| Clone Name | FLbaf142l14 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT834303.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA004G24, full insert sequence Length = 944 Score = 458 bits (231), Expect = e-125 Identities = 552/659 (83%) Strand = Plus / Plus Query: 198 catggaggcatttctcaacatgcaagcctaatcctcttgcaaaaggggatagctttggct 257 |||||| |||||||||||||| |||||||||||||||| ||||| ||| || |||| | Sbjct: 158 catggaagcatttctcaacattcaagcctaatcctcttccaaaacttgatggccttggtt 217 Query: 258 caatgggttctctgtacagccagacaagatgggcttctcaatccactgctgtcaaagaaa 317 || | || | ||||||| ||| ||||||||||||||||| | |||||||| ||||||| Sbjct: 218 cagtcacttgtttgtacagtcaggcaagatgggcttctcaagctactgctgttaaagaaa 277 Query: 318 ctgaccccagtggcggcaagataagcattgggcccaaatccaagcagatcaaggaggacg 377 |||| |||||| ||||||||||||||||||| |||||||||||||||||||| || | Sbjct: 278 ctgaaaatagtggcagcaagataagcattgggccaaaatccaagcagatcaaggaagatg 337 Query: 378 acaaggatgatggactggtttatcaaggaccaatatcatcaaccatcaagaaagtgaagc 437 |||| ||||| | || ||||| || ||||| |||||||| ||||| | |||||||||| Sbjct: 338 acaaagatgacaggctagtttaccagggacctatatcatcgaccataagaaaagtgaagc 397 Query: 438 ttctgtccctgtccacctgctgcctctccgtgtcgctaggccctgtgattacgttcatga 497 |||| || |||||||||||||| ||||| |||||||| ||||||||||| || ||||||| Sbjct: 398 ttctttctctgtccacctgctgtctctctgtgtcgctcggccctgtgataacattcatga 457 Query: 498 cctcgcccgacatgaatgtgatcctcaagggaggagtcgcatccaccgtgatcttcctca 557 | || || || |||||||| ||||||||||| | || |||||||| || || ||||||| Sbjct: 458 cttccccagatatgaatgtaatcctcaagggcgctgttgcatccactgtcattttcctca 517 Query: 558 gcgccaccacgaccgcagccctgcactggttcgtgagcccgtacatccacaagctgaggt 617 | || ||||| || |||||| | |||||||| |||||||||||||| |||||||| |||| Sbjct: 518 gtgctaccacaacggcagccttacactggtttgtgagcccgtacattcacaagctcaggt 577 Query: 618 ggcgacagggttcagacagcttcgaggcagagataatgtcgtggctggctacacccctca 677 |||||| |||||||| ||||| || |||||||| ||||| ||||||||||||||||||| Sbjct: 578 ggcgaccaggttcagatagctttgaagcagagattatgtcatggctggctacacccctca 637 Query: 678 agaagacgatcaagtttgctgacatcaggcccgcagagactaaccggcctttcgtcacct 737 | ||| |||||||||||||| ||||||| ||||||| ||| | ||||| ||||| | Sbjct: 638 caaggacaatcaagtttgctgatgtcaggcctccagagaccaacagaccttttgtcactt 697 Query: 738 tcagggccgaagggaacttctacttcgtcgacgccgatcacttctccaacaaggccttgc 797 | ||||| |||||||||||||| || || || ||||| |||||| | |||||||| ||| Sbjct: 698 ttagggctgaagggaacttctattttgttgatgccgagcacttcccgaacaaggctttgt 757 Query: 798 tggagaggctcacccctaagctccctaacgagtctgcgttcaagaacttgtgatggaag 856 ||| |||||| || || |||| |||||| |||||||| |||||||||||||||| |||| Sbjct: 758 tggcgaggcttactcccaagcaccctaatgagtctgcattcaagaacttgtgattgaag 816 Score = 48.1 bits (24), Expect = 0.061 Identities = 27/28 (96%) Strand = Plus / Plus Query: 60 ccatggcgacggcgaggctgcgatccgc 87 ||||||||||||||||||| |||||||| Sbjct: 26 ccatggcgacggcgaggctccgatccgc 53
>gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006O08 map S15179S, complete sequence Length = 166005 Score = 450 bits (227), Expect = e-123 Identities = 551/659 (83%) Strand = Plus / Plus Query: 198 catggaggcatttctcaacatgcaagcctaatcctcttgcaaaaggggatagctttggct 257 |||||| |||||||||||||| |||||||||||||||| ||||| ||| || |||| | Sbjct: 63374 catggaagcatttctcaacattcaagcctaatcctcttccaaaacttgatggccttggtt 63433 Query: 258 caatgggttctctgtacagccagacaagatgggcttctcaatccactgctgtcaaagaaa 317 || | || | ||||||| ||| ||||||||||||||||| | ||||||| ||||||| Sbjct: 63434 cagtcacttgtttgtacagtcaggcaagatgggcttctcaagctgctgctgttaaagaaa 63493 Query: 318 ctgaccccagtggcggcaagataagcattgggcccaaatccaagcagatcaaggaggacg 377 |||| |||||| ||||||||||||||||||| |||||||||||||||||||| || | Sbjct: 63494 ctgaaaatagtggcagcaagataagcattgggccaaaatccaagcagatcaaggaagatg 63553 Query: 378 acaaggatgatggactggtttatcaaggaccaatatcatcaaccatcaagaaagtgaagc 437 |||| ||||| | || ||||| || ||||| |||||||| ||||| | |||||||||| Sbjct: 63554 acaaagatgacaggctagtttaccagggacctatatcatcgaccataagaaaagtgaagc 63613 Query: 438 ttctgtccctgtccacctgctgcctctccgtgtcgctaggccctgtgattacgttcatga 497 |||| || |||||||||||||| ||||| |||||||| ||||||||||| || ||||||| Sbjct: 63614 ttctttctctgtccacctgctgtctctctgtgtcgcttggccctgtgataacattcatga 63673 Query: 498 cctcgcccgacatgaatgtgatcctcaagggaggagtcgcatccaccgtgatcttcctca 557 | || || || |||||||| ||||||||||| | || |||||||| || || ||||||| Sbjct: 63674 catccccagatatgaatgtaatcctcaagggcgctgttgcatccactgtcattttcctca 63733 Query: 558 gcgccaccacgaccgcagccctgcactggttcgtgagcccgtacatccacaagctgaggt 617 | || ||||| || |||||| | |||||||| |||||||||||||| |||||||| |||| Sbjct: 63734 gtgctaccacaacggcagccttacactggtttgtgagcccgtacattcacaagctcaggt 63793 Query: 618 ggcgacagggttcagacagcttcgaggcagagataatgtcgtggctggctacacccctca 677 |||||| |||||||| ||||| || |||||||| ||||| ||||||||||||||||||| Sbjct: 63794 ggcgaccaggttcagatagctttgaagcagagattatgtcatggctggctacacccctca 63853 Query: 678 agaagacgatcaagtttgctgacatcaggcccgcagagactaaccggcctttcgtcacct 737 | ||| |||||||||||||| ||||||| ||||||| ||| | ||||| ||||| | Sbjct: 63854 caaggacaatcaagtttgctgatgtcaggcctccagagaccaacagaccttttgtcactt 63913 Query: 738 tcagggccgaagggaacttctacttcgtcgacgccgatcacttctccaacaaggccttgc 797 | ||||| |||||||||||||| || || || ||||| |||||| | |||||||| ||| Sbjct: 63914 ttagggctgaagggaacttctattttgttgatgccgagcacttcccgaacaaggctttgt 63973 Query: 798 tggagaggctcacccctaagctccctaacgagtctgcgttcaagaacttgtgatggaag 856 ||| |||||| || || |||| |||||| |||||||| |||||||||||||||| |||| Sbjct: 63974 tggcgaggcttactcccaagcaccctaatgagtctgcattcaagaacttgtgattgaag 64032 Score = 48.1 bits (24), Expect = 0.061 Identities = 27/28 (96%) Strand = Plus / Plus Query: 60 ccatggcgacggcgaggctgcgatccgc 87 ||||||||||||||||||| |||||||| Sbjct: 62462 ccatggcgacggcgaggctccgatccgc 62489
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 450 bits (227), Expect = e-123 Identities = 551/659 (83%) Strand = Plus / Plus Query: 198 catggaggcatttctcaacatgcaagcctaatcctcttgcaaaaggggatagctttggct 257 |||||| |||||||||||||| |||||||||||||||| ||||| ||| || |||| | Sbjct: 35755669 catggaagcatttctcaacattcaagcctaatcctcttccaaaacttgatggccttggtt 35755728 Query: 258 caatgggttctctgtacagccagacaagatgggcttctcaatccactgctgtcaaagaaa 317 || | || | ||||||| ||| ||||||||||||||||| | ||||||| ||||||| Sbjct: 35755729 cagtcacttgtttgtacagtcaggcaagatgggcttctcaagctgctgctgttaaagaaa 35755788 Query: 318 ctgaccccagtggcggcaagataagcattgggcccaaatccaagcagatcaaggaggacg 377 |||| |||||| ||||||||||||||||||| |||||||||||||||||||| || | Sbjct: 35755789 ctgaaaatagtggcagcaagataagcattgggccaaaatccaagcagatcaaggaagatg 35755848 Query: 378 acaaggatgatggactggtttatcaaggaccaatatcatcaaccatcaagaaagtgaagc 437 |||| ||||| | || ||||| || ||||| |||||||| ||||| | |||||||||| Sbjct: 35755849 acaaagatgacaggctagtttaccagggacctatatcatcgaccataagaaaagtgaagc 35755908 Query: 438 ttctgtccctgtccacctgctgcctctccgtgtcgctaggccctgtgattacgttcatga 497 |||| || |||||||||||||| ||||| |||||||| ||||||||||| || ||||||| Sbjct: 35755909 ttctttctctgtccacctgctgtctctctgtgtcgcttggccctgtgataacattcatga 35755968 Query: 498 cctcgcccgacatgaatgtgatcctcaagggaggagtcgcatccaccgtgatcttcctca 557 | || || || |||||||| ||||||||||| | || |||||||| || || ||||||| Sbjct: 35755969 catccccagatatgaatgtaatcctcaagggcgctgttgcatccactgtcattttcctca 35756028 Query: 558 gcgccaccacgaccgcagccctgcactggttcgtgagcccgtacatccacaagctgaggt 617 | || ||||| || |||||| | |||||||| |||||||||||||| |||||||| |||| Sbjct: 35756029 gtgctaccacaacggcagccttacactggtttgtgagcccgtacattcacaagctcaggt 35756088 Query: 618 ggcgacagggttcagacagcttcgaggcagagataatgtcgtggctggctacacccctca 677 |||||| |||||||| ||||| || |||||||| ||||| ||||||||||||||||||| Sbjct: 35756089 ggcgaccaggttcagatagctttgaagcagagattatgtcatggctggctacacccctca 35756148 Query: 