| Clone Name | FLbaf142g15 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001065494.1| Oryza sativa (japonica cultivar-group) Os07g0164300 (Os07g0164300) mRNA, complete cds Length = 1273 Score = 924 bits (466), Expect = 0.0 Identities = 803/913 (87%), Gaps = 3/913 (0%) Strand = Plus / Plus Query: 62 cgccgccatgaacaacctactcaccgattcatttgagcttcctcggcgggattcctcaag 121 ||||||||||||||| || ||||||||||| |||||||| |||||| | | || ||||| Sbjct: 94 cgccgccatgaacaatctcctcaccgattcgtttgagctccctcggggaggctcttcaag 153 Query: 122 agatggggacgttgaaatgggaatgcatcagcctgatgcttctgataatttaaaaggctt 181 |||||||||| |||||||||||||||| ||| |||| |||| || ||| ||||||| || Sbjct: 154 agatggggacattgaaatgggaatgca--agc-tgatccttcagacaatctaaaaggttt 210 Query: 182 cttgaagaaggttgatggaattgagagcctaatagttaagctgacgaatctcttgactaa 241 |||||| |||||||| | |||||| |||||||| | ||||||||||||||||||| ||| Sbjct: 211 cttgaaaaaggttgacgcaattgaaagcctaattgctaagctgacgaatctcttgcataa 270 Query: 242 gctccagtctgcaaacgaggaatcaaaagcagttacaaaagcaagtgccatgaaagcaat 301 ||| ||| ||||||| |||||||| ||||| |||||||||||||| | |||||||||||| Sbjct: 271 gcttcagactgcaaatgaggaatctaaagcggttacaaaagcaagggacatgaaagcaat 330 Query: 302 taagcagcgaatggagaaagatattgatgaagtggggaaaattgctcgtatggcaaaaac 361 ||| ||| | |||||||||||||||||||||||||||||||| ||||| |||||||| || Sbjct: 331 taaacagaggatggagaaagatattgatgaagtggggaaaatcgctcgcatggcaaagac 390 Query: 362 caaagttgatgaactggaaaaagataacttatctaacaggcagaaacctggatgcgggaa 421 |||||||||||| ||||||||||||||||||| ||||| || || |||||||| ||||| Sbjct: 391 aaaagttgatgaattggaaaaagataacttatcaaacagacaaaagcctggatgtgggaa 450 Query: 422 ggggtctgcagtagatcgatcaagagaacagactactggagcagtcaaaaagaaattgaa 481 || ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 451 aggatctgcggtagatcgatcaagagaacagactactggagcagtgaaaaagaaattgaa 510 Query: 482 ggaacggatggacgattttcaggtattgagagaatcaatccggcaggagtaccgggaagt 541 ||| || ||||| ||||||||||| ||||||||| |||||||||||||||| || || || Sbjct: 511 ggagcgcatggatgattttcaggttttgagagaagcaatccggcaggagtatcgtgatgt 570 Query: 542 tgttgaaagaagggtatttactgtaactggtaatcgccctgatgaagagactattgatga 601 |||||||||||||| ||||| |||||||||| ||| |||||||||||||| |||| | Sbjct: 571 cgttgaaagaagggtgtttacagtaactggtagtcgtcctgatgaagagacagttgacaa 630 Query: 602 tttaatcgagacagggaggagtgagcaaattttcaaagatgctgttcagcagcaggggag 661 |||||| ||||| || || ||||||||||||||| |||| ||| | || |||||||| || Sbjct: 631 tttaatagagactggaagaagtgagcaaattttccaagaagctatccaacagcagggaag 690 Query: 662 aggccaggtattggacactgttgctgagatacaggagcggcatgatgctgtaagagatct 721 |||||| || ||||||||||||| ||||||||||| || || ||||||||||||||||| Sbjct: 691 aggccaaatactggacactgttgcagagatacaggaacgtcacgatgctgtaagagatct 750 Query: 722 agagaggaagcttctggagttacagcagatattcctggatatggcagtactggttgaggc 781 ||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||| || Sbjct: 751 agagaggaagcttctggagttgcagcagatattcatggatatggcagttttggttgatgc 810 Query: 782 tcaaggagacatgatcaaccacatagagacacatgtttcaaatgctaccaaccacataca 841 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 811 tcaaggagacatgatcaacaacatagagacacatgtttcaaatgctaccaaccacataca 870 Query: 842 acaaggtgtgggcgctctccagaacgcaaagaagctgcagaagaactcgagaaagtggat 901 |||||| || | ||||| |||||||| |||||||| ||||||||||| || |||||||| Sbjct: 871 acaaggcgtcagtgctctacagaacgcgaagaagctccagaagaactccaggaagtggat 930 Query: 902 gtgctacgccatcatccttctcctggtgatagtggttatcatcgtggttgcggttatcca 961 |||||||||||||||||| || || | |||||||| ||||| || || || || ||||| Sbjct: 931 gtgctacgccatcatcctcctgctcatcatagtggtgatcattgtcgtcgccgtcatcca 990 Query: 962 gccatggaagaag 974 ||||||||||||| Sbjct: 991 gccatggaagaag 1003
>dbj|AK099351.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030B17, full insert sequence Length = 1275 Score = 924 bits (466), Expect = 0.0 Identities = 803/913 (87%), Gaps = 3/913 (0%) Strand = Plus / Plus Query: 62 cgccgccatgaacaacctactcaccgattcatttgagcttcctcggcgggattcctcaag 121 ||||||||||||||| || ||||||||||| |||||||| |||||| | | || ||||| Sbjct: 96 cgccgccatgaacaatctcctcaccgattcgtttgagctccctcggggaggctcttcaag 155 Query: 122 agatggggacgttgaaatgggaatgcatcagcctgatgcttctgataatttaaaaggctt 181 |||||||||| |||||||||||||||| ||| |||| |||| || ||| ||||||| || Sbjct: 156 agatggggacattgaaatgggaatgca--agc-tgatccttcagacaatctaaaaggttt 212 Query: 182 cttgaagaaggttgatggaattgagagcctaatagttaagctgacgaatctcttgactaa 241 |||||| |||||||| | |||||| |||||||| | ||||||||||||||||||| ||| Sbjct: 213 cttgaaaaaggttgacgcaattgaaagcctaattgctaagctgacgaatctcttgcataa 272 Query: 242 gctccagtctgcaaacgaggaatcaaaagcagttacaaaagcaagtgccatgaaagcaat 301 ||| ||| ||||||| |||||||| ||||| |||||||||||||| | |||||||||||| Sbjct: 273 gcttcagactgcaaatgaggaatctaaagcggttacaaaagcaagggacatgaaagcaat 332 Query: 302 taagcagcgaatggagaaagatattgatgaagtggggaaaattgctcgtatggcaaaaac 361 ||| ||| | |||||||||||||||||||||||||||||||| ||||| |||||||| || Sbjct: 333 taaacagaggatggagaaagatattgatgaagtggggaaaatcgctcgcatggcaaagac 392 Query: 362 caaagttgatgaactggaaaaagataacttatctaacaggcagaaacctggatgcgggaa 421 |||||||||||| ||||||||||||||||||| ||||| || || |||||||| ||||| Sbjct: 393 aaaagttgatgaattggaaaaagataacttatcaaacagacaaaagcctggatgtgggaa 452 Query: 422 ggggtctgcagtagatcgatcaagagaacagactactggagcagtcaaaaagaaattgaa 481 || ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 453 aggatctgcggtagatcgatcaagagaacagactactggagcagtgaaaaagaaattgaa 512 Query: 482 ggaacggatggacgattttcaggtattgagagaatcaatccggcaggagtaccgggaagt 541 ||| || ||||| ||||||||||| ||||||||| |||||||||||||||| || || || Sbjct: 513 ggagcgcatggatgattttcaggttttgagagaagcaatccggcaggagtatcgtgatgt 572 Query: 542 tgttgaaagaagggtatttactgtaactggtaatcgccctgatgaagagactattgatga 601 |||||||||||||| ||||| |||||||||| ||| |||||||||||||| |||| | Sbjct: 573 cgttgaaagaagggtgtttacagtaactggtagtcgtcctgatgaagagacagttgacaa 632 Query: 602 tttaatcgagacagggaggagtgagcaaattttcaaagatgctgttcagcagcaggggag 