| Clone Name | FLbaf142h02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY103818.1| Zea mays PCO124949 mRNA sequence Length = 1251 Score = 424 bits (214), Expect = e-115 Identities = 595/722 (82%) Strand = Plus / Plus Query: 164 gaggtgacgcagctgttcgaacgcttcaaggcggcctgcaagcgcagcgatctcgacgcc 223 |||||||| ||| |||||| |||||||||||||||| | |||| ||| ||| || || Sbjct: 227 gaggtgacccagatgttcgcccgcttcaaggcggcctacgcccgcaacgacctcaacacc 286 Query: 224 tccgcgaccctcctctcgcagctcaaggtgctcctcaccaagttccccagcctccctccg 283 | || ||||||||||||||||||||||| | |||||| | ||||||||||| || || Sbjct: 287 tgcgtcaccctcctctcgcagctcaaggtccatctcacccaattccccagccttccgccc 346 Query: 284 ctcttccagcagacgcccaacgccgtggaggagctcaagctcgcgagggaaatttatgag 343 | || |||||||| || ||| |||||||||||||| || || ||||| ||||||||| Sbjct: 347 ttgtttcagcagacaccgaacattgtggaggagctcaaacttgcaagggacatttatgag 406 Query: 344 catgcagttcttttgagtgtgaaaatggaagatcaagatgcatttgaaagggacttctgc 403 ||||| ||| |||||||||||||| | || || |||||||| |||||| | || |||||| Sbjct: 407 catgctgttgttttgagtgtgaaacttgaggaccaagatgcgtttgaacgcgatttctgc 466 Query: 404 cagctcaagccttattacatggacacatgtggcatacttcctccatcttcaatggagtac 463 ||||| ||||||||||||||||| |||||||||||| |||| | || || ||||||| Sbjct: 467 cagctgaagccttattacatggatacatgtggcataattcccgcctcgccagaggagtac 526 Query: 464 ccaatcatggggcttaaccttctgaggctgttggtccagaatagaattgcggagttccac 523 ||||| |||| || || ||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 527 ccaattttgggactcaatcttctgaggctgttggttcagaatagaattgccgagttccac 586 Query: 524 actgagctggagcttctgcccgccaaagcgctggagaatgcttgcatcaagcacggggtt 583 ||||||||||||||| | || | ||| || || ||| || ||||||||||||| | || Sbjct: 587 actgagctggagcttttacctgtcaaggcactcgagcatccttgcatcaagcatgctgta 646 Query: 584 gagctcgagcagtcctttatggagggcgcctacaaccgtgtgctgagcgctcggcaaacc 643 ||||| ||||| ||||| |||||||| ||||||||||| ||| | ||||||||||| | Sbjct: 647 gagcttgagcaatccttcatggagggtgcctacaaccgagtgttaagcgctcggcaggct 706 Query: 644 gcaccgcatgagacctacgtatacttcatggaccttctcgccaaaacggttagagacgag 703 | || |||||||||||||| |||||||| ||||||||||||||||| |||||||| ||| Sbjct: 707 gtgccacatgagacctacgtttacttcatcgaccttctcgccaaaacagttagagatgag 766 Query: 704 atagctgggtgcagcgagaagggatatgattacctgtcaataagcgatgcgaagcagatg 763 || |||||||||||||| ||||| ||||||| || || | || ||||| ||||| ||| Sbjct: 767 atcgctgggtgcagcgaaaaggggtatgattctctatctgtgagtgatgcaaagcaaatg 826 Query: 764 tttatgttcagctccgacaaggaactgcagcagtacatcgcagaggaacaccccgagtgg 823 |||||||||| || ||| | || ||||| |||||||| | ||||| ||||| || ||| Sbjct: 827 cttatgttcagttctgaccaagatctgcacgagtacatcactgaggagcacccggaatgg 886 Query: 824 gatgtcaaggacggcagcgtcttgttccagaaggcgaaggagtcgcagccctgcaaggag 883 || | ||| |||| ||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 887 gagattaagaacggtgctgtcttcttccagaaggcgaaggagtcacagccctgcaaggag 946 Query: 884 at 885 || Sbjct: 947 at 948
>gb|BT016262.1| Zea mays clone Contig95 mRNA sequence Length = 1020 Score = 416 bits (210), Expect = e-113 Identities = 594/722 (82%) Strand = Plus / Plus Query: 164 gaggtgacgcagctgttcgaacgcttcaaggcggcctgcaagcgcagcgatctcgacgcc 223 |||||||| ||| |||||| |||||||||||||||| | |||| ||| ||| || || Sbjct: 21 gaggtgacccagatgttcgcccgcttcaaggcggcctacgcccgcaacgacctcaacacc 80 Query: 224 tccgcgaccctcctctcgcagctcaaggtgctcctcaccaagttccccagcctccctccg 283 | || ||||||||||||||||||||||| | |||||| | ||||||||||| || || Sbjct: 81 tgcgtcaccctcctctcgcagctcaaggtccatctcacccaattccccagccttccgccc 140 Query: 284 ctcttccagcagacgcccaacgccgtggaggagctcaagctcgcgagggaaatttatgag 343 | || |||||||| || ||| |||||||||||||| || || ||||| ||||||||| Sbjct: 141 ttgtttcagcagacaccgaacattgtggaggagctcaaacttgcaagggacatttatgag 200 Query: 344 catgcagttcttttgagtgtgaaaatggaagatcaagatgcatttgaaagggacttctgc 403 ||||| ||| |||||||||||||| | || || |||||||| |||||| | || |||||| Sbjct: 201 catgctgttgttttgagtgtgaaacttgaggaccaagatgcgtttgaacgcgatttctgc 260 Query: 404 cagctcaagccttattacatggacacatgtggcatacttcctccatcttcaatggagtac 463 ||||| ||||||||||||||||| |||||||||||| |||| | || || ||||||| Sbjct: 261 cagctgaagccttattacatggatacatgtggcataattcccgcctcgccagaggagtac 320 Query: 464 ccaatcatggggcttaaccttctgaggctgttggtccagaatagaattgcggagttccac 523 ||||| |||| || || ||||||||||||||||| |||||||||||||| || |||||| Sbjct: 321 ccaattttgggactcaatcttctgaggctgttggttcagaatagaattgccgaattccac 380 Query: 524 actgagctggagcttctgcccgccaaagcgctggagaatgcttgcatcaagcacggggtt 583 ||||||||||||||| | || ||||| || || ||| || ||||||||||||| | || Sbjct: 381 actgagctggagcttttacctgccaaggcactcgagcatccttgcatcaagcatgctgta 440 Query: 584 gagctcgagcagtcctttatggagggcgcctacaaccgtgtgctgagcgctcggcaaacc 643 ||||| ||||| ||||| |||||||| ||||||||||| ||| | ||||||||||| | Sbjct: 441 gagcttgagcaatccttcatggagggtgcctacaaccgagtgttaagcgctcggcaggct 500 Query: 644 gcaccgcatgagacctacgtatacttcatggaccttctcgccaaaacggttagagacgag 703 | || |||||||||||||| |||||||| ||||||||||||||||| |||||||| ||| Sbjct: 501 gtgccacatgagacctacgtttacttcatcgaccttctcgccaaaacagttagagatgag 560 Query: 704 atagctgggtgcagcgagaagggatatgattacctgtcaataagcgatgcgaagcagatg 763 || |||||||||||||| ||||| ||||||| || || | || ||||| ||||| ||| Sbjct: 561 atcgctgggtgcagcgaaaaggggtatgattctctatctgtgagtgatgcaaagcaaatg 620 Query: 764 tttatgttcagctccgacaaggaactgcagcagtacatcgcagaggaacaccccgagtgg 823 |||||||||| || ||| | || ||||| |||||||| | ||||| ||||| || ||| Sbjct: 621 cttatgttcagttctgaccaagatctgcacgagtacatcactgaggagcacccggaatgg 680 Query: 824 gatgtcaaggacggcagcgtcttgttccagaaggcgaaggagtcgcagccctgcaaggag 883 || | ||| |||| ||||| ||||||||||||||||| || ||||||||||||||| Sbjct: 681 gagattaagaacggtgctgtcttcttccagaaggcgaaggaatcacagccctgcaaggag 740 Query: 884 at 885 || Sbjct: 741 at 742
