ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf147h21 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001059709.1| Oryza sativa (japonica cultivar-group) Os04g0492100 (Os04g0492100) mRNA, partial cds Length = 1838 Score = 957 bits (483), Expect = 0.0 Identities = 1002/1175 (85%) Strand = Plus / Plus Query: 565 gaaatgccaaacgaaagagaacttacgtgtgggatttgcttcgaaagttgtccacgtgag 624 ||||||||||| || |||||| | || ||||| ||||| ||||||| |||||| ||| | Sbjct: 22 gaaatgccaaatgacagagaattgacatgtggaatttgtttcgaaaattgtcctcgtacg 81 Query: 625 tcaatgggtgctgcttcatgtgggcatcctttctgtggtgtatgttggagaggctatatt 684 |||||| |||||||| ||||||| ||||| |||||| ||| |||||||||||| |||||| Sbjct: 82 tcaatgagtgctgctgcatgtggccatccgttctgtagtgcatgttggagaggttatatt 141 Query: 685 ggcacagctataaacgatggtccaggatgtttgatgttgagatgtcctgatccatcctgt 744 |||| ||||||| |||||||||||||| |||||||| |||||||||||||| ||||| Sbjct: 142 agcacttctataaatgatggtccaggatgcttgatgttaagatgtcctgatccgtcctgc 201 Query: 745 tctgctgctgttggacaagatatggttgatttattcgccagtgaggaggataaggggaag 804 | ||||||||||| ||||||||| | ||| | | || ||| ||||||| || ||| Sbjct: 202 acagctgctgttggtcaagatatgatcaattcactggctgatgacgaggatagggaaaag 261 Query: 805 tatgaacgatatctttgcagatcttacattgaagataatagaaaaacaaaatggtgtcct 864 |||| ||||||||| ||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 262 tatgggcgatatcttcgcagatcttacattgaagataataggaagacaaaatggtgtcct 321 Query: 865 gctcctggctgcgaatatgctgtggaatttgtcgttggcagtggcagctatgatgtttct 924 |||||||| || ||||||||||| ||||||||| | |||||||| ||||||||||| Sbjct: 322 gctcctggatgtgaatatgctgtagaatttgtcatgggcagtggtagctatgatgtgaac 381 Query: 925 tgtggctgttcttacgggttctgttggaattgcacggaggaagctcatcgccctgtagat 984 || |||||| ||||| || |||||||| ||||| |||||||||||||| || ||||| Sbjct: 382 tgcaactgttcatacggcttttgttggaactgcactgaggaagctcatcgtccggtagac 441 Query: 985 tgttccacagtttccaaatggattctcaagaatagtgcggaatccgagaatatgaactgg 1044 ||| |||| ||||| || ||||| |||||||| |||||||| || || |||||||||||| Sbjct: 442 tgtgccactgtttcaaagtggatcctcaagaacagtgcggagtctgaaaatatgaactgg 501 Query: 1045 atactagctaattcgaagccttgtcccaagtgcaagcggcctattgaaaagaatcagggc 1104 || ||||||||||| ||||||||||| |||||||||||||| |||||||| || ||||| Sbjct: 502 attctagctaattcaaagccttgtcctaagtgcaagcggcccattgaaaaaaaccaggga 561 Query: 1105 tgcatgcacattacctgcacaccgccatgtaaatttgaattctgctggctttgtcttggt 1164 |||||||||||||| |||||||| ||||| |||||||| || |||||||| ||||||||| Sbjct: 562 tgcatgcacattacatgcacacctccatgcaaatttgagttttgctggctgtgtcttggt 621 Query: 1165 ccatggtcagatcacggggagaggacaggtggtttttatgcttgtaatcgttatgaggca 1224 |||||||| || || || || |||| ||||| |||||||| ||||| |||||||||||| Sbjct: 622 ccatggtcggagcatggagaacggactggtggattttatgcctgtaaccgttatgaggca 681 Query: 1225 gcaaggcaagagggagcgtttgacgattctgaaaggagaagagaaatggcaaagaactcc 1284 |||||||| || ||||||| ||| || |||||||||||||||||||||||||||||||| Sbjct: 682 gcaaggcaggaaggagcgtatgatgaatctgaaaggagaagagaaatggcaaagaactcg 741 Query: 1285 ctcgagagatatacacattactacgagcgatgggcagccaatcagtcatcgaggcaaaag 1344 || |||||||||||||| || || || || ||||||||||||||||| |||||||||||| Sbjct: 742 cttgagagatatacacactattatgaacggtgggcagccaatcagtcgtcgaggcaaaag 801 Query: 1345 gcgcttggggatctgcagagtttgcagaatgataagcttgaaaaactaagtgacatacaa 1404 || | || ||||||| ||||||||| || || ||||||||||| ||||||| |||||| Sbjct: 802 gcattaggagatctgctgagtttgcaaaacgacaagcttgaaaagttaagtgatatacaa 861 Query: 1405 agccaacctgagtcacagcttaagttcataattgaagcatggttacagattgttgaatgt 1464 |||||||| ||||||||||| |||||||| || || || |||||||||||||| |||||| Sbjct: 862 agccaaccagagtcacagctcaagttcatcatagaggcttggttacagattgtcgaatgt 921 Query: 1465 aggcgggtattgaagtggacttacgcatatggttattaccttccagaccatgaacatgcc 1524 ||| ||||||||||||||||||| || ||||||| |||||| ||||| |||||||||||| Sbjct: 922 aggagggtattgaagtggacttatgcttatggtttttacctcccagagcatgaacatgcc 981 Query: 1525 aaaaggcagttcttcgaatacgttcaaggtgaagcagaatctggtttggaacgccttcat 1584 ||||| |||||||| ||||| | |||||||| || ||||| |||||||| || || ||| Sbjct: 982 aaaagacagttctttgaatatctgcaaggtgaggcggaatcaggtttggagcggctgcat 1041 Query: 1585 cagtgtgcggagaaagaacttcagatctatctcgatgcagactgcccatctaaagatttc 1644 || ||||| |||||||||||||| | || || || ||||| | || || ||||||||| Sbjct: 1042 caatgtgcagagaaagaacttcaagtataccttgaagcagaatctccctcaaaagatttc 1101 Query: 1645 aatgacttccgtacaaaattggctggattgaccagcgtaactcgcaattattttgaaaac 1704 ||||||||||||||||| ||||||||||| || || || |||||||||||||| || ||| Sbjct: 1102 aatgacttccgtacaaagttggctggattaactagtgtgactcgcaattatttcgagaac 1161 Query: 1705 ctggtccgtgcattggagtctggattgaatgatgt 1739 || ||||| || |||||| ||||||| |||||||| Sbjct: 1162 cttgtccgggctttggagactggattaaatgatgt 1196
>dbj|AK060196.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-F04, full insert sequence Length = 1838 Score = 957 bits (483), Expect = 0.0 Identities = 1002/1175 (85%) Strand = Plus / Plus Query: 565 gaaatgccaaacgaaagagaacttacgtgtgggatttgcttcgaaagttgtccacgtgag 624 ||||||||||| || |||||| | || ||||| ||||| ||||||| |||||| ||| | Sbjct: 22 gaaatgccaaatgacagagaattgacatgtggaatttgtttcgaaaattgtcctcgtacg 81 Query: 625 tcaatgggtgctgcttcatgtgggcatcctttctgtggtgtatgttggagaggctatatt 684 |||||| |||||||| ||||||| ||||| |||||| ||| |||||||||||| |||||| Sbjct: 82 