661 |||||| ||||| || || ||||||||||||||| |||| ||| | || |||||||| || Sbjct: 633 tttaatagagactggaagaagtgagcaaattttccaagaagctatccaacagcagggaag 692 Query: 662 aggccaggtattggacactgttgctgagatacaggagcggcatgatgctgtaagagatct 721 |||||| || ||||||||||||| ||||||||||| || || ||||||||||||||||| Sbjct: 693 aggccaaatactggacactgttgcagagatacaggaacgtcacgatgctgtaagagatct 752 Query: 722 agagaggaagcttctggagttacagcagatattcctggatatggcagtactggttgaggc 781 ||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||| || Sbjct: 753 agagaggaagcttctggagttgcagcagatattcatggatatggcagttttggttgatgc 812 Query: 782 tcaaggagacatgatcaaccacatagagacacatgtttcaaatgctaccaaccacataca 841 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 813 tcaaggagacatgatcaacaacatagagacacatgtttcaaatgctaccaaccacataca 872 Query: 842 acaaggtgtgggcgctctccagaacgcaaagaagctgcagaagaactcgagaaagtggat 901 |||||| || | ||||| |||||||| |||||||| ||||||||||| || |||||||| Sbjct: 873 acaaggcgtcagtgctctacagaacgcgaagaagctccagaagaactccaggaagtggat 932 Query: 902 gtgctacgccatcatccttctcctggtgatagtggttatcatcgtggttgcggttatcca 961 |||||||||||||||||| || || | |||||||| ||||| || || || || ||||| Sbjct: 933 gtgctacgccatcatcctcctgctcatcatagtggtgatcattgtcgtcgccgtcatcca 992 Query: 962 gccatggaagaag 974 ||||||||||||| Sbjct: 993 gccatggaagaag 1005
>dbj|AK073327.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030B18, full insert sequence Length = 1275 Score = 924 bits (466), Expect = 0.0 Identities = 803/913 (87%), Gaps = 3/913 (0%) Strand = Plus / Plus Query: 62 cgccgccatgaacaacctactcaccgattcatttgagcttcctcggcgggattcctcaag 121 ||||||||||||||| || ||||||||||| |||||||| |||||| | | || ||||| Sbjct: 96 cgccgccatgaacaatctcctcaccgattcgtttgagctccctcggggaggctcttcaag 155 Query: 122 agatggggacgttgaaatgggaatgcatcagcctgatgcttctgataatttaaaaggctt 181 |||||||||| |||||||||||||||| ||| |||| |||| || ||| ||||||| || Sbjct: 156 agatggggacattgaaatgggaatgca--agc-tgatccttcagacaatctaaaaggttt 212 Query: 182 cttgaagaaggttgatggaattgagagcctaatagttaagctgacgaatctcttgactaa 241 |||||| |||||||| | |||||| |||||||| | ||||||||||||||||||| ||| Sbjct: 213 cttgaaaaaggttgacgcaattgaaagcctaattgctaagctgacgaatctcttgcataa 272 Query: 242 gctccagtctgcaaacgaggaatcaaaagcagttacaaaagcaagtgccatgaaagcaat 301 ||| ||| ||||||| |||||||| ||||| |||||||||||||| | |||||||||||| Sbjct: 273 gcttcagactgcaaatgaggaatctaaagcggttacaaaagcaagggacatgaaagcaat 332 Query: 302 taagcagcgaatggagaaagatattgatgaagtggggaaaattgctcgtatggcaaaaac 361 ||| ||| | |||||||||||||||||||||||||||||||| ||||| |||||||| || Sbjct: 333 taaacagaggatggagaaagatattgatgaagtggggaaaatcgctcgcatggcaaagac 392 Query: 362 caaagttgatgaactggaaaaagataacttatctaacaggcagaaacctggatgcgggaa 421 |||||||||||| ||||||||||||||||||| ||||| || || |||||||| ||||| Sbjct: 393 aaaagttgatgaattggaaaaagataacttatcaaacagacaaaagcctggatgtgggaa 452 Query: 422 ggggtctgcagtagatcgatcaagagaacagactactggagcagtcaaaaagaaattgaa 481 || ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 453 aggatctgcggtagatcgatcaagagaacagactactggagcagtgaaaaagaaattgaa 512 Query: 482 ggaacggatggacgattttcaggtattgagagaatcaatccggcaggagtaccgggaagt 541 ||| || ||||| ||||||||||| ||||||||| |||||||||||||||| || || || Sbjct: 513 ggagcgcatggatgattttcaggttttgagagaagcaatccggcaggagtatcgtgatgt 572 Query: 542 tgttgaaagaagggtatttactgtaactggtaatcgccctgatgaagagactattgatga 601 |||||||||||||| ||||| |||||||||| ||| |||||||||||||| |||| | Sbjct: 573 cgttgaaagaagggtgtttacagtaactggtagtcgtcctgatgaagagacagttgacaa 632 Query: 602 tttaatcgagacagggaggagtgagcaaattttcaaagatgctgttcagcagcaggggag 661 |||||| ||||| || || ||||||||||||||| |||| ||| | || |||||||| || Sbjct: 633 tttaatagagactggaagaagtgagcaaattttccaagaagctatccaacagcagggaag 692 Query: 662 aggccaggtattggacactgttgctgagatacaggagcggcatgatgctgtaagagatct 721 |||||| || ||||||||||||| ||||||||||| || || ||||||||||||||||| Sbjct: 693 aggccaaatactggacactgttgcagagatacaggaacgtcacgatgctgtaagagatct 752 Query: 722 agagaggaagcttctggagttacagcagatattcctggatatggcagtactggttgaggc 781 ||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||| || Sbjct: 753 agagaggaagcttctggagttgcagcagatattcatggatatggcagttttggttgatgc 812 Query: 782 tcaaggagacatgatcaaccacatagagacacatgtttcaaatgctaccaaccacataca 841 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 813 tcaaggagacatgatcaacaacatagagacacatgtttcaaatgctaccaaccacataca 872 Query: 842 acaaggtgtgggcgctctccagaacgcaaagaagctgcagaagaactcgagaaagtggat 901 |||||| || | ||||| |||||||| |||||||| ||||||||||| || |||||||| Sbjct: 873 acaaggcgtcagtgctctacagaacgcgaagaagctccagaagaactccaggaagtggat 932 Query: 902 gtgctacgccatcatccttctcctggtgatagtggttatcatcgtggttgcggttatcca 961 |||||||||||||||||| || || | |||||||| ||||| || || || || ||||| Sbjct: 933 gtgctacgccatcatcctcctgctcatcatagtggtgatcattgtcgtcgccgtcatcca 992 Query: 962 gccatggaagaag 974 ||||||||||||| Sbjct: 993 gccatggaagaag 1005
>gb|AY224573.1| Oryza sativa (japonica cultivar-group) isolate 29959 syntaxin-like protein mRNA, partial cds Length = 471 Score = 446 bits (225), Expect = e-122 Identities = 389/442 (88%), Gaps = 3/442 (0%) Strand = Plus / Plus Query: 62 cgccgccatgaacaacctactcaccgattcatttgagcttcctcggcgggattcctcaag 121 ||||||||||||||| || ||||||||||| |||||||| |||||| | | || ||||| Sbjct: 33 cgccgccatgaacaatctcctcaccgattcgtttgagctccctcggggaggctcttcaag 92 Query: 122 agatggggacgttgaaatgggaatgcatcagcctgatgcttctgataatttaaaaggctt 181 |||||||||| |||||||||||||||| ||| |||| |||| || ||| ||||||| || Sbjct: 93 agatggggacattgaaatgggaatgca--agc-tgatccttcagacaatctaaaaggttt 149 Query: 182 cttgaagaaggttgatggaattgagagcctaatagttaagctgacgaatctcttgactaa 241 |||||| |||||||| | |||||| |||||||| | ||||||||||||||||||| ||| Sbjct: 150 cttgaaaaaggttgacgcaattgaaagcctaattgctaagctgacgaatctcttgcataa 209 Query: 242 gctccagtctgcaaacgaggaatcaaaagcagttacaaaagcaagtgccatgaaagcaat 301 ||| ||| ||||||| |||||||| ||||| |||||||||||||| | |||||||||||| Sbjct: 210 gcttcagactgcaaatgaggaatctaaagcggttacaaaagcaagggacatgaaagcaat 269 Query: 302 taagcagcgaatggagaaagatattgatgaagtggggaaaattgctcgtatggcaaaaac 361 ||| ||| | |||||||||||||||||||||||||||||||| ||||| |||||||| || Sbjct: 270 taaacagaggatggagaaagatattgatgaagtggggaaaatcgctcgcatggcaaagac 329 Query: 362 caaagttgatgaactggaaaaagataacttatctaacaggcagaaacctggatgcgggaa 421 |||||||||||| ||||||||||||||||||| ||||| || || |||||||| ||||| Sbjct: 330 maaagttgatgaattggaaaaagataacttatcaaacagacaaaagcctggatgtgggaa 389 Query: 422 ggggtctgcagtagatcgatcaagagaacagactactggagcagtcaaaaagaaattgaa 481 || ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 390 aggatctgcggtagatcgatcaagagaacagactactggagcagtgaaaaagaaattgaa 449 Query: 482 ggaacggatggacgattttcag 503 ||| || ||||| ||||||||| Sbjct: 450 ggagcgcatggatgattttcag 471