>ref|NM_001066035.1| Oryza sativa (japonica cultivar-group) Os07g0435100 (Os07g0435100) mRNA, complete cds Length = 1230 Score = 392 bits (198), Expect = e-105 Identities = 537/650 (82%) Strand = Plus / Plus Query: 239 tcgcagctcaaggtgctcctcaccaagttccccagcctccctccgctcttccagcagacg 298 |||||||||||||| | ||||||||||||||||||||| ||||| || |||||||| Sbjct: 185 tcgcagctcaaggtccgcctcaccaagttccccagccttcctccatcatttcagcagaca 244 Query: 299 cccaacgccgtggaggagctcaagctcgcgagggaaatttatgagcatgcagttcttttg 358 || || || ||||| ||||| || | |||||||| || ||||||||||||||| || || Sbjct: 245 ccgaatgcagtggaagagctgaaaattgcgagggacatctatgagcatgcagttgttctg 304 Query: 359 agtgtgaaaatggaagatcaagatgcatttgaaagggacttctgccagctcaagccttat 418 ||||||||||| ||||| ||||||||||||||||||||||| || || ||||| |||||| Sbjct: 305 agtgtgaaaattgaagaccaagatgcatttgaaagggacttttgtcaactcaaaccttat 364 Query: 419 tacatggacacatgtggcatacttcctccatcttcaatggagtacccaatcatggggctt 478 |||||||| ||||| |||||| |||| ||||| || |||||| |||||| |||| ||| Sbjct: 365 tacatggatacatgcggcataattccaccatcaccacaggagtatccaatcttgggtctt 424 Query: 479 aaccttctgaggctgttggtccagaatagaattgcggagttccacactgagctggagctt 538 || ||||| |||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 425 aatcttctaaggctgttagttcagaacagaattgcagagttccacactgagctggaactt 484 Query: 539 ctgcccgccaaagcgctggagaatgcttgcatcaagcacggggttgagctcgagcagtcc 598 ||||| | || ||| || || ||| ||||||||||||| | ||| ||||| |||||||| Sbjct: 485 ctgccggtcacagcacttgaaaatccttgcatcaagcatgcggtggagcttgagcagtca 544 Query: 599 tttatggagggcgcctacaaccgtgtgctgagcgctcggcaaaccgcaccgcatgagacc 658 ||||||||||| || |||||||| ||| |||||||||| || | | || || || || Sbjct: 545 tttatggagggtgcttacaaccgagtgttgagcgctcgccaggctgtgccccacgaaaca 604 Query: 659 tacgtatacttcatggaccttctcgccaaaacggttagagacgagatagctgggtgcagc 718 || || ||||||||||| ||||| |||||||| || ||||| || | ||||| ||||| Sbjct: 605 tatgtgtacttcatggatcttcttgccaaaacagtcagagatgaactggctggttgcagt 664 Query: 719 gagaagggatatgattacctgtcaataagcgatgcgaagcagatgtttatgttcagctcc 778 |||||||| |||||||| |||||||| || || | || || | ||||||||||| Sbjct: 665 gagaagggttatgattatatgtcaatagctgaagcaagacaagtgctgatgttcagctct 724 Query: 779 gacaaggaactgcagcagtacatcgcagaggaacaccccgagtgggatgtcaaggacggc 838 ||||| ||| |||| ||||||||||||||||| ||||| || ||||| || ||||| || Sbjct: 725 gacaaagaattgcaccagtacatcgcagaggagcaccctgaatgggaggtaaaggatggt 784 Query: 839 agcgtcttgttccagaaggcgaaggagtcgcagccctgcaaggagatacc 888 |||||| |||||||||||||||||| | |||||||||||||||||||| Sbjct: 785 tccgtcttcttccagaaggcgaaggagacccagccctgcaaggagatacc 834 Score = 61.9 bits (31), Expect = 5e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 146 atggatccgaagttggtggaggtgacgcagctgttcgaacgcttcaaggcggcct 200 |||||||||||| ||||||||||||||||||| ||| ||||||||||| |||| Sbjct: 92 atggatccgaagctggtggaggtgacgcagctcttctcccgcttcaaggcagcct 146
>dbj|AK061408.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-A10, full insert sequence Length = 1053 Score = 392 bits (198), Expect = e-105 Identities = 537/650 (82%) Strand = Plus / Plus Query: 239 tcgcagctcaaggtgctcctcaccaagttccccagcctccctccgctcttccagcagacg 298 |||||||||||||| | ||||||||||||||||||||| ||||| || |||||||| Sbjct: 173 tcgcagctcaaggtccgcctcaccaagttccccagccttcctccatcatttcagcagaca 232 Query: 299 cccaacgccgtggaggagctcaagctcgcgagggaaatttatgagcatgcagttcttttg 358 || || || ||||| ||||| || | |||||||| || ||||||||||||||| || || Sbjct: 233 ccgaatgcagtggaagagctgaaaattgcgagggacatctatgagcatgcagttgttctg 292 Query: 359 agtgtgaaaatggaagatcaagatgcatttgaaagggacttctgccagctcaagccttat 418 ||||||||||| ||||| ||||||||||||||||||||||| || || ||||| |||||| Sbjct: 293 agtgtgaaaattgaagaccaagatgcatttgaaagggacttttgtcaactcaaaccttat 352 Query: 419 tacatggacacatgtggcatacttcctccatcttcaatggagtacccaatcatggggctt 478 |||||||| ||||| |||||| |||| ||||| || |||||| |||||| |||| ||| Sbjct: 353 tacatggatacatgcggcataattccaccatcaccacaggagtatccaatcttgggtctt 412 Query: 479 aaccttctgaggctgttggtccagaatagaattgcggagttccacactgagctggagctt 538 || ||||| |||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 413 aatcttctaaggctgttagttcagaacagaattgcagagttccacactgagctggaactt 472 Query: 539 ctgcccgccaaagcgctggagaatgcttgcatcaagcacggggttgagctcgagcagtcc 598 ||||| | || ||| || || ||| ||||||||||||| | ||| ||||| |||||||| Sbjct: 473 ctgccggtcacagcacttgaaaatccttgcatcaagcatgcggtggagcttgagcagtca 532 Query: 599 tttatggagggcgcctacaaccgtgtgctgagcgctcggcaaaccgcaccgcatgagacc 658 ||||||||||| || |||||||| ||| |||||||||| || | | || || || || Sbjct: 533 tttatggagggtgcttacaaccgagtgttgagcgctcgccaggctgtgccccacgaaaca 592 Query: 659 tacgtatacttcatggaccttctcgccaaaacggttagagacgagatagctgggtgcagc 718 || || ||||||||||| ||||| |||||||| || ||||| || | ||||| ||||| Sbjct: 593 tatgtgtacttcatggatcttcttgccaaaacagtcagagatgaactggctggttgcagt 652 Query: 719 gagaagggatatgattacctgtcaataagcgatgcgaagcagatgtttatgttcagctcc 778 |||||||| |||||||| |||||||| || || | || || | ||||||||||| Sbjct: 653 gagaagggttatgattatatgtcaatagctgaagcaagacaagtgctgatgttcagctct 712 Query: 779 gacaaggaactgcagcagtacatcgcagaggaacaccccgagtgggatgtcaaggacggc 838 ||||| ||| |||| ||||||||||||||||| ||||| || ||||| || ||||| || Sbjct: 713 gacaaagaattgcaccagtacatcgcagaggagcaccctgaatgggaggtaaaggatggt 772 Query: 839 agcgtcttgttccagaaggcgaaggagtcgcagccctgcaaggagatacc 888 |||||| |||||||||||||||||| | |||||||||||||||||||| Sbjct: 773 tccgtcttcttccagaaggcgaaggagacccagccctgcaaggagatacc 822 Score = 61.9 bits (31), Expect = 5e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 146 atggatccgaagttggtggaggtgacgcagctgttcgaacgcttcaaggcggcct 200 |||||||||||| ||||||||||||||||||| ||| ||||||||||| |||| Sbjct: 80 atggatccgaagctggtggaggtgacgcagctcttctcccgcttcaaggcagcct 134
>dbj|AK061383.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-H08, full insert sequence Length = 1230 Score = 392 bits (198), Expect = e-105 Identities = 537/650 (82%) Strand = Plus / Plus Query: 239 tcgcagctcaaggtgctcctcaccaagttccccagcctccctccgctcttccagcagacg 298 |||||||||||||| | ||||||||||||||||||||| ||||| || |||||||| Sbjct: 185 tcgcagctcaaggtccgcctcaccaagttccccagccttcctccatcatttcagcagaca 244 Query: 299 cccaacgccgtggaggagctcaagctcgcgagggaaatttatgagcatgcagttcttttg 358 || || || ||||| ||||| || | |||||||| || ||||||||||||||| || || Sbjct: 245 ccgaatgcagtggaagagctgaaaattgcgagggacatctatgagcatgcagttgttctg 304 Query: 359 agtgtgaaaatggaagatcaagatgcatttgaaagggacttctgccagctcaagccttat 418 ||||||||||| ||||| ||||||||||||||||||||||| || || ||||| |||||| Sbjct: 305 agtgtgaaaattgaagaccaagatgcatttgaaagggacttttgtcaactcaaaccttat 364 Query: 419 tacatggacacatgtggcatacttcctccatcttcaatggagtacccaatcatggggctt 478 |||||||| ||||| |||||| |||| ||||| || |||||| |||||| |||| ||| Sbjct: 365 