678 agaagacgatcaagtttgctgacatcaggcccgcagagactaaccggcctttcgtcacct 737 | ||| |||||||||||||| ||||||| ||||||| ||| | ||||| ||||| | Sbjct: 35756149 caaggacaatcaagtttgctgatgtcaggcctccagagaccaacagaccttttgtcactt 35756208 Query: 738 tcagggccgaagggaacttctacttcgtcgacgccgatcacttctccaacaaggccttgc 797 | ||||| |||||||||||||| || || || ||||| |||||| | |||||||| ||| Sbjct: 35756209 ttagggctgaagggaacttctattttgttgatgccgagcacttcccgaacaaggctttgt 35756268 Query: 798 tggagaggctcacccctaagctccctaacgagtctgcgttcaagaacttgtgatggaag 856 ||| |||||| || || |||| |||||| |||||||| |||||||||||||||| |||| Sbjct: 35756269 tggcgaggcttactcccaagcaccctaatgagtctgcattcaagaacttgtgattgaag 35756327 Score = 48.1 bits (24), Expect = 0.061 Identities = 27/28 (96%) Strand = Plus / Plus Query: 60 ccatggcgacggcgaggctgcgatccgc 87 ||||||||||||||||||| |||||||| Sbjct: 35754757 ccatggcgacggcgaggctccgatccgc 35754784
>dbj|AK102872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112B07, full insert sequence Length = 1151 Score = 450 bits (227), Expect = e-123 Identities = 551/659 (83%) Strand = Plus / Plus Query: 198 catggaggcatttctcaacatgcaagcctaatcctcttgcaaaaggggatagctttggct 257 |||||| |||||||||||||| |||||||||||||||| ||||| ||| || |||| | Sbjct: 165 catggaagcatttctcaacattcaagcctaatcctcttccaaaacttgatggccttggtt 224 Query: 258 caatgggttctctgtacagccagacaagatgggcttctcaatccactgctgtcaaagaaa 317 || | || | ||||||| ||| ||||||||||||||||| | ||||||| ||||||| Sbjct: 225 cagtcacttgtttgtacagtcaggcaagatgggcttctcaagctgctgctgttaaagaaa 284 Query: 318 ctgaccccagtggcggcaagataagcattgggcccaaatccaagcagatcaaggaggacg 377 |||| |||||| ||||||||||||||||||| |||||||||||||||||||| || | Sbjct: 285 ctgaaaatagtggcagcaagataagcattgggccaaaatccaagcagatcaaggaagatg 344 Query: 378 acaaggatgatggactggtttatcaaggaccaatatcatcaaccatcaagaaagtgaagc 437 |||| ||||| | || ||||| || ||||| |||||||| ||||| | |||||||||| Sbjct: 345 acaaagatgacaggctagtttaccagggacctatatcatcgaccataagaaaagtgaagc 404 Query: 438 ttctgtccctgtccacctgctgcctctccgtgtcgctaggccctgtgattacgttcatga 497 |||| || |||||||||||||| ||||| |||||||| ||||||||||| || ||||||| Sbjct: 405 ttctttctctgtccacctgctgtctctctgtgtcgcttggccctgtgataacattcatga 464 Query: 498 cctcgcccgacatgaatgtgatcctcaagggaggagtcgcatccaccgtgatcttcctca 557 | || || || |||||||| ||||||||||| | || |||||||| || || ||||||| Sbjct: 465 catccccagatatgaatgtaatcctcaagggcgctgttgcatccactgtcattttcctca 524 Query: 558 gcgccaccacgaccgcagccctgcactggttcgtgagcccgtacatccacaagctgaggt 617 | || ||||| || |||||| | |||||||| |||||||||||||| |||||||| |||| Sbjct: 525 gtgctaccacaacggcagccttacactggtttgtgagcccgtacattcacaagctcaggt 584 Query: 618 ggcgacagggttcagacagcttcgaggcagagataatgtcgtggctggctacacccctca 677 |||||| |||||||| ||||| || |||||||| ||||| ||||||||||||||||||| Sbjct: 585 ggcgaccaggttcagatagctttgaagcagagattatgtcatggctggctacacccctca 644 Query: 678 agaagacgatcaagtttgctgacatcaggcccgcagagactaaccggcctttcgtcacct 737 | ||| |||||||||||||| ||||||| ||||||| ||| | ||||| ||||| | Sbjct: 645 caaggacaatcaagtttgctgatgtcaggcctccagagaccaacagaccttttgtcactt 704 Query: 738 tcagggccgaagggaacttctacttcgtcgacgccgatcacttctccaacaaggccttgc 797 | ||||| |||||||||||||| || || || ||||| |||||| | |||||||| ||| Sbjct: 705 ttagggctgaagggaacttctattttgttgatgccgagcacttcccgaacaaggctttgt 764 Query: 798 tggagaggctcacccctaagctccctaacgagtctgcgttcaagaacttgtgatggaag 856 ||| |||||| || || |||| |||||| |||||||| |||||||||||||||| |||| Sbjct: 765 tggcgaggcttactcccaagcaccctaatgagtctgcattcaagaacttgtgattgaag 823 Score = 48.1 bits (24), Expect = 0.061 Identities = 27/28 (96%) Strand = Plus / Plus Query: 60 ccatggcgacggcgaggctgcgatccgc 87 ||||||||||||||||||| |||||||| Sbjct: 33 ccatggcgacggcgaggctccgatccgc 60
