ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf150c10 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT832939.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI025P22, full insert sequence Length = 506 Score = 202 bits (102), Expect = 9e-49 Identities = 189/218 (86%) Strand = Plus / Plus Query: 75 ctcgcccccgccgggcccgtccgccatgtcgaagcaaggagggaaggccaagccgctcaa 134 ||||||| ||||| || ||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 77 ctcgccctcgccgatccggtcagccatgtcgaagcaaggagggaaggccaagcccctcaa 136 Query: 135 gcaggccaaggtcgccgagaaggactacgacgagaatgacctggcatacctccagaagaa 194 | | |||||| || ||||||| |||||||||| ||| || || || || |||||||| Sbjct: 137 ggcgcccaaggccgagaagaaggagtacgacgagagtgatctcgcgtatctgcagaagaa 196 Query: 195 gaaggatgagcaaaaggccctgaaggagctgaaggccaaggctggccagaagggtgcgct 254 ||| |||||| ||||||| ||||||||||| ||||||||||| || ||||||||||| || Sbjct: 197 gaaagatgaggaaaaggcactgaaggagcttaaggccaaggcaggacagaagggtgcact 256 Query: 255 gggaggatctggtctgaagaagagtgggaagaaatgag 292 |||||| ||||||||||||||||| ||||||||||||| Sbjct: 257 gggaggctctggtctgaagaagagcgggaagaaatgag 294
>emb|CT832938.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI021H13, full insert sequence Length = 424 Score = 202 bits (102), Expect = 9e-49 Identities = 189/218 (86%) Strand = Plus / Plus Query: 75 ctcgcccccgccgggcccgtccgccatgtcgaagcaaggagggaaggccaagccgctcaa 134 ||||||| ||||| || ||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 72 ctcgccctcgccgatccggtcagccatgtcgaagcaaggagggaaggccaagcccctcaa 131 Query: 135 gcaggccaaggtcgccgagaaggactacgacgagaatgacctggcatacctccagaagaa 194 | | |||||| || ||||||| |||||||||| ||| || || || || |||||||| Sbjct: 132 ggcgcccaaggccgagaagaaggagtacgacgagagtgatctcgcgtatctgcagaagaa 191 Query: 195 gaaggatgagcaaaaggccctgaaggagctgaaggccaaggctggccagaagggtgcgct 254 ||| |||||| ||||||| ||||||||||| ||||||||||| || ||||||||||| || Sbjct: 192 gaaagatgaggaaaaggcactgaaggagcttaaggccaaggcaggacagaagggtgcact 251 Query: 255 gggaggatctggtctgaagaagagtgggaagaaatgag 292 |||||| ||||||||||||||||| ||||||||||||| Sbjct: 252 gggaggctctggtctgaagaagagcgggaagaaatgag 289
>emb|CT832937.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA005I14, full insert sequence Length = 538 Score = 202 bits (102), Expect = 9e-49 Identities = 189/218 (86%) Strand = Plus / Plus Query: 75 ctcgcccccgccgggcccgtccgccatgtcgaagcaaggagggaaggccaagccgctcaa 134 ||||||| ||||| || ||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 101 ctcgccctcgccgatccggtcagccatgtcgaagcaaggagggaaggccaagcccctcaa 160 Query: 135 gcaggccaaggtcgccgagaaggactacgacgagaatgacctggcatacctccagaagaa 194 | | |||||| || ||||||| |||||||||| ||| || || || || |||||||| Sbjct: 161 ggcgcccaaggccgagaagaaggagtacgacgagagtgatctcgcgtatctgcagaagaa 220 Query: 195 gaaggatgagcaaaaggccctgaaggagctgaaggccaaggctggccagaagggtgcgct 254 ||| |||||| ||||||| ||||||||||| ||||||||||| || ||||||||||| || Sbjct: 221 gaaagatgaggaaaaggcactgaaggagcttaaggccaaggcaggacagaagggtgcact 280 Query: 255 gggaggatctggtctgaagaagagtgggaagaaatgag 292 |||||| ||||||||||||||||| ||||||||||||| Sbjct: 281 gggaggctctggtctgaagaagagcgggaagaaatgag 318
>gb|BT017039.1| Zea mays clone EL01N0202F08.c mRNA sequence Length = 486 Score = 147 bits (74), Expect = 5e-32 Identities = 166/196 (84%), Gaps = 3/196 (1%) Strand = Plus / Plus Query: 97 gccatgtcgaagcaaggagggaaggccaagccgctcaagcaggccaaggtcgccgagaag 156 ||||||||||||||||||||||||||||||||||| ||| | ||||||||| | ||||| Sbjct: 62 gccatgtcgaagcaaggagggaaggccaagccgctgaaggcgcccaaggtcgacaagaag 121 Query: 157 gactacgacgagaatgacctggcatacctccagaagaagaaggatgagcaaaaggccctg 216 || |||||||||| ||| || || || | ||||||||||| |||||| ||||||| ||| Sbjct: 122 gagtacgacgagagtgatcttgcttatttgcagaagaagaaagatgaggaaaaggcgctg 181 Query: 217 aaggagctgaaggccaaggctggccagaagggtgcgctgggaggatctggtctgaagaag 276 |||||||||||||||||||| |||||||| || | ||||| || ||||| ||||| Sbjct: 182 aaggagctgaaggccaaggc---acagaagggcgcaattggaggctcgggtctcaagaaa 238 Query: 277 agtgggaagaaatgag 292 ||||| |||||||||| Sbjct: 239 agtggaaagaaatgag 254
>gb|BT016830.1| Zea mays clone Contig663 mRNA sequence Length = 531 Score = 139 bits (70), Expect = 1e-29 Identities = 165/196 (84%), Gaps = 3/196 (1%) Strand = Plus / Plus Query: 97 gccatgtcgaagcaaggagggaaggccaagccgctcaagcaggccaaggtcgccgagaag 156 ||||||||||||||||||||||||||||||||||| ||| | |||||| || | ||||| Sbjct: 87 gccatgtcgaagcaaggagggaaggccaagccgctgaaggcgcccaaggccgacaagaag 146 Query: 157 gactacgacgagaatgacctggcatacctccagaagaagaaggatgagcaaaaggccctg 216 || |||||||||| || || ||||| || ||||||||||| |||||| |||| || ||| Sbjct: 147 gagtacgacgagacggatcttgcatatctgcagaagaagaaagatgaggaaaaagcactg 206 Query: 217 aaggagctgaaggccaaggctggccagaagggtgcgctgggaggatctggtctgaagaag 276 |||||||| ||||||||||| |||||||| ||| | || || || ||||||||||| Sbjct: 207 aaggagcttaaggccaaggc---acagaagggcgcgattgggggctcgggtctgaagaaa 263 Query: 277 agtgggaagaaatgag 292 ||||| |||||||||| Sbjct: 264 agtggaaagaaatgag 279 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Plus Query: 342 ctatctgtgtcgcgcttcactatctgtggttgtaacag 379 |||||||||| ||||||||||| |||| ||||||||| Sbjct: 326 ctatctgtgttgcgcttcactaagtgtgattgtaacag 363
>dbj|AK065448.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013020E03, full insert sequence Length = 1940 Score = 139 bits (70), Expect = 1e-29 Identities = 97/106 (91%) Strand = Plus / Plus Query: 187 cagaagaagaaggatgagcaaaaggccctgaaggagctgaaggccaaggctggccagaag 246 ||||||||||| |||||| ||||||| ||||||||||| ||||||||||| || |||||| Sbjct: 1622 cagaagaagaaagatgaggaaaaggcactgaaggagcttaaggccaaggcaggacagaag 1681 Query: 247 ggtgcgctgggaggatctggtctgaagaagagtgggaagaaatgag 292 ||||| |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 1682 ggtgcactgggaggctctggtctgaagaagagcgggaagaaatgag 1727 Score = 75.8 bits (38), Expect = 1e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 75 ctcgcccccgccgggcccgtccgccatgtcgaagcaaggagggaaggccaagccgctcaa 134 ||||||| ||||| || ||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 71 ctcgccctcgccgatccggtcagccatgtcgaagcaaggagggaaggccaagcccctcaa 130 Query: 135 gcaggccaaggtcgccgagaaggactacgacgag 168 | | |||||| || ||||||| ||||||||| Sbjct: 131 ggcgcccaaggccgagaagaaggagtacgacgag 164
>gb|AY108524.1| Zea mays PCO149369 mRNA sequence Length = 627 Score = 139 bits (70), Expect = 1e-29 Identities = 165/196 (84%), Gaps = 3/196 (1%) Strand = Plus / Plus Query: 97 gccatgtcgaagcaaggagggaaggccaagccgctcaagcaggccaaggtcgccgagaag 156 ||||||||||||||||||||||||||||||||||| ||| | ||||||||| | ||||| Sbjct: 180 gccatgtcgaagcaaggagggaaggccaagccgctgaaggcgcccaaggtcgacaagaag 239 Query: 157 gactacgacgagaatgacctggcatacctccagaagaagaaggatgagcaaaaggccctg 216 || |||||||||| ||| || || || | |||||||| || |||||| ||||||| ||| Sbjct: 240 gagtacgacgagagtgatcttgcttatttgcagaagaaaaaagatgaggaaaaggcgctg 299 Query: 217 aaggagctgaaggccaaggctggccagaagggtgcgctgggaggatctggtctgaagaag 276 |||||||||||||||||||| |||||||| || | ||||| || ||||| ||||| Sbjct: 300 aaggagctgaaggccaaggc---acagaagggcgcaattggaggctcgggtctcaagaaa 356 Query: 277 agtgggaagaaatgag 292 ||||| |||||||||| Sbjct: 357 agtggaaagaaatgag 372
>gb|DQ245634.1| Zea mays clone 18562 mRNA sequence Length = 621 Score = 131 bits (66), Expect = 3e-27 Identities = 164/196 (83%), Gaps = 3/196 (1%) Strand = Plus / Plus Query: 97 gccatgtcgaagcaaggagggaaggccaagccgctcaagcaggccaaggtcgccgagaag 156 ||||||||||||||||||||||||||||||||||| ||| | |||||| || | ||||| Sbjct: 202 gccatgtcgaagcaaggagggaaggccaagccgctgaaggcgcccaaggccgacaagaag 261 Query: 157 gactacgacgagaatgacctggcatacctccagaagaagaaggatgagcaaaaggccctg 216 || |||||||||| || || ||||| || ||||||||||| || ||| |||| || ||| Sbjct: 262 gagtacgacgagacggatcttgcatatctgcagaagaagaaagacgaggaaaaagcactg 321 Query: 217 aaggagctgaaggccaaggctggccagaagggtgcgctgggaggatctggtctgaagaag 276 |||||||| ||||||||||| || ||||| ||| | ||||| || ||||||||||| Sbjct: 322 aaggagctcaaggccaaggc---acaaaagggcgcgattggaggctcgggtctgaagaaa 378 Query: 277 agtgggaagaaatgag 292 ||||| |||||||||| Sbjct: 379 agtggaaagaaatgag 394 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Plus Query: 342 ctatctgtgtcgcgcttcactatctgtggttgtaacag 379 |||||||||| ||||||||||| |||| ||||||||| Sbjct: 440 ctatctgtgttgcgcttcactacgtgtgattgtaacag 477
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Minus Query: 209 aggccctgaaggagctgaaggccaaggctggccagaagggtgcgctgggaggatctggtc 268 |||| ||||||||||| ||||||||||| || ||||||||||| |||||||| ||||||| Sbjct: 28256081 aggcactgaaggagcttaaggccaaggcaggacagaagggtgcactgggaggctctggtc 28256022 Query: 269 tgaagaagagtgggaagaaatgag 292 |||||||||| ||||||||||||| Sbjct: 28256021 tgaagaagagcgggaagaaatgag 28255998 Score = 44.1 bits (22), Expect = 0.50 Identities = 49/58 (84%) Strand = Plus / Minus Query: 111 aggagggaaggccaagccgctcaagcaggccaaggtcgccgagaaggactacgacgag 168 |||||||||||||||||| |||||| | |||||| || ||||||| ||||||||| Sbjct: 28257719 aggagggaaggccaagcccctcaaggcgcccaaggccgagaagaaggagtacgacgag 28257662 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgtgtc 352 |||||||||||||||||||| |||| Sbjct: 12578119 atctatctatctacctatctatgtc 12578143 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatct 347 |||||||||||||||||||| Sbjct: 7364470 atctatctatctacctatct 7364451 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 320 aaatgataatctatctatctacctatct 347 |||| |||||||||||||||| |||||| Sbjct: 23386674 aaataataatctatctatctatctatct 23386701
>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0623A10 Length = 156517 Score = 111 bits (56), Expect = 3e-21 Identities = 77/84 (91%) Strand = Plus / Minus Query: 209 aggccctgaaggagctgaaggccaaggctggccagaagggtgcgctgggaggatctggtc 268 |||| ||||||||||| ||||||||||| || ||||||||||| |||||||| ||||||| Sbjct: 54110 aggcactgaaggagcttaaggccaaggcaggacagaagggtgcactgggaggctctggtc 54051 Query: 269 tgaagaagagtgggaagaaatgag 292 |||||||||| ||||||||||||| Sbjct: 54050 tgaagaagagcgggaagaaatgag 54027 Score = 44.1 bits (22), Expect = 0.50 Identities = 49/58 (84%) Strand = Plus / Minus Query: 111 aggagggaaggccaagccgctcaagcaggccaaggtcgccgagaaggactacgacgag 168 |||||||||||||||||| |||||| | |||||| || ||||||| ||||||||| Sbjct: 55748 aggagggaaggccaagcccctcaaggcgcccaaggccgagaagaaggagtacgacgag 55691
>gb|AY109688.1| Zea mays CL339_1 mRNA sequence Length = 1928 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 97 gccatgtcgaagcaaggagggaaggccaagccgctcaagcaggccaaggtcgccgagaag 156 ||||||||||||||||||||||||||||||||||| ||| | |||||| || | ||||| Sbjct: 1355 gccatgtcgaagcaaggagggaaggccaagccgctgaaggcgcccaaggccgacaagaag 1414 Query: 157 gactacgacgaga 169 || |||||||||| Sbjct: 1415 gagtacgacgaga 1427 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Plus Query: 342 ctatctgtgtcgcgcttcactatctgtggttgtaacag 379 |||||||||| ||||||||||| |||| ||||||||| Sbjct: 1593 ctatctgtgttgcgcttcactaagtgtgattgtaacag 1630