tacatggatacatgcggcataattccaccatcaccacaggagtatccaatcttgggtctt 424 Query: 479 aaccttctgaggctgttggtccagaatagaattgcggagttccacactgagctggagctt 538 || ||||| |||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 425 aatcttctaaggctgttagttcagaacagaattgcagagttccacactgagctggaactt 484 Query: 539 ctgcccgccaaagcgctggagaatgcttgcatcaagcacggggttgagctcgagcagtcc 598 ||||| | || ||| || || ||| ||||||||||||| | ||| ||||| |||||||| Sbjct: 485 ctgccggtcacagcacttgaaaatccttgcatcaagcatgcggtggagcttgagcagtca 544 Query: 599 tttatggagggcgcctacaaccgtgtgctgagcgctcggcaaaccgcaccgcatgagacc 658 ||||||||||| || |||||||| ||| |||||||||| || | | || || || || Sbjct: 545 tttatggagggtgcttacaaccgagtgttgagcgctcgccaggctgtgccccacgaaaca 604 Query: 659 tacgtatacttcatggaccttctcgccaaaacggttagagacgagatagctgggtgcagc 718 || || ||||||||||| ||||| |||||||| || ||||| || | ||||| ||||| Sbjct: 605 tatgtgtacttcatggatcttcttgccaaaacagtcagagatgaactggctggttgcagt 664 Query: 719 gagaagggatatgattacctgtcaataagcgatgcgaagcagatgtttatgttcagctcc 778 |||||||| |||||||| |||||||| || || | || || | ||||||||||| Sbjct: 665 gagaagggttatgattatatgtcaatagctgaagcaagacaagtgctgatgttcagctct 724 Query: 779 gacaaggaactgcagcagtacatcgcagaggaacaccccgagtgggatgtcaaggacggc 838 ||||| ||| |||| ||||||||||||||||| ||||| || ||||| || ||||| || Sbjct: 725 gacaaagaattgcaccagtacatcgcagaggagcaccctgaatgggaggtaaaggatggt 784 Query: 839 agcgtcttgttccagaaggcgaaggagtcgcagccctgcaaggagatacc 888 |||||| |||||||||||||||||| | |||||||||||||||||||| Sbjct: 785 tccgtcttcttccagaaggcgaaggagacccagccctgcaaggagatacc 834 Score = 61.9 bits (31), Expect = 5e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 146 atggatccgaagttggtggaggtgacgcagctgttcgaacgcttcaaggcggcct 200 |||||||||||| ||||||||||||||||||| ||| ||||||||||| |||| Sbjct: 92 atggatccgaagctggtggaggtgacgcagctcttctcccgcttcaaggcagcct 146
>dbj|AB037153.1| Oryza sativa (japonica cultivar-group) OsRPN12 mRNA for 26S proteasome regulatory particle non-ATPase subunit12, complete cds Length = 1063 Score = 392 bits (198), Expect = e-105 Identities = 537/650 (82%) Strand = Plus / Plus Query: 239 tcgcagctcaaggtgctcctcaccaagttccccagcctccctccgctcttccagcagacg 298 |||||||||||||| | ||||||||||||||||||||| ||||| || |||||||| Sbjct: 169 tcgcagctcaaggtccgcctcaccaagttccccagccttcctccatcatttcagcagaca 228 Query: 299 cccaacgccgtggaggagctcaagctcgcgagggaaatttatgagcatgcagttcttttg 358 || || || ||||| ||||| || | |||||||| || ||||||||||||||| || || Sbjct: 229 ccgaatgcagtggaagagctgaaaattgcgagggacatctatgagcatgcagttgttctg 288 Query: 359 agtgtgaaaatggaagatcaagatgcatttgaaagggacttctgccagctcaagccttat 418 ||||||||||| ||||| ||||||||||||||||||||||| || || ||||| |||||| Sbjct: 289 agtgtgaaaattgaagaccaagatgcatttgaaagggacttttgtcaactcaaaccttat 348 Query: 419 tacatggacacatgtggcatacttcctccatcttcaatggagtacccaatcatggggctt 478 |||||||| ||||| |||||| |||| ||||| || |||||| |||||| |||| ||| Sbjct: 349 tacatggatacatgcggcataattccaccatcaccacaggagtatccaatcttgggtctt 408 Query: 479 aaccttctgaggctgttggtccagaatagaattgcggagttccacactgagctggagctt 538 || ||||| |||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 409 aatcttctaaggctgttagttcagaacagaattgcagagttccacactgagctggaactt 468 Query: 539 ctgcccgccaaagcgctggagaatgcttgcatcaagcacggggttgagctcgagcagtcc 598 ||||| | || ||| || || ||| ||||||||||||| | ||| ||||| |||||||| Sbjct: 469 ctgccggtcacagcacttgaaaatccttgcatcaagcatgcggtggagcttgagcagtca 528 Query: 599 tttatggagggcgcctacaaccgtgtgctgagcgctcggcaaaccgcaccgcatgagacc 658 ||||||||||| || |||||||| ||| |||||||||| || | | || || || || Sbjct: 529 tttatggagggtgcttacaaccgagtgttgagcgctcgccaggctgtgccccacgaaaca 588 Query: 659 tacgtatacttcatggaccttctcgccaaaacggttagagacgagatagctgggtgcagc 718 || || ||||||||||| ||||| |||||||| || ||||| || | ||||| ||||| Sbjct: 589 tatgtgtacttcatggatcttcttgccaaaacagtcagagatgaactggctggttgcagt 648 Query: 719 gagaagggatatgattacctgtcaataagcgatgcgaagcagatgtttatgttcagctcc 778 |||||||| |||||||| |||||||| || || | || || | ||||||||||| Sbjct: 649 gagaagggttatgattatatgtcaatagctgaagcaagacaagtgctgatgttcagctct 708 Query: 779 gacaaggaactgcagcagtacatcgcagaggaacaccccgagtgggatgtcaaggacggc 838 ||||| ||| |||| ||||||||||||||||| ||||| || ||||| || ||||| || Sbjct: 709 gacaaagaattgcaccagtacatcgcagaggagcaccctgaatgggaggtaaaggatggt 768 Query: 839 agcgtcttgttccagaaggcgaaggagtcgcagccctgcaaggagatacc 888 |||||| |||||||||||||||||| | |||||||||||||||||||| Sbjct: 769 tccgtcttcttccagaaggcgaaggagacccagccctgcaaggagatacc 818 Score = 61.9 bits (31), Expect = 5e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 146 atggatccgaagttggtggaggtgacgcagctgttcgaacgcttcaaggcggcct 200 |||||||||||| ||||||||||||||||||| ||| ||||||||||| |||| Sbjct: 76 atggatccgaagctggtggaggtgacgcagctcttctcccgcttcaaggcagcct 130
>dbj|AK101316.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034D03, full insert sequence Length = 1218 Score = 385 bits (194), Expect = e-103 Identities = 536/650 (82%) Strand = Plus / Plus Query: 239 tcgcagctcaaggtgctcctcaccaagttccccagcctccctccgctcttccagcagacg 298 |||||||||||||| | ||||||||||||||| ||||| ||||| || |||||||| Sbjct: 174 tcgcagctcaaggtccgcctcaccaagttcccaagccttcctccatcatttcagcagaca 233 Query: 299 cccaacgccgtggaggagctcaagctcgcgagggaaatttatgagcatgcagttcttttg 358 || || || ||||| ||||| || | |||||||| || ||||||||||||||| || || Sbjct: 234 ccgaatgcagtggaagagctgaaaattgcgagggacatctatgagcatgcagttgttctg 293 Query: 359 agtgtgaaaatggaagatcaagatgcatttgaaagggacttctgccagctcaagccttat 418 ||||||||||| ||||| ||||||||||||||||||||||| || || ||||| |||||| Sbjct: 294 agtgtgaaaattgaagaccaagatgcatttgaaagggacttttgtcaactcaaaccttat 353 Query: 419 tacatggacacatgtggcatacttcctccatcttcaatggagtacccaatcatggggctt 478 |||||||| ||||| |||||| |||| ||||| || |||||| |||||| |||| ||| Sbjct: 354 tacatggatacatgcggcataattccaccatcaccacaggagtatccaatcttgggtctt 413 Query: 479 aaccttctgaggctgttggtccagaatagaattgcggagttccacactgagctggagctt 538 || ||||| |||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 414 aatcttctaaggctgttagttcagaacagaattgcagagttccacactgagctggaactt 473 Query: 539 ctgcccgccaaagcgctggagaatgcttgcatcaagcacggggttgagctcgagcagtcc 598 ||||| | || ||| || || ||| ||||||||||||| | ||| ||||| |||||||| Sbjct: 474 ctgccggtcacagcacttgaaaatccttgcatcaagcatgcggtggagcttgagcagtca 