>dbj|AK059849.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-F12, full insert sequence Length = 1123 Score = 450 bits (227), Expect = e-123 Identities = 551/659 (83%) Strand = Plus / Plus Query: 198 catggaggcatttctcaacatgcaagcctaatcctcttgcaaaaggggatagctttggct 257 |||||| |||||||||||||| |||||||||||||||| ||||| ||| || |||| | Sbjct: 164 catggaagcatttctcaacattcaagcctaatcctcttccaaaacttgatggccttggtt 223 Query: 258 caatgggttctctgtacagccagacaagatgggcttctcaatccactgctgtcaaagaaa 317 || | || | ||||||| ||| ||||||||||||||||| | ||||||| ||||||| Sbjct: 224 cagtcacttgtttgtacagtcaggcaagatgggcttctcaagctgctgctgttaaagaaa 283 Query: 318 ctgaccccagtggcggcaagataagcattgggcccaaatccaagcagatcaaggaggacg 377 |||| |||||| ||||||||||||||||||| |||||||||||||||||||| || | Sbjct: 284 ctgaaaatagtggcagcaagataagcattgggccaaaatccaagcagatcaaggaagatg 343 Query: 378 acaaggatgatggactggtttatcaaggaccaatatcatcaaccatcaagaaagtgaagc 437 |||| ||||| | || ||||| || ||||| |||||||| ||||| | |||||||||| Sbjct: 344 acaaagatgacaggctagtttaccagggacctatatcatcgaccataagaaaagtgaagc 403 Query: 438 ttctgtccctgtccacctgctgcctctccgtgtcgctaggccctgtgattacgttcatga 497 |||| || |||||||||||||| ||||| |||||||| ||||||||||| || ||||||| Sbjct: 404 ttctttctctgtccacctgctgtctctctgtgtcgcttggccctgtgataacattcatga 463 Query: 498 cctcgcccgacatgaatgtgatcctcaagggaggagtcgcatccaccgtgatcttcctca 557 | || || || |||||||| ||||||||||| | || |||||||| || || ||||||| Sbjct: 464 catccccagatatgaatgtaatcctcaagggcgctgttgcatccactgtcattttcctca 523 Query: 558 gcgccaccacgaccgcagccctgcactggttcgtgagcccgtacatccacaagctgaggt 617 | || ||||| || |||||| | |||||||| |||||||||||||| |||||||| |||| Sbjct: 524 gtgctaccacaacggcagccttacactggtttgtgagcccgtacattcacaagctcaggt 583 Query: 618 ggcgacagggttcagacagcttcgaggcagagataatgtcgtggctggctacacccctca 677 |||||| |||||||| ||||| || |||||||| ||||| ||||||||||||||||||| Sbjct: 584 ggcgaccaggttcagatagctttgaagcagagattatgtcatggctggctacacccctca 643 Query: 678 agaagacgatcaagtttgctgacatcaggcccgcagagactaaccggcctttcgtcacct 737 | ||| |||||||||||||| ||||||| ||||||| ||| | ||||| ||||| | Sbjct: 644 caaggacaatcaagtttgctgatgtcaggcctccagagaccaacagaccttttgtcactt 703 Query: 738 tcagggccgaagggaacttctacttcgtcgacgccgatcacttctccaacaaggccttgc 797 | ||||| |||||||||||||| || || || ||||| |||||| | |||||||| ||| Sbjct: 704 ttagggctgaagggaacttctattttgttgatgccgagcacttcccgaacaaggctttgt 763 Query: 798 tggagaggctcacccctaagctccctaacgagtctgcgttcaagaacttgtgatggaag 856 ||| |||||| || || |||| |||||| |||||||| |||||||||||||||| |||| Sbjct: 764 tggcgaggcttactcccaagcaccctaatgagtctgcattcaagaacttgtgattgaag 822 Score = 48.1 bits (24), Expect = 0.061 Identities = 27/28 (96%) Strand = Plus / Plus Query: 60 ccatggcgacggcgaggctgcgatccgc 87 ||||||||||||||||||| |||||||| Sbjct: 32 ccatggcgacggcgaggctccgatccgc 59
>ref|NM_001058467.1| Oryza sativa (japonica cultivar-group) Os03g0853800 (Os03g0853800) mRNA, complete cds Length = 1079 Score = 357 bits (180), Expect = 5e-95 Identities = 423/504 (83%) Strand = Plus / Plus Query: 353 aaatccaagcagatcaaggaggacgacaaggatgatggactggtttatcaaggaccaata 412 |||||||||||||||||||| || ||||| ||||| | || ||||| || ||||| ||| Sbjct: 205 aaatccaagcagatcaaggaagatgacaaagatgacaggctagtttaccagggacctata 264 Query: 413 tcatcaaccatcaagaaagtgaagcttctgtccctgtccacctgctgcctctccgtgtcg 472 ||||| ||||| | |||||||||||||| || |||||||||||||| ||||| |||||| Sbjct: 265 tcatcgaccataagaaaagtgaagcttctttctctgtccacctgctgtctctctgtgtcg 324 Query: 473 ctaggccctgtgattacgttcatgacctcgcccgacatgaatgtgatcctcaagggagga 532 || ||||||||||| || |||||||| || || || |||||||| ||||||||||| | Sbjct: 325 cttggccctgtgataacattcatgacatccccagatatgaatgtaatcctcaagggcgct 384 Query: 533 gtcgcatccaccgtgatcttcctcagcgccaccacgaccgcagccctgcactggttcgtg 592 || |||||||| || || |||||||| || ||||| || |||||| | |||||||| ||| Sbjct: 385 gttgcatccactgtcattttcctcagtgctaccacaacggcagccttacactggtttgtg 444 Query: 593 agcccgtacatccacaagctgaggtggcgacagggttcagacagcttcgaggcagagata 652 ||||||||||| |||||||| |||||||||| |||||||| ||||| || |||||||| Sbjct: 