ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf144o02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC010295.7| Homo sapiens chromosome 5 clone CTB-143H13, compl... 52 0.010
2ref|XM_001139311.1| PREDICTED: Pan troglodytes synovial sarcoma,... 46 0.60
3ref|XM_001139394.1| PREDICTED: Pan troglodytes synovial sarcoma,... 46 0.60
4ref|XM_001139717.1| PREDICTED: Pan troglodytes synovial sarcoma,... 46 0.60
5ref|XM_001139633.1| PREDICTED: Pan troglodytes synovial sarcoma,... 46 0.60
6ref|XM_001139549.1| PREDICTED: Pan troglodytes synovial sarcoma,... 46 0.60
7ref|XM_001139479.1| PREDICTED: Pan troglodytes synovial sarcoma,... 46 0.60
8ref|XM_001107436.1| PREDICTED: Macaca mulatta synovial sarcoma, ... 46 0.60
9ref|XM_001107616.1| PREDICTED: Macaca mulatta synovial sarcoma, ... 46 0.60
10ref|XM_001107555.1| PREDICTED: Macaca mulatta synovial sarcoma, ... 46 0.60
11ref|XM_001107793.1| PREDICTED: Macaca mulatta synovial sarcoma, ... 46 0.60
12ref|XM_001107733.1| PREDICTED: Macaca mulatta synovial sarcoma, ... 46 0.60
13ref|XM_001107676.1| PREDICTED: Macaca mulatta synovial sarcoma, ... 46 0.60
14gb|AC186394.1| Pan troglodytes chromosome 7 clone CH251-302F10, ... 46 0.60
15ref|XM_455118.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F00858g ... 46 0.60
16emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 46 0.60
17emb|AL663091.13| Mouse DNA sequence from clone RP23-392P11 on ch... 46 0.60
18emb|CR855275.7| Zebrafish DNA sequence from clone DKEY-4M3 in li... 44 2.4
19emb|CR759741.10| Zebrafish DNA sequence from clone CH211-278A17 ... 44 2.4
20gb|AC119996.7| Mus musculus chromosome 19, clone RP24-120D1, com... 44 2.4
21dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 2.4
22emb|AL365226.9| Human DNA sequence from clone RP11-462G2 on chro... 44 2.4
23dbj|AP005091.3| Oryza sativa (japonica cultivar-group) genomic D... 44 2.4
24dbj|AP005704.2| Oryza sativa (japonica cultivar-group) genomic D... 44 2.4
25ref|XM_414878.2| PREDICTED: Gallus gallus similar to gamma-adapt... 42 9.3
26gb|AC155976.2| Xenopus tropicalis clone CH216-54H11, complete se... 42 9.3
27gb|AC189009.3| Gallus gallus BAC clone CH261-51H3 from chromosom... 42 9.3
28ref|NM_001068617.1| Oryza sativa (japonica cultivar-group) Os08g... 42 9.3
29ref|NM_001052477.1| Oryza sativa (japonica cultivar-group) Os02g... 42 9.3
30gb|CP000383.1| Cytophaga hutchinsonii ATCC 33406, complete genome 42 9.3
31ref|XM_001068417.1| PREDICTED: Rattus norvegicus similar to fibr... 42 9.3
32ref|XR_005709.1| PREDICTED: Rattus norvegicus similar to FLJ4404... 42 9.3
33gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome 42 9.3
34gb|AF196779.2| Homo sapiens chromosome X multiple clones map p11... 42 9.3
35gb|AF235097.2| Homo sapiens chromosome X multiple clones map p11... 42 9.3
36ref|XM_705489.1| Candida albicans SC5314 endoplasmic reticulum m... 42 9.3
37ref|XM_705479.1| Candida albicans SC5314 endoplasmic reticulum m... 42 9.3
38gb|AC148474.1| Pan troglodytes fosmid clone CH1251-1322F5 from Y... 42 9.3
39gb|AC149133.1| Pan troglodytes chromosome X clone RP43-010O16 ma... 42 9.3
40dbj|AK048133.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 42 9.3
41dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 9.3
42dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 9.3
43dbj|BS000652.2| Pan troglodytes chromosome Y clone: PTBY-013L08,... 42 9.3
44gb|AC154779.3| Mus musculus BAC clone RP24-461H19 from chromosom... 42 9.3
45emb|AL133231.15| Human DNA sequence from clone RP5-867F11 on chr... 42 9.3
46emb|AL133474.9| Human DNA sequence from clone RP1-239I6 on chrom... 42 9.3
47emb|AL935261.1| Lactobacillus plantarum strain WCFS1 complete ge... 42 9.3
48emb|AJ006216.1|HSA6216 Homo sapiens CACNA1F gene, exons 1 to 48 42 9.3
49emb|AL663108.4| Mouse DNA sequence from clone RP23-19H23 on chro... 42 9.3
50dbj|BS000631.2| Pan troglodytes chromosome Y clone: PTB-395F06, ... 42 9.3
51dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 9.3
52gb|AC006999.2|AC006999 Homo sapiens BAC clone RP11-462A19 from Y... 42 9.3
53dbj|AP004871.3| Oryza sativa (japonica cultivar-group) genomic D... 42 9.3
54dbj|AP005918.3| Oryza sativa (japonica cultivar-group) genomic D... 42 9.3
55gb|AF217202.1|AF217202 Filobasidiella neoformans plasma membrane... 42 9.3
56gb|AF217201.1|AF217201 Filobasidiella neoformans plasma membrane... 42 9.3
57dbj|AK106196.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 9.3
58dbj|AK100447.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 9.3
59dbj|AK070359.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 9.3
60emb|AL929560.14| Zebrafish DNA sequence from clone CH211-241O15 ... 42 9.3
61gb|AC103378.21| Mus musculus chromosome 8, clone RP24-231N10, co... 42 9.3
62emb|CR352220.19| Zebrafish DNA sequence from clone DKEY-148F10 i... 42 9.3
63gb|AF025480.1|AF025480 Bison bison Na-Ca+K exchanger (BISNCKX) m... 42 9.3
64gb|U93305.1|HSU93305 Homo sapiens A4 differentiation-dependent p... 42 9.3
65emb|AL844168.5| Mouse DNA sequence from clone RP23-413G9 on chro... 42 9.3 
>gb|AC010295.7| Homo sapiens chromosome 5 clone CTB-143H13, complete sequence
          Length = 108051
 Score = 52.0 bits (26), Expect = 0.010
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                               
Query: 1387  aataaacaagaatatttctgatatcactaaaagc 1420
             |||||||||||||||||| ||||||| |||||||
Sbjct: 46174 aataaacaagaatatttcagatatcagtaaaagc 46141
to top
>ref|XM_001139311.1| PREDICTED: Pan troglodytes synovial sarcoma, X breakpoint 2
            interacting protein, transcript variant 1 (SSX2IP), mRNA
          Length = 6745