533 Query: 599 tttatggagggcgcctacaaccgtgtgctgagcgctcggcaaaccgcaccgcatgagacc 658 ||||||||||| || |||||||| ||| |||||||||| || | | || || || || Sbjct: 534 tttatggagggtgcttacaaccgagtgttgagcgctcgccaggctgtgccccacgaaaca 593 Query: 659 tacgtatacttcatggaccttctcgccaaaacggttagagacgagatagctgggtgcagc 718 || || ||||||||||| ||||| |||||||| || ||||| || | ||||| ||||| Sbjct: 594 tatgtgtacttcatggatcttcttgccaaaacagtcagagatgaactggctggttgcagt 653 Query: 719 gagaagggatatgattacctgtcaataagcgatgcgaagcagatgtttatgttcagctcc 778 |||||||| |||||||| |||||||| || || | || || | ||||||||||| Sbjct: 654 gagaagggttatgattatatgtcaatagctgaagcaagacaagtgctgatgttcagctct 713 Query: 779 gacaaggaactgcagcagtacatcgcagaggaacaccccgagtgggatgtcaaggacggc 838 ||||| ||| |||| ||||||||||||||||| ||||| || ||||| || ||||| || Sbjct: 714 gacaaagaattgcaccagtacatcgcagaggagcaccctgaatgggaggtaaaggatggt 773 Query: 839 agcgtcttgttccagaaggcgaaggagtcgcagccctgcaaggagatacc 888 |||||| |||||||||||||||||| | |||||||||||||||||||| Sbjct: 774 tccgtcttcttccagaaggcgaaggagacccagccctgcaaggagatacc 823 Score = 61.9 bits (31), Expect = 5e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 146 atggatccgaagttggtggaggtgacgcagctgttcgaacgcttcaaggcggcct 200 |||||||||||| ||||||||||||||||||| ||| ||||||||||| |||| Sbjct: 81 atggatccgaagctggtggaggtgacgcagctcttctcccgcttcaaggcagcct 135
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 151 bits (76), Expect = 7e-33 Identities = 154/180 (85%) Strand = Plus / Minus Query: 457 ggagtacccaatcatggggcttaaccttctgaggctgttggtccagaatagaattgcgga 516 |||||| |||||| |||| ||||| ||||| |||||||| || ||||| |||||||| || Sbjct: 14474888 ggagtatccaatcttgggtcttaatcttctaaggctgttagttcagaacagaattgcaga 14474829 Query: 517 gttccacactgagctggagcttctgcccgccaaagcgctggagaatgcttgcatcaagca 576 |||||||||||||||||| |||||||| | || ||| || || ||| ||||||||||||| Sbjct: 14474828 gttccacactgagctggaacttctgccggtcacagcacttgaaaatccttgcatcaagca 14474769 Query: 577 cggggttgagctcgagcagtcctttatggagggcgcctacaaccgtgtgctgagcgctcg 636 | ||| ||||| |||||||| ||||||||||| || |||||||| ||| |||||||||| Sbjct: 14474768 tgcggtggagcttgagcagtcatttatggagggtgcttacaaccgagtgttgagcgctcg 14474709 Score = 117 bits (59), Expect = 9e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 338 tatgagcatgcagttcttttgagtgtgaaaatggaagatcaagatgcatttgaaagggac 397 ||||||||||||||| || ||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 14475455 tatgagcatgcagttgttctgagtgtgaaaattgaagaccaagatgcatttgaaagggac 14475396 Query: 398 ttctgccagctcaagccttattacatggacacatg 432 || || || ||||| |||||||||||||| ||||| Sbjct: 14475395 ttttgtcaactcaaaccttattacatggatacatg 14475361 Score = 71.9 bits (36), Expect = 5e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 841 cgtcttgttccagaaggcgaaggagtcgcagccctgcaaggagatacc 888 |||||| |||||||||||||||||| | |||||||||||||||||||| Sbjct: 14474314 cgtcttcttccagaaggcgaaggagacccagccctgcaaggagatacc 14474267 Score = 61.9 bits (31), Expect = 5e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 146 atggatccgaagttggtggaggtgacgcagctgttcgaacgcttcaaggcggcct 200 |||||||||||| ||||||||||||||||||| ||| ||||||||||| |||| Sbjct: 14476852 atggatccgaagctggtggaggtgacgcagctcttctcccgcttcaaggcagcct 14476798 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Minus Query: 767 atgttcagctccgacaaggaactgcagcagtacatcgcagagg 809 ||||||||||| ||||| ||| |||| |||||||||||||||| Sbjct: 14474470 atgttcagctctgacaaagaattgcaccagtacatcgcagagg 14474428 Score = 46.1 bits (23), Expect = 0.28 Identities = 26/27 (96%) Strand = Plus / Minus Query: 256 cctcaccaagttccccagcctccctcc 282 ||||||||||||||||||||| ||||| Sbjct: 14476273 cctcaccaagttccccagccttcctcc 14476247
>dbj|AP005200.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0673E01 Length = 125909 Score = 151 bits (76), Expect = 7e-33 Identities = 154/180 (85%) Strand = Plus / Minus Query: 457 ggagtacccaatcatggggcttaaccttctgaggctgttggtccagaatagaattgcgga 516 |||||| |||||| |||| ||||| ||||| |||||||| || ||||| |||||||| || Sbjct: 95219 ggagtatccaatcttgggtcttaatcttctaaggctgttagttcagaacagaattgcaga 95160 Query: 517 gttccacactgagctggagcttctgcccgccaaagcgctggagaatgcttgcatcaagca 576 |||||||||||||||||| |||||||| | || ||| || || ||| ||||||||||||| Sbjct: 95159 gttccacactgagctggaacttctgccggtcacagcacttgaaaatccttgcatcaagca 95100 Query: 577 cggggttgagctcgagcagtcctttatggagggcgcctacaaccgtgtgctgagcgctcg 636 | ||| ||||| |||||||| ||||||||||| || |||||||| ||| |||||||||| Sbjct: 95099 tgcggtggagcttgagcagtcatttatggagggtgcttacaaccgagtgttgagcgctcg 95040 Score = 117 bits (59), Expect = 9e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 338 tatgagcatgcagttcttttgagtgtgaaaatggaagatcaagatgcatttgaaagggac 397 ||||||||||||||| || ||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 95786 tatgagcatgcagttgttctgagtgtgaaaattgaagaccaagatgcatttgaaagggac 95727 Query: 398 ttctgccagctcaagccttattacatggacacatg 432 || || || ||||| |||||||||||||| ||||| Sbjct: 95726 ttttgtcaactcaaaccttattacatggatacatg 95692 Score = 71.9 bits (36), Expect = 5e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 841 cgtcttgttccagaaggcgaaggagtcgcagccctgcaaggagatacc 888 |||||| |||||||||||||||||| | |||||||||||||||||||| Sbjct: 94645 cgtcttcttccagaaggcgaaggagacccagccctgcaaggagatacc 94598 Score = 61.9 bits (31), Expect = 5e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 146 atggatccgaagttggtggaggtgacgcagctgttcgaacgcttcaaggcggcct 200 |||||||||||| ||||||||||||||||||| ||| ||||||||||| |||| Sbjct: 97183 atggatccgaagctggtggaggtgacgcagctcttctcccgcttcaaggcagcct 97129 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Minus Query: 767 atgttcagctccgacaaggaactgcagcagtacatcgcagagg 809 ||||||||||| ||||| ||| |||| |||||||||||||||| Sbjct: 94801 atgttcagctctgacaaagaattgcaccagtacatcgcagagg 94759 Score = 46.1 bits (23), Expect = 0.28 Identities = 26/27 (96%) Strand = Plus / Minus Query: 256 cctcaccaagttccccagcctccctcc 282 ||||||||||||||||||||| ||||| Sbjct: 96604 cctcaccaagttccccagccttcctcc 96578