tcaatgagtgctgctgcatgtggccatccgttctgtagtgcatgttggagaggttatatt 141 Query: 685 ggcacagctataaacgatggtccaggatgtttgatgttgagatgtcctgatccatcctgt 744 |||| ||||||| |||||||||||||| |||||||| |||||||||||||| ||||| Sbjct: 142 agcacttctataaatgatggtccaggatgcttgatgttaagatgtcctgatccgtcctgc 201 Query: 745 tctgctgctgttggacaagatatggttgatttattcgccagtgaggaggataaggggaag 804 | ||||||||||| ||||||||| | ||| | | || ||| ||||||| || ||| Sbjct: 202 acagctgctgttggtcaagatatgatcaattcactggctgatgacgaggatagggaaaag 261 Query: 805 tatgaacgatatctttgcagatcttacattgaagataatagaaaaacaaaatggtgtcct 864 |||| ||||||||| ||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 262 tatgggcgatatcttcgcagatcttacattgaagataataggaagacaaaatggtgtcct 321 Query: 865 gctcctggctgcgaatatgctgtggaatttgtcgttggcagtggcagctatgatgtttct 924 |||||||| || ||||||||||| ||||||||| | |||||||| ||||||||||| Sbjct: 322 gctcctggatgtgaatatgctgtagaatttgtcatgggcagtggtagctatgatgtgaac 381 Query: 925 tgtggctgttcttacgggttctgttggaattgcacggaggaagctcatcgccctgtagat 984 || |||||| ||||| || |||||||| ||||| |||||||||||||| || ||||| Sbjct: 382 tgcaactgttcatacggcttttgttggaactgcactgaggaagctcatcgtccggtagac 441 Query: 985 tgttccacagtttccaaatggattctcaagaatagtgcggaatccgagaatatgaactgg 1044 ||| |||| ||||| || ||||| |||||||| |||||||| || || |||||||||||| Sbjct: 442 tgtgccactgtttcaaagtggatcctcaagaacagtgcggagtctgaaaatatgaactgg 501 Query: 1045 atactagctaattcgaagccttgtcccaagtgcaagcggcctattgaaaagaatcagggc 1104 || ||||||||||| ||||||||||| |||||||||||||| |||||||| || ||||| Sbjct: 502 attctagctaattcaaagccttgtcctaagtgcaagcggcccattgaaaaaaaccaggga 561 Query: 1105 tgcatgcacattacctgcacaccgccatgtaaatttgaattctgctggctttgtcttggt 1164 |||||||||||||| |||||||| ||||| |||||||| || |||||||| ||||||||| Sbjct: 562 tgcatgcacattacatgcacacctccatgcaaatttgagttttgctggctgtgtcttggt 621 Query: 1165 ccatggtcagatcacggggagaggacaggtggtttttatgcttgtaatcgttatgaggca 1224 |||||||| || || || || |||| ||||| |||||||| ||||| |||||||||||| Sbjct: 622 ccatggtcggagcatggagaacggactggtggattttatgcctgtaaccgttatgaggca 681 Query: 1225 gcaaggcaagagggagcgtttgacgattctgaaaggagaagagaaatggcaaagaactcc 1284 |||||||| || ||||||| ||| || |||||||||||||||||||||||||||||||| Sbjct: 682 gcaaggcaggaaggagcgtatgatgaatctgaaaggagaagagaaatggcaaagaactcg 741 Query: 1285 ctcgagagatatacacattactacgagcgatgggcagccaatcagtcatcgaggcaaaag 1344 || |||||||||||||| || || || || ||||||||||||||||| |||||||||||| Sbjct: 742 cttgagagatatacacactattatgaacggtgggcagccaatcagtcgtcgaggcaaaag 801 Query: 1345 gcgcttggggatctgcagagtttgcagaatgataagcttgaaaaactaagtgacatacaa 1404 || | || ||||||| ||||||||| || || ||||||||||| ||||||| |||||| Sbjct: 802 