 Score = 46.1 bits (23), Expect = 0.60
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 1026 agacaacaaaagtacctttgaat 1048
            |||||||||||||||||||||||
Sbjct: 3510 agacaacaaaagtacctttgaat 3532
to top
>ref|XM_001139394.1| PREDICTED: Pan troglodytes synovial sarcoma, X breakpoint 2
            interacting protein, transcript variant 2 (SSX2IP), mRNA
          Length = 6031

 Score = 46.1 bits (23), Expect = 0.60
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 1026 agacaacaaaagtacctttgaat 1048
            |||||||||||||||||||||||
Sbjct: 2796 agacaacaaaagtacctttgaat 2818
to top
>ref|XM_001139717.1| PREDICTED: Pan troglodytes synovial sarcoma, X breakpoint 2
            interacting protein, transcript variant 6 (SSX2IP), mRNA
          Length = 6149

 Score = 46.1 bits (23), Expect = 0.60
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 1026 agacaacaaaagtacctttgaat 1048
            |||||||||||||||||||||||
Sbjct: 2914 agacaacaaaagtacctttgaat 2936
to top
>ref|XM_001139633.1| PREDICTED: Pan troglodytes synovial sarcoma, X breakpoint 2
            interacting protein, transcript variant 5 (SSX2IP), mRNA
          Length = 6162