>emb|CT986403.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 584 Score = 73.8 bits (37), Expect = 6e-10 Identities = 115/141 (81%) Strand = Plus / Plus Query: 152 agaaggactacgacgagaatgacctggcatacctccagaagaagaaggatgagcaaaagg 211 ||||||| |||||||||||||| |||| ||||| || ||||||||||| || | |||| Sbjct: 146 agaaggagtacgacgagaatgatttggcctaccttcaaaagaagaaggaagaagagaagg 205 Query: 212 ccctgaaggagctgaaggccaaggctggccagaagggtgcgctgggaggatctggtctga 271 | |||||||||| || | ||||||| |||||||| | || ||||||||||| || | Sbjct: 206 cattgaaggagcttaaagtcaaggctacgcagaagggatcccttggaggatctggactca 265 Query: 272 agaagagtgggaagaaatgag 292 |||||||||| ||||| |||| Sbjct: 266 agaagagtggcaagaagtgag 286
>emb|CT984413.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 539 Score = 73.8 bits (37), Expect = 6e-10 Identities = 115/141 (81%) Strand = Plus / Plus Query: 152 agaaggactacgacgagaatgacctggcatacctccagaagaagaaggatgagcaaaagg 211 ||||||| |||||||||||||| |||| ||||| || ||||||||||| || | |||| Sbjct: 87 agaaggagtacgacgagaatgatttggcctaccttcaaaagaagaaggaagaagagaagg 146 Query: 212 ccctgaaggagctgaaggccaaggctggccagaagggtgcgctgggaggatctggtctga 271 | |||||||||| || | ||||||| |||||||| | || ||||||||||| || | Sbjct: 147 cattgaaggagcttaaagtcaaggctacgcagaagggatcccttggaggatctggactca 206 Query: 272 agaagagtgggaagaaatgag 292 |||||||||| ||||| |||| Sbjct: 207 agaagagtggcaagaagtgag 227
>emb|CT984326.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 488 Score = 73.8 bits (37), Expect = 6e-10 Identities = 115/141 (81%) Strand = Plus / Plus Query: 152 agaaggactacgacgagaatgacctggcatacctccagaagaagaaggatgagcaaaagg 211 ||||||| |||||||||||||| |||| ||||| || ||||||||||| || | |||| Sbjct: 148 agaaggattacgacgagaatgatttggcctaccttcaaaagaagaaggaagaagagaagg 207 Query: 212 ccctgaaggagctgaaggccaaggctggccagaagggtgcgctgggaggatctggtctga 271 | |||||||||| || | ||||||| |||||||| | || ||||||||||| || | Sbjct: 208 cattgaaggagcttaaagtcaaggctacgcagaagggatcccttggaggatctggactca 267 Query: 272 agaagagtgggaagaaatgag 292 |||||||||| ||||| |||| Sbjct: 268 agaagagtggcaagaagtgag 288
>emb|CT983573.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 584 Score = 73.8 bits (37), Expect = 6e-10 Identities = 115/141 (81%) Strand = Plus / Plus Query: 152 agaaggactacgacgagaatgacctggcatacctccagaagaagaaggatgagcaaaagg 211 ||||||| |||||||||||||| |||| ||||| || ||||||||||| || | |||| Sbjct: 146 agaaggagtacgacgagaatgatttggcctaccttcaaaagaagaaggaagaagagaagg 205 Query: 212 ccctgaaggagctgaaggccaaggctggccagaagggtgcgctgggaggatctggtctga 271 | |||||||||| || | ||||||| |||||||| | || ||||||||||| || | Sbjct: 206 cattgaaggagcttaaagtcaaggctacgcagaagggatcccttggaggatctggactca 265 Query: 272 agaagagtgggaagaaatgag 292 |||||||||| ||||| |||| Sbjct: 266 agaagagtggcaagaagtgag 286
>emb|CT982908.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 518 Score = 73.8 bits (37), Expect = 6e-10 Identities = 115/141 (81%) Strand = Plus / Plus Query: 152 agaaggactacgacgagaatgacctggcatacctccagaagaagaaggatgagcaaaagg 211 ||||||| |||||||||||||| |||| ||||| || ||||||||||| || | |||| Sbjct: 147 agaaggagtacgacgagaatgatttggcctaccttcaaaagaagaaggaagaagagaagg 206 Query: 212 ccctgaaggagctgaaggccaaggctggccagaagggtgcgctgggaggatctggtctga 271 | |||||||||| || | ||||||| |||||||| | || ||||||||||| || | Sbjct: 207 cattgaaggagcttaaagtcaaggctacgcagaagggatcccttggaggatctggactca 266 Query: 272 agaagagtgggaagaaatgag 292 |||||||||| ||||| |||| Sbjct: 267 agaagagtggcaagaagtgag 287
>emb|CT981600.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 586 Score = 73.8 bits (37), Expect = 6e-10 Identities = 115/141 (81%) Strand = Plus / Plus Query: 152 agaaggactacgacgagaatgacctggcatacctccagaagaagaaggatgagcaaaagg 211 ||||||| |||||||||||||| |||| ||||| || ||||||||||| || | |||| Sbjct: 155 agaaggattacgacgagaatgatttggcctaccttcaaaagaagaaggaagaagagaagg 214 Query: 212 ccctgaaggagctgaaggccaaggctggccagaagggtgcgctgggaggatctggtctga 271 | |||||||||| || | ||||||| |||||||| | || ||||||||||| || | Sbjct: 215 cattgaaggagcttaaagtcaaggctacgcagaagggatcccttggaggatctggactca 274 Query: 272 agaagagtgggaagaaatgag 292 |||||||||| ||||| |||| Sbjct: 275 agaagagtggcaagaagtgag 295
>emb|CT980920.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 539 Score = 73.8 bits (37), Expect = 6e-10 Identities = 115/141 (81%) Strand = Plus / Plus Query: 152 agaaggactacgacgagaatgacctggcatacctccagaagaagaaggatgagcaaaagg 211 ||||||| |||||||||||||| |||| ||||| || ||||||||||| || | |||| Sbjct: 87 agaaggagtacgacgagaatgatttggcctaccttcaaaagaagaaggaagaagagaagg 146 Query: 212 ccctgaaggagctgaaggccaaggctggccagaagggtgcgctgggaggatctggtctga 271 | |||||||||| || | ||||||| |||||||| | || ||||||||||| || | Sbjct: 147 cattgaaggagcttaaagtcaaggctacgcagaagggatcccttggaggatctggactca 206 Query: 272 agaagagtgggaagaaatgag 292 |||||||||| ||||| |||| Sbjct: 207 agaagagtggcaagaagtgag 227
>emb|CT980761.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 483 Score = 73.8 bits (37), Expect = 6e-10 Identities = 115/141 (81%) Strand = Plus / Plus Query: 152 agaaggactacgacgagaatgacctggcatacctccagaagaagaaggatgagcaaaagg 211 ||||||| |||||||||||||| |||| ||||| || ||||||||||| || | |||| Sbjct: 147 agaaggagtacgacgagaatgatttggcctaccttcaaaagaagaaggaagaagagaagg 206 Query: 212 ccctgaaggagctgaaggccaaggctggccagaagggtgcgctgggaggatctggtctga 271 | |||||||||| || | ||||||| |||||||| | || ||||||||||| || | Sbjct: 207 cattgaaggagcttaaagtcaaggctacgcagaagggatcccttggaggatctggactca 266 Query: 272 agaagagtgggaagaaatgag 292 |||||||||| ||||| |||| Sbjct: 267 agaagagtggcaagaagtgag 287
>emb|CT988532.1| Eucalyptus globulus EST from juvenile versus mature wood and mature versus juvenile wood SSH libraries Length = 477 Score = 65.9 bits (33), Expect = 1e-07 Identities = 108/133 (81%) Strand = Plus / Plus Query: 160 tacgacgagaatgacctggcatacctccagaagaagaaggatgagcaaaaggccctgaag 219 |||||||||||||| |||| ||||| || ||||||||||| || | ||||| ||||| Sbjct: 23 tacgacgagaatgatttggcctaccttcaaaagaagaaggaagaagagaaggcattgaag 82 Query: 220 gagctgaaggccaaggctggccagaagggtgcgctgggaggatctggtctgaagaagagt 279 ||||| || | ||||||| |||||||| | || ||||||||||| || ||||||||| Sbjct: 83 gagcttaaagtcaaggctacgcagaagggatcccttggaggatctggactcaagaagagt 142 Query: 280 gggaagaaatgag 292 || ||||| |||| Sbjct: 143 ggcaagaagtgag 155
>emb|CT988158.1| Eucalyptus globulus EST from juvenile versus mature wood and mature versus juvenile wood SSH libraries Length = 477 Score = 65.9 bits (33), Expect = 1e-07 Identities = 108/133 (81%) Strand = Plus / Minus Query: 160 tacgacgagaatgacctggcatacctccagaagaagaaggatgagcaaaaggccctgaag 219 |||||||||||||| |||| ||||| || ||||||||||| || | ||||| ||||| Sbjct: 455 tacgacgagaatgatttggcctaccttcaaaagaagaaggaagaagagaaggcattgaag 396 Query: 220 gagctgaaggccaaggctggccagaagggtgcgctgggaggatctggtctgaagaagagt 279 ||||| || | ||||||| |||||||| | || ||||||||||| || ||||||||| Sbjct: 395 gagcttaaagtcaaggctacgcagaagggatcccttggaggatctggactcaagaagagt 336 Query: 280 gggaagaaatgag 292 || ||||| |||| Sbjct: 335 ggcaagaagtgag 323
>emb|CT988222.1| Eucalyptus globulus EST from juvenile versus mature wood and mature versus juvenile wood SSH libraries Length = 477 Score = 65.9 bits (33), Expect = 1e-07 Identities = 108/133 (81%) Strand = Plus / Plus Query: 160 tacgacgagaatgacctggcatacctccagaagaagaaggatgagcaaaaggccctgaag 219 |||||||||||||| |||| ||||| || ||||||||||| || | ||||| ||||| Sbjct: 23 tacgacgagaatgatttggcctaccttcaaaagaagaaggaagaagagaaggcattgaag 82 Query: 220 gagctgaaggccaaggctggccagaagggtgcgctgggaggatctggtctgaagaagagt 279 ||||| || | ||||||| |||||||| | || ||||||||||| || ||||||||| Sbjct: 83 gagcttaaagtcaaggctacgcagaagggatcccttggaggatctggactcaagaagagt 142 Query: 280 gggaagaaatgag 292 || ||||| |||| Sbjct: 143 ggcaagaagtgag 155
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 65.9 bits (33), Expect = 1e-07 Identities = 87/105 (82%) Strand = Plus / Plus Query: 188 agaagaagaaggatgagcaaaaggccctgaaggagctgaaggccaaggctggccagaagg 247 |||||||||| || ||| | ||||||||||||||||||| ||||||||| | ||||||| Sbjct: 3219413 agaagaagaaagaggaggagaaggccctgaaggagctgagggccaaggcggcgcagaagg 3219472 Query: 248 gtgcgctgggaggatctggtctgaagaagagtgggaagaaatgag 292 | || || ||||| | ||||| ||||| ||||| || ||||||| Sbjct: 3219473 gcgcacttggaggcgccggtctcaagaaaagtggcaaaaaatgag 3219517 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 324 gataatctatctatctacctatct 347 ||||||||||||||||| |||||| Sbjct: 26626835 gataatctatctatctatctatct 26626812
>dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1103G11 Length = 182931 Score = 65.9 bits (33), Expect = 1e-07 Identities = 87/105 (82%) Strand = Plus / Plus Query: 188 agaagaagaaggatgagcaaaaggccctgaaggagctgaaggccaaggctggccagaagg 247 |||||||||| || ||| | ||||||||||||||||||| ||||||||| | ||||||| Sbjct: 91600 agaagaagaaagaggaggagaaggccctgaaggagctgagggccaaggcggcgcagaagg 91659 Query: 248 gtgcgctgggaggatctggtctgaagaagagtgggaagaaatgag 292 | || || ||||| | ||||| ||||| ||||| || ||||||| Sbjct: 91660 gcgcacttggaggcgccggtctcaagaaaagtggcaaaaaatgag 91704
>dbj|AK224884.1| Solanum lycopersicum cDNA, clone: FC24BB05, HTC in fruit Length = 480 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 190 aagaagaaggatgagcaaaaggccctgaaggagctgaaggccaaggct 237 ||||||||||| || ||||||||||||||||||| ||||| |||||| Sbjct: 155 aagaagaaggaagaagaaaaggccctgaaggagctcaaggcaaaggct 202
>ref|NM_101396.2| Arabidopsis thaliana unknown protein (AT1G15270) mRNA, complete cds Length = 452 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 152 agaaggactacgacgagaatgacctggcatacctccagaagaagaaggatgagcaaaagg 211 ||||||| |||||||||| |||| | || || | ||||||||||| |||||| |||||| Sbjct: 138 agaaggaatacgacgagactgacttagctaacattcagaagaagaaagatgaggaaaagg 197 Query: 212 ccctgaaggagctgaaggccaaggctggccagaagggtgcgctgggaggatctggtctga 271 |||| || ||||| | |||||||| |||||||| | | ||||| ||||| || | Sbjct: 198 cccttaaagagcttagagccaaggcatcgcagaagggatcctttggaggttctggactta 257 Query: 272 agaagagtgggaagaaatga 291 |||||||||| ||||||||| Sbjct: 258 agaagagtggcaagaaatga 277
>gb|AY046003.1| Arabidopsis thaliana unknown protein (At1g15270) mRNA, complete cds Length = 444 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 152 agaaggactacgacgagaatgacctggcatacctccagaagaagaaggatgagcaaaagg 211 ||||||| |||||||||| |||| | || || | ||||||||||| |||||| |||||| Sbjct: 129 agaaggaatacgacgagactgacttagctaacattcagaagaagaaagatgaggaaaagg 188 Query: 212 ccctgaaggagctgaaggccaaggctggccagaagggtgcgctgggaggatctggtctga 271 |||| || ||||| | |||||||| |||||||| | | ||||| ||||| || | Sbjct: 189 cccttaaagagcttagagccaaggcatcgcagaagggatcctttggaggttctggactta 248 Query: 272 agaagagtgggaagaaatga 291 |||||||||| ||||||||| Sbjct: 249 agaagagtggcaagaaatga 268