>ref|NM_123569.1| Arabidopsis thaliana peptidase (AT5G42040) mRNA, complete cds Length = 480 Score = 97.6 bits (49), Expect = 8e-17 Identities = 139/169 (82%) Strand = Plus / Plus Query: 555 tggagaatgcttgcatcaagcacggggttgagctcgagcagtcctttatggagggcgcct 614 |||||||| ||||||||||||| | ||| ||||||||||| ||||| ||||| || || | Sbjct: 86 tggagaatccttgcatcaagcatgcggtggagctcgagcaatccttcatggaaggtgctt 145 Query: 615 acaaccgtgtgctgagcgctcggcaaaccgcaccgcatgagacctacgtatacttcatgg 674 | ||||||||| |||| ||| | ||||||||||| ||||||| ||||| || ||||||| Sbjct: 146 ataaccgtgtgttgagtgctagacaaaccgcacctgatgagacttacgtctatttcatgg 205 Query: 675 accttctcgccaaaacggttagagacgagatagctgggtgcagcgagaa 723 | || | || ||||| ||||||| || |||||||| ||||| ||||| Sbjct: 206 atctcttggcaaaaaccattagagatgaaatagctggatgcagtgagaa 254
>gb|AY258413.1| Arabidopsis thaliana 26S proteasome subunit RPN12b (RPN12b) mRNA, complete cds Length = 480 Score = 97.6 bits (49), Expect = 8e-17 Identities = 139/169 (82%) Strand = Plus / Plus Query: 555 tggagaatgcttgcatcaagcacggggttgagctcgagcagtcctttatggagggcgcct 614 |||||||| ||||||||||||| | ||| ||||||||||| ||||| ||||| || || | Sbjct: 86 tggagaatccttgcatcaagcatgcggtggagctcgagcaatccttcatggaaggtgctt 145 Query: 615 acaaccgtgtgctgagcgctcggcaaaccgcaccgcatgagacctacgtatacttcatgg 674 | ||||||||| |||| ||| | ||||||||||| ||||||| ||||| || ||||||| Sbjct: 146 ataaccgtgtgttgagtgctagacaaaccgcacctgatgagacttacgtctatttcatgg 205 Query: 675 accttctcgccaaaacggttagagacgagatagctgggtgcagcgagaa 723 | || | || ||||| ||||||| || |||||||| ||||| ||||| Sbjct: 206 atctcttggcaaaaaccattagagatgaaatagctggatgcagtgagaa 254
>dbj|AB017067.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJC20 Length = 83689 Score = 89.7 bits (45), Expect = 2e-14 Identities = 102/121 (84%) Strand = Plus / Minus Query: 555 tggagaatgcttgcatcaagcacggggttgagctcgagcagtcctttatggagggcgcct 614 |||||||| ||||||||||||| | ||| ||||||||||| ||||| ||||| || || | Sbjct: 36544 tggagaatccttgcatcaagcatgcggtggagctcgagcaatccttcatggaaggtgctt 36485 Query: 615 acaaccgtgtgctgagcgctcggcaaaccgcaccgcatgagacctacgtatacttcatgg 674 | ||||||||| |||| ||| | ||||||||||| ||||||| ||||| || ||||||| Sbjct: 36484 ataaccgtgtgttgagtgctagacaaaccgcacctgatgagacttacgtctatttcatgg 36425 Query: 675 a 675 | Sbjct: 36424 a 36424
>ref|NM_105127.2| Arabidopsis thaliana peptidase (AT1G64520) mRNA, complete cds Length = 1063 Score = 65.9 bits (33), Expect = 3e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 471 tggggcttaaccttctgaggctgttggtccagaatagaattgcggagttccacactgagc 530 |||| |||||||||||||||||| |||| || ||||||||||| || |||||||| |||| Sbjct: 387 tgggtcttaaccttctgaggctgctggtacaaaatagaattgctgaattccacaccgagc 446 Query: 531 t 531 | Sbjct: 447 t 447 Score = 54.0 bits (27), Expect = 0.001 Identities = 57/67 (85%) Strand = Plus / Plus Query: 564 cttgcatcaagcacggggttgagctcgagcagtcctttatggagggcgcctacaaccgtg 623 ||||||||||||| | || ||||| ||||| ||||| |||||||| ||||| ||||||| Sbjct: 480 cttgcatcaagcatgcagtagagcttgagcaatccttcatggagggtgcctataaccgtg 539 Query: 624 tgctgag 630 || |||| Sbjct: 540 tgttgag 546 Score = 42.1 bits (21), Expect = 4.3 Identities = 72/89 (80%) Strand = Plus / Plus Query: 329 agggaaatttatgagcatgcagttcttttgagtgtgaaaatggaagatcaagatgcattt 388 ||||| |||||||||||||| ||| || | || || |||| || ||||||||||| ||| Sbjct: 245 agggacatttatgagcatgctgttgttctaagcgtcaaaaccgaggatcaagatgctttt 304 Query: 389 gaaagggacttctgccagctcaagcctta 417 || || || |||| |||||| || ||||| Sbjct: 305 gagagagatttcttccagctgaaacctta 333
>gb|AY230847.1| Arabidopsis thaliana 26S proteasome subunit RPN12 (RPN12) mRNA, RPN12-2 allele, complete cds Length = 1054 Score = 65.9 bits (33), Expect = 3e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 471 tggggcttaaccttctgaggctgttggtccagaatagaattgcggagttccacactgagc 530 |||| |||||||||||||||||| |||| || ||||||||||| || |||||||| |||| Sbjct: 359 tgggtcttaaccttctgaggctgctggtacaaaatagaattgctgaattccacaccgagc 418 Query: 531 t 531 | Sbjct: 419 t 419 Score = 54.0 bits (27), Expect = 0.001 Identities = 57/67 (85%) Strand = Plus / Plus Query: 564 cttgcatcaagcacggggttgagctcgagcagtcctttatggagggcgcctacaaccgtg 623 ||||||||||||| | || ||||| ||||| ||||| |||||||| ||||| ||||||| Sbjct: 452 cttgcatcaagcatgcagtagagcttgagcaatccttcatggagggtgcctataaccgtg 511 Query: 624 tgctgag 630 || |||| Sbjct: 512 tgttgag 518 Score = 42.1 bits (21), Expect = 4.3 Identities = 72/89 (80%) Strand = Plus / Plus Query: 329 agggaaatttatgagcatgcagttcttttgagtgtgaaaatggaagatcaagatgcattt 388 ||||| |||||||||||||| ||| || | || || |||| || ||||||||||| ||| Sbjct: 217 agggacatttatgagcatgctgttgttctaagcgtcaaaaccgaggatcaagatgctttt 276 Query: 389 gaaagggacttctgccagctcaagcctta 417 || || || |||| |||||| || ||||| Sbjct: 277 gagagagatttcttccagctgaaacctta 305
>gb|AY230846.1| Arabidopsis thaliana 26S proteasome subunit RPN12 (RPN12) mRNA, RPN12-1 allele, complete cds Length = 1038 Score = 65.9 bits (33), Expect = 3e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 471 tggggcttaaccttctgaggctgttggtccagaatagaattgcggagttccacactgagc 530 |||| |||||||||||||||||| |||| || ||||||||||| || |||||||| |||| Sbjct: 349 tgggtcttaaccttctgaggctgctggtacaaaatagaattgctgaattccacaccgagc 408 Query: 531 t 531 | Sbjct: 409 t 409 Score = 54.0 bits (27), Expect = 0.001 Identities = 57/67 (85%) Strand = Plus / Plus Query: 564 cttgcatcaagcacggggttgagctcgagcagtcctttatggagggcgcctacaaccgtg 623 ||||||||||||| | || ||||| ||||| ||||| |||||||| ||||| ||||||| Sbjct: 442 cttgcatcaagcatgcagtagagcttgagcaatccttcatggagggtgcctataaccgtg 501 Query: 624 tgctgag 630 || |||| Sbjct: 502 tgttgag 508 Score = 42.1 bits (21), Expect = 4.3 Identities = 72/89 (80%) Strand = Plus / Plus Query: 329 agggaaatttatgagcatgcagttcttttgagtgtgaaaatggaagatcaagatgcattt 388 ||||| |||||||||||||| ||| || | || || |||| || ||||||||||| ||| Sbjct: 207 agggacatttatgagcatgctgttgttctaagcgtcaaaaccgaggatcaagatgctttt 266 Query: 389 gaaagggacttctgccagctcaagcctta 417 || || || |||| |||||| || ||||| Sbjct: 267 gagagagatttcttccagctgaaacctta 295