 Score = 46.1 bits (23), Expect = 0.60
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 1026 agacaacaaaagtacctttgaat 1048
            |||||||||||||||||||||||
Sbjct: 2927 agacaacaaaagtacctttgaat 2949
to top
>ref|XM_001139549.1| PREDICTED: Pan troglodytes synovial sarcoma, X breakpoint 2
            interacting protein, transcript variant 4 (SSX2IP), mRNA
          Length = 6115

 Score = 46.1 bits (23), Expect = 0.60
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 1026 agacaacaaaagtacctttgaat 1048
            |||||||||||||||||||||||
Sbjct: 2880 agacaacaaaagtacctttgaat 2902
to top
>ref|XM_001139479.1| PREDICTED: Pan troglodytes synovial sarcoma, X breakpoint 2
            interacting protein, transcript variant 3 (SSX2IP), mRNA
          Length = 6049

 Score = 46.1 bits (23), Expect = 0.60
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 1026 agacaacaaaagtacctttgaat 1048
            |||||||||||||||||||||||
Sbjct: 2814 agacaacaaaagtacctttgaat 2836
to top
>ref|XM_001107436.1| PREDICTED: Macaca mulatta synovial sarcoma, X breakpoint 2
            interacting protein, transcript variant 1 (SSX2IP), mRNA
          Length = 6757

 Score = 46.1 bits (23), Expect = 0.60
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 1026 agacaacaaaagtacctttgaat 1048
            |||||||||||||||||||||||
Sbjct: 3510 agacaacaaaagtacctttgaat 3532
to top
>ref|XM_001107616.1| PREDICTED: Macaca mulatta synovial sarcoma, X breakpoint 2
            interacting protein, transcript variant 3 (SSX2IP), mRNA
          Length = 5937

 Score = 46.1 bits (23), Expect = 0.60
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 1026 agacaacaaaagtacctttgaat 1048
            |||||||||||||||||||||||
Sbjct: 2690 agacaacaaaagtacctttgaat 2712
to top
>ref|XM_001107555.1| PREDICTED: Macaca mulatta synovial sarcoma, X breakpoint 2
            interacting protein, transcript variant 2 (SSX2IP), mRNA
          Length = 6156

 Score = 46.1 bits (23), Expect = 0.60
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 1026 agacaacaaaagtacctttgaat 1048
            |||||||||||||||||||||||
Sbjct: 2909 agacaacaaaagtacctttgaat 2931
to top
>ref|XM_001107793.1| PREDICTED: Macaca mulatta synovial sarcoma, X breakpoint 2
            interacting protein, transcript variant 6 (SSX2IP), mRNA
          Length = 6159

 Score = 46.1 bits (23), Expect = 0.60
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 1026 agacaacaaaagtacctttgaat 1048
            |||||||||||||||||||||||
Sbjct: 2912 agacaacaaaagtacctttgaat 2934
to top
>ref|XM_001107733.1| PREDICTED: Macaca mulatta synovial sarcoma, X breakpoint 2
            interacting protein, transcript variant 5 (SSX2IP), mRNA
          Length = 6157

 Score = 46.1 bits (23), Expect = 0.60
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 1026 agacaacaaaagtacctttgaat 1048
            |||||||||||||||||||||||
Sbjct: 2910 agacaacaaaagtacctttgaat 2932
to top
>ref|XM_001107676.1| PREDICTED: Macaca mulatta synovial sarcoma, X breakpoint 2
            interacting protein, transcript variant 4 (SSX2IP), mRNA
          Length = 6091

 Score = 46.1 bits (23), Expect = 0.60
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 1026 agacaacaaaagtacctttgaat 1048
            |||||||||||||||||||||||
Sbjct: 2844 agacaacaaaagtacctttgaat 2866
to top
>gb|AC186394.1| Pan troglodytes chromosome 7 clone CH251-302F10, complete sequence
          Length = 183782

