFVSPYIHKLRWR GSDSFEAEIMSWLATPL +TIKFAD+RP Sbjct: 156 VASTVIFLSATTTAALHWFVSPYIHKLRWRPGSDSFEAEIMSWLATPLTRTIKFADVRPP 215 Query: 713 ETNRPFVTFRAEGNFYFVDADHFSNKALLERLTPKLPNESAFKNL 847 ETNRPFVTFRAEGNFYFVDA+HF NKALL RLTPK PNESAFKNL Sbjct: 216 ETNRPFVTFRAEGNFYFVDAEHFPNKALLARLTPKHPNESAFKNL 260
>AK120043:Os03g0853800 | Length = 222 Score = 288 bits (737), Expect = 4e-78 Identities = 152/225 (67%), Positives = 156/225 (69%) Frame = +2 Query: 173 DFQFPGSATWRHFSTCKPNPLAKGDSFGSMGSLYSQTRWASQSTAVKETDPSGGKISIGP 352 D Q PG W+HFST KPNPL P Sbjct: 36 DLQAPGCIAWKHFSTFKPNPL--------------------------------------P 57 Query: 353 KSKQIKEDDKDDGLVYQGPISSTIXXXXXXXXXXXXXXXXXGPVITFMTSPDMNVILKGG 532 KSKQIKEDDKDD LVYQGPISSTI GPVITFMTSPDMNVILKG Sbjct: 58 KSKQIKEDDKDDRLVYQGPISSTIRKVKLLSLSTCCLSVSLGPVITFMTSPDMNVILKGA 117 Query: 533 VASTVIFLSATTTAALHWFVSPYIHKLRWRQGSDSFEAEIMSWLATPLKKTIKFADIRPA 712 VASTVIFLSATTTAALHWFVSPYIHKLRWR GSDSFEAEIMSWLATPL +TIKFAD+RP Sbjct: 118 VASTVIFLSATTTAALHWFVSPYIHKLRWRPGSDSFEAEIMSWLATPLTRTIKFADVRPP 177 Query: 713 ETNRPFVTFRAEGNFYFVDADHFSNKALLERLTPKLPNESAFKNL 847 ETNRPFVTFRAEGNFYFVDA+HF NKALL RLTPK PNESAFKNL Sbjct: 178 ETNRPFVTFRAEGNFYFVDAEHFPNKALLARLTPKHPNESAFKNL 222
>AK058371:Os03g0853800 | Length = 68 Score = 126 bits (317), Expect = 2e-29 Identities = 60/68 (88%), Positives = 63/68 (92%) Frame = +2 Query: 644 AEIMSWLATPLKKTIKFADIRPAETNRPFVTFRAEGNFYFVDADHFSNKALLERLTPKLP 823 AEIMSWLATPL +TIKFAD+RP ETNRPFVTFRAEGNFYFVDA+HF NKALL RLTPK P Sbjct: 1 AEIMSWLATPLTRTIKFADVRPPETNRPFVTFRAEGNFYFVDAEHFPNKALLARLTPKHP 60 Query: 824 NESAFKNL 847 NESAFKNL Sbjct: 61 NESAFKNL 68
>AK106299:Os12g0577900 | Length = 357 Score = 30.0 bits (66), Expect = 2.7 Identities = 20/63 (31%), Positives = 27/63 (42%) Frame = -2 Query: 625 LSPPQLVDVRAHEPVQGCGRGGAEEDHGGCDSSLEDHIHVGRGHERNHRA*RHGEAAGGQ 446 L P+L DVR H +G RGG D G ++ RG RA + A G Sbjct: 174 LDGPELDDVRVHRADRGDARGGERLDEEGVGEAVPARHGGERGERVARRAPQRVGAEHGV 233 Query: 445 GQK 437 G++ Sbjct: 234 GEE 236
>AK071761:Os06g0111400 | Length = 679 Score = 29.6 bits (65), Expect = 3.5 Identities = 14/45 (31%), Positives = 26/45 (57%) Frame = +1 Query: 250 LWLNGFSVQPDKMGFSIHCCQRN*PQWRQDKHWAQIQADQGGRQG 384 L +NGF + PD+M S+ CQR + + ++W ++ G++G Sbjct: 102 LIINGFPLNPDEMA-SLLSCQRPPQKLKPGRYWYDKESGLWGKEG 145
>AK069834:Os06g0111400 | Length = 867 Score = 29.6 bits (65), Expect = 3.5 Identities = 14/45 (31%), Positives = 26/45 (57%) Frame = +1 Query: 250 LWLNGFSVQPDKMGFSIHCCQRN*PQWRQDKHWAQIQADQGGRQG 384 L +NGF + PD+M S+ CQR + + ++W ++ G++G Sbjct: 290 LIINGFPLNPDEMA-SLLSCQRPPQKLKPGRYWYDKESGLWGKEG 333
>Os10g0196400:Os10g0196400 | Length = 302 Score = 28.5 bits (62), Expect = 7.8 Identities = 24/80 (30%), Positives = 30/80 (37%), Gaps = 9/80 (11%) Frame = +1 Query: 475 RPCDYVHDLARHEC---DPQGRSRIHRDLPQRHHDR------SPALVREPVHPQAEVATG 627 RPC+ V +A H C DP+ R+ H D AL+ EP+ P E Sbjct: 60 RPCELVQQVADHGCHEADPELRAGAHPTASAEGEDAVVAALDVNALLEEPLRPLLERVV- 118 Query: 628 FRQLRGRDNVVAGYTPQEDD 687 D V Y P DD Sbjct: 119 ------PDTGVTCYGPHVDD 132
>AK119878: | Length = 630 Score = 28.5 bits (62), Expect = 7.8 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 7/59 (11%) Frame = +2 Query: 191 SATWRHFSTCKPNPLAKGDSFGSMGSLYSQT-------RWASQSTAVKETDPSGGKISI 346 +++WR + P P A S G + YS++ +S S AV E D SG K+ + Sbjct: 494 TSSWRTTTPAAPAPAASATSSGDRWASYSRSSSSNGTGAASSSSQAVFEADLSGFKVDV 552 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 26,779,486 Number of extensions: 598059 Number of successful extensions: 1986 Number of sequences better than 10.0: 9 Number of HSP's gapped: 1983 Number of HSP's successfully gapped: 9 Length of query: 333 Length of database: 15,399,855 Length adjustment: 101 Effective length of query: 232 Effective length of database: 11,355,714 Effective search space: 2634525648 Effective search space used: 2634525648 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