>gb|AY143888.1| Arabidopsis thaliana At1g64520/F1N19_10 mRNA, complete cds Length = 804 Score = 65.9 bits (33), Expect = 3e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 471 tggggcttaaccttctgaggctgttggtccagaatagaattgcggagttccacactgagc 530 |||| |||||||||||||||||| |||| || ||||||||||| || |||||||| |||| Sbjct: 326 tgggtcttaaccttctgaggctgctggtacaaaatagaattgctgaattccacaccgagc 385 Query: 531 t 531 | Sbjct: 386 t 386 Score = 54.0 bits (27), Expect = 0.001 Identities = 57/67 (85%) Strand = Plus / Plus Query: 564 cttgcatcaagcacggggttgagctcgagcagtcctttatggagggcgcctacaaccgtg 623 ||||||||||||| | || ||||| ||||| ||||| |||||||| ||||| ||||||| Sbjct: 419 cttgcatcaagcatgcagtagagcttgagcaatccttcatggagggtgcctataaccgtg 478 Query: 624 tgctgag 630 || |||| Sbjct: 479 tgttgag 485 Score = 42.1 bits (21), Expect = 4.3 Identities = 72/89 (80%) Strand = Plus / Plus Query: 329 agggaaatttatgagcatgcagttcttttgagtgtgaaaatggaagatcaagatgcattt 388 ||||| |||||||||||||| ||| || | || || |||| || ||||||||||| ||| Sbjct: 184 agggacatttatgagcatgctgttgttctaagcgtcaaaaccgaggatcaagatgctttt 243 Query: 389 gaaagggacttctgccagctcaagcctta 417 || || || |||| |||||| || ||||| Sbjct: 244 gagagagatttcttccagctgaaacctta 272
>gb|AF410265.1|AF410265 Arabidopsis thaliana At1g64520/F1N19_10 mRNA, complete cds Length = 1008 Score = 65.9 bits (33), Expect = 3e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 471 tggggcttaaccttctgaggctgttggtccagaatagaattgcggagttccacactgagc 530 |||| |||||||||||||||||| |||| || ||||||||||| || |||||||| |||| Sbjct: 372 tgggtcttaaccttctgaggctgctggtacaaaatagaattgctgaattccacaccgagc 431 Query: 531 t 531 | Sbjct: 432 t 432 Score = 54.0 bits (27), Expect = 0.001 Identities = 57/67 (85%) Strand = Plus / Plus Query: 564 cttgcatcaagcacggggttgagctcgagcagtcctttatggagggcgcctacaaccgtg 623 ||||||||||||| | || ||||| ||||| ||||| |||||||| ||||| ||||||| Sbjct: 465 cttgcatcaagcatgcagtagagcttgagcaatccttcatggagggtgcctataaccgtg 524 Query: 624 tgctgag 630 || |||| Sbjct: 525 tgttgag 531 Score = 42.1 bits (21), Expect = 4.3 Identities = 72/89 (80%) Strand = Plus / Plus Query: 329 agggaaatttatgagcatgcagttcttttgagtgtgaaaatggaagatcaagatgcattt 388 ||||| |||||||||||||| ||| || | || || |||| || ||||||||||| ||| Sbjct: 230 agggacatttatgagcatgctgttgttctaagcgtcaaaaccgaggatcaagatgctttt 289 Query: 389 gaaagggacttctgccagctcaagcctta 417 || || || |||| |||||| || ||||| Sbjct: 290 gagagagatttcttccagctgaaacctta 318
>gb|AY039857.1| Arabidopsis thaliana At1g64520/F1N19_10 mRNA, complete cds Length = 953 Score = 65.9 bits (33), Expect = 3e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 471 tggggcttaaccttctgaggctgttggtccagaatagaattgcggagttccacactgagc 530 |||| |||||||||||||||||| |||| || ||||||||||| || |||||||| |||| Sbjct: 335 tgggtcttaaccttctgaggctgctggtacaaaatagaattgctgaattccacaccgagc 394 Query: 531 t 531 | Sbjct: 395 t 395 Score = 54.0 bits (27), Expect = 0.001 Identities = 57/67 (85%) Strand = Plus / Plus Query: 564 cttgcatcaagcacggggttgagctcgagcagtcctttatggagggcgcctacaaccgtg 623 ||||||||||||| | || ||||| ||||| ||||| |||||||| ||||| ||||||| Sbjct: 428 cttgcatcaagcatgcagtagagcttgagcaatccttcatggagggtgcctataaccgtg 487 Query: 624 tgctgag 630 || |||| Sbjct: 488 tgttgag 494 Score = 42.1 bits (21), Expect = 4.3 Identities = 72/89 (80%) Strand = Plus / Plus Query: 329 agggaaatttatgagcatgcagttcttttgagtgtgaaaatggaagatcaagatgcattt 388 ||||| |||||||||||||| ||| || | || || |||| || ||||||||||| ||| Sbjct: 193 agggacatttatgagcatgctgttgttctaagcgtcaaaaccgaggatcaagatgctttt 252 Query: 389 gaaagggacttctgccagctcaagcctta 417 || || || |||| |||||| || ||||| Sbjct: 253 gagagagatttcttccagctgaaacctta 281
>gb|AC009519.4|AC009519 Genomic sequence for Arabidopsis thaliana BAC F1N19 from chromosome I, complete sequence Length = 113172 Score = 65.9 bits (33), Expect = 3e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 471 tggggcttaaccttctgaggctgttggtccagaatagaattgcggagttccacactgagc 530 |||| |||||||||||||||||| |||| || ||||||||||| || |||||||| |||| Sbjct: 25746 tgggtcttaaccttctgaggctgctggtacaaaatagaattgctgaattccacaccgagc 25805 Query: 531 t 531 | Sbjct: 25806 t 25806 Score = 54.0 bits (27), Expect = 0.001 Identities = 57/67 (85%) Strand = Plus / Plus Query: 564 cttgcatcaagcacggggttgagctcgagcagtcctttatggagggcgcctacaaccgtg 623 ||||||||||||| | || ||||| ||||| ||||| |||||||| ||||| ||||||| Sbjct: 25839 cttgcatcaagcatgcagtagagcttgagcaatccttcatggagggtgcctataaccgtg 25898 Query: 624 tgctgag 630 || |||| Sbjct: 25899 tgttgag 25905
>emb|BX816010.1|CNS0ABWV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH22ZE10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 960 Score = 65.9 bits (33), Expect = 3e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 471 tggggcttaaccttctgaggctgttggtccagaatagaattgcggagttccacactgagc 530 |||| |||||||||||||||||| |||| || ||||||||||| || |||||||| |||| Sbjct: 379 tgggtcttaaccttctgaggctgctggtacaaaatagaattgctgaattccacaccgagc 438 Query: 531 t 531 | Sbjct: 439 t 439 Score = 46.1 bits (23), Expect = 0.28 Identities = 56/67 (83%) Strand = Plus / Plus Query: 564 cttgcatcaagcacggggttgagctcgagcagtcctttatggagggcgcctacaaccgtg 623 ||||||||||||| | || ||||| ||| | ||||| |||||||| ||||| ||||||| Sbjct: 472 cttgcatcaagcatgcagtagagcttgagaaatccttcatggagggtgcctataaccgtg 531 Query: 624 tgctgag 630 || |||| Sbjct: 532 tgttgag 538 Score = 42.1 bits (21), Expect = 4.3 Identities = 72/89 (80%) Strand = Plus / Plus Query: 329 agggaaatttatgagcatgcagttcttttgagtgtgaaaatggaagatcaagatgcattt 388 ||||| |||||||||||||| ||| || | || || |||| || ||||||||||| ||| Sbjct: 237 agggacatttatgagcatgctgttgttctaagcgtcaaaaccgaggatcaagatgctttt 296 Query: 389 gaaagggacttctgccagctcaagcctta 417 || || || |||| |||||| || ||||| Sbjct: 297 gagagagatttcttccagctgaaacctta 325
>emb|BX815245.1|CNS0AAGS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS46ZA05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1025 Score = 65.9 bits (33), Expect = 3e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 471 tggggcttaaccttctgaggctgttggtccagaatagaattgcggagttccacactgagc 530 |||| |||||||||||||||||| |||| || ||||||||||| || |||||||| |||| Sbjct: 368 tgggtcttaaccttctgaggctgctggtacaaaatagaattgctgaattccacaccgagc 427 Query: 531 t 531 | Sbjct: 428 t 428 Score = 54.0 bits (27), Expect = 0.001 Identities = 57/67 (85%) Strand = Plus / Plus Query: 564 cttgcatcaagcacggggttgagctcgagcagtcctttatggagggcgcctacaaccgtg 623 ||||||||||||| | || ||||| ||||| ||||| |||||||| ||||| ||||||| Sbjct: 461 cttgcatcaagcatgcagtagagcttgagcaatccttcatggagggtgcctataaccgtg 520 Query: 624 tgctgag 630 || |||| Sbjct: 521 tgttgag 527 Score = 42.1 bits (21), Expect = 4.3 Identities = 72/89 (80%) Strand = Plus / Plus Query: 329 agggaaatttatgagcatgcagttcttttgagtgtgaaaatggaagatcaagatgcattt 388 ||||| |||||||||||||| ||| || | || || |||| || ||||||||||| ||| Sbjct: 226 agggacatttatgagcatgctgttgttctaagcgtcaaaaccgaggatcaagatgctttt 285 Query: 389 gaaagggacttctgccagctcaagcctta 417 || || || |||| |||||| || ||||| Sbjct: 286 gagagagatttcttccagctgaaacctta 314