 Score = 46.1 bits (23), Expect = 0.60
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 1026  agacaacaaaagtacctttgaat 1048
             |||||||||||||||||||||||
Sbjct: 77169 agacaacaaaagtacctttgaat 77191
to top
>ref|XM_455118.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F00858g predicted mRNA
          Length = 2148

 Score = 46.1 bits (23), Expect = 0.60
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 1929 ttgatatcatgcaaggagaaata 1951
            |||||||||||||||||||||||
Sbjct: 866  ttgatatcatgcaaggagaaata 844
to top
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL
             Y-1140 of Kluyveromyces lactis
          Length = 2602197

 Score = 46.1 bits (23), Expect = 0.60
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 1929  ttgatatcatgcaaggagaaata 1951
             |||||||||||||||||||||||
Sbjct: 79801 ttgatatcatgcaaggagaaata 79823
to top
>emb|AL663091.13| Mouse DNA sequence from clone RP23-392P11 on chromosome 2, complete
             sequence
          Length = 196078

 Score = 46.1 bits (23), Expect = 0.60
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 2355  tgctttgtaaatatacatatatg 2377
             |||||||||||||||||||||||
Sbjct: 29793 tgctttgtaaatatacatatatg 29815
to top
>emb|CR855275.7| Zebrafish DNA sequence from clone DKEY-4M3 in linkage group 25, complete
              sequence
          Length = 159960

 Score = 44.1 bits (22), Expect = 2.4
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 1152   cctttcaagaaaagggtgattc 1173
              ||||||||||||||||||||||
Sbjct: 158825 cctttcaagaaaagggtgattc 158846
to top
>emb|CR759741.10| Zebrafish DNA sequence from clone CH211-278A17 in linkage group 25,
            complete sequence
          Length = 165845

 Score = 44.1 bits (22), Expect = 2.4
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 1152 cctttcaagaaaagggtgattc 1173
            ||||||||||||||||||||||
Sbjct: 865  cctttcaagaaaagggtgattc 886
to top
>gb|AC119996.7| Mus musculus chromosome 19, clone RP24-120D1, complete sequence
          Length = 172160

 Score = 44.1 bits (22), Expect = 2.4
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 1442  tatgaatcaacaatcatgaaaa 1463
             ||||||||||||||||||||||
Sbjct: 30512 tatgaatcaacaatcatgaaaa 30491
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9
          Length = 22696651

 Score = 44.1 bits (22), Expect = 2.4
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 1446     aatcaacaatcatgaaaatgaa 1467
                ||||||||||||||||||||||
Sbjct: 10422101 aatcaacaatcatgaaaatgaa 10422122
to top
>emb|AL365226.9| Human DNA sequence from clone RP11-462G2 on chromosome 6 Contains two
             novel genes, the 5' end of a novel gene (KIAA1411)  and a
             CpG island, complete sequence
          Length = 62327

 Score = 44.1 bits (22), Expect = 2.4
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 802   aaaggaagacaaacaaacatcaaaga 827
             |||||||||||||||||||| |||||
Sbjct: 44396 aaaggaagacaaacaaacataaaaga 44371
to top
>dbj|AP005091.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1104_G11
          Length = 140093

 Score = 44.1 bits (22), Expect = 2.4
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 1446   aatcaacaatcatgaaaatgaa 1467
              ||||||||||||||||||||||
Sbjct: 129806 aatcaacaatcatgaaaatgaa 129827
to top
>dbj|AP005704.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0448B03
          Length = 147748

 Score = 44.1 bits (22), Expect = 2.4
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1446  aatcaacaatcatgaaaatgaa 1467
             ||||||||||||||||||||||
Sbjct: 22480 aatcaacaatcatgaaaatgaa 22501
to top
>ref|XM_414878.2| PREDICTED: Gallus gallus similar to gamma-adaptin related protein,
            GGA2 (LOC416577), mRNA
          Length = 1875

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 1551 agcactttaatcagctcattgagaa 1575
            |||||||||||||||||||| ||||
Sbjct: 284  agcactttaatcagctcattcagaa 260
to top
>gb|AC155976.2| Xenopus tropicalis clone CH216-54H11, complete sequence
          Length = 176156