gcattaggagatctgctgagtttgcaaaacgacaagcttgaaaagttaagtgatatacaa 861 Query: 1405 agccaacctgagtcacagcttaagttcataattgaagcatggttacagattgttgaatgt 1464 |||||||| ||||||||||| |||||||| || || || |||||||||||||| |||||| Sbjct: 862 agccaaccagagtcacagctcaagttcatcatagaggcttggttacagattgtcgaatgt 921 Query: 1465 aggcgggtattgaagtggacttacgcatatggttattaccttccagaccatgaacatgcc 1524 ||| ||||||||||||||||||| || ||||||| |||||| ||||| |||||||||||| Sbjct: 922 aggagggtattgaagtggacttatgcttatggtttttacctcccagagcatgaacatgcc 981 Query: 1525 aaaaggcagttcttcgaatacgttcaaggtgaagcagaatctggtttggaacgccttcat 1584 ||||| |||||||| ||||| | |||||||| || ||||| |||||||| || || ||| Sbjct: 982 aaaagacagttctttgaatatctgcaaggtgaggcggaatcaggtttggagcggctgcat 1041 Query: 1585 cagtgtgcggagaaagaacttcagatctatctcgatgcagactgcccatctaaagatttc 1644 || ||||| |||||||||||||| | || || || ||||| | || || ||||||||| Sbjct: 1042 caatgtgcagagaaagaacttcaagtataccttgaagcagaatctccctcaaaagatttc 1101 Query: 1645 aatgacttccgtacaaaattggctggattgaccagcgtaactcgcaattattttgaaaac 1704 ||||||||||||||||| ||||||||||| || || || |||||||||||||| || ||| Sbjct: 1102 aatgacttccgtacaaagttggctggattaactagtgtgactcgcaattatttcgagaac 1161 Query: 1705 ctggtccgtgcattggagtctggattgaatgatgt 1739 || ||||| || |||||| ||||||| |||||||| Sbjct: 1162 cttgtccgggctttggagactggattaaatgatgt 1196
>gb|BT018114.1| Zea mays clone EL01N0553G12.c mRNA sequence Length = 1058 Score = 333 bits (168), Expect = 2e-87 Identities = 363/428 (84%) Strand = Plus / Plus Query: 1312 cgatgggcagccaatcagtcatcgaggcaaaaggcgcttggggatctgcagagtttgcag 1371 |||||||||||||||||||| |||||||||||||| || ||||| || || || | ||| Sbjct: 21 cgatgggcagccaatcagtcgtcgaggcaaaaggcactgggggaccttcaaagcctacag 80 Query: 1372 aatgataagcttgaaaaactaagtgacatacaaagccaacctgagtcacagcttaagttc 1431 ||||| |||||||||| |||||||||||||||| ||||||||||||||||| |||||| Sbjct: 81 aatgacaagcttgaaaggttaagtgacatacaaagtcaacctgagtcacagctgaagttc 140 Query: 1432 ataattgaagcatggttacagattgttgaatgtaggcgggtattgaagtggacttacgca 1491 || | || ||||||||||||||||||||||| || ||||||||||||||||||| || Sbjct: 141 attgtagaggcatggttacagattgttgaatgcagaagggtattgaagtggacttatgcc 200 Query: 1492 tatggttattaccttccagaccatgaacatgccaaaaggcagttcttcgaatacgttcaa 1551 ||||| | |||||| ||||| ||||| ||||||||||| |||||||| ||||| | ||| Sbjct: 201 tatggattttacctgccagagcatgagcatgccaaaagacagttctttgaatatctgcaa 260 Query: 1552 ggtgaagcagaatctggtttggaacgccttcatcagtgtgcggagaaagaacttcagatc 1611 ||||| ||||||||||||||||| || || ||||| ||||| |||||||||||||| || Sbjct: 261 ggtgaggcagaatctggtttggagcggctacatcaatgtgcagagaaagaacttcaaata 320 Query: 1612 