>gb|DQ869862.1| Camellia sinensis 26S proteasome regulatory particle non-ATPase subunit 12 mRNA, complete cds Length = 1145 Score = 58.0 bits (29), Expect = 7e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 329 agggaaatttatgagcatgcagttcttttgagtgtgaaaatggaagatcaagatgcattt 388 ||||| || ||||||||||| ||| ||||||||||||| || || ||||| ||||| ||| Sbjct: 277 agggatatatatgagcatgctgttgttttgagtgtgaagattgaggatcaggatgccttt 336 Query: 389 gaaagggacttct 401 || ||||| |||| Sbjct: 337 gagagggatttct 349
>dbj|AP004473.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10J15, TM0007, complete sequence Length = 92741 Score = 52.0 bits (26), Expect = 0.004 Identities = 53/62 (85%) Strand = Plus / Minus Query: 359 agtgtgaaaatggaagatcaagatgcatttgaaagggacttctgccagctcaagccttat 418 |||||||||| || ||||||||||| ||||| ||||| |||| |||||| || |||||| Sbjct: 83685 agtgtgaaaactgaggatcaagatgcctttgagagggatttcttccagctgaaaccttat 83626 Query: 419 ta 420 || Sbjct: 83625 ta 83624
>gb|AC113514.9| Mus musculus chromosome 19, clone RP23-475D11, complete sequence Length = 170366 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 261 ccaagttccccagcctccctcc 282 |||||||||||||||||||||| Sbjct: 125636 ccaagttccccagcctccctcc 125657
>gb|AC116128.15| Mus musculus chromosome 19, clone RP23-95H3, complete sequence Length = 228363 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 261 ccaagttccccagcctccctcc 282 |||||||||||||||||||||| Sbjct: 13756 ccaagttccccagcctccctcc 13777
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 178 gttcgaacgcttcaaggcggcc 199 |||||||||||||||||||||| Sbjct: 4901285 gttcgaacgcttcaaggcggcc 4901264 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 893 gcgcccgtcatcaaccagacccttg 917 |||||||||||| |||||||||||| Sbjct: 4808951 gcgcccgtcatcgaccagacccttg 4808975
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 178 gttcgaacgcttcaaggcggcc 199 |||||||||||||||||||||| Sbjct: 4904302 gttcgaacgcttcaaggcggcc 4904281 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 893 gcgcccgtcatcaaccagacccttg 917 |||||||||||| |||||||||||| Sbjct: 4813862 gcgcccgtcatcgaccagacccttg 4813886
>gb|DQ301516.1| Tubocapsicum anomalum LEAFY (LFY) gene, intron II and partial cds Length = 1109 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 983 tttcccatgaagaggtggattattg 1007 |||||||||||||||| |||||||| Sbjct: 370 tttcccatgaagaggtagattattg 346
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 166 ggtgacgcagctgttcgaacgcttc 190 |||||||||| |||||||||||||| Sbjct: 2624545 ggtgacgcagttgttcgaacgcttc 2624521
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 4.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 180 tcgaacgcttcaaggcggcctgcaagcgc 208 ||||||||||| ||||||| ||||||||| Sbjct: 411439 tcgaacgcttcgaggcggcgtgcaagcgc 411411
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 303 acgccgtggaggagctcaagctcgc 327 |||||||||| |||||||||||||| Sbjct: 2316349 acgccgtggatgagctcaagctcgc 2316373
>ref|XM_816110.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510329.260) partial mRNA Length = 4551 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 772 cagctccgacaaggaactgcagcag 796 |||||||||||||||||||| |||| Sbjct: 939 cagctccgacaaggaactgcggcag 963
>ref|XM_809423.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053507257.50) partial mRNA Length = 5997 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 772 cagctccgacaaggaactgcagcag 796 |||||||||||||||||||| |||| Sbjct: 939 cagctccgacaaggaactgcggcag 963 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 772 cagctccgacaaggaactgcagcag 796 |||||||||||||||||||| |||| Sbjct: 1662 cagctccgacaaggaactgcggcag 1686 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 772 cagctccgacaaggaactgcagcag 796 |||||||||||||||||||| |||| Sbjct: 2385 cagctccgacaaggaactgcggcag 2409
>gb|AC104122.2| Homo sapiens chromosome 5 clone RP11-410P18, complete sequence Length = 142636 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 372 aagatcaagatgcatttgaaa 392 ||||||||||||||||||||| Sbjct: 45212 aagatcaagatgcatttgaaa 45192
>emb|AL590398.9| Human DNA sequence from clone RP11-446G24 on chromosome 6 Contains the 5' end of the HDAC2 gene for histone deacetylase 2 (human transcriptional regulator homolog RPD3, YAF1), two putative novel genes, a pseudogene similar to mouse D7Rp2e (DNA segment, Chr7, Roswell Park 2 complex, expressed) and a CpG island, complete sequence Length = 78366 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 950 tttgcctctcttttctttcaa 970 ||||||||||||||||||||| Sbjct: 12937 tttgcctctcttttctttcaa 12917
>emb|AL356234.18| Human DNA sequence from clone RP11-95M15 on chromosome 6 Contains a novel gene and a protein tyrosine phosphatase non-receptor type 11 (Nooan syndrome) (PTPN11) pseudogene, complete sequence Length = 115224 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 376 tcaagatgcatttgaaaggga 396 ||||||||||||||||||||| Sbjct: 56493 tcaagatgcatttgaaaggga 56473
>emb|BX044529.1|CNS096IT Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC18BB03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 608 Score = 42.1 bits (21), Expect = 4.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 515 gagttccacactgagctggagcttctgcccgcc 547 ||||| ||||| ||||||||||| ||||||||| Sbjct: 569 gagtttcacaccgagctggagctgctgcccgcc 537
>emb|BX044528.1|CNS096IS Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC18BB03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 701 Score = 42.1 bits (21), Expect = 4.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 515 gagttccacactgagctggagcttctgcccgcc 547 ||||| ||||| ||||||||||| ||||||||| Sbjct: 479 gagtttcacaccgagctggagctgctgcccgcc 511