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 2356  gctttgtaaatatacatatat 2376
             |||||||||||||||||||||
Sbjct: 23474 gctttgtaaatatacatatat 23494
to top
>gb|AC189009.3| Gallus gallus BAC clone CH261-51H3 from chromosome z, complete sequence
          Length = 164903

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1507  acaaaatgctgacaaggcaca 1527
             |||||||||||||||||||||
Sbjct: 97136 acaaaatgctgacaaggcaca 97156
to top
>ref|NM_001068617.1| Oryza sativa (japonica cultivar-group) Os08g0484500 (Os08g0484500)
           mRNA, complete cds
          Length = 1745

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 853 tacgctctccaacccaaagga 873
           |||||||||||||||||||||
Sbjct: 939 tacgctctccaacccaaagga 919
to top
>ref|NM_001052477.1| Oryza sativa (japonica cultivar-group) Os02g0156400 (Os02g0156400)
            mRNA, complete cds
          Length = 2534

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1503 caaaacaaaatgctgacaagg 1523
            |||||||||||||||||||||
Sbjct: 2127 caaaacaaaatgctgacaagg 2147
to top
>gb|CP000383.1| Cytophaga hutchinsonii ATCC 33406, complete genome
          Length = 4433218

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 1032    caaaagtacctttgaattcta 1052
               |||||||||||||||||||||
Sbjct: 1551194 caaaagtacctttgaattcta 1551214
to top
>ref|XM_001068417.1| PREDICTED: Rattus norvegicus similar to fibrous sheath-interacting
             protein 2 (predicted) (RGD1564434_predicted), mRNA
          Length = 20444

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1510  aaatgctgacaaggcacatca 1530
             |||||||||||||||||||||
Sbjct: 10458 aaatgctgacaaggcacatca 10478
to top
>ref|XR_005709.1| PREDICTED: Rattus norvegicus similar to FLJ44048 protein (LOC680325),
            mRNA
          Length = 18150

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1510 aaatgctgacaaggcacatca 1530
            |||||||||||||||||||||
Sbjct: 9228 aaatgctgacaaggcacatca 9248
to top
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 575     gagactgaaataggcaaccac 595
               |||||||||||||||||||||
Sbjct: 1451075 gagactgaaataggcaaccac 1451095
to top
>gb|AF196779.2| Homo sapiens chromosome X multiple clones map p11.23, complete sequence
          Length = 176767

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 1443   atgaatcaacaatcatgaaaatgaa 1467
              ||||| |||||||||||||||||||
Sbjct: 176316 atgaaacaacaatcatgaaaatgaa 176340
to top
>gb|AF235097.2| Homo sapiens chromosome X multiple clones map p11.23, complete sequence
          Length = 140335

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 1443  atgaatcaacaatcatgaaaatgaa 1467
             ||||| |||||||||||||||||||
Sbjct: 21586 atgaaacaacaatcatgaaaatgaa 21610
to top
>ref|XM_705489.1| Candida albicans SC5314 endoplasmic reticulum mannosyltransferase
           (CaO19.8808), mRNA
          Length = 1287

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 178 tgtcgatgcagctgttggatt 198
           |||||||||||||||||||||
Sbjct: 78  tgtcgatgcagctgttggatt 98
to top
>ref|XM_705479.1| Candida albicans SC5314 endoplasmic reticulum mannosyltransferase
           (CaO19.1221), mRNA
          Length = 1287

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 178 tgtcgatgcagctgttggatt 198
           |||||||||||||||||||||
Sbjct: 78  tgtcgatgcagctgttggatt 98
to top
>gb|AC148474.1| Pan troglodytes fosmid clone CH1251-1322F5 from Y, complete sequence
          Length = 33077

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1859  agaaagctccaaaaggaagcc 1879
             |||||||||||||||||||||
Sbjct: 15943 agaaagctccaaaaggaagcc 15963
to top
>gb|AC149133.1| Pan troglodytes chromosome X clone RP43-010O16 map human ortholog p11.23
              complete sequence
          Length = 179327