>gb|AY093387.1| Arabidopsis thaliana unknown protein (At1g15270) mRNA, complete cds Length = 307 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 152 agaaggactacgacgagaatgacctggcatacctccagaagaagaaggatgagcaaaagg 211 ||||||| |||||||||| |||| | || || | ||||||||||| |||||| |||||| Sbjct: 56 agaaggaatacgacgagactgacttagctaacattcagaagaagaaagatgaggaaaagg 115 Query: 212 ccctgaaggagctgaaggccaaggctggccagaagggtgcgctgggaggatctggtctga 271 |||| || ||||| | |||||||| |||||||| | | ||||| ||||| || | Sbjct: 116 cccttaaagagcttagagccaaggcatcgcagaagggatcctttggaggttctggactta 175 Query: 272 agaagagtgggaagaaatga 291 |||||||||| ||||||||| Sbjct: 176 agaagagtggcaagaaatga 195
>gb|AY062704.1| Arabidopsis thaliana Unknown protein (At1g15270; F9L1.21) mRNA, complete cds Length = 389 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 152 agaaggactacgacgagaatgacctggcatacctccagaagaagaaggatgagcaaaagg 211 ||||||| |||||||||| |||| | || || | ||||||||||| |||||| |||||| Sbjct: 132 agaaggaatacgacgagactgacttagctaacattcagaagaagaaagatgaggaaaagg 191 Query: 212 ccctgaaggagctgaaggccaaggctggccagaagggtgcgctgggaggatctggtctga 271 |||| || ||||| | |||||||| |||||||| | | ||||| ||||| || | Sbjct: 192 cccttaaagagcttagagccaaggcatcgcagaagggatcctttggaggttctggactta 251 Query: 272 agaagagtgggaagaaatga 291 |||||||||| ||||||||| Sbjct: 252 agaagagtggcaagaaatga 271
>gb|AF336925.1| Arabidopsis thaliana clone C00250 (e) unknown protein (At1g15270) mRNA, complete cds Length = 195 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 152 agaaggactacgacgagaatgacctggcatacctccagaagaagaaggatgagcaaaagg 211 ||||||| |||||||||| |||| | || || | ||||||||||| |||||| |||||| Sbjct: 56 agaaggaatacgacgagactgacttagctaacattcagaagaagaaagatgaggaaaagg 115 Query: 212 ccctgaaggagctgaaggccaaggctggccagaagggtgcgctgggaggatctggtctga 271 |||| || ||||| | |||||||| |||||||| | | ||||| ||||| || | Sbjct: 116 cccttaaagagcttagagccaaggcatcgcagaagggatcctttggaggttctggactta 175 Query: 272 agaagagtgggaagaaatga 291 |||||||||| ||||||||| Sbjct: 176 agaagagtggcaagaaatga 195
>gb|AY086188.1| Arabidopsis thaliana clone 22166 mRNA, complete sequence Length = 409 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 152 agaaggactacgacgagaatgacctggcatacctccagaagaagaaggatgagcaaaagg 211 ||||||| |||||||||| |||| | || || | ||||||||||| |||||| |||||| Sbjct: 138 agaaggaatacgacgagactgacttagctaacattcagaagaagaaagatgaggaaaagg 197 Query: 212 ccctgaaggagctgaaggccaaggctggccagaagggtgcgctgggaggatctggtctga 271 |||| || ||||| | |||||||| |||||||| | | ||||| ||||| || | Sbjct: 198 cccttaaagagcttagagccaaggcatcgcagaagggatcctttggaggttctggactta 257 Query: 272 agaagagtgggaagaaatga 291 |||||||||| ||||||||| Sbjct: 258 agaagagtggcaagaaatga 277
>emb|AJ843980.1| Plantago major mRNA for hypothetical protein Length = 454 Score = 56.0 bits (28), Expect = 1e-04 Identities = 84/102 (82%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 190 aagaagaaggatgagcaaaaggccctgaaggagctgaaggccaaggctggccagaagggt 249 ||||| || |||||| ||||||| || |||||||| ||||| |||||| ||||| || Sbjct: 175 aagaaaaaagatgaggaaaaggctctcaaggagcttaaggcaaaggct---cagaaagga 231 Query: 250 gcgctgggaggatctggtctgaagaagagtgggaagaaatga 291 || || ||||| ||||||||||||||||||| || |||||| Sbjct: 232 gctcttggaggtgctggtctgaagaagagtggcaaaaaatga 273
>gb|DQ306777.1| Hevea brasiliensis isolate SSH48 mRNA sequence Length = 327 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 187 cagaagaagaaggatgagcaaaaggccctgaaggagctgaaggccaaggctggccagaag 246 |||||||| ||||| ||| ||||||| || |||||||| | ||||||||| | ||||| Sbjct: 98 cagaagaaaaaggaagaggaaaaggcacttaaggagcttagggccaaggcagcacagaaa 157 Query: 247 ggtgcgctgggaggatctggtctgaagaagagtgggaagaaatgag 292 || | | ||||| ||||| || ||||||||||| |||||||||| Sbjct: 158 ggaactttcggaggttctgggctcaagaagagtggaaagaaatgag 203
>emb|BX649455.14| Zebrafish DNA sequence from clone CH211-151J12 in linkage group 4, complete sequence Length = 116689 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 319 aaaatgataatctatctatctacctatct 347 |||||||||||||||||||||| |||||| Sbjct: 8904 aaaatgataatctatctatctatctatct 8932
>emb|BX818071.1|CNS0ACMY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL5ZA12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 350 Score = 50.1 bits (25), Expect = 0.008 Identities = 61/73 (83%) Strand = Plus / Plus Query: 152 agaaggactacgacgagaatgacctggcatacctccagaagaagaaggatgagcaaaagg 211 ||||||| |||||||||| |||| | || || | ||||||||||| |||||| |||||| Sbjct: 100 agaaggaatacgacgagactgacttagctaacattcagaagaagaaagatgaggaaaagg 159 Query: 212 ccctgaaggagct 224 |||| || ||||| Sbjct: 160 cccttaaagagct 172
>emb|BX818255.1|CNS0ACF6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL6ZA12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 360 Score = 50.1 bits (25), Expect = 0.008 Identities = 85/105 (80%) Strand = Plus / Plus Query: 187 cagaagaagaaggatgagcaaaaggccctgaaggagctgaaggccaaggctggccagaag 246 ||||||||||| |||||| |||||||||| || ||||| | |||||||| |||||| Sbjct: 135 cagaagaagaaagatgaggaaaaggcccttaaagagcttagagccaaggcatcgcagaag 194 Query: 247 ggtgcgctgggaggatctggtctgaagaagagtgggaagaaatga 291 || | | ||||| ||||| || ||||||||||| ||||||||| Sbjct: 195 ggatcctttggaggttctggacttaagaagagtggcaagaaatga 239
>gb|AC166990.3| Mus musculus BAC clone RP24-173K24 from chromosome 12, complete sequence Length = 144985 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgtgt 351 |||||||||||||||||||||||| Sbjct: 24949 atctatctatctacctatctgtgt 24926
>gb|AC164121.3| Mus musculus BAC clone RP24-406J12 from chromosome 12, complete sequence Length = 169925 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgtgt 351 |||||||||||||||||||||||| Sbjct: 118017 atctatctatctacctatctgtgt 118040
>gb|AC124542.4| Mus musculus BAC clone RP23-259B10 from 12, complete sequence Length = 179046 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgtgt 351 |||||||||||||||||||||||| Sbjct: 60959 atctatctatctacctatctgtgt 60936
>gb|AC158523.2| Mus musculus BAC clone RP23-371I11 from chromosome 12, complete sequence Length = 176139 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgtgt 351 |||||||||||||||||||||||| Sbjct: 117411 atctatctatctacctatctgtgt 117388
>ref|NM_001051203.1| Oryza sativa (japonica cultivar-group) Os01g0824900 (Os01g0824900) mRNA, complete cds Length = 1050 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 41 cgccccaccgtcgtcgcggctccagct 67 ||||| ||||||||||||||||||||| Sbjct: 791 cgcccaaccgtcgtcgcggctccagct 765
>emb|CT988416.1| Eucalyptus globulus EST from juvenile versus mature wood and mature versus juvenile wood SSH libraries Length = 452 Score = 46.1 bits (23), Expect = 0.13 Identities = 83/103 (80%) Strand = Plus / Minus Query: 190 aagaagaaggatgagcaaaaggccctgaaggagctgaaggccaaggctggccagaagggt 249 ||||||||||| || | ||||| |||||||||| || | ||||||| |||||||| Sbjct: 425 aagaagaaggaagaagagaaggcattgaaggagcttaaagtcaaggctacgcagaaggga 366 Query: 250 gcgctgggaggatctggtctgaagaagagtgggaagaaatgag 292 | || ||||||||||| || ||||||||||| ||||| |||| Sbjct: 365 tcccttggaggatctggactcaagaagagtggcaagaagtgag 323
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 41 cgccccaccgtcgtcgcggctccagct 67 ||||| ||||||||||||||||||||| Sbjct: 35241925 cgcccaaccgtcgtcgcggctccagct 35241899 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 327 aatctatctatctacctatct 347 ||||||||||||||||||||| Sbjct: 25368941 aatctatctatctacctatct 25368961 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgtgt 351 ||||||||||||| |||||||||| Sbjct: 22824511 atctatctatctatctatctgtgt 22824534
>gb|AC153014.4| Mus musculus BAC clone RP23-203I6 from chromosome 19, complete sequence Length = 195382 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 325 ataatctatctatctacctatct 347 ||||||||||||||||||||||| Sbjct: 38682 ataatctatctatctacctatct 38660
>dbj|AP003230.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031D02 Length = 183692 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 41 cgccccaccgtcgtcgcggctccagct 67 ||||| ||||||||||||||||||||| Sbjct: 121009 cgcccaaccgtcgtcgcggctccagct 120983
>emb|CR380956.1| Candida glabrata strain CBS138 chromosome J complete sequence Length = 1192501 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 118 aaggccaagccgctcaagcaggccaag 144 |||||||||||| |||||||||||||| Sbjct: 248639 aaggccaagccggtcaagcaggccaag 248613 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 119 aggccaagccgctcaagcaggccaag 144 ||||||||||| |||||||||||||| Sbjct: 248548 aggccaagccggtcaagcaggccaag 248523 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 119 aggccaagccgctcaagcaggccaag 144 ||||||||||| |||||||||||||| Sbjct: 248566 aggccaagccggtcaagcaggccaag 248541 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 119 aggccaagccgctcaagcaggccaag 144 ||||||||||| |||||||||||||| Sbjct: 248584 aggccaagccggtcaagcaggccaag 248559 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 119 aggccaagccgctcaagcaggccaag 144 ||||||||||| |||||||||||||| Sbjct: 248602 aggccaagccggtcaagcaggccaag 248577 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 119 aggccaagccgctcaagcaggccaag 144 ||||||||||| |||||||||||||| Sbjct: 248620 aggccaagccggtcaagcaggccaag 248595
>dbj|AP003315.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439E11 Length = 146083 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 41 cgccccaccgtcgtcgcggctccagct 67 ||||| ||||||||||||||||||||| Sbjct: 5786 cgcccaaccgtcgtcgcggctccagct 5760
>dbj|AK061414.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-D05, full insert sequence Length = 1050 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 41 cgccccaccgtcgtcgcggctccagct 67 ||||| ||||||||||||||||||||| Sbjct: 791 cgcccaaccgtcgtcgcggctccagct 765
>ref|XM_447815.1| Candida glabrata CBS138, CAGL0J02530g partial mRNA Length = 2265 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 118 aaggccaagccgctcaagcaggccaag 144 |||||||||||| |||||||||||||| Sbjct: 1652 aaggccaagccggtcaagcaggccaag 1678 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 119 aggccaagccgctcaagcaggccaag 144 ||||||||||| |||||||||||||| Sbjct: 1671 aggccaagccggtcaagcaggccaag 1696 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 119 aggccaagccgctcaagcaggccaag 144 ||||||||||| |||||||||||||| Sbjct: 1689 aggccaagccggtcaagcaggccaag 1714 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 119 aggccaagccgctcaagcaggccaag 144 ||||||||||| |||||||||||||| Sbjct: 1707 aggccaagccggtcaagcaggccaag 1732 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 119 aggccaagccgctcaagcaggccaag 144 ||||||||||| |||||||||||||| Sbjct: 1725 aggccaagccggtcaagcaggccaag 1750 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 119 aggccaagccgctcaagcaggccaag 144 ||||||||||| |||||||||||||| Sbjct: 1743 aggccaagccggtcaagcaggccaag 1768
>gb|AC107648.11| Mus musculus chromosome 19, clone RP23-126M4, complete sequence Length = 210931 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 325 ataatctatctatctacctatct 347 ||||||||||||||||||||||| Sbjct: 38675 ataatctatctatctacctatct 38653