>emb|BX043538.1|CNS095RA Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC16AH07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 936 Score = 42.1 bits (21), Expect = 4.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 515 gagttccacactgagctggagcttctgcccgcc 547 ||||| ||||| ||||||||||| ||||||||| Sbjct: 577 gagtttcacaccgagctggagctgctgcccgcc 545
>emb|BX043537.1|CNS095R9 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC16AH07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 951 Score = 42.1 bits (21), Expect = 4.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 515 gagttccacactgagctggagcttctgcccgcc 547 ||||| ||||| ||||||||||| ||||||||| Sbjct: 477 gagtttcacaccgagctggagctgctgcccgcc 509
>emb|BX040987.1|CNS093SF Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC12AE04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 843 Score = 42.1 bits (21), Expect = 4.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 515 gagttccacactgagctggagcttctgcccgcc 547 ||||| ||||| ||||||||||| ||||||||| Sbjct: 449 gagtttcacaccgagctggagctgctgcccgcc 481
>gb|AC027323.5| Homo sapiens chromosome 5 clone CTD-2034A10, complete sequence Length = 140016 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 372 aagatcaagatgcatttgaaa 392 ||||||||||||||||||||| Sbjct: 103937 aagatcaagatgcatttgaaa 103917
>emb|BX031771.1|CNS08WOF Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA47BD06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 970 Score = 42.1 bits (21), Expect = 4.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 515 gagttccacactgagctggagcttctgcccgcc 547 ||||| ||||| ||||||||||| ||||||||| Sbjct: 537 gagtttcacaccgagctggagctgctgcccgcc 505
>emb|BX031770.1|CNS08WOE Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA47BD06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 992 Score = 42.1 bits (21), Expect = 4.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 515 gagttccacactgagctggagcttctgcccgcc 547 ||||| ||||| ||||||||||| ||||||||| Sbjct: 449 gagtttcacaccgagctggagctgctgcccgcc 481
>emb|BX028549.1|CNS08U6X Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA42CF04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 769 Score = 42.1 bits (21), Expect = 4.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 515 gagttccacactgagctggagcttctgcccgcc 547 ||||| ||||| ||||||||||| ||||||||| Sbjct: 543 gagtttcacaccgagctggagctgctgcccgcc 511
>emb|BX028548.1|CNS08U6W Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA42CF04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 909 Score = 42.1 bits (21), Expect = 4.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 515 gagttccacactgagctggagcttctgcccgcc 547 ||||| ||||| ||||||||||| ||||||||| Sbjct: 470 gagtttcacaccgagctggagctgctgcccgcc 502
>emb|BX027525.1|CNS08TEH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA41AG11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1036 Score = 42.1 bits (21), Expect = 4.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 515 gagttccacactgagctggagcttctgcccgcc 547 ||||| ||||| ||||||||||| ||||||||| Sbjct: 551 gagtttcacaccgagctggagctgctgcccgcc 519
>emb|BX027524.1|CNS08TEG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA41AG11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1062 Score = 42.1 bits (21), Expect = 4.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 515 gagttccacactgagctggagcttctgcccgcc 547 ||||| ||||| ||||||||||| ||||||||| Sbjct: 486 gagtttcacaccgagctggagctgctgcccgcc 518
>emb|BX021496.1|CNS08OR0 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA31DE04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1081 Score = 42.1 bits (21), Expect = 4.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 515 gagttccacactgagctggagcttctgcccgcc 547 ||||| ||||| ||||||||||| ||||||||| Sbjct: 500 gagtttcacaccgagctggagctgctgcccgcc 532
>emb|BX006225.1|CNS08CYT Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA10CD01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 956 Score = 42.1 bits (21), Expect = 4.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 515 gagttccacactgagctggagcttctgcccgcc 547 ||||| ||||| ||||||||||| ||||||||| Sbjct: 477 gagtttcacaccgagctggagctgctgcccgcc 445
>emb|BX006224.1|CNS08CYS Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA10CD01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 800 Score = 42.1 bits (21), Expect = 4.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 515 gagttccacactgagctggagcttctgcccgcc 547 ||||| ||||| ||||||||||| ||||||||| Sbjct: 406 gagtttcacaccgagctggagctgctgcccgcc 438
>gb|AC154014.4| Mus musculus 6 BAC RP24-409C18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 161963 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 351 ttcttttgagtgtgaaaatgg 371 ||||||||||||||||||||| Sbjct: 65231 ttcttttgagtgtgaaaatgg 65251
>gb|AC087349.17| Homo sapiens chromosome 8, clone RP11-339A23, complete sequence Length = 96337 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 666 acttcatggaccttctcgcca 686 ||||||||||||||||||||| Sbjct: 48710 acttcatggaccttctcgcca 48730
>emb|AL732474.8| Mouse DNA sequence from clone RP23-180I2 on chromosome 4, complete sequence Length = 151555 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 360 gtgtgaaaatggaagatcaag 380 ||||||||||||||||||||| Sbjct: 65908 gtgtgaaaatggaagatcaag 65888
>emb|AL606917.12| Mouse DNA sequence from clone RP23-25K8 on chromosome 4, complete sequence Length = 52163 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 cctcaccaagttccccagcct 276 ||||||||||||||||||||| Sbjct: 48847 cctcaccaagttccccagcct 48867 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 179,050,328 Number of extensions: 10069870 Number of successful extensions: 204130 Number of sequences better than 10.0: 55 Number of HSP's gapped: 204119 Number of HSP's successfully gapped: 105 Length of query: 1141 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1118 Effective length of database: 18,503,978,556 Effective search space: 20687448025608 Effective search space used: 20687448025608 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)