445 agcccgtacattcacaagctcaggtggcgaccaggttcagatagctttgaagcagagatt 504 Query: 653 atgtcgtggctggctacacccctcaagaagacgatcaagtttgctgacatcaggcccgca 712 ||||| ||||||||||||||||||| | ||| |||||||||||||| ||||||| || Sbjct: 505 atgtcatggctggctacacccctcacaaggacaatcaagtttgctgatgtcaggcctcca 564 Query: 713 gagactaaccggcctttcgtcaccttcagggccgaagggaacttctacttcgtcgacgcc 772 ||||| ||| | ||||| ||||| || ||||| |||||||||||||| || || || ||| Sbjct: 565 gagaccaacagaccttttgtcacttttagggctgaagggaacttctattttgttgatgcc 624 Query: 773 gatcacttctccaacaaggccttgctggagaggctcacccctaagctccctaacgagtct 832 || |||||| | |||||||| ||| ||| |||||| || || |||| |||||| |||||| Sbjct: 625 gagcacttcccgaacaaggctttgttggcgaggcttactcccaagcaccctaatgagtct 684 Query: 833 gcgttcaagaacttgtgatggaag 856 || |||||||||||||||| |||| Sbjct: 685 gcattcaagaacttgtgattgaag 708 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 198 catggaggcatttctcaacatgcaagcctaatcctcttgcaaaa 241 |||||| |||||||||||||| |||||||||||||||| ||||| Sbjct: 164 catggaagcatttctcaacattcaagcctaatcctcttccaaaa 207 Score = 48.1 bits (24), Expect = 0.061 Identities = 27/28 (96%) Strand = Plus / Plus Query: 60 ccatggcgacggcgaggctgcgatccgc 87 ||||||||||||||||||| |||||||| Sbjct: 32 ccatggcgacggcgaggctccgatccgc 59
>dbj|AK120043.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-F05, full insert sequence Length = 1079 Score = 357 bits (180), Expect = 5e-95 Identities = 423/504 (83%) Strand = Plus / Plus Query: 353 aaatccaagcagatcaaggaggacgacaaggatgatggactggtttatcaaggaccaata 412 |||||||||||||||||||| || ||||| ||||| | || ||||| || ||||| ||| Sbjct: 205 aaatccaagcagatcaaggaagatgacaaagatgacaggctagtttaccagggacctata 264 Query: 413 tcatcaaccatcaagaaagtgaagcttctgtccctgtccacctgctgcctctccgtgtcg 472 ||||| ||||| | |||||||||||||| || |||||||||||||| ||||| |||||| Sbjct: 265 tcatcgaccataagaaaagtgaagcttctttctctgtccacctgctgtctctctgtgtcg 324 Query: 473 ctaggccctgtgattacgttcatgacctcgcccgacatgaatgtgatcctcaagggagga 532 || ||||||||||| || |||||||| || || || |||||||| ||||||||||| | Sbjct: 325 cttggccctgtgataacattcatgacatccccagatatgaatgtaatcctcaagggcgct 384 Query: 533 gtcgcatccaccgtgatcttcctcagcgccaccacgaccgcagccctgcactggttcgtg 592 || |||||||| || || |||||||| || ||||| || |||||| | |||||||| ||| Sbjct: 385 gttgcatccactgtcattttcctcagtgctaccacaacggcagccttacactggtttgtg 444 Query: 593 agcccgtacatccacaagctgaggtggcgacagggttcagacagcttcgaggcagagata 652 ||||||||||| |||||||| |||||||||| |||||||| ||||| || |||||||| Sbjct: 445 agcccgtacattcacaagctcaggtggcgaccaggttcagatagctttgaagcagagatt 504 Query: 653 atgtcgtggctggctacacccctcaagaagacgatcaagtttgctgacatcaggcccgca 712 ||||| ||||||||||||||||||| | ||| |||||||||||||| ||||||| || Sbjct: 505 atgtcatggctggctacacccctcacaaggacaatcaagtttgctgatgtcaggcctcca 564 Query: 713 gagactaaccggcctttcgtcaccttcagggccgaagggaacttctacttcgtcgacgcc 772 ||||| ||| | ||||| ||||| || ||||| |||||||||||||| || || || ||| Sbjct: 565 gagaccaacagaccttttgtcacttttagggctgaagggaacttctattttgttgatgcc 624 Query: 773 gatcacttctccaacaaggccttgctggagaggctcacccctaagctccctaacgagtct 832 || |||||| | |||||||| ||| ||| |||||| || || |||| |||||| |||||| Sbjct: 625 gagcacttcccgaacaaggctttgttggcgaggcttactcccaagcaccctaatgagtct 684 Query: 833 gcgttcaagaacttgtgatggaag 856 || |||||||||||||||| |||| Sbjct: 685 gcattcaagaacttgtgattgaag 708 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 198 catggaggcatttctcaacatgcaagcctaatcctcttgcaaaa 241 |||||| |||||||||||||| |||||||||||||||| ||||| Sbjct: 164 catggaagcatttctcaacattcaagcctaatcctcttccaaaa 207 Score = 48.1 bits (24), Expect = 0.061 Identities = 27/28 (96%) Strand = Plus / Plus Query: 60 ccatggcgacggcgaggctgcgatccgc 87 ||||||||||||||||||| |||||||| Sbjct: 32 ccatggcgacggcgaggctccgatccgc 59