>emb|AL928812.11| Mouse DNA sequence from clone RP23-321B23 on chromosome 2, complete sequence Length = 199019 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 325 ataatctatctatctacctatct 347 ||||||||||||||||||||||| Sbjct: 160118 ataatctatctatctacctatct 160140 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 325 ataatctatctatctacctatct 347 ||||||||||||||||||||||| Sbjct: 160383 ataatctatctatctacctatct 160405 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 325 ataatctatctatctacctatct 347 ||||||||||||||||||||||| Sbjct: 160580 ataatctatctatctacctatct 160602
>gb|AC102396.29| Mus musculus chromosome 3, clone RP24-169F23, complete sequence Length = 139158 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 109237 atctatctatctacctatctgt 109258
>emb|CT841527.2| Pan troglodytes chromosome X clone CH251-168G12 map Xq28, complete sequence Length = 165710 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 29078 atctatctatctacctatctgt 29099
>gb|DQ247993.1| Sorex araneus microsatellite D106 sequence Length = 648 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 129 atctatctatctacctatctgt 150
>gb|DQ139857.1| Coreius heterodon microsatellite CH12 sequence Length = 225 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 326 taatctatctatctacctatct 347 |||||||||||||||||||||| Sbjct: 182 taatctatctatctacctatct 161
>gb|AC147479.17| Mus musculus chromosome 17, clone RP24-178C19, complete sequence Length = 178820 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 322 atgataatctatctatctacctatct 347 ||||| |||||||||||||||||||| Sbjct: 54706 atgatcatctatctatctacctatct 54681
>gb|AC151292.2| Mus musculus BAC clone RP23-138P14 from chromosome 17, complete sequence Length = 216585 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 322 atgataatctatctatctacctatct 347 ||||| |||||||||||||||||||| Sbjct: 179290 atgatcatctatctatctacctatct 179315
>gb|AC108768.14| Mus musculus chromosome 8, clone RP23-398L15, complete sequence Length = 209808 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 33606 atctatctatctacctatctgt 33585
>gb|AF393670.1| Siphateles bicolor obesa isolate G87 microsatellite sequence Length = 381 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 125 atctatctatctacctatctgt 104
>gb|AF378281.1| Pangasius sp. ZZSH-2001 microsatellite PSP-G 565 sequence Length = 539 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 310 atctatctatctacctatctgt 331
>gb|L29074.1|HUMFMR1S Homo sapiens fragile X mental retardation syndrome protein (FMR1) gene, alternative splice products, complete cds; and pseudogene, complete sequence Length = 185775 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 134042 atctatctatctacctatctgt 134063
>gb|AC116839.8| Mus musculus chromosome 8, clone RP24-390L13, complete sequence Length = 142874 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 18719 atctatctatctacctatctgt 18698
>gb|AC146698.10| Mus musculus chromosome 13, clone RP24-342B2, complete sequence Length = 122164 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 91931 atctatctatctacctatctgt 91910
>gb|AC145898.4| Pan troglodytes BAC clone RP43-9D19 from 7, complete sequence Length = 156789 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 45845 atctatctatctacctatctgt 45866
>gb|AC156620.10| Mus musculus chromosome 5, clone RP23-80G18, complete sequence Length = 248320 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 326 taatctatctatctacctatct 347 |||||||||||||||||||||| Sbjct: 50008 taatctatctatctacctatct 49987
>gb|AC146457.3| Pan troglodytes BAC clone CH251-330N17 from Y, complete sequence Length = 162813 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 43405 atctatctatctacctatctgt 43426
>gb|AC157583.9| Mus musculus chromosome 15, clone RP24-367L4, complete sequence Length = 185401 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 47958 atctatctatctacctatctgt 47979 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 48151 atctatctatctacctatctgt 48172 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatct 347 |||||||||||||||||||| Sbjct: 48047 atctatctatctacctatct 48066 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 ctatctatctacctatctgt 349 |||||||||||||||||||| Sbjct: 48061 ctatctatctacctatctgt 48080 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatct 347 |||||||||||||||||||| Sbjct: 48198 atctatctatctacctatct 48217
>gb|AC074225.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-78M3, complete sequence Length = 197412 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 33255 atctatctatctacctatctgt 33276
>gb|AC134459.4| Mus musculus BAC clone RP23-360L15 from chromosome 8, complete sequence Length = 211773 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 123781 atctatctatctacctatctgt 123760
>gb|AC099704.7| Mus musculus chromosome 15, clone RP23-256A2, complete sequence Length = 204704 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 126140 atctatctatctacctatctgt 126161 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatct 347 |||||||||||||||||||| Sbjct: 64366 atctatctatctacctatct 64385 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatct 347 |||||||||||||||||||| Sbjct: 64396 atctatctatctacctatct 64415
>gb|AC132344.3| Mus musculus BAC clone RP24-177A17 from chromosome 13, complete sequence Length = 169661 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 5508 atctatctatctacctatctgt 5487
>gb|AC146257.3| Pan troglodytes BAC clone CH251-113A6 from Y, complete sequence Length = 174522 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 58136 atctatctatctacctatctgt 58157
>gb|AC123948.4| Mus musculus BAC clone RP23-105C3 from chromosome 10, complete sequence Length = 214819 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 76626 atctatctatctacctatctgt 76605
>gb|AC131773.3| Mus musculus BAC clone RP24-308A19 from chromosome 15, complete sequence Length = 168423 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 13242 atctatctatctacctatctgt 13221 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatct 347 |||||||||||||||||||| Sbjct: 74986 atctatctatctacctatct 74967 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatct 347 |||||||||||||||||||| Sbjct: 75016 atctatctatctacctatct 74997
>gb|AC124537.5| Mus musculus BAC clone RP23-333J6 from chromosome 13, complete sequence Length = 186870 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 151002 atctatctatctacctatctgt 150981
>gb|AC009192.72| Mus musculus strain 129/Sv clone ct7-555d9 map 6, complete sequence Length = 120530 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 58479 atctatctatctacctatctgt 58458
>gb|AC098888.4| Mus musculus BAC clone RP23-122N8 from 8, complete sequence Length = 229247 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 221301 atctatctatctacctatctgt 221280 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatct 347 |||||||||||||||||||| Sbjct: 17340 atctatctatctacctatct 17321
>gb|AC164406.5| Mus musculus chromosome 3, clone RP24-391L20, complete sequence Length = 134552 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 130752 atctatctatctacctatctgt 130731
>gb|AC107753.10| Mus musculus chromosome 15, clone RP23-243P15, complete sequence Length = 173814 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 107625 atctatctatctacctatctgt 107646 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 107822 atctatctatctacctatctgt 107843 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatct 347 |||||||||||||||||||| Sbjct: 107718 atctatctatctacctatct 107737 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 ctatctatctacctatctgt 349 |||||||||||||||||||| Sbjct: 107732 ctatctatctacctatctgt 107751 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatct 347 |||||||||||||||||||| Sbjct: 107869 atctatctatctacctatct 107888
>gb|AC162930.5| Mus musculus BAC clone RP23-221B16 from chromosome 8, complete sequence Length = 222939 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 326 taatctatctatctacctatct 347 |||||||||||||||||||||| Sbjct: 156121 taatctatctatctacctatct 156100
>gb|AC012397.33| Mus musculus strain 129/Sv clone ct7-369p18 map 6, complete sequence Length = 140198 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 102337 atctatctatctacctatctgt 102316
>gb|AC160462.6| Mus musculus chromosome 1, clone RP23-225K21, complete sequence Length = 197253 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 326 taatctatctatctacctatct 347 |||||||||||||||||||||| Sbjct: 57227 taatctatctatctacctatct 57248 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatct 347 |||||||||||||||||||| Sbjct: 45901 atctatctatctacctatct 45920
>gb|AC101883.6| Mus musculus chromosome 1, clone RP23-402F17, complete sequence Length = 191721 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 138196 atctatctatctacctatctgt 138217 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatct 347 |||||||||||||||||||| Sbjct: 173236 atctatctatctacctatct 173255
>gb|AC163018.3| Mus musculus chromosome 15, clone RP24-366J14, complete sequence Length = 175394 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 121911 atctatctatctacctatctgt 121932 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 122104 atctatctatctacctatctgt 122125 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatct 347 |||||||||||||||||||| Sbjct: 122000 atctatctatctacctatct 122019 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 ctatctatctacctatctgt 349 |||||||||||||||||||| Sbjct: 122014 ctatctatctacctatctgt 122033 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatct 347 |||||||||||||||||||| Sbjct: 122151 atctatctatctacctatct 122170
>gb|AC153146.5| Mus musculus BAC clone RP23-217F11 from chromosome 8, complete sequence Length = 212278 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 36141 atctatctatctacctatctgt 36120 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatct 347 |||||||||||||||||||| Sbjct: 204428 atctatctatctacctatct 204447
>gb|AC157360.9| Mus musculus chromosome 8, clone RP23-420E22, complete sequence Length = 195633 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 18257 atctatctatctacctatctgt 18278
>dbj|AK165391.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F430215H12 product:PRP4 pre-mRNA processing factor 4 homolog B (yeast), full insert sequence Length = 1729 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 1463 atctatctatctacctatctgt 1484
>gb|AC087530.8| Homo sapiens chromosome 17, clone RP11-313F15, complete sequence Length = 170507 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 321 aatgataatctatctatctacctatc 346 ||||| |||||||||||||||||||| Sbjct: 38452 aatgagaatctatctatctacctatc 38477
>gb|AC114757.3| Homo sapiens BAC clone RP11-328N19 from 4, complete sequence Length = 61528 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 10435 atctatctatctacctatctgt 10456