>emb|CT828984.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA037P02, full insert sequence Length = 1309 Score = 157 bits (79), Expect = 1e-34 Identities = 139/159 (87%) Strand = Plus / Minus Query: 816 gtttcaaatgctaccaaccacatacaacaaggtgtgggcgctctccagaacgcaaagaag 875 |||||||||||||||||||||||||||||||| || | ||||| |||||||| |||||| Sbjct: 838 gtttcaaatgctaccaaccacatacaacaaggcgtcagtgctctacagaacgcgaagaag 779 Query: 876 ctgcagaagaactcgagaaagtggatgtgctacgccatcatccttctcctggtgatagtg 935 || ||||||||||| || |||||||||||||||||||||||||| || || | |||||| Sbjct: 778 ctccagaagaactccaggaagtggatgtgctacgccatcatcctcctgctcatcatagtg 719 Query: 936 gttatcatcgtggttgcggttatccagccatggaagaag 974 || ||||| || || || || |||||||||||||||||| Sbjct: 718 gtgatcattgtcgtcgccgtcatccagccatggaagaag 680 Score = 113 bits (57), Expect = 2e-21 Identities = 72/77 (93%) Strand = Plus / Minus Query: 673 tggacactgttgctgagatacaggagcggcatgatgctgtaagagatctagagaggaagc 732 ||||||||||||| ||||||||||| || || |||||||||||||||||||||||||||| Sbjct: 1191 tggacactgttgcagagatacaggaacgtcacgatgctgtaagagatctagagaggaagc 1132 Query: 733 ttctggagttacagcag 749 |||||||||| |||||| Sbjct: 1131 ttctggagttgcagcag 1115 Score = 99.6 bits (50), Expect = 2e-17 Identities = 65/70 (92%) Strand = Plus / Minus Query: 748 agatattcctggatatggcagtactggttgaggctcaaggagacatgatcaaccacatag 807 |||||||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||| Sbjct: 1009 agatattcatggatatggcagttttggttgatgctcaaggagacatgatcaacaacatag 950 Query: 808 agacacatgt 817 |||||||||| Sbjct: 949 agacacatgt 940
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 157 bits (79), Expect = 1e-34 Identities = 139/159 (87%) Strand = Plus / Minus Query: 816 gtttcaaatgctaccaaccacatacaacaaggtgtgggcgctctccagaacgcaaagaag 875 |||||||||||||||||||||||||||||||| || | ||||| |||||||| |||||| Sbjct: 3478923 gtttcaaatgctaccaaccacatacaacaaggcgtcagtgctctacagaacgcgaagaag 3478864 Query: 876 ctgcagaagaactcgagaaagtggatgtgctacgccatcatccttctcctggtgatagtg 935 || ||||||||||| || |||||||||||||||||||||||||| || || | |||||| Sbjct: 3478863 ctccagaagaactccaggaagtggatgtgctacgccatcatcctcctgctcatcatagtg 3478804 Query: 936 gttatcatcgtggttgcggttatccagccatggaagaag 974 || ||||| || || || || |||||||||||||||||| Sbjct: 3478803 gtgatcattgtcgtcgccgtcatccagccatggaagaag 3478765 Score = 117 bits (59), Expect = 1e-22 Identities = 83/91 (91%) Strand = Plus / Minus Query: 296 agcaattaagcagcgaatggagaaagatattgatgaagtggggaaaattgctcgtatggc 355 ||||||||| ||| | |||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 3480777 agcaattaaacagaggatggagaaagatattgatgaagtggggaaaatcgctcgcatggc 3480718 Query: 356 aaaaaccaaagttgatgaactggaaaaagat 386 ||| || |||||||||||| ||||||||||| Sbjct: 3480717 aaagacaaaagttgatgaattggaaaaagat 3480687 Score = 113 bits (57), Expect = 2e-21 Identities = 72/77 (93%) Strand = Plus / Minus Query: 673 tggacactgttgctgagatacaggagcggcatgatgctgtaagagatctagagaggaagc 732 ||||||||||||| ||||||||||| || || |||||||||||||||||||||||||||| Sbjct: 3479276 tggacactgttgcagagatacaggaacgtcacgatgctgtaagagatctagagaggaagc 3479217 Query: 733 ttctggagttacagcag 749 |||||||||| |||||| Sbjct: 3479216 ttctggagttgcagcag 3479200 Score = 99.6 bits (50), Expect = 2e-17 Identities = 65/70 (92%) Strand = Plus / Minus Query: 748 agatattcctggatatggcagtactggttgaggctcaaggagacatgatcaaccacatag 807 |||||||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||| Sbjct: 3479094 agatattcatggatatggcagttttggttgatgctcaaggagacatgatcaacaacatag 3479035 Query: 808 agacacatgt 817 |||||||||| Sbjct: 3479034 agacacatgt 3479025 Score = 97.6 bits (49), Expect = 9e-17 Identities = 79/89 (88%) Strand = Plus / Minus Query: 502 aggtattgagagaatcaatccggcaggagtaccgggaagttgttgaaagaagggtattta 561 |||| ||||||||| |||||||||||||||| || || || |||||||||||||| |||| Sbjct: 3479713 aggttttgagagaagcaatccggcaggagtatcgtgatgtcgttgaaagaagggtgttta 3479654 Query: 562 ctgtaactggtaatcgccctgatgaagag 590 | |||||||||| ||| |||||||||||| Sbjct: 3479653 cagtaactggtagtcgtcctgatgaagag 3479625 Score = 83.8 bits (42), Expect = 1e-12 Identities = 66/74 (89%) Strand = Plus / Minus Query: 387 aacttatctaacaggcagaaacctggatgcgggaaggggtctgcagtagatcgatcaaga 446 |||||||| ||||| || || |||||||| ||||| || ||||| ||||||||||||||| Sbjct: 3480339 aacttatcaaacagacaaaagcctggatgtgggaaaggatctgcggtagatcgatcaaga 3480280 Query: 447 gaacagactactgg 460 |||||||||||||| Sbjct: 3480279 gaacagactactgg 3480266 Score = 63.9 bits (32), Expect = 1e-06 Identities = 47/52 (90%) Strand = Plus / Minus Query: 460 gagcagtcaaaaagaaattgaaggaacggatggacgattttcaggtattgag 511 ||||||| ||||||||||||||||| || ||||| |||||||||||| |||| Sbjct: 3480170 gagcagtgaaaaagaaattgaaggagcgcatggatgattttcaggtactgag 3480119 Score = 63.9 bits (32), Expect = 1e-06 Identities = 90/107 (84%), Gaps = 3/107 (2%) Strand = Plus / Minus Query: 87 gattcatttgagcttcctcggcgggattcctcaagagatggggacgttgaaatgggaatg 146 ||||| |||||||| |||||| | | || ||||||||||||||| |||||||||||||| Sbjct: 3481357 gattcgtttgagctccctcggggaggctcttcaagagatggggacattgaaatgggaatg 