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 1443   atgaatcaacaatcatgaaaatgaa 1467
              ||||| |||||||||||||||||||
Sbjct: 149508 atgaaacaacaatcatgaaaatgaa 149532
to top
>dbj|AK048133.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130036L01 product:unclassifiable, full
            insert sequence
          Length = 3015

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1758 aagaggctacagcaagggagcaaat 1782
            ||||||||||||||||||| |||||
Sbjct: 2950 aagaggctacagcaagggaacaaat 2974
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 853      tacgctctccaacccaaagga 873
                |||||||||||||||||||||
Sbjct: 23929184 tacgctctccaacccaaagga 23929204
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 1503    caaaacaaaatgctgacaagg 1523
               |||||||||||||||||||||
Sbjct: 3092975 caaaacaaaatgctgacaagg 3092955
to top
>dbj|BS000652.2| Pan troglodytes chromosome Y clone: PTBY-013L08, complete sequence
          Length = 134024

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1859  agaaagctccaaaaggaagcc 1879
             |||||||||||||||||||||
Sbjct: 35321 agaaagctccaaaaggaagcc 35301
to top
>gb|AC154779.3| Mus musculus BAC clone RP24-461H19 from chromosome 17, complete
             sequence
          Length = 188929

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 433   gaacagccttcttcaggagca 453
             |||||||||||||||||||||
Sbjct: 94054 gaacagccttcttcaggagca 94074
to top
>emb|AL133231.15| Human DNA sequence from clone RP5-867F11 on chromosome 20 Contains
            the TCF15 gene for transcription factor 15 (basic
            helix-loop-helix) and a CpG island, complete sequence
          Length = 50488

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1049 tctactgaggaggaaaatgag 1069
            |||||||||||||||||||||
Sbjct: 7621 tctactgaggaggaaaatgag 7601
to top
>emb|AL133474.9| Human DNA sequence from clone RP1-239I6 on chromosome 6, complete
             sequence
          Length = 102142

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1356  ataactccactcagccatttc 1376
             |||||||||||||||||||||
Sbjct: 29219 ataactccactcagccatttc 29199
to top
>emb|AL935261.1| Lactobacillus plantarum strain WCFS1 complete genome; segment 10/11
          Length = 298050

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1197  tatcttcaatacatctcaata 1217
             |||||||||||||||||||||
Sbjct: 91808 tatcttcaatacatctcaata 91788
to top
>emb|AJ006216.1|HSA6216 Homo sapiens CACNA1F gene, exons 1 to 48
          Length = 31501

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 1443  atgaatcaacaatcatgaaaatgaa 1467
             ||||| |||||||||||||||||||
Sbjct: 21478 atgaaacaacaatcatgaaaatgaa 21454
to top
>emb|AL663108.4| Mouse DNA sequence from clone RP23-19H23 on chromosome 11 Contains a
             glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene
             and a ribosomal protein L36 (Rpl36) pseudogene, complete
             sequence
          Length = 215362

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 2373  atatggagatggacatatatcagta 2397
             ||||||||||||||| |||||||||
Sbjct: 75746 atatggagatggacaaatatcagta 75722
to top
>dbj|BS000631.2| Pan troglodytes chromosome Y clone: PTB-395F06, complete sequence
          Length = 123227

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1859  agaaagctccaaaaggaagcc 1879
             |||||||||||||||||||||
Sbjct: 43307 agaaagctccaaaaggaagcc 43287
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1493   tctcgactagcaaaacaaaat 1513
              |||||||||||||||||||||
Sbjct: 638740 tctcgactagcaaaacaaaat 638720
to top
>gb|AC006999.2|AC006999 Homo sapiens BAC clone RP11-462A19 from Y, complete sequence
          Length = 112878

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1859  agaaagctccaaaaggaagcc 1879
             |||||||||||||||||||||
Sbjct: 44301 agaaagctccaaaaggaagcc 44281
to top
>dbj|AP004871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0419H03
          Length = 129020

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1503  caaaacaaaatgctgacaagg 1523
             |||||||||||||||||||||
Sbjct: 21129 caaaacaaaatgctgacaagg 21109
to top
>dbj|AP005918.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0419H09
          Length = 143533