>gb|DQ244732.1| Zea mays clone 10326 mRNA sequence Length = 1170 Score = 329 bits (166), Expect = 1e-86 Identities = 456/552 (82%), Gaps = 3/552 (0%) Strand = Plus / Plus Query: 303 ctgctgtcaaagaaactgaccccagtggcggcaagataagcattgggcccaaatccaagc 362 ||||||| |||||||| || ||||| || ||||||||||||| ||||||||| | || | Sbjct: 323 ctgctgtgaaagaaaccgaatccagtagcagcaagataagcatcgggcccaaaccaaaac 382 Query: 363 agatcaaggaggacgacaaggatgatggactggtttatcaaggaccaatatcatcaacca 422 ||||||||||||| ||| |||||| | ||||| || ||||| ||||||||||| |||| Sbjct: 383 agatcaaggaggatgacgaggatgctaacctggtataccaagggccaatatcatcgacca 442 Query: 423 tcaagaaagtgaagcttctgtccctgtccacctgctgcctctccgtgtcgctaggccctg 482 | ||||||||||||||||| ||||||||||||||||||||||||||||| || || || | Sbjct: 443 taaagaaagtgaagcttctctccctgtccacctgctgcctctccgtgtctctggggccag 502 Query: 483 tgattacgttcatgacctcgcccgacatgaatgtgatcctcaagggaggagtcgcatcca 542 |||| || |||||||| ||||| ||||||||||||||||||||||||| || ||||||| Sbjct: 503 tgataacattcatgacttcgcctgacatgaatgtgatcctcaagggagcggttgcatcca 562 Query: 543 ccgtgatcttcctcagcgccaccacgaccgcagccctgcactggttcgtgagcccgtaca 602 |||| || |||||||||||||| || || ||||| | || ||||||||||||||||||| Sbjct: 563 ccgtcattttcctcagcgccactaccactgcagcgttacattggttcgtgagcccgtaca 622 Query: 603 tccacaagctgaggtggcgacagggttcagacagcttcgaggcagagataatgtcgtggc 662 | |||||||| ||||||| | ||||| || ||||| ||||| ||| | ||| | |||| Sbjct: 623 ttcacaagctccggtggcgtcctggttcggatagctttgaggccgaggtgatgacatggc 682 Query: 663 tggctacacccctcaagaagacgatcaagtttgctgacatcaggcccgcagagactaacc 722 | ||||| |||||||| | ||| |||||||||| || ||||||| | || || ||| Sbjct: 683 tagctactcccctcaaaaggactgtcaagtttgccgatgtcaggcctcccgaaacaaaca 742 Query: 723 ggcctttcgtcaccttcagggccgaagggaacttctacttcgtcgacgccgatcacttct 782 |||| || |||||||| | ||| || |||||||| ||||| ||||| || || ||||||| Sbjct: 743 ggccctttgtcacctttaaggctgaggggaacttttactttgtcgatgctgaccacttct 802 Query: 783 ccaacaaggccttgctggagaggctcacccc---taagctccctaacgagtctgcgttca 839 | |||||||| ||| ||| ||||| || || ||||| ||| | ||||||||||||| Sbjct: 803 cgaacaaggcattgttggctaggctaacgccgcagaagcttcctcatgagtctgcgttca 862 Query: 840 agaacttgtgat 851 |||||||||||| Sbjct: 863 agaacttgtgat 874 Score = 44.1 bits (22), Expect = 0.96 Identities = 25/26 (96%) Strand = Plus / Plus Query: 60 ccatggcgacggcgaggctgcgatcc 85 ||||||||||||||||||| |||||| Sbjct: 86 ccatggcgacggcgaggctccgatcc 111
>dbj|AK058371.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-G06, full insert sequence Length = 361 Score = 145 bits (73), Expect = 4e-31 Identities = 178/213 (83%) Strand = Plus / Plus Query: 644 gcagagataatgtcgtggctggctacacccctcaagaagacgatcaagtttgctgacatc 703 |||||||| ||||| ||||||||||||||||||| | ||| |||||||||||||| || Sbjct: 2 gcagagattatgtcatggctggctacacccctcacaaggacaatcaagtttgctgatgtc 61 Query: 704 aggcccgcagagactaaccggcctttcgtcaccttcagggccgaagggaacttctacttc 763 ||||| ||||||| ||| | ||||| ||||| || ||||| |||||||||||||| || Sbjct: 62 aggcctccagagaccaacagaccttttgtcacttttagggctgaagggaacttctatttt 121 Query: 764 gtcgacgccgatcacttctccaacaaggccttgctggagaggctcacccctaagctccct 823 || || ||||| |||||| | |||||||| ||| ||| |||||| || | |||| |||| Sbjct: 122 gttgatgccgagcacttcccgaacaaggctttgttggcgaggcttactctcaagcaccct 181 Query: 824 aacgagtctgcgttcaagaacttgtgatggaag 856 || |||||||| |||||||||||||||| |||| Sbjct: 182 aatgagtctgcattcaagaacttgtgattgaag 214
>ref|NM_129137.2| Arabidopsis thaliana unknown protein (AT2G35790) mRNA, complete cds Length = 919 Score = 58.0 bits (29), Expect = 6e-05 Identities = 170/217 (78%) Strand = Plus / Plus Query: 404 ggaccaatatcatcaaccatcaagaaagtgaagcttctgtccctgtccacctgctgcctc 463 |||||||| ||||||||||| ||||||||||| || || || || ||||| ||||| || Sbjct: 324 ggaccaatctcatcaaccataaagaaagtgaaactcctctcactctccacttgctgtcta 383 Query: 464 tccgtgtcgctaggccctgtgattacgttcatgacctcgcccgacatgaatgtgatcctc 523 || || || || ||||| || || || |||||||| || || | ||||||||||| | Sbjct: 384 tcagtctctcttggcccggtcatcactttcatgacttccccgggactgaatgtgatcatg 443 Query: 524 aagggaggagtcgcatccaccgtgatcttcctcagcgccaccacgaccgcagccctgcac 583 || || | || || || || ||||||||||| ||||| |||| ||||| || || ||| Sbjct: 444 aaaggtgctgttgcctctactgtgatcttccttagcgcatccacaaccgctgctctccac 503 Query: 584 tggttcgtgagcccgtacatccacaagctgaggtggc 620 ||||| || || || ||| | |||||||||||||||| Sbjct: 504 tggtttgttagtccctacgtgcacaagctgaggtggc 540