3481298 Query: 147 catcagcctgatgcttctgataatttaaaaggcttcttgaagaaggt 193 || || ||||| |||| || ||| ||||||| |||||||| ||||| Sbjct: 3481297 ca--ag-ctgatccttcagacaatctaaaaggtttcttgaaaaaggt 3481254 Score = 56.0 bits (28), Expect = 3e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 601 atttaatcgagacagggaggagtgagcaaattttcaaagatgctgttcagcagcagggga 660 ||||||| ||||| || || ||||||||||||||| |||| ||| | || |||||||| | Sbjct: 3479469 atttaatagagactggaagaagtgagcaaattttccaagaagctatccaacagcagggaa 3479410 Query: 661 gaggccaggtat 672 ||||||| |||| Sbjct: 3479409 gaggccaagtat 3479398 Score = 56.0 bits (28), Expect = 3e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 250 ctgcaaacgaggaatcaaaagcagttacaaaagcaagtgccatgaaag 297 ||||||| |||||||| ||||| |||||||||||||| | |||||||| Sbjct: 3480925 ctgcaaatgaggaatctaaagcggttacaaaagcaagggacatgaaag 3480878 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Minus Query: 190 aggttgatggaattgagagcctaatagttaagctgacgaatctcttg 236 ||||||| | |||||| |||||||| | ||||||||||||||||||| Sbjct: 3481148 aggttgacgcaattgaaagcctaattgctaagctgacgaatctcttg 3481102 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 307 agcgaatggagaaagatattgatgaagtggggaaaatt 344 |||| |||||||||||||| ||||||| ||||||||| Sbjct: 20635632 agcgcatggagaaagatatcaatgaagttgggaaaatt 20635669
>dbj|AP004664.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0428D12 Length = 141678 Score = 157 bits (79), Expect = 1e-34 Identities = 139/159 (87%) Strand = Plus / Minus Query: 816 gtttcaaatgctaccaaccacatacaacaaggtgtgggcgctctccagaacgcaaagaag 875 |||||||||||||||||||||||||||||||| || | ||||| |||||||| |||||| Sbjct: 118743 gtttcaaatgctaccaaccacatacaacaaggcgtcagtgctctacagaacgcgaagaag 118684 Query: 876 ctgcagaagaactcgagaaagtggatgtgctacgccatcatccttctcctggtgatagtg 935 || ||||||||||| || |||||||||||||||||||||||||| || || | |||||| Sbjct: 118683 ctccagaagaactccaggaagtggatgtgctacgccatcatcctcctgctcatcatagtg 118624 Query: 936 gttatcatcgtggttgcggttatccagccatggaagaag 974 || ||||| || || || || |||||||||||||||||| Sbjct: 118623 gtgatcattgtcgtcgccgtcatccagccatggaagaag 118585 Score = 117 bits (59), Expect = 1e-22 Identities = 83/91 (91%) Strand = Plus / Minus Query: 296 agcaattaagcagcgaatggagaaagatattgatgaagtggggaaaattgctcgtatggc 355 ||||||||| ||| | |||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 120597 agcaattaaacagaggatggagaaagatattgatgaagtggggaaaatcgctcgcatggc 120538 Query: 356 aaaaaccaaagttgatgaactggaaaaagat 386 ||| || |||||||||||| ||||||||||| Sbjct: 120537 aaagacaaaagttgatgaattggaaaaagat 120507 Score = 113 bits (57), Expect = 2e-21 Identities = 72/77 (93%) Strand = Plus / Minus Query: 673 tggacactgttgctgagatacaggagcggcatgatgctgtaagagatctagagaggaagc 732 ||||||||||||| ||||||||||| || || |||||||||||||||||||||||||||| Sbjct: 119096 tggacactgttgcagagatacaggaacgtcacgatgctgtaagagatctagagaggaagc 119037 Query: 733 ttctggagttacagcag 749 |||||||||| |||||| Sbjct: 119036 ttctggagttgcagcag 119020 Score = 99.6 bits (50), Expect = 2e-17 Identities = 65/70 (92%) Strand = Plus / Minus Query: 748 agatattcctggatatggcagtactggttgaggctcaaggagacatgatcaaccacatag 807 |||||||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||| Sbjct: 118914 agatattcatggatatggcagttttggttgatgctcaaggagacatgatcaacaacatag 118855 Query: 808 agacacatgt 817 |||||||||| Sbjct: 118854 agacacatgt 118845 Score = 97.6 bits (49), Expect = 9e-17 Identities = 79/89 (88%) Strand = Plus / Minus Query: 502 aggtattgagagaatcaatccggcaggagtaccgggaagttgttgaaagaagggtattta 561 |||| ||||||||| |||||||||||||||| || || || |||||||||||||| |||| Sbjct: 119533 aggttttgagagaagcaatccggcaggagtatcgtgatgtcgttgaaagaagggtgttta 119474 Query: 562 ctgtaactggtaatcgccctgatgaagag 590 | |||||||||| ||| |||||||||||| Sbjct: 119473 cagtaactggtagtcgtcctgatgaagag 119445 Score = 83.8 bits (42), Expect = 1e-12 Identities = 66/74 (89%) Strand = Plus / Minus Query: 387 aacttatctaacaggcagaaacctggatgcgggaaggggtctgcagtagatcgatcaaga 446 |||||||| ||||| || || |||||||| ||||| || ||||| ||||||||||||||| Sbjct: 120159 aacttatcaaacagacaaaagcctggatgtgggaaaggatctgcggtagatcgatcaaga 120100 Query: 447 gaacagactactgg 460 |||||||||||||| Sbjct: 120099 gaacagactactgg 120086 Score = 63.9 bits (32), Expect = 1e-06 Identities = 47/52 (90%) Strand = Plus / Minus Query: 460 gagcagtcaaaaagaaattgaaggaacggatggacgattttcaggtattgag 511 ||||||| ||||||||||||||||| || ||||| |||||||||||| |||| Sbjct: 119990 gagcagtgaaaaagaaattgaaggagcgcatggatgattttcaggtactgag 119939 Score = 63.9 bits (32), Expect = 1e-06 Identities = 90/107 (84%), Gaps = 3/107 (2%) Strand = Plus / Minus Query: 87 gattcatttgagcttcctcggcgggattcctcaagagatggggacgttgaaatgggaatg 146 ||||| |||||||| |||||| | | || ||||||||||||||| |||||||||||||| Sbjct: 121177 gattcgtttgagctccctcggggaggctcttcaagagatggggacattgaaatgggaatg 121118 Query: 147 catcagcctgatgcttctgataatttaaaaggcttcttgaagaaggt 193 || || ||||| |||| || ||| ||||||| |||||||| ||||| Sbjct: 121117 ca--ag-ctgatccttcagacaatctaaaaggtttcttgaaaaaggt 121074 Score = 56.0 bits (28), Expect = 3e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 601 atttaatcgagacagggaggagtgagcaaattttcaaagatgctgttcagcagcagggga 660 ||||||| ||||| || || ||||||||||||||| |||| ||| | || |||||||| | Sbjct: 119289 atttaatagagactggaagaagtgagcaaattttccaagaagctatccaacagcagggaa 119230 Query: 661 gaggccaggtat 672 ||||||| |||| Sbjct: 119229 gaggccaagtat 119218 Score = 56.0 bits (28), Expect = 3e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 250 ctgcaaacgaggaatcaaaagcagttacaaaagcaagtgccatgaaag 297 ||||||| |||||||| ||||| |||||||||||||| | |||||||| Sbjct: 120745 ctgcaaatgaggaatctaaagcggttacaaaagcaagggacatgaaag 120698 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Minus Query: 190 aggttgatggaattgagagcctaatagttaagctgacgaatctcttg 236 ||||||| | |||||| |||||||| | ||||||||||||||||||| Sbjct: 120968 aggttgacgcaattgaaagcctaattgctaagctgacgaatctcttg 120922