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 853   tacgctctccaacccaaagga 873
             |||||||||||||||||||||
Sbjct: 62335 tacgctctccaacccaaagga 62355
to top
>gb|AF217202.1|AF217202 Filobasidiella neoformans plasma membrane H(+)-ATPase (PMA1) gene,
            complete cds
          Length = 3915

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 2080 tgagaacagagatgatcaggaccat 2104
            ||||||||| |||||||||||||||
Sbjct: 2933 tgagaacagcgatgatcaggaccat 2909
to top
>gb|AF217201.1|AF217201 Filobasidiella neoformans plasma membrane H(+)-ATPase (PMA1) mRNA,
            complete cds
          Length = 3483

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 2080 tgagaacagagatgatcaggaccat 2104
            ||||||||| |||||||||||||||
Sbjct: 2557 tgagaacagcgatgatcaggaccat 2533
to top
>dbj|AK106196.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-E11, full
           insert sequence
          Length = 1175

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 853 tacgctctccaacccaaagga 873
           |||||||||||||||||||||
Sbjct: 381 tacgctctccaacccaaagga 361
to top
>dbj|AK100447.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090H21, full
            insert sequence
          Length = 2535

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1503 caaaacaaaatgctgacaagg 1523
            |||||||||||||||||||||
Sbjct: 2128 caaaacaaaatgctgacaagg 2148
to top
>dbj|AK070359.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054B06, full
           insert sequence
          Length = 1746

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 853 tacgctctccaacccaaagga 873
           |||||||||||||||||||||
Sbjct: 940 tacgctctccaacccaaagga 920
to top
>emb|AL929560.14| Zebrafish DNA sequence from clone CH211-241O15 in linkage group 17,
             complete sequence
          Length = 103820

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1055  gaggaggaaaatgagcagtct 1075
             |||||||||||||||||||||
Sbjct: 37299 gaggaggaaaatgagcagtct 37279
to top
>gb|AC103378.21| Mus musculus chromosome 8, clone RP24-231N10, complete sequence
          Length = 191479

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 1758  aagaggctacagcaagggagcaaat 1782
             ||||||||||||||||||| |||||
Sbjct: 35186 aagaggctacagcaagggaacaaat 35210
to top
>emb|CR352220.19| Zebrafish DNA sequence from clone DKEY-148F10 in linkage group 17,
             complete sequence
          Length = 174580

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1055  gaggaggaaaatgagcagtct 1075
             |||||||||||||||||||||
Sbjct: 48660 gaggaggaaaatgagcagtct 48680
to top
>gb|AF025480.1|AF025480 Bison bison Na-Ca+K exchanger (BISNCKX) mRNA, partial cds
          Length = 900

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1055 gaggaggaaaatgagcagtctttgt 1079
            |||||||||||||||||| ||||||
Sbjct: 718  gaggaggaaaatgagcagcctttgt 742
to top
>gb|U93305.1|HSU93305 Homo sapiens A4 differentiation-dependent protein (A4), triple LIM
             domain protein (LMO6), and synaptophysin (SYP) genes,
             complete cds; and calcium channel alpha-1 subunit
             (CACNA1F) gene, partial cds
          Length = 44147

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 1443  atgaatcaacaatcatgaaaatgaa 1467
             ||||| |||||||||||||||||||
Sbjct: 43695 atgaaacaacaatcatgaaaatgaa 43719
to top
>emb|AL844168.5| Mouse DNA sequence from clone RP23-413G9 on chromosome 4, complete
            sequence
          Length = 143572

 Score = 42.1 bits (21), Expect = 9.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 867  caaaggataataatgacttacaaat 891
            |||||||||||||||||||| ||||
Sbjct: 7247 caaaggataataatgacttaaaaat 7271


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 496,468,148
Number of extensions: 27870704
Number of successful extensions: 141563
Number of sequences better than 10.0: 65
Number of HSP's gapped: 141563
Number of HSP's successfully gapped: 65
Length of query: 2429
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 2406
Effective length of database: 18,503,978,556
Effective search space: 44520572405736
Effective search space used: 44520572405736
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)
to top