tatctcgatgcagactgcccatctaaagatttcaatgacttccgtacaaaattggctgga 1671 || || || ||||| | || || ||||| |||||||| ||||||||||| ||||||||| Sbjct: 321 taccttgacgcagaatctccctcgaaagacttcaatgatttccgtacaaagttggctgga 380 Query: 1672 ttgaccagcgtaactcgcaattattttgaaaacctggtccgtgcattggagtctggattg 1731 || || || || |||||||||||||||||||| || ||||| || |||| ||||||| Sbjct: 381 ttaactagtgtgactcgcaattattttgaaaatctcgtccgggctctggaaactggatta 440 Query: 1732 aatgatgt 1739 |||||||| Sbjct: 441 aatgatgt 448 Score = 58.0 bits (29), Expect = 2e-04 Identities = 62/73 (84%) Strand = Plus / Plus Query: 1859 gctcaacccgtggtatggatgatggcaacatctgggcctgtgatcagtgcacatttgcga 1918 |||||||||| ||| |||||||| | ||||||||| | || ||||||||||||| ||| | Sbjct: 562 gctcaacccgaggtgtggatgatagtaacatctggacatgcgatcagtgcacatatgcaa 621 Query: 1919 accctagatctgc 1931 |||| | |||||| Sbjct: 622 accccaaatctgc 634
>ref|NM_128708.3| Arabidopsis thaliana ubiquitin-protein ligase/ zinc ion binding (AT2G31510) mRNA, complete cds Length = 1993 Score = 202 bits (102), Expect = 4e-48 Identities = 231/274 (84%) Strand = Plus / Plus Query: 949 tggaattgcacggaggaagctcatcgccctgtagattgttccacagtttccaaatggatt 1008 ||||||||||| ||||| ||||| || ||||| |||||| ||||||||| |||||||| Sbjct: 766 tggaattgcactgaggaggctcaccgacctgtggattgtagcacagtttcaaaatggata 825 Query: 1009 ctcaagaatagtgcggaatccgagaatatgaactggatactagctaattcgaagccttgt 1068 | ||||| || || ||||| || |||||||| |||||||| || ||||| ||||||||| Sbjct: 826 ttaaagaacagcgctgaatctgaaaatatgaattggatacttgccaattcaaagccttgt 885 Query: 1069 cccaagtgcaagcggcctattgaaaagaatcagggctgcatgcacattacctgcacaccg 1128 || | || ||| |||| |||||||||||||||||||| |||||||| || || |||||| Sbjct: 886 ccgagatgtaagaggccaattgaaaagaatcagggctgtatgcacatgacatgtacaccg 945 Query: 1129 ccatgtaaatttgaattctgctggctttgtcttggtccatggtcagatcacggggagagg 1188 || ||||||| |||||| || ||||| ||||||||| ||||| ||||||||||| || Sbjct: 946 ccttgtaaatatgaattttgttggctatgtcttggtgcatggatggatcacggggaaaga 1005 Query: 1189 acaggtggtttttatgcttgtaatcgttatgagg 1222 || |||||||||||||||||||| |||||||||| Sbjct: 1006 actggtggtttttatgcttgtaaccgttatgagg 1039 Score = 67.9 bits (34), Expect = 2e-07 Identities = 64/74 (86%) Strand = Plus / Plus Query: 700 gatggtccaggatgtttgatgttgagatgtcctgatccatcctgttctgctgctgttgga 759 ||||| || |||||||||||| | ||||||||||| ||||| ||| |||||||||||| Sbjct: 517 gatggcccgggatgtttgatgctaagatgtcctgacccatcttgtcttgctgctgttggt 576 Query: 760 caagatatggttga 773 || ||||||||||| Sbjct: 577 catgatatggttga 590 Score = 65.9 bits (33), Expect = 6e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 1459 gaatgtaggcgggtattgaagtggacttacgcatatggttattaccttccagaccatgaa 