>dbj|AP004267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0039H02 Length = 169162 Score = 157 bits (79), Expect = 1e-34 Identities = 139/159 (87%) Strand = Plus / Minus Query: 816 gtttcaaatgctaccaaccacatacaacaaggtgtgggcgctctccagaacgcaaagaag 875 |||||||||||||||||||||||||||||||| || | ||||| |||||||| |||||| Sbjct: 16873 gtttcaaatgctaccaaccacatacaacaaggcgtcagtgctctacagaacgcgaagaag 16814 Query: 876 ctgcagaagaactcgagaaagtggatgtgctacgccatcatccttctcctggtgatagtg 935 || ||||||||||| || |||||||||||||||||||||||||| || || | |||||| Sbjct: 16813 ctccagaagaactccaggaagtggatgtgctacgccatcatcctcctgctcatcatagtg 16754 Query: 936 gttatcatcgtggttgcggttatccagccatggaagaag 974 || ||||| || || || || |||||||||||||||||| Sbjct: 16753 gtgatcattgtcgtcgccgtcatccagccatggaagaag 16715 Score = 117 bits (59), Expect = 1e-22 Identities = 83/91 (91%) Strand = Plus / Minus Query: 296 agcaattaagcagcgaatggagaaagatattgatgaagtggggaaaattgctcgtatggc 355 ||||||||| ||| | |||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 18727 agcaattaaacagaggatggagaaagatattgatgaagtggggaaaatcgctcgcatggc 18668 Query: 356 aaaaaccaaagttgatgaactggaaaaagat 386 ||| || |||||||||||| ||||||||||| Sbjct: 18667 aaagacaaaagttgatgaattggaaaaagat 18637 Score = 113 bits (57), Expect = 2e-21 Identities = 72/77 (93%) Strand = Plus / Minus Query: 673 tggacactgttgctgagatacaggagcggcatgatgctgtaagagatctagagaggaagc 732 ||||||||||||| ||||||||||| || || |||||||||||||||||||||||||||| Sbjct: 17226 tggacactgttgcagagatacaggaacgtcacgatgctgtaagagatctagagaggaagc 17167 Query: 733 ttctggagttacagcag 749 |||||||||| |||||| Sbjct: 17166 ttctggagttgcagcag 17150 Score = 99.6 bits (50), Expect = 2e-17 Identities = 65/70 (92%) Strand = Plus / Minus Query: 748 agatattcctggatatggcagtactggttgaggctcaaggagacatgatcaaccacatag 807 |||||||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||| Sbjct: 17044 agatattcatggatatggcagttttggttgatgctcaaggagacatgatcaacaacatag 16985 Query: 808 agacacatgt 817 |||||||||| Sbjct: 16984 agacacatgt 16975 Score = 97.6 bits (49), Expect = 9e-17 Identities = 79/89 (88%) Strand = Plus / Minus Query: 502 aggtattgagagaatcaatccggcaggagtaccgggaagttgttgaaagaagggtattta 561 |||| ||||||||| |||||||||||||||| || || || |||||||||||||| |||| Sbjct: 17663 aggttttgagagaagcaatccggcaggagtatcgtgatgtcgttgaaagaagggtgttta 17604 Query: 562 ctgtaactggtaatcgccctgatgaagag 590 | |||||||||| ||| |||||||||||| Sbjct: 17603 cagtaactggtagtcgtcctgatgaagag 17575 Score = 83.8 bits (42), Expect = 1e-12 Identities = 66/74 (89%) Strand = Plus / Minus Query: 387 aacttatctaacaggcagaaacctggatgcgggaaggggtctgcagtagatcgatcaaga 446 |||||||| ||||| || || |||||||| ||||| || ||||| ||||||||||||||| Sbjct: 18289 aacttatcaaacagacaaaagcctggatgtgggaaaggatctgcggtagatcgatcaaga 18230 Query: 447 gaacagactactgg 460 |||||||||||||| Sbjct: 18229 gaacagactactgg 18216 Score = 63.9 bits (32), Expect = 1e-06 Identities = 47/52 (90%) Strand = Plus / Minus Query: 460 gagcagtcaaaaagaaattgaaggaacggatggacgattttcaggtattgag 511 ||||||| ||||||||||||||||| || ||||| |||||||||||| |||| Sbjct: 18120 gagcagtgaaaaagaaattgaaggagcgcatggatgattttcaggtactgag 18069 Score = 63.9 bits (32), Expect = 1e-06 Identities = 90/107 (84%), Gaps = 3/107 (2%) Strand = Plus / Minus Query: 87 gattcatttgagcttcctcggcgggattcctcaagagatggggacgttgaaatgggaatg 146 ||||| |||||||| |||||| | | || ||||||||||||||| |||||||||||||| Sbjct: 19307 gattcgtttgagctccctcggggaggctcttcaagagatggggacattgaaatgggaatg 19248 Query: 147 catcagcctgatgcttctgataatttaaaaggcttcttgaagaaggt 193 || || ||||| |||| || ||| ||||||| |||||||| ||||| Sbjct: 19247 ca--ag-ctgatccttcagacaatctaaaaggtttcttgaaaaaggt 19204 Score = 56.0 bits (28), Expect = 3e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 601 atttaatcgagacagggaggagtgagcaaattttcaaagatgctgttcagcagcagggga 660 ||||||| ||||| || || ||||||||||||||| |||| ||| | || |||||||| | Sbjct: 17419 atttaatagagactggaagaagtgagcaaattttccaagaagctatccaacagcagggaa 17360 Query: 661 gaggccaggtat 672 ||||||| |||| Sbjct: 17359 gaggccaagtat 17348 Score = 56.0 bits (28), Expect = 3e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 250 ctgcaaacgaggaatcaaaagcagttacaaaagcaagtgccatgaaag 297 ||||||| |||||||| ||||| |||||||||||||| | |||||||| Sbjct: 18875 ctgcaaatgaggaatctaaagcggttacaaaagcaagggacatgaaag 18828 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Minus Query: 190 aggttgatggaattgagagcctaatagttaagctgacgaatctcttg 236 ||||||| | |||||| |||||||| | ||||||||||||||||||| Sbjct: 19098 aggttgacgcaattgaaagcctaattgctaagctgacgaatctcttg 19052
>dbj|AK107096.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-H07, full insert sequence Length = 1903 Score = 157 bits (79), Expect = 1e-34 Identities = 139/159 (87%) Strand = Plus / Minus Query: 816 gtttcaaatgctaccaaccacatacaacaaggtgtgggcgctctccagaacgcaaagaag 875 |||||||||||||||||||||||||||||||| || | ||||| |||||||| |||||| Sbjct: 1809 gtttcaaatgctaccaaccacatacaacaaggcgtcagtgctctacagaacgcgaagaag 1750 Query: 876 ctgcagaagaactcgagaaagtggatgtgctacgccatcatccttctcctggtgatagtg 935 || ||||||||||| || |||||||||||||||||||||||||| || || | |||||| Sbjct: 1749 ctccagaagaactccaggaagtggatgtgctacgccatcatcctcctgctcatcatagtg 1690 Query: 936 gttatcatcgtggttgcggttatccagccatggaagaag 974 || ||||| || || || || |||||||||||||||||| Sbjct: 1689 gtgatcattgtcgtcgccgtcatccagccatggaagaag 1651
>gb|BT013221.1| Lycopersicon esculentum clone 134437F, mRNA sequence Length = 1336 Score = 93.7 bits (47), Expect = 1e-15 Identities = 86/99 (86%) Strand = Plus / Plus Query: 696 gagcggcatgatgctgtaagagatctagagaggaagcttctggagttacagcagatattc 755 ||||| |||||||| || ||||| |||||||||||||||| ||||| || ||||||||| Sbjct: 738 gagcgccatgatgcagttagagaattagagaggaagcttcttgagttgcaacagatattc 797 Query: 756 ctggatatggcagtactggttgaggctcaaggagacatg 794 ||||| || ||||| ||||||| ||||||||||||||| Sbjct: 798 ctggacatagcagtgttggttgatgctcaaggagacatg 836 Score = 87.7 bits (44), Expect = 9e-14 Identities = 80/92 (86%) Strand = Plus / Plus Query: 258 gaggaatcaaaagcagttacaaaagcaagtgccatgaaagcaattaagcagcgaatggag 317 ||||||||||| || ||||||||||| ||| |||||||||||||||||||| ||||| Sbjct: 300 gaggaatcaaaggctgttacaaaagcttctgctatgaaagcaattaagcagcggatggaa 359 Query: 318 aaagatattgatgaagtggggaaaattgctcg 349 |||||| |||||||||| || ||||| ||||| Sbjct: 360 aaagatgttgatgaagtcggaaaaatagctcg 391