>gb|AC007017.4| Arabidopsis thaliana chromosome 2 clone F11F19 map g6825, complete sequence Length = 120938 Score = 58.0 bits (29), Expect = 6e-05 Identities = 170/217 (78%) Strand = Plus / Minus Query: 404 ggaccaatatcatcaaccatcaagaaagtgaagcttctgtccctgtccacctgctgcctc 463 |||||||| ||||||||||| ||||||||||| || || || || ||||| ||||| || Sbjct: 115501 ggaccaatctcatcaaccataaagaaagtgaaactcctctcactctccacttgctgtcta 115442 Query: 464 tccgtgtcgctaggccctgtgattacgttcatgacctcgcccgacatgaatgtgatcctc 523 || || || || ||||| || || || |||||||| || || | ||||||||||| | Sbjct: 115441 tcagtctctcttggcccggtcatcactttcatgacttccccgggactgaatgtgatcatg 115382 Query: 524 aagggaggagtcgcatccaccgtgatcttcctcagcgccaccacgaccgcagccctgcac 583 || || | || || || || ||||||||||| ||||| |||| ||||| || || ||| Sbjct: 115381 aaaggtgctgttgcctctactgtgatcttccttagcgcatccacaaccgctgctctccac 115322 Query: 584 tggttcgtgagcccgtacatccacaagctgaggtggc 620 ||||| || || || ||| | |||||||||||||||| Sbjct: 115321 tggtttgttagtccctacgtgcacaagctgaggtggc 115285
>gb|AC006068.4| Arabidopsis thaliana chromosome 2 clone T20F21 map ve016, complete sequence Length = 107436 Score = 58.0 bits (29), Expect = 6e-05 Identities = 170/217 (78%) Strand = Plus / Minus Query: 404 ggaccaatatcatcaaccatcaagaaagtgaagcttctgtccctgtccacctgctgcctc 463 |||||||| ||||||||||| ||||||||||| || || || || ||||| ||||| || Sbjct: 2610 ggaccaatctcatcaaccataaagaaagtgaaactcctctcactctccacttgctgtcta 2551 Query: 464 tccgtgtcgctaggccctgtgattacgttcatgacctcgcccgacatgaatgtgatcctc 523 || || || || ||||| || || || |||||||| || || | ||||||||||| | Sbjct: 2550 tcagtctctcttggcccggtcatcactttcatgacttccccgggactgaatgtgatcatg 2491 Query: 524 aagggaggagtcgcatccaccgtgatcttcctcagcgccaccacgaccgcagccctgcac 583 || || | || || || || ||||||||||| ||||| |||| ||||| || || ||| Sbjct: 2490 aaaggtgctgttgcctctactgtgatcttccttagcgcatccacaaccgctgctctccac 2431 Query: 584 tggttcgtgagcccgtacatccacaagctgaggtggc 620 ||||| || || || ||| | |||||||||||||||| Sbjct: 2430 tggtttgttagtccctacgtgcacaagctgaggtggc 2394
>gb|AY072456.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 820 Score = 58.0 bits (29), Expect = 6e-05 Identities = 170/217 (78%) Strand = Plus / Plus Query: 404 ggaccaatatcatcaaccatcaagaaagtgaagcttctgtccctgtccacctgctgcctc 463 |||||||| ||||||||||| ||||||||||| || || || || ||||| ||||| || Sbjct: 268 ggaccaatctcatcaaccataaagaaagtgaaactcctctcactctccacttgctgtcta 327 Query: 464 tccgtgtcgctaggccctgtgattacgttcatgacctcgcccgacatgaatgtgatcctc 523 || || || || ||||| || || || |||||||| || || | ||||||||||| | Sbjct: 328 tcagtctctcttggcccggtcatcactttcatgacttccccgggactgaatgtgatcatg 387 Query: 524 aagggaggagtcgcatccaccgtgatcttcctcagcgccaccacgaccgcagccctgcac 583 || || | || || || || ||||||||||| ||||| |||| ||||| || || ||| Sbjct: 388 aaaggtgctgttgcctctactgtgatcttccttagcgcatccacaaccgctgctctccac 447 Query: 584 tggttcgtgagcccgtacatccacaagctgaggtggc 620 ||||| || || || ||| | |||||||||||||||| Sbjct: 448 tggtttgttagtccctacgtgcacaagctgaggtggc 484