>dbj|AK045104.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130033A13 product:unclassifiable, full insert sequence Length = 1689 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 326 taatctatctatctacctatct 347 |||||||||||||||||||||| Sbjct: 1179 taatctatctatctacctatct 1200
>dbj|AK017905.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830407E08 product:unclassifiable, full insert sequence Length = 1577 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 1179 atctatctatctacctatctgt 1158
>emb|BX890551.14| Zebrafish DNA sequence from clone CH211-232K18, complete sequence Length = 151758 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 69691 atctatctatctacctatctgt 69670
>gb|AF393187.1| Oncorhynchus tshawytscha microsatellite OtsG68 sequence Length = 483 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 233 atctatctatctacctatctgt 212
>gb|AC087240.17| Homo sapiens 12p BAC RP11-752F20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 198068 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 130117 atctatctatctacctatctgt 130138
>gb|AC004840.4| Homo sapiens PAC clone RP4-607J2 from 7, complete sequence Length = 149397 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 326 taatctatctatctacctatct 347 |||||||||||||||||||||| Sbjct: 78541 taatctatctatctacctatct 78562
>gb|AC006054.2| Homo sapiens Xq28 BAC GS1-382P7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 143738 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 135310 atctatctatctacctatctgt 135289
>gb|AC099519.2| Homo sapiens chromosome 5 clone RP11-695O10, complete sequence Length = 206163 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 64681 atctatctatctacctatctgt 64702
>gb|AC099504.2| Homo sapiens chromosome 5 clone RP11-219L6, complete sequence Length = 162841 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 11053 atctatctatctacctatctgt 11074
>gb|AC008911.6| Homo sapiens chromosome 5 clone CTD-2268J5, complete sequence Length = 154963 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 20545 atctatctatctacctatctgt 20524
>gb|AC091901.3| Homo sapiens chromosome 5 clone RP11-167P20, complete sequence Length = 176633 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 53205 atctatctatctacctatctgt 53226
>dbj|BS000588.2| Pan troglodytes chromosome Y clone:PTB-443K18, complete sequence Length = 151892 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 120533 atctatctatctacctatctgt 120554
>dbj|BS000583.2| Pan troglodytes chromosome Y clone:PTB-614F22, complete sequence Length = 158476 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 87774 atctatctatctacctatctgt 87753
>dbj|BS000650.1| Pan troglodytes chromosome Y clone: PTBY-008P10, complete sequence Length = 87031 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 11961 atctatctatctacctatctgt 11982
>dbj|BS000591.1| Pan troglodytes chromosome Y clone:PTB-113D22, complete sequence Length = 188847 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 185798 atctatctatctacctatctgt 185777
>emb|AL353745.7| Human DNA sequence from clone RP11-560D2 on chromosome 9 Contains a ferritin, light polypeptide-like pseudogene and a heat shock cognate 71 KDA protein pseudogene, complete sequence Length = 174850 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 30840 atctatctatctacctatctgt 30819
>gb|AC133012.5| Homo sapiens chromosome 17, clone RP11-582A10, complete sequence Length = 153014 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 321 aatgataatctatctatctacctatc 346 ||||| |||||||||||||||||||| Sbjct: 133770 aatgagaatctatctatctacctatc 133745
>emb|CR626877.10| Zebrafish DNA sequence from clone DKEYP-114F9 in linkage group 19, complete sequence Length = 173824 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 66554 atctatctatctacctatctgt 66575
>gb|AC008809.6|AC008809 Homo sapiens chromosome 5 clone CTD-2093D7, complete sequence Length = 47364 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 41496 atctatctatctacctatctgt 41475
>emb|AL772209.5| Zebrafish DNA sequence from clone DKEY-49F1 in linkage group 17, complete sequence Length = 202805 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 322 atgataatctatctatctacctatct 347 ||||||||||||||||||| |||||| Sbjct: 29114 atgataatctatctatctatctatct 29139 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatct 347 |||||||||||||||||||| Sbjct: 29550 atctatctatctacctatct 29569
>gb|AC114612.13| Mus musculus chromosome 7, clone RP24-80O23, complete sequence Length = 189471 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 54039 atctatctatctacctatctgt 54060
>emb|AL645909.11| Mouse DNA sequence from clone RP23-216O18 on chromosome 11 Contains the Lcp2 gene for lymphocyte cytosolic protein 2, the 5' end of a novel gene and a novel gene, complete sequence Length = 186087 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 37151 atctatctatctacctatctgt 37172
>emb|AL732599.5| Mouse DNA sequence from clone RP24-312B5 on chromosome 4 Contains the 5' end of the Tnfsf8 gene for tumor necrosis factor (ligand) superfamily member 8 and a ribosomal protein L17 (Rpl17) pseudogene, complete sequence Length = 95217 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 91501 atctatctatctacctatctgt 91480
>gb|AC155263.2| Mus musculus BAC clone RP23-415I11 from chromosome 13, complete sequence Length = 202801 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 86741 atctatctatctacctatctgt 86720
>gb|AC154804.2| Mus musculus BAC clone RP24-506H9 from chromosome 16, complete sequence Length = 176299 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 91537 atctatctatctacctatctgt 91558
>gb|AC010729.8| Homo sapiens BAC clone RP11-350H23 from 2, complete sequence Length = 191934 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 58475 atctatctatctacctatctgt 58454 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 tctatctatctacctatctg 348 |||||||||||||||||||| Sbjct: 58635 tctatctatctacctatctg 58616
>gb|AC066584.6|AC066584 Homo sapiens chromosome 3 clone RP11-244G3 map 3p, complete sequence Length = 155825 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 98723 atctatctatctacctatctgt 98702
>gb|AC117479.4| Homo sapiens 3 BAC RP11-490P18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 145285 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 91055 atctatctatctacctatctgt 91076
>gb|AC007043.3|AC007043 Homo sapiens BAC clone RP11-507E21 from Y, complete sequence Length = 107402 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 79865 atctatctatctacctatctgt 79844
>gb|AC015971.4| Homo sapiens BAC clone RP11-269K22 from 2, complete sequence Length = 163852 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 11282 atctatctatctacctatctgt 11261
>gb|AC018493.6|AC018493 Homo sapiens chromosome 3 clone RP11-163M22 map 3p, complete sequence Length = 180299 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 149206 atctatctatctacctatctgt 149227
>gb|AC007097.4|AC007097 Homo sapiens BAC clone RP11-332E22 from 7q35-q36, complete sequence Length = 142830 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 40450 atctatctatctacctatctgt 40471
>gb|AC007034.4|AC007034 Homo sapiens BAC clone RP11-99M1 from Y, complete sequence Length = 149198 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 4207 atctatctatctacctatctgt 4228
>gb|AC084211.19| Homo sapiens 3 BAC RP11-338L18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 154026 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 326 taatctatctatctacctatct 347 |||||||||||||||||||||| Sbjct: 34821 taatctatctatctacctatct 34800
>gb|AC135105.11| Mus musculus strain C57BL/6J clone rp23-354f7, complete sequence Length = 209282 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 208717 atctatctatctacctatctgt 208696
>gb|AC084273.20| Mus musculus strain C57BL/6J chromosome 6 clone rp23-313e8, complete sequence Length = 182818 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 20315 atctatctatctacctatctgt 20294
>gb|AC011327.17|AC011327 Homo sapiens 3 BAC RP11-77I5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 168812 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 137712 atctatctatctacctatctgt 137733
>gb|AC113036.8| Mus musculus chromosome 13, clone RP23-223B10, complete sequence Length = 190133 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 326 taatctatctatctacctatct 347 |||||||||||||||||||||| Sbjct: 64519 taatctatctatctacctatct 64540
>emb|BX088527.5| Zebrafish DNA sequence from clone DKEY-200F8 in linkage group 1, complete sequence Length = 148904 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 113602 atctatctatctacctatctgt 113581
>gb|AC120854.15| Mus musculus chromosome 7, clone RP23-329B6, complete sequence Length = 205102 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 188500 atctatctatctacctatctgt 188521
>dbj|AP002355.3| Homo sapiens genomic DNA, chromosome 11 clone:CTD-3183N4, complete sequence Length = 56332 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 326 taatctatctatctacctatct 347 |||||||||||||||||||||| Sbjct: 28366 taatctatctatctacctatct 28387
>gb|AC011595.13| Homo sapiens 12 BAC RP11-114F10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 152358 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 326 taatctatctatctacctatct 347 |||||||||||||||||||||| Sbjct: 59698 taatctatctatctacctatct 59677 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatct 347 |||||||||||||||||||| Sbjct: 59717 atctatctatctacctatct 59698
>emb|AL928611.9| Mouse DNA sequence from clone RP23-263O5 on chromosome 2, complete sequence Length = 199317 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 171803 atctatctatctacctatctgt 171782
>emb|CT025521.10| Mouse DNA sequence from clone RP23-337J16 on chromosome 16, complete sequence Length = 200017 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 207 aaaggccctgaaggagctgaag 228 |||||||||||||||||||||| Sbjct: 105965 aaaggccctgaaggagctgaag 105986
>gb|AC132128.3| Mus musculus BAC clone RP23-409E12 from 8, complete sequence Length = 183872 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 147841 atctatctatctacctatctgt 147820
>gb|AC068905.37| Mus musculus strain C57BL/6J chromosome 9 clone rp23-222i2, complete sequence Length = 185413 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 80480 atctatctatctacctatctgt 80501
>emb|AL806510.12| Mouse DNA sequence from clone RP23-155P8 on chromosome 4, complete sequence Length = 95087 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 89379 atctatctatctacctatctgt 89400 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatct 347 |||||||||||||||||||| Sbjct: 89363 atctatctatctacctatct 89382