>gb|DQ867120.1| Nicotiana benthamiana syntaxin (SYP132) mRNA, partial cds Length = 861 Score = 87.7 bits (44), Expect = 9e-14 Identities = 80/92 (86%) Strand = Plus / Plus Query: 258 gaggaatcaaaagcagttacaaaagcaagtgccatgaaagcaattaagcagcgaatggag 317 ||||||||||| || ||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 238 gaggaatcaaaggctgttacaaaagctgctgctatgaaagcaattaagcagcgaatggaa 297 Query: 318 aaagatattgatgaagtggggaaaattgctcg 349 |||||| | |||||||| || ||||| ||||| Sbjct: 298 aaagatgtcgatgaagtcggaaaaatagctcg 329 Score = 73.8 bits (37), Expect = 1e-09 Identities = 121/149 (81%) Strand = Plus / Plus Query: 646 ttcagcagcaggggagaggccaggtattggacactgttgctgagatacaggagcggcatg 705 ||||||| || ||| |||| ||| || ||| |||| | ||||| || || ||||| |||| Sbjct: 626 ttcagcaacaagggcgaggacagataatgggcactctagctgaaattcaagagcgccatg 685 Query: 706 atgctgtaagagatctagagaggaagcttctggagttacagcagatattcctggatatgg 765 |||| || ||||| ||||||| |||||||| ||||| || ||||||||| |||| || | Sbjct: 686 atgcagtcagagaattagagagaaagcttctagagttgcaacagatattcttggacatag 745 Query: 766 cagtactggttgaggctcaaggagacatg 794 |||| | ||||| ||||||||||||||| Sbjct: 746 cagtgttagttgatgctcaaggagacatg 774
>ref|NM_001066373.1| Oryza sativa (japonica cultivar-group) Os07g0528900 (Os07g0528900) mRNA, complete cds Length = 5373 Score = 52.0 bits (26), Expect = 0.005 Identities = 47/54 (87%) Strand = Plus / Plus Query: 291 atgaaagcaattaagcagcgaatggagaaagatattgatgaagtggggaaaatt 344 ||||||||||| || |||| |||||||||||||| ||||||| ||||||||| Sbjct: 4576 atgaaagcaatcaacaagcgcatggagaaagatatcaatgaagttgggaaaatt 4629
>ref|NM_120890.1| Arabidopsis thaliana SYP132; t-SNARE (SYP132) mRNA, complete cds Length = 1311 Score = 50.1 bits (25), Expect = 0.020 Identities = 73/89 (82%) Strand = Plus / Plus Query: 702 catgatgctgtaagagatctagagaggaagcttctggagttacagcagatattcctggat 761 ||||||||||| ||||| | || | ||| ||||| || ||||| || |||||| ||||| Sbjct: 817 catgatgctgtcagagacttggaaaagaaacttcttgacttacaacaaatattcttggat 876 Query: 762 atggcagtactggttgaggctcaaggaga 790 |||||||| ||||||| || |||||||| Sbjct: 877 atggcagttttggttgatgcacaaggaga 905
>ref|NM_001036776.1| Arabidopsis thaliana SYP132; t-SNARE (SYP132) mRNA, complete cds Length = 1432 Score = 50.1 bits (25), Expect = 0.020 Identities = 73/89 (82%) Strand = Plus / Plus Query: 702 catgatgctgtaagagatctagagaggaagcttctggagttacagcagatattcctggat 761 ||||||||||| ||||| | || | ||| ||||| || ||||| || |||||| ||||| Sbjct: 938 catgatgctgtcagagacttggaaaagaaacttcttgacttacaacaaatattcttggat 997 Query: 762 atggcagtactggttgaggctcaaggaga 790 |||||||| ||||||| || |||||||| Sbjct: 998 atggcagttttggttgatgcacaaggaga 1026
>gb|AY117244.1| Arabidopsis thaliana putative syntaxin (At5g08080) mRNA, complete cds Length = 946 Score = 50.1 bits (25), Expect = 0.020 Identities = 73/89 (82%) Strand = Plus / Plus Query: 702 catgatgctgtaagagatctagagaggaagcttctggagttacagcagatattcctggat 761 ||||||||||| ||||| | || | ||| ||||| || ||||| || |||||| ||||| Sbjct: 631 catgatgctgtcagagacttggaaaagaaacttcttgacttacaacaaatattcttggat 690 Query: 762 atggcagtactggttgaggctcaaggaga 790 |||||||| ||||||| || |||||||| Sbjct: 691 atggcagttttggttgatgcacaaggaga 719
>gb|AY063836.1| Arabidopsis thaliana putative syntaxin (At5g08080) mRNA, complete cds Length = 1327 Score = 50.1 bits (25), Expect = 0.020 Identities = 73/89 (82%) Strand = Plus / Plus Query: 702 catgatgctgtaagagatctagagaggaagcttctggagttacagcagatattcctggat 761 ||||||||||| ||||| | || | ||| ||||| || ||||| || |||||| ||||| Sbjct: 817 catgatgctgtcagagacttggaaaagaaacttcttgacttacaacaaatattcttggat 876 Query: 762 atggcagtactggttgaggctcaaggaga 790 |||||||| ||||||| || |||||||| Sbjct: 877 atggcagttttggttgatgcacaaggaga 905
>gb|AY085238.1| Arabidopsis thaliana clone 14098 mRNA, complete sequence Length = 1311 Score = 50.1 bits (25), Expect = 0.020 Identities = 73/89 (82%) Strand = Plus / Plus Query: 702 catgatgctgtaagagatctagagaggaagcttctggagttacagcagatattcctggat 761 ||||||||||| ||||| | || | ||| ||||| || ||||| || |||||| ||||| Sbjct: 817 catgatgctgtcagagacttggaaaagaaacttcttgacttacaacaaatattcttggat 876 Query: 762 atggcagtactggttgaggctcaaggaga 790 |||||||| ||||||| || |||||||| Sbjct: 877 atggcagttttggttgatgcacaaggaga 905
>emb|AL357612.1|ATT22D6 Arabidopsis thaliana DNA chromosome 5, BAC clone T22D6 (ESSA project) Length = 89988 Score = 50.1 bits (25), Expect = 0.020 Identities = 40/45 (88%) Strand = Plus / Plus Query: 746 gcagatattcctggatatggcagtactggttgaggctcaaggaga 790 |||||||||| ||||||||||||| ||||||| || |||||||| Sbjct: 17426 gcagatattcttggatatggcagttttggttgatgcacaaggaga 17470
>emb|BX830279.1|CNS09ZYR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB70ZC02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1270 Score = 50.1 bits (25), Expect = 0.020 Identities = 73/89 (82%) Strand = Plus / Plus Query: 702 catgatgctgtaagagatctagagaggaagcttctggagttacagcagatattcctggat 761 ||||||||||| ||||| | || | ||| ||||| || ||||| || |||||| ||||| Sbjct: 808 catgatgctgtcagagacttggaaaagaaacttcttgacttacaacaaatattcttggat 867 Query: 762 atggcagtactggttgaggctcaaggaga 790 |||||||| ||||||| || |||||||| Sbjct: 868 atggcagttttggttgatgcacaaggaga 896
>emb|BX832681.1|CNS0A1XK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH8ZC08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1372 Score = 50.1 bits (25), Expect = 0.020 Identities = 73/89 (82%) Strand = Plus / Plus Query: 702 catgatgctgtaagagatctagagaggaagcttctggagttacagcagatattcctggat 761 ||||||||||| ||||| | || | ||| ||||| || ||||| || |||||| ||||| Sbjct: 896 catgatgctgtcagagacttggaaaagaaacttcttgacttacaacaaatattcttggat 955 Query: 762 atggcagtactggttgaggctcaaggaga 790 |||||||| ||||||| || |||||||| Sbjct: 956 atggcagttttggttgatgcacaaggaga 984
>emb|BX831307.1|CNS09ZHM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS77ZH04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1170 Score = 50.1 bits (25), Expect = 0.020 Identities = 73/89 (82%) Strand = Plus / Plus Query: 702 catgatgctgtaagagatctagagaggaagcttctggagttacagcagatattcctggat 761 ||||||||||| ||||| | || | ||| ||||| || ||||| || |||||| ||||| Sbjct: 809 catgatgctgtcagagacttggaaaagaaacttcttgacttacaacaaatattcttggat 868 Query: 762 atggcagtactggttgaggctcaaggaga 790 |||||||| ||||||| || |||||||| Sbjct: 869 atggcagttttggttgatgcacaaggaga 897
>emb|AL590842.1| Yersinia pestis CO92 complete genome Length = 4653728 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 301 ttaagcagcgaatggagaaaga 322 |||||||||||||||||||||| Sbjct: 2216551 ttaagcagcgaatggagaaaga 2216572
>gb|AE017042.1| Yersinia pestis biovar Microtus str. 91001, complete genome Length = 4595065 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 301 ttaagcagcgaatggagaaaga 322 |||||||||||||||||||||| Sbjct: 1873313 ttaagcagcgaatggagaaaga 1873334
>gb|AC189464.1| Brassica rapa subsp. pekinensis clone KBrB075L03, complete sequence Length = 132081 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 378 gaaaaagataacttatctaaca 399 |||||||||||||||||||||| Sbjct: 78755 gaaaaagataacttatctaaca 78734
>gb|DQ770343.1| Synthetic construct Yersinia pestis clone FLH0140771.01X y2358 gene, complete sequence Length = 2022 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 301 ttaagcagcgaatggagaaaga 322 |||||||||||||||||||||| Sbjct: 665 ttaagcagcgaatggagaaaga 686
>gb|CP000308.1| Yersinia pestis Antiqua, complete genome Length = 4702289 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 301 ttaagcagcgaatggagaaaga 322 |||||||||||||||||||||| Sbjct: 1501586 ttaagcagcgaatggagaaaga 1501607
>gb|AE009952.1| Yersinia pestis KIM, complete genome Length = 4600755 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 301 ttaagcagcgaatggagaaaga 322 |||||||||||||||||||||| Sbjct: 2600247 ttaagcagcgaatggagaaaga 2600226
>gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B06, complete sequence Length = 139139 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1040 tgtgcaatctgtgtagttctgt 1061 |||||||||||||||||||||| Sbjct: 125750 tgtgcaatctgtgtagttctgt 125729
>gb|AY674229.1| Ixodes pacificus clone IP_7_60_92_136_CLU Shwachman-Bodian-Diamond syndrome-like protein mRNA, complete cds Length = 699 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 313 tggagaaagatattgatgaagt 334 |||||||||||||||||||||| Sbjct: 71 tggagaaagatattgatgaagt 92
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1040 tgtgcaatctgtgtagttctgt 1061 |||||||||||||||||||||| Sbjct: 27761192 tgtgcaatctgtgtagttctgt 27761171
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence Length = 4744671 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 301 ttaagcagcgaatggagaaaga 322 |||||||||||||||||||||| Sbjct: 2294950 ttaagcagcgaatggagaaaga 2294971
>emb|AL031866.1|YP102KB Yersinia pestis 102 kbases unstable region: from 1 to 119443 Length = 119443 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 301 ttaagcagcgaatggagaaaga 322 |||||||||||||||||||||| Sbjct: 32936 ttaagcagcgaatggagaaaga 32915
>dbj|AP004990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0007H12 Length = 150881 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 307 agcgaatggagaaagatattgatgaagtggggaaaatt 344 |||| |||||||||||||| ||||||| ||||||||| Sbjct: 126711 agcgcatggagaaagatatcaatgaagttgggaaaatt 126748
>gb|U22837.2|YPU22837 Yersinia pestis HmsH (hmsH), HmsF (hmsF), HmsR (hmsR), and HmsS (hmsS) genes, complete cds Length = 7661 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 301 ttaagcagcgaatggagaaaga 322 |||||||||||||||||||||| Sbjct: 4404 ttaagcagcgaatggagaaaga 4425
>ref|XM_001194544.1| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC575277 (LOC575277), mRNA Length = 7866 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 647 tcagcagcaggggagaggcca 667 ||||||||||||||||||||| Sbjct: 1258 tcagcagcaggggagaggcca 1238
>ref|XM_775690.2| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC575277 (LOC575277), mRNA Length = 7866 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 647 tcagcagcaggggagaggcca 667 ||||||||||||||||||||| Sbjct: 1258 tcagcagcaggggagaggcca 1238
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 tcctcggcgggattcctcaag 121 ||||||||||||||||||||| Sbjct: 26289255 tcctcggcgggattcctcaag 26289235
>emb|AM231778.1| Dolichodasys sp. MAT2006 partial 18S rRNA gene, isolate MAT2006 Length = 1807 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 521 ccggcaggagtaccgggaagttgtt 545 |||||||||||||||| |||||||| Sbjct: 1713 ccggcaggagtaccggaaagttgtt 1737
>gb|AY954560.1| Papilio rutulus cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 1191 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1071 actcttctatcgatgttacct 1091 ||||||||||||||||||||| Sbjct: 1032 actcttctatcgatgttacct 1052
>ref|XM_963511.1| PREDICTED: Tribolium castaneum similar to CG18304-PA (LOC657022), mRNA Length = 5859 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 ccaaagttgatgaactggaaa 381 ||||||||||||||||||||| Sbjct: 3299 ccaaagttgatgaactggaaa 3319
>ref|NM_170491.1| Drosophila melanogaster Ceramidase CG1471-RE, transcript variant E (CDase), mRNA Length = 2910 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 tcctcggcgggattcctcaag 121 ||||||||||||||||||||| Sbjct: 1192 tcctcggcgggattcctcaag 1172
>ref|NM_170490.1| Drosophila melanogaster Ceramidase CG1471-RD, transcript variant D (CDase), mRNA Length = 2753 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 tcctcggcgggattcctcaag 121 ||||||||||||||||||||| Sbjct: 1035 tcctcggcgggattcctcaag 1015
>ref|NM_170489.1| Drosophila melanogaster Ceramidase CG1471-RC, transcript variant C (CDase), mRNA Length = 2773 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 tcctcggcgggattcctcaag 121 ||||||||||||||||||||| Sbjct: 1055 tcctcggcgggattcctcaag 1035
>ref|NM_170488.1| Drosophila melanogaster Ceramidase CG1471-RB, transcript variant B (CDase), mRNA Length = 2370 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 tcctcggcgggattcctcaag 121 ||||||||||||||||||||| Sbjct: 652 tcctcggcgggattcctcaag 632
>ref|NM_143540.1| Drosophila melanogaster Ceramidase CG1471-RA, transcript variant A (CDase), mRNA Length = 2674 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 tcctcggcgggattcctcaag 121 ||||||||||||||||||||| Sbjct: 956 tcctcggcgggattcctcaag 936
>gb|AC007861.5| Homo sapiens chromosome 16 clone RP11-189E14, complete sequence Length = 175861 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 278 aaaagcaagtgccatgaaagcaatt 302 ||||||||||| ||||||||||||| Sbjct: 146895 aaaagcaagtgacatgaaagcaatt 146871
>gb|AC150419.2| Branchiostoma floridae clone CH302-73J11, complete sequence Length = 185777 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 806 agagacacatgtttcaaatgc 826 ||||||||||||||||||||| Sbjct: 68307 agagacacatgtttcaaatgc 68287
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 4.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 38 ctcgccgcgccacgcctgcggctccgccg 66 |||||||||||||||| ||| |||||||| Sbjct: 28797488 ctcgccgcgccacgcccgcgcctccgccg 28797460
>emb|AL603789.3| Human DNA sequence from clone RP11-415G4 on chromosome 13, complete sequence Length = 129361 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 670 tattggacactgttgctgaga 690 ||||||||||||||||||||| Sbjct: 62088 tattggacactgttgctgaga 62068
>gb|AC093206.2| Homo sapiens chromosome 5 clone CTC-448D22, complete sequence Length = 161754 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 gaatcaaaagcagttacaaaa 281 ||||||||||||||||||||| Sbjct: 87131 gaatcaaaagcagttacaaaa 87111
>emb|CR380948.1| Candida glabrata strain CBS138 chromosome B complete sequence Length = 502101 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 463 cagtcaaaaagaaattgaagg 483 ||||||||||||||||||||| Sbjct: 325539 cagtcaaaaagaaattgaagg 325519
>emb|BX784041.24| Zebrafish DNA sequence from clone DKEYP-95D10 in linkage group 20, complete sequence Length = 34260 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1042 tgcaatctgtgtagttctgtg 1062 ||||||||||||||||||||| Sbjct: 14880 tgcaatctgtgtagttctgtg 14860
>gb|AC008299.5|AC008299 Drosophila melanogaster, chromosome 3R, region 99F4-99F11, BAC clone BACR48G16, complete sequence Length = 173844 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 tcctcggcgggattcctcaag 121 ||||||||||||||||||||| Sbjct: 34302 tcctcggcgggattcctcaag 34282
>gb|AC007614.7| Homo sapiens chromosome 16 clone RP11-491F9, complete sequence Length = 192347 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 278 aaaagcaagtgccatgaaagcaatt 302 ||||||||||| ||||||||||||| Sbjct: 37967 aaaagcaagtgacatgaaagcaatt 37943
>gb|BT004471.1| Drosophila melanogaster SD07768 full insert cDNA Length = 2726 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 tcctcggcgggattcctcaag 121 ||||||||||||||||||||| Sbjct: 956 tcctcggcgggattcctcaag 936
>gb|AC091532.13| Oryza sativa chromosome 3 BAC OSJNBa0078A17 genomic sequence, complete sequence Length = 147344 Score = 42.1 bits (21), Expect = 4.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 38 ctcgccgcgccacgcctgcggctccgccg 66 |||||||||||||||| ||| |||||||| Sbjct: 13145 ctcgccgcgccacgcccgcgcctccgccg 13117
>ref|XM_445116.1| Candida glabrata CBS138, CAGL0B03333g partial mRNA Length = 1317 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 463 cagtcaaaaagaaattgaagg 483 ||||||||||||||||||||| Sbjct: 545 cagtcaaaaagaaattgaagg 565
>gb|AC008444.4|AC008444 Homo sapiens chromosome 5 clone CTC-338N15, complete sequence Length = 107553 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 gaatcaaaagcagttacaaaa 281 ||||||||||||||||||||| Sbjct: 91006 gaatcaaaagcagttacaaaa 91026
>dbj|AB112076.1| Drosophila melanogaster fcd mRNA for neutral ceramidase, complete cds Length = 2649 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 tcctcggcgggattcctcaag 121 ||||||||||||||||||||| Sbjct: 919 tcctcggcgggattcctcaag 899
>gb|AF044015.1|AF044015 Papilio rutulus cytochrome oxidase subunit I (COI) gene, complete cds; tRNA-Leu gene, complete sequence; and cytochrome oxidase subunit II (COII) gene, complete cds, mitochondrial genes for mitochondrial products Length = 2291 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1071 actcttctatcgatgttacct 1091 ||||||||||||||||||||| Sbjct: 1080 actcttctatcgatgttacct 1100
>emb|AL627405.17| Mouse DNA sequence from clone RP23-183D11 on chromosome 4, complete sequence Length = 193847 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 674 ggacactgttgctgagataca 694 ||||||||||||||||||||| Sbjct: 11594 ggacactgttgctgagataca 11574 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 242,237,445 Number of extensions: 12980677 Number of successful extensions: 278187 Number of sequences better than 10.0: 61 Number of HSP's gapped: 278183 Number of HSP's successfully gapped: 97 Length of query: 1261 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1238 Effective length of database: 18,503,978,556 Effective search space: 22907925452328 Effective search space used: 22907925452328 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)