>gb|AY042895.1| Arabidopsis thaliana Unknown protein (At2g35790) mRNA, complete cds Length = 920 Score = 58.0 bits (29), Expect = 6e-05 Identities = 170/217 (78%) Strand = Plus / Plus Query: 404 ggaccaatatcatcaaccatcaagaaagtgaagcttctgtccctgtccacctgctgcctc 463 |||||||| ||||||||||| ||||||||||| || || || || ||||| ||||| || Sbjct: 324 ggaccaatctcatcaaccataaagaaagtgaaactcctctcactctccacttgctgtcta 383 Query: 464 tccgtgtcgctaggccctgtgattacgttcatgacctcgcccgacatgaatgtgatcctc 523 || || || || ||||| || || || |||||||| || || | ||||||||||| | Sbjct: 384 tcagtctctcttggcccggtcatcactttcatgacttccccgggactgaatgtgatcatg 443 Query: 524 aagggaggagtcgcatccaccgtgatcttcctcagcgccaccacgaccgcagccctgcac 583 || || | || || || || ||||||||||| ||||| |||| ||||| || || ||| Sbjct: 444 aaaggtgctgttgcctctactgtgatcttccttagcgcatccacaaccgctgctctccac 503 Query: 584 tggttcgtgagcccgtacatccacaagctgaggtggc 620 ||||| || || || ||| | |||||||||||||||| Sbjct: 504 tggtttgttagtccctacgtgcacaagctgaggtggc 540
>emb|BX821872.1|CNS0AA4I Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL80ZF03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 857 Score = 46.1 bits (23), Expect = 0.24 Identities = 29/31 (93%) Strand = Plus / Plus Query: 404 ggaccaatatcatcaaccatcaagaaagtga 434 |||||||| ||||||||||| |||||||||| Sbjct: 260 ggaccaatctcatcaaccataaagaaagtga 290
>ref|XM_001228026.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_10100) mRNA, complete cds Length = 1215 Score = 44.1 bits (22), Expect = 0.96 Identities = 22/22 (100%) Strand = Plus / Minus Query: 13 ctccttggcctgctccgcgtcg 34 |||||||||||||||||||||| Sbjct: 642 ctccttggcctgctccgcgtcg 621
>ref|XM_380454.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00278.1) partial mRNA Length = 1311 Score = 44.1 bits (22), Expect = 0.96 Identities = 22/22 (100%) Strand = Plus / Minus Query: 13 ctccttggcctgctccgcgtcg 34 |||||||||||||||||||||| Sbjct: 744 ctccttggcctgctccgcgtcg 723
>gb|AC008529.4|AC008529 Homo sapiens chromosome 5 clone CTC-475P15, complete sequence Length = 169557 Score = 44.1 bits (22), Expect = 0.96 Identities = 22/22 (100%) Strand = Plus / Plus Query: 686 atcaagtttgctgacatcaggc 707 |||||||||||||||||||||| Sbjct: 71033 atcaagtttgctgacatcaggc 71054
>emb|AL670305.7| Mouse DNA sequence from clone RP23-225G17 on chromosome X, complete sequence Length = 172171 Score = 44.1 bits (22), Expect = 0.96 Identities = 28/30 (93%) Strand = Plus / Minus Query: 401 caaggaccaatatcatcaaccatcaagaaa 430 |||||| ||||||||| ||||||||||||| Sbjct: 169354 caaggatcaatatcattaaccatcaagaaa 169325
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 cctcttgcaaaaggggatagc 250 ||||||||||||||||||||| Sbjct: 2130783 cctcttgcaaaaggggatagc 2130803
>gb|AC105269.2| Homo sapiens chromosome 1 clone RP4-788P17, complete sequence Length = 120910 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 687 tcaagtttgctgacatcaggc 707 ||||||||||||||||||||| Sbjct: 84100 tcaagtttgctgacatcaggc 84120
>emb|AL591463.7| Human DNA sequence from clone RP11-275A6 on chromosome 1 Contains the 3' end of a novel gene and a novel gene, complete sequence Length = 186710 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 687 tcaagtttgctgacatcaggc 707 ||||||||||||||||||||| Sbjct: 33242 tcaagtttgctgacatcaggc 33262
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 490 gttcatgacctcgcccgacat 510 ||||||||||||||||||||| Sbjct: 2618924 gttcatgacctcgcccgacat 2618904
>dbj|AP000732.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:F21A17 Length = 64714 Score = 42.1 bits (21), Expect = 3.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 231 ctcttgcaaaaggggatagct 251 ||||||||||||||||||||| Sbjct: 1388 ctcttgcaaaaggggatagct 1408 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 149,600,342 Number of extensions: 7960806 Number of successful extensions: 164175 Number of sequences better than 10.0: 24 Number of HSP's gapped: 164170 Number of HSP's successfully gapped: 45 Length of query: 1001 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 978 Effective length of database: 18,503,978,556 Effective search space: 18096891027768 Effective search space used: 18096891027768 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)