>emb|AL805910.7| Mouse DNA sequence from clone RP23-144K17 on chromosome 4, complete sequence Length = 200933 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 107326 atctatctatctacctatctgt 107347
>emb|AL928551.8| Mouse DNA sequence from clone RP23-246P12 on chromosome 4, complete sequence Length = 215620 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 189773 atctatctatctacctatctgt 189752
>gb|DQ279241.1| Didelphis virginiana clone voe8 microsatellite sequence Length = 406 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 280 atctatctatctacctatctgt 301
>gb|DQ279234.1| Didelphis virginiana clone vod6 microsatellite sequence Length = 372 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 246 atctatctatctacctatctgt 267
>gb|AC171111.2| Mus musculus BAC clone RP24-131J20 from chromosome 17, complete sequence Length = 167872 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 322 atgataatctatctatctacctatct 347 ||||| |||||||||||||||||||| Sbjct: 151413 atgatcatctatctatctacctatct 151388
>gb|AC023485.6| Homo sapiens chromosome 3 clone RP11-489D19 map 3p, complete sequence Length = 179304 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgt 349 |||||||||||||||||||||| Sbjct: 122196 atctatctatctacctatctgt 122175
>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence Length = 23011544 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctg 348 ||||||||||||||||||||| Sbjct: 9691920 atctatctatctacctatctg 9691900 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatct 347 |||||||||||||||||||| Sbjct: 20018236 atctatctatctacctatct 20018255 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatct 347 |||||||||||||||||||| Sbjct: 20018300 atctatctatctacctatct 20018319
>emb|CR926131.10| Zebrafish DNA sequence from clone DKEY-162M2 in linkage group 20, complete sequence Length = 193882 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgtgtc 352 ||||||||||||| ||||||||||| Sbjct: 104848 atctatctatctatctatctgtgtc 104824
>emb|CR394571.7| Zebrafish DNA sequence from clone CH211-180M12 in linkage group 21, complete sequence Length = 142709 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 325 ataatctatctatctacctatctgt 349 |||||||||||||||| |||||||| Sbjct: 127336 ataatctatctatctatctatctgt 127312
>emb|CR932437.5| Zebrafish DNA sequence from clone CH211-153B4 in linkage group 10, complete sequence Length = 51290 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgtgtc 352 ||||||||||||| ||||||||||| Sbjct: 3897 atctatctatctatctatctgtgtc 3873
>gb|AC187705.1| Gasterosteus aculeatus clone VMRC28-105C14, complete sequence Length = 151567 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctg 348 ||||||||||||||||||||| Sbjct: 54686 atctatctatctacctatctg 54706
>emb|CT985437.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 396 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 256 ggaggatctggtctgaagaagagtgggaagaaatgag 292 ||||||||||| || ||||||||||| ||||| |||| Sbjct: 172 ggaggatctggactcaagaagagtggcaagaagtgag 208
>emb|CT981528.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 396 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 256 ggaggatctggtctgaagaagagtgggaagaaatgag 292 ||||||||||| || ||||||||||| ||||| |||| Sbjct: 172 ggaggatctggactcaagaagagtggcaagaagtgag 208
>emb|BX470205.12| Zebrafish DNA sequence from clone DKEYP-118B7 in linkage group 9, complete sequence Length = 41140 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgtgtc 352 ||||||||||||| ||||||||||| Sbjct: 25241 atctatctatctatctatctgtgtc 25217
>gb|AC122309.5| Mus musculus BAC clone RP23-293G2 from chromosome 14, complete sequence Length = 208443 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 327 aatctatctatctacctatct 347 ||||||||||||||||||||| Sbjct: 142674 aatctatctatctacctatct 142654
>gb|AC151736.6| Mus musculus BAC clone RP23-9L16 from chromosome 8, complete sequence Length = 239812 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 326 taatctatctatctacctatc 346 ||||||||||||||||||||| Sbjct: 92636 taatctatctatctacctatc 92656
>gb|AC139293.4| Mus musculus BAC clone RP24-381N4 from chromosome 8, complete sequence Length = 161248 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgtgtc 352 ||||||||||||| ||||||||||| Sbjct: 96592 atctatctatctatctatctgtgtc 96616
>gb|AF101045.1| Oryza sativa (japonica cultivar-group) putative ADP-glucose pyrophosphorylase subunit SH2 and putative transcription factor X1, putative transcription factor X2 and putative NADPH-dependent reductase A1 genes, complete cds Length = 29877 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 327 aatctatctatctacctatct 347 ||||||||||||||||||||| Sbjct: 17157 aatctatctatctacctatct 17177
>gb|U70541.1|OSU70541 Oryza sativa (indica cultivar-group) putative ADP-glucose pyrophosphorylase subunit SH2 and putative NADPH-dependent reductase A1 genes, complete cds Length = 30034 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 327 aatctatctatctacctatct 347 ||||||||||||||||||||| Sbjct: 17386 aatctatctatctacctatct 17406
>gb|AC101948.10| Mus musculus chromosome 15, clone RP24-139K14, complete sequence Length = 182534 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctg 348 ||||||||||||||||||||| Sbjct: 46238 atctatctatctacctatctg 46258
>gb|AC115906.6| Mus musculus chromosome 8, clone RP24-476M14, complete sequence Length = 145246 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctg 348 ||||||||||||||||||||| Sbjct: 21215 atctatctatctacctatctg 21195
>gb|AC091807.4| Homo sapiens chromosome X clone RP6-186E3 map p11.4, complete sequence Length = 172150 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgtgtc 352 ||||||||||||| ||||||||||| Sbjct: 115638 atctatctatctatctatctgtgtc 115662
>gb|AC104275.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_C10, complete sequence Length = 138209 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 325 ataatctatctatctacctatctgt 349 |||||||||||||||||| |||||| Sbjct: 85123 ataatctatctatctacccatctgt 85099
>gb|AC149072.1| x. tropicalis BAC clone ISB1-341L17 containing genes for vex1 and vent1, complete sequence Length = 65797 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgtgtc 352 ||||||||||||| ||||||||||| Sbjct: 12389 atctatctatctatctatctgtgtc 12413
>gb|AC161206.10| Mus musculus chromosome 15, clone RP24-299A13, complete sequence Length = 165791 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 325 ataatctatctatctacctatctgt 349 |||||||||||||||| |||||||| Sbjct: 132935 ataatctatctatctatctatctgt 132959
>gb|AC147135.2| Mus musculus BAC clone RP24-475E12 from chromosome Y, complete sequence Length = 222469 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 319 aaaatgataatctatctatctacctatct 347 |||||||| ||||||||||||| |||||| Sbjct: 140630 aaaatgattatctatctatctatctatct 140658
>gb|AC139847.3| Mus musculus BAC clone RP23-387P21 from chromosome 3, complete sequence Length = 203824 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctg 348 ||||||||||||||||||||| Sbjct: 109893 atctatctatctacctatctg 109913
>gb|AC137588.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0060K21, complete sequence Length = 153973 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 325 ataatctatctatctacctatctgt 349 |||||||||||||||| |||||||| Sbjct: 104048 ataatctatctatctatctatctgt 104024
>gb|AC165079.2| Mus musculus BAC clone RP24-92K17 from chromosome 16, complete sequence Length = 156977 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 327 aatctatctatctacctatct 347 ||||||||||||||||||||| Sbjct: 38748 aatctatctatctacctatct 38768 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatct 347 |||||||||||||||||||| Sbjct: 38797 atctatctatctacctatct 38816
>gb|AC158776.5| Mus musculus chromosome 15, clone RP23-261G10, complete sequence Length = 192769 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctg 348 ||||||||||||||||||||| Sbjct: 98778 atctatctatctacctatctg 98798
>gb|AC131756.3| Mus musculus BAC clone RP24-199J23 from chromosome 19, complete sequence Length = 175604 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 325 ataatctatctatctacctatctgt 349 |||||||||||||||| |||||||| Sbjct: 79455 ataatctatctatctatctatctgt 79431
>gb|AC140386.4| Mus musculus BAC clone RP24-88H19 from chromosome Y, complete sequence Length = 222469 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 319 aaaatgataatctatctatctacctatct 347 |||||||| ||||||||||||| |||||| Sbjct: 140630 aaaatgattatctatctatctatctatct 140658
>gb|AC115798.14| Mus musculus chromosome 8, clone RP23-406D18, complete sequence Length = 225828 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgtgtc 352 ||||||||||||| ||||||||||| Sbjct: 206965 atctatctatctatctatctgtgtc 206941
>gb|AC126932.4| Mus musculus BAC clone RP24-80G20 from chromosome 3, complete sequence Length = 214712 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 323 tgataatctatctatctacctatct 347 |||||||||||||||||| |||||| Sbjct: 10063 tgataatctatctatctatctatct 10087 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatct 347 |||||||||||||||||||| Sbjct: 10100 atctatctatctacctatct 10119
>gb|AC127240.3| Mus musculus BAC clone RP24-387H11 from chromosome 8, complete sequence Length = 212579 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctg 348 ||||||||||||||||||||| Sbjct: 186572 atctatctatctacctatctg 186552
>gb|AC131113.4| Mus musculus BAC clone RP24-155C13 from chromosome 3, complete sequence Length = 173268 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 323 tgataatctatctatctacctatct 347 |||||||||||||||||| |||||| Sbjct: 28435 tgataatctatctatctatctatct 28411 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatct 347 |||||||||||||||||||| Sbjct: 28398 atctatctatctacctatct 28379
>gb|AC124607.4| Mus musculus BAC clone RP23-84H10 from chromosome 12, complete sequence Length = 168842 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctg 348 ||||||||||||||||||||| Sbjct: 57837 atctatctatctacctatctg 57857
>gb|AC146608.2| Mus musculus BAC clone RP23-159D24 from chromosome 12, complete sequence Length = 173569 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctg 348 ||||||||||||||||||||| Sbjct: 171893 atctatctatctacctatctg 171873
>gb|AC122239.4| Mus musculus BAC clone RP23-143K14 from chromosome 8, complete sequence Length = 197109 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgtgtc 352 ||||||||||||| ||||||||||| Sbjct: 189037 atctatctatctatctatctgtgtc 189061
>gb|AC121926.3| Mus musculus BAC clone RP24-202B3 from chromosome 10, complete sequence Length = 185398 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgtgtc 352 ||||||||||||| ||||||||||| Sbjct: 141030 atctatctatctatctatctgtgtc 141054
>gb|AF508982.1| Homo sapiens Na+/Ca2+ exchanger isoform 3 (SLC8A3) gene, promoter region and complete cds Length = 145118 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctg 348 ||||||||||||||||||||| Sbjct: 132028 atctatctatctacctatctg 132048
>gb|AC110302.4| Mus musculus BAC clone RP24-194G21 from 12, complete sequence Length = 168601 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 327 aatctatctatctacctatct 347 ||||||||||||||||||||| Sbjct: 100467 aatctatctatctacctatct 100447
>gb|AC116679.9| Mus musculus chromosome 12, clone RP23-391I19, complete sequence Length = 261992 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctg 348 ||||||||||||||||||||| Sbjct: 157359 atctatctatctacctatctg 157379
>gb|AC102317.7| Mus musculus chromosome 18, clone RP24-444M6, complete sequence Length = 194567 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgtgtc 352 |||||||||||||||||||| |||| Sbjct: 56855 atctatctatctacctatctctgtc 56879
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 tttctcgcccccgccgggccc 92 ||||||||||||||||||||| Sbjct: 1116395 tttctcgcccccgccgggccc 1116375
>gb|AC158567.3| Mus musculus chromosome 15, clone RP24-93F2, complete sequence Length = 188718 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctg 348 ||||||||||||||||||||| Sbjct: 23398 atctatctatctacctatctg 23418
>gb|BT009442.1| Triticum aestivum clone wlmk4.pk0025.f7:fis, full insert mRNA sequence Length = 1666 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 ggagggaaggccaagccgctc 132 ||||||||||||||||||||| Sbjct: 38 ggagggaaggccaagccgctc 58
>gb|AC174641.3| Mus musculus BAC clone RP24-406C15 from chromosome y, complete sequence Length = 174265 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 319 aaaatgataatctatctatctacctatct 347 |||||||| ||||||||||||| |||||| Sbjct: 1108 aaaatgattatctatctatctatctatct 1136
>gb|AC120387.5| Mus musculus chromosome 8, clone RP24-299O22, complete sequence Length = 163623 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctg 348 ||||||||||||||||||||| Sbjct: 102206 atctatctatctacctatctg 102186
>gb|AC153013.3| Mus musculus BAC clone RP23-273N8 from chromosome 8, complete sequence Length = 196609 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgtgtc 352 ||||||||||||| ||||||||||| Sbjct: 91693 atctatctatctatctatctgtgtc 91717
>gb|AC100789.2| Homo sapiens chromosome X, clone RP11-907I17, complete sequence Length = 183453 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgtgtc 352 ||||||||||||| ||||||||||| Sbjct: 16333 atctatctatctatctatctgtgtc 16357
>gb|AC092066.4| Homo sapiens chromosome 19 clone CTB-171A8, complete sequence Length = 137411 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctg 348 ||||||||||||||||||||| Sbjct: 122213 atctatctatctacctatctg 122193
>emb|CR847538.15| Zebrafish DNA sequence from clone DKEY-191C17 in linkage group 8, complete sequence Length = 63430 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 327 aatctatctatctacctatct 347 ||||||||||||||||||||| Sbjct: 52585 aatctatctatctacctatct 52565
>gb|AC113402.2| Homo sapiens chromosome 5 clone RP11-454P21, complete sequence Length = 90271 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 325 ataatctatctatctacctatctgt 349 |||||||||||||||| |||||||| Sbjct: 85719 ataatctatctatctatctatctgt 85695
>emb|AL928724.10| Zebrafish DNA sequence from clone CH211-51K14 in linkage group 15, complete sequence Length = 165299 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 326 taatctatctatctacctatc 346 ||||||||||||||||||||| Sbjct: 146208 taatctatctatctacctatc 146228
>emb|CR382335.12| Zebrafish DNA sequence from clone DKEY-56I16 in linkage group 14, complete sequence Length = 159057 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgtgtc 352 ||||||||||||| ||||||||||| Sbjct: 131775 atctatctatctatctatctgtgtc 131751
>gb|AC115100.3| Homo sapiens chromosome 18, clone RP11-237L15, complete sequence Length = 169152 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctg 348 ||||||||||||||||||||| Sbjct: 67565 atctatctatctacctatctg 67545 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatct 347 |||||||||||||||||||| Sbjct: 66918 atctatctatctacctatct 66899
>emb|CR361562.12| Zebrafish DNA sequence from clone CH211-281H24 in linkage group 8, complete sequence Length = 160720 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctg 348 ||||||||||||||||||||| Sbjct: 112544 atctatctatctacctatctg 112524
>gb|AY921043.1| Acipenser sinensis microsatellite AS-076 sequence Length = 260 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 327 aatctatctatctacctatct 347 ||||||||||||||||||||| Sbjct: 85 aatctatctatctacctatct 65
>gb|AC095353.9| Homo sapiens Xp BAC RP11-615L18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 142000 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctg 348 ||||||||||||||||||||| Sbjct: 108036 atctatctatctacctatctg 108056
>gb|AC093898.3| Homo sapiens BAC clone RP11-724A24 from 4, complete sequence Length = 183273 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 327 aatctatctatctacctatct 347 ||||||||||||||||||||| Sbjct: 28194 aatctatctatctacctatct 28174
>gb|AC093831.3| Homo sapiens BAC clone RP11-401I19 from 4, complete sequence Length = 182116 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctg 348 ||||||||||||||||||||| Sbjct: 27494 atctatctatctacctatctg 27474
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 325 ataatctatctatctacctatctgt 349 |||||||||||||||| |||||||| Sbjct: 21221889 ataatctatctatctatctatctgt 21221865 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 324 gataatctatctatctacctatct 347 ||||||||||||||||| |||||| Sbjct: 27775095 gataatctatctatctatctatct 27775072
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 327 aatctatctatctacctatct 347 ||||||||||||||||||||| Sbjct: 17173024 aatctatctatctacctatct 17173004
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 325 ataatctatctatctacctatctgt 349 |||||||||||||||||| |||||| Sbjct: 7648728 ataatctatctatctacccatctgt 7648704 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 ctccagctagggtttctcgc 79 |||||||||||||||||||| Sbjct: 2543551 ctccagctagggtttctcgc 2543570
>emb|BX950853.16| Zebrafish DNA sequence from clone DKEY-25L21 in linkage group 17, complete sequence Length = 214513 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgtgtc 352 ||||||||||||| ||||||||||| Sbjct: 61371 atctatctatctatctatctgtgtc 61395
>gb|AC026698.6| Homo sapiens chromosome 5 clone CTC-457H17, complete sequence Length = 192731 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 329 tctatctatctacctatctgt 349 ||||||||||||||||||||| Sbjct: 168712 tctatctatctacctatctgt 168732
>gb|AC069362.12| Homo sapiens, clone RP11-745J24, complete sequence Length = 176295 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgtgtc 352 ||||||||||||| ||||||||||| Sbjct: 49074 atctatctatctatctatctgtgtc 49050
>emb|AL596112.3| Human DNA sequence from clone RP11-183D15 on chromosome 6, complete sequence Length = 73908 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 tctatctatctacctatctgt 349 ||||||||||||||||||||| Sbjct: 21631 tctatctatctacctatctgt 21611
>emb|AL513353.7| Human DNA sequence from clone RP11-309N12 on chromosome 9 Contains part of the AUH gene for AU RNA binding protein/enoyl-Coenzyme A hydratase, complete sequence Length = 105225 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 327 aatctatctatctacctatct 347 ||||||||||||||||||||| Sbjct: 50819 aatctatctatctacctatct 50839
>emb|AL359266.14| Human DNA sequence from clone RP11-26P21 on chromosome 13 Contains the 3' end of the DIAPH3 gene for diaphanous homolog 3 (Drosophila), complete sequence Length = 206407 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 315 ccagaaaatgataatctatctatct 339 ||||||||||||| ||||||||||| Sbjct: 192097 ccagaaaatgatagtctatctatct 192121
>emb|AL353621.19| Human DNA sequence from clone RP11-490D19 on chromosome 9 Contains a novel pseudogene, the MRPL50 gene for mitochondrial ribosomal protein L50, the ZNF189 gene for zinc finger protein 189, the ALDOB gene for aldolase B, fructose-bisphosphate, a NADH dehydrogenase (ubiquinone) 1 alpha subcomplex (NDUFA4) pseudogene, three novel genes, the 5' end of the RNF20 gene for ring finger protein 20 and three CpG islands, complete sequence Length = 164115 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 tctatctatctacctatctgt 349 ||||||||||||||||||||| Sbjct: 137407 tctatctatctacctatctgt 137387
>emb|AL158151.16| Human DNA sequence from clone RP11-247A12 on chromosome 9 Contains the CRAT gene for carnitine acetyltransferase (CAT1), the PPP2R4 gene for protein phosphatase 2A, regulatory subunit B' (PR 53) (PTPA), the IER5L gene for immediate early response 5-like, a novel gene and three CpG islands, complete sequence Length = 162445 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctg 348 ||||||||||||||||||||| Sbjct: 96341 atctatctatctacctatctg 96361
>emb|AL161932.15| Human DNA sequence from clone RP11-241I20 on chromosome 10 Contains a ribosomal protein L34 (RPL34) pseudogene, the KIF5B gene for kinesin family member 5B (kinesin 1 (110-120kD)), a ribosomal protein S4 pseudogene, part of a novel pseudogene, a pseudogene similar to part of RAB18 (RAB18, member RAS oncogene family) and a CpG island, complete sequence Length = 143423 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 327 aatctatctatctacctatct 347 ||||||||||||||||||||| Sbjct: 5319 aatctatctatctacctatct 5299
>emb|AL021398.1|HS964D12 Human DNA sequence from clone RP5-964D12 on chromosome 1q24-25 Contains the 5' end of the ASTN gene for astrotactin and the 5' end of the gene for a novel protein (KIAA1747, LOC57795), complete sequence Length = 146963 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgtgtc 352 ||||||||||||| ||||||||||| Sbjct: 10933 atctatctatctatctatctgtgtc 10957
>emb|BX927064.8| Zebrafish DNA sequence from clone DKEY-73N8 in linkage group 24, complete sequence Length = 181758 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgtgtc 352 ||||||||||||| ||||||||||| Sbjct: 47614 atctatctatctatctatctgtgtc 47590
>emb|BX255894.19| Zebrafish DNA sequence from clone CH211-251G8 in linkage group 19, complete sequence Length = 180950 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgtgtc 352 ||||||||||||| ||||||||||| Sbjct: 119884 atctatctatctatctatctgtgtc 119860
>emb|CR450802.8| Zebrafish DNA sequence from clone CH211-197I12 in linkage group 22, complete sequence Length = 186908 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgtgtc 352 ||||||||||||| ||||||||||| Sbjct: 27296 atctatctatctatctatctgtgtc 27272
>gb|AC005406.2| Homo sapiens clone b128f11, complete sequence Length = 226345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 tctatctatctacctatctgt 349 ||||||||||||||||||||| Sbjct: 24095 tctatctatctacctatctgt 24075
>gb|AC011454.6|AC011454 Homo sapiens chromosome 19 clone CTC-347E6, complete sequence Length = 163120 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 265 ggtctgaagaagagtgggaag 285 ||||||||||||||||||||| Sbjct: 71515 ggtctgaagaagagtgggaag 71535
>emb|BX255970.8| Zebrafish DNA sequence from clone CH211-136G2 in linkage group 4, complete sequence Length = 158755 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgtgtc 352 ||||||||||||| ||||||||||| Sbjct: 146846 atctatctatctatctatctgtgtc 146870
>emb|AL732488.7| Zebrafish DNA sequence from clone RP71-1C10 in linkage group 12 Contains part of a novel ring finger gene, a novel zinc finger pseudogene, a novel zinc finger gene and a novel gene similar to valop (vertebrate ancient long opsin), complete sequence Length = 165151 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgtgtc 352 ||||||||||||| ||||||||||| Sbjct: 72987 atctatctatctatctatctgtgtc 72963
>gb|AC159480.5| Mus musculus 6 BAC RP24-470K4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 168310 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 327 aatctatctatctacctatct 347 ||||||||||||||||||||| Sbjct: 113621 aatctatctatctacctatct 113601
>emb|AL596103.22| Mouse DNA sequence from clone RP23-309E16 on chromosome 11 Contains the P4ha2 gene for procollagen-proline 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase) alpha II polypeptide, a novel pseudogene, two novel genes, a diazepam binding inhibitor (Dbi) pseudogene, the Csf2 gene for colony stimulating factor 2 (granulocyte-macrophage), the Il3 gene for interleukin 3 and a CpG island, complete sequence Length = 199500 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 327 aatctatctatctacctatct 347 ||||||||||||||||||||| Sbjct: 25705 aatctatctatctacctatct 25725
>emb|BX255893.5| Zebrafish DNA sequence from clone CH211-272H10 in linkage group 4, complete sequence Length = 99176 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgtgtc 352 ||||||||||||| ||||||||||| Sbjct: 71857 atctatctatctatctatctgtgtc 71833
>gb|AC133939.4| Mus musculus BAC clone RP23-402F1 from chromosome 5, complete sequence Length = 193121 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctg 348 ||||||||||||||||||||| Sbjct: 71547 atctatctatctacctatctg 71567
>gb|AC007291.24|AC007291 Drosophila melanogaster, chromosome 2L, region 30B-, BAC clone BACR02I05, complete sequence Length = 176075 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctg 348 ||||||||||||||||||||| Sbjct: 128344 atctatctatctacctatctg 128364
>gb|AC155840.8| Mus musculus 6 BAC RP24-223C8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 188181 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 327 aatctatctatctacctatct 347 ||||||||||||||||||||| Sbjct: 78131 aatctatctatctacctatct 78151
>gb|AC154554.2| Mus musculus BAC clone RP23-416P6 from chromosome 13, complete sequence Length = 204294 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 317 agaaaatgataatctatctatctacctatctgt 349 |||||| ||| ||||||||||||| |||||||| Sbjct: 125066 agaaaaagatgatctatctatctatctatctgt 125034 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatct 347 |||||||||||||||||||| Sbjct: 36042 atctatctatctacctatct 36061
>emb|BX510320.6| Zebrafish DNA sequence from clone CH211-117C8, complete sequence Length = 170783 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgtgtc 352 ||||||||||||| ||||||||||| Sbjct: 94738 atctatctatctatctatctgtgtc 94714 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 329 tctatctatctacctatctgtgtc 352 |||||||||||| ||||||||||| Sbjct: 94843 tctatctatctatctatctgtgtc 94820
>emb|X90770.1|LEMSREPRG L.esculentum microsatellite repeat DNA region Length = 4532 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 327 aatctatctatctacctatct 347 ||||||||||||||||||||| Sbjct: 2439 aatctatctatctacctatct 2459
>emb|BX537141.17| Zebrafish DNA sequence from clone DKEY-9E8 in linkage group 2, complete sequence Length = 264534 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgtgtc 352 ||||||||||||| ||||||||||| Sbjct: 133674 atctatctatctatctatctgtgtc 133650
>gb|AC084523.1|CBRG20H14 Caenorhabditis briggsae cosmid G20H14, complete sequence Length = 36970 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 301 cccattcgtaatgcccagaaa 321 ||||||||||||||||||||| Sbjct: 25877 cccattcgtaatgcccagaaa 25897
>gb|AC124156.3| Equus caballus clone CH241-280K8, complete sequence Length = 184661 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 tctatctatctacctatctgt 349 ||||||||||||||||||||| Sbjct: 66096 tctatctatctacctatctgt 66076
>dbj|AP004317.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0663E10 Length = 162297 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 327 aatctatctatctacctatct 347 ||||||||||||||||||||| Sbjct: 58941 aatctatctatctacctatct 58961
>dbj|AP004757.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0652D10 Length = 156744 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgtgtc 352 |||||||||||||||||||| |||| Sbjct: 60432 atctatctatctacctatctatgtc 60456
>dbj|AP006057.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1342C04 Length = 172097 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 327 aatctatctatctacctatct 347 ||||||||||||||||||||| Sbjct: 113781 aatctatctatctacctatct 113761
>emb|BX890557.9| Zebrafish DNA sequence from clone DKEYP-8B8, complete sequence Length = 170862 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctg 348 ||||||||||||||||||||| Sbjct: 46478 atctatctatctacctatctg 46498 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctg 348 ||||||||||||||||||||| Sbjct: 46864 atctatctatctacctatctg 46884 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 tctatctatctacctatctg 348 |||||||||||||||||||| Sbjct: 46666 tctatctatctacctatctg 46685 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 tctatctatctacctatctg 348 |||||||||||||||||||| Sbjct: 47056 tctatctatctacctatctg 47075
>emb|BX548163.15| Zebrafish DNA sequence from clone CH211-135J7 in linkage group 10, complete sequence Length = 132400 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgtgtc 352 ||||||||||||| ||||||||||| Sbjct: 79378 atctatctatctatctatctgtgtc 79402
>gb|AC119253.7| Mus musculus chromosome 15, clone RP24-279A15, complete sequence Length = 163503 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 327 aatctatctatctacctatct 347 ||||||||||||||||||||| Sbjct: 92685 aatctatctatctacctatct 92665
>emb|BX890584.6| Mouse DNA sequence from clone RP23-160I11 on chromosome X, complete sequence Length = 120359 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 327 aatctatctatctacctatct 347 ||||||||||||||||||||| Sbjct: 117434 aatctatctatctacctatct 117454
>emb|AJ627213.1| Gallus gallus primary C-C chemokine receptor cluster Length = 210954 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctg 348 ||||||||||||||||||||| Sbjct: 63340 atctatctatctacctatctg 63320
>gb|AC158671.3| Mus musculus 6 BAC RP23-62E15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 218969 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctg 348 ||||||||||||||||||||| Sbjct: 166235 atctatctatctacctatctg 166255
>gb|AC112944.7| Mus musculus chromosome 5, clone RP23-411F8, complete sequence Length = 209174 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatctg 348 ||||||||||||||||||||| Sbjct: 199992 atctatctatctacctatctg 199972
>emb|BX248135.5| Zebrafish DNA sequence from clone CH211-106J4 in linkage group 17, complete sequence Length = 152463 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgtgtc 352 ||||||||||||| ||||||||||| Sbjct: 16928 atctatctatctatctatctgtgtc 16952
>emb|BX530055.9| Mouse DNA sequence from clone RP23-462G16 on chromosome X, complete sequence Length = 168373 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 16 cctttcccctccttccgtccttcct 40 |||||||||||||||| |||||||| Sbjct: 152560 cctttcccctccttccatccttcct 152536
>emb|AL772133.30| Zebrafish DNA sequence from clone CH211-121J5 in linkage group 9, complete sequence Length = 180967 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 328 atctatctatctacctatctgtgtc 352 ||||||||||||| ||||||||||| Sbjct: 48042 atctatctatctatctatctgtgtc 48018
>emb|BX005374.5| Zebrafish DNA sequence from clone DKEY-29H23 in linkage group 15, complete sequence Length = 204318 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 326 taatctatctatctacctatc 346 ||||||||||||||||||||| Sbjct: 201560 taatctatctatctacctatc 201580
>emb|AL732612.28| Mouse DNA sequence from clone RP23-31L20 on chromosome 11, complete sequence Length = 145244 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 326 taatctatctatctacctatc 346 ||||||||||||||||||||| Sbjct: 63661 taatctatctatctacctatc 63641 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatct 347 |||||||||||||||||||| Sbjct: 63399 atctatctatctacctatct 63380 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 atctatctatctacctatct 347 |||||||||||||||||||| Sbjct: 63952 atctatctatctacctatct 63933
>gb|AC152922.5| Mus musculus BAC clone RP24-386D3 from 10, complete sequence Length = 191855 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgtgtc 352 ||||||||||||| ||||||||||| Sbjct: 73666 atctatctatctatctatctgtgtc 73690
>gb|AC125270.7| Mus musculus chromosome 5, clone RP24-150L20, complete sequence Length = 174834 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 327 aatctatctatctacctatct 347 ||||||||||||||||||||| Sbjct: 66065 aatctatctatctacctatct 66085
>gb|AC007257.9|AC007257 Drosophila melanogaster, chromosome 2L, region 30B-, BAC clone BACR24A22, complete sequence Length = 183007 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctg 348 ||||||||||||||||||||| Sbjct: 12197 atctatctatctacctatctg 12217
>emb|AL135747.4|CNS01DVE Human chromosome 14 DNA sequence BAC R-1023I22 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 173275 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 atctatctatctacctatctg 348 ||||||||||||||||||||| Sbjct: 20484 atctatctatctacctatctg 20504
>emb|CR853287.6| Zebrafish DNA sequence from clone DKEYP-115G4 in linkage group 15, complete sequence Length = 169306 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 328 atctatctatctacctatctgtgtc 352 ||||||||||||| ||||||||||| Sbjct: 101828 atctatctatctatctatctgtgtc 101852 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 93,662,422 Number of extensions: 6679625 Number of successful extensions: 991779 Number of sequences better than 10.0: 3083 Number of HSP's gapped: 991774 Number of HSP's successfully gapped: 3569 Length of query: 529 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 507 Effective length of database: 18,508,616,841 Effective search space: 9383868738387 Effective search space used: 9383868738387 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