1518 ||||||||||| || ||||| |||||||| |||||||| || ||||| || || |||||| Sbjct: 1276 gaatgtaggcgagtcttgaaatggacttatgcatatggatactacctacctgagcatgaa 1335 Query: 1519 catgccaaaaggcagttcttcgaatacgttcaaggtgaagc 1559 ||||||||| | || || ||||| || | ||||||||||| Sbjct: 1336 catgccaaacgacaatttttcgagtatttgcaaggtgaagc 1376 Score = 58.0 bits (29), Expect = 2e-04 Identities = 47/53 (88%) Strand = Plus / Plus Query: 1630 ccatctaaagatttcaatgacttccgtacaaaattggctggattgaccagcgt 1682 ||||| |||||||||||||| ||||| |||||| | ||||| ||||||||||| Sbjct: 1447 ccatcaaaagatttcaatgatttccggacaaaactagctggtttgaccagcgt 1499 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 499 catgatgagtggtttgttgatgaag 523 |||||||||||||||| |||||||| Sbjct: 313 catgatgagtggtttgctgatgaag 337
>ref|NM_105217.3| Arabidopsis thaliana ubiquitin-protein ligase/ zinc ion binding (AT1G65430) mRNA, complete cds Length = 2048 Score = 194 bits (98), Expect = 1e-45 Identities = 335/414 (80%) Strand = Plus / Plus Query: 822 cagatcttacattgaagataatagaaaaacaaaatggtgtcctgctcctggctgcgaata 881 |||||| ||| ||||||| |||||||| || || |||||||| ||||||||||| || || Sbjct: 689 cagatcatacgttgaagacaatagaaagaccaagtggtgtcccgctcctggctgtgacta 748 Query: 882 tgctgtggaatttgtcgttggcagtggcagctatgatgtttcttgtggctgttcttacgg 941 |||||| | ||||| ||||| ||||| | |||||||| |||| |||| | |||| | Sbjct: 749 tgctgtaaattttgttgttggaagtggtaattatgatgtgaattgtcgctgctgttacag 808 Query: 942 gttctgttggaattgcacggaggaagctcatcgccctgtagattgttccacagtttccaa 1001 ||||| |||||||| | || |||||||| || |||||||||||| ||| ||||| || Sbjct: 809 tttctgctggaattgtgctgaagaagctcaccgtcctgtagattgtgacactgtttctaa 868 Query: 1002 atggattctcaagaatagtgcggaatccgagaatatgaactggatactagctaattcgaa 1061 ||| | | ||||||||||| || || ||||||||||| ||||| | || ||||| || Sbjct: 869 gtgggtattgaagaatagtgctgagtcggagaatatgaattggattttggcaaattccaa 928 Query: 1062 gccttgtcccaagtgcaagcggcctattgaaaagaatcagggctgcatgcacattacctg 1121 ||| ||||| || ||||| ||||| || || || || ||||| || ||||| ||||| || Sbjct: 929 gccctgtccaaaatgcaaacggccaatagagaaaaaccagggttgtatgcatattacgtg 988 Query: 1122 cacaccgccatgtaaatttgaattctgctggctttgtcttggtccatggtcagatcacgg 1181 ||| || |||||||||||||| |||||||||||||| ||||| | ||| |||| || || Sbjct: 989 caccccaccatgtaaatttgagttctgctggctttgccttggggcgtggacagagcatgg 1048 Query: 1182 ggagaggacaggtggtttttatgcttgtaatcgttatgaggcagcaaggcaaga 1235 |||| ||||||||| |||||||||||||| |||||||| ||||||| |||||| Sbjct: 1049 tgagaagacaggtggcttttatgcttgtaaccgttatgaagcagcaaagcaaga 1102 Score = 93.7 bits (47), Expect = 3e-15 Identities = 161/199 (80%) Strand = Plus / Plus Query: