ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf150e10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P24152:EXTN_SORBI Extensin precursor - Sorghum bicolor (Sorghum)... 32 1.6
2Q924S7:SPRE2_MOUSE Sprouty-related, EVH1 domain-containing prote... 31 2.6
3Q7Z698:SPRE2_HUMAN Sprouty-related, EVH1 domain-containing prote... 31 2.6
4Q6NYK3:SPRE2_DANRE Sprouty-related, EVH1 domain-containing prote... 31 3.4
5Q92J81:Y188_RICCN Uncharacterized protein RC0188 - Rickettsia co... 30 5.9
6Q9NYV4:CD2L7_HUMAN Cell division cycle 2-related protein kinase ... 30 5.9
7Q9Y493:ZAN_HUMAN Zonadhesin precursor - Homo sapiens (Human) 30 7.7

>P24152:EXTN_SORBI Extensin precursor - Sorghum bicolor (Sorghum) (Sorghum vulgare)|
          Length = 283
 Score = 32.0 bits (71), Expect = 1.6
 Identities = 18/42 (42%), Positives = 21/42 (50%)
 Frame = +2

Query: 5   PVPTLPAFPRTPKQGATEPCRTLVCSTSKPTIPMPTFRTTMP 130
           P P+ P +  TPK  AT+P       TS PT P PT  T  P
Sbjct: 205 PKPSPPTYTPTPKPPATKP------PTSTPTHPKPTPHTPYP 240



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>Q924S7:SPRE2_MOUSE Sprouty-related, EVH1 domain-containing protein 2 - Mus musculus|
           (Mouse)
          Length = 410

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 17/61 (27%), Positives = 26/61 (42%)
 Frame = +3

Query: 333 REPGFLSRGIICLCSVQHESSNKRCCLEVP*ISRGCVIMVFLFVT*IRLMWIGCTAIHHC 512
           +E G  SR + C     HE + +  C + P   R C+  V         MW   + ++HC
Sbjct: 293 KENGERSRCVYCRDMFNHEENRRGHCQDAPDAVRTCIRRV-------SCMWCADSMLYHC 345

Query: 513 M 515
           M
Sbjct: 346 M 346



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>Q7Z698:SPRE2_HUMAN Sprouty-related, EVH1 domain-containing protein 2 - Homo sapiens|
           (Human)
          Length = 418

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 17/61 (27%), Positives = 26/61 (42%)
 Frame = +3

Query: 333 REPGFLSRGIICLCSVQHESSNKRCCLEVP*ISRGCVIMVFLFVT*IRLMWIGCTAIHHC 512
           +E G  SR + C     HE + +  C + P   R C+  V         MW   + ++HC
Sbjct: 301 KEDGERSRCVYCRDMFNHEENRRGHCQDAPDSVRTCIRRV-------SCMWCADSMLYHC 353

Query: 513 M 515
           M
Sbjct: 354 M 354



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>Q6NYK3:SPRE2_DANRE Sprouty-related, EVH1 domain-containing protein 2 - Danio rerio|
           (Zebrafish) (Brachydanio rerio)
          Length = 413

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 17/61 (27%), Positives = 26/61 (42%)
 Frame = +3

Query: 333 REPGFLSRGIICLCSVQHESSNKRCCLEVP*ISRGCVIMVFLFVT*IRLMWIGCTAIHHC 512
           +E G  SR + C     HE + +  C + P   R C+  V         MW   + ++HC
Sbjct: 296 KEDGERSRCVYCRDMFNHEENRRGQCHDAPDPIRTCIHRV-------SFMWCADSMLYHC 348

Query: 513 M 515
           M
Sbjct: 349 M 349



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>Q92J81:Y188_RICCN Uncharacterized protein RC0188 - Rickettsia conorii|
          Length = 704

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 106 ANFQDNHASVMKKEVAVGANHVQAPKKQVRFQDNHAN 216
           A F DN   V+KKE  +    ++  KK +++QDN  N
Sbjct: 567 AKFYDNIMKVLKKENYLTEQDIKGIKKNLKYQDNIEN 603



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>Q9NYV4:CD2L7_HUMAN Cell division cycle 2-related protein kinase 7 - Homo sapiens|
           (Human)
          Length = 1490

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +2

Query: 5   PVPTLPAFPRTPKQGATEPCRTLVCSTSKPTIPMPTFRTTMPV 133
           P+P +PA P+ P    ++P  + V ++S  T+P  T   T  V
Sbjct: 553 PLPPIPALPQQPPLPPSQPAFSQVPASSTSTLPPSTHSKTSAV 595



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>Q9Y493:ZAN_HUMAN Zonadhesin precursor - Homo sapiens (Human)|
          Length = 2812

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 5/39 (12%)
 Frame = +2

Query: 29  PRTPKQGATEPCRTLVCSTSKPTIP-----MPTFRTTMP 130
           P  PK+  T P      ST KPTIP     MP+ + T+P
Sbjct: 584 PTVPKEKPTIPTEKPTISTEKPTIPSEKPNMPSEKPTIP 622


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 105,919,747
Number of extensions: 2413299
Number of successful extensions: 6159
Number of sequences better than 10.0: 7
Number of HSP's gapped: 6151
Number of HSP's successfully gapped: 7
Length of query: 189
Length of database: 100,686,439
Length adjustment: 107
Effective length of query: 82
Effective length of database: 71,336,874
Effective search space: 5849623668
Effective search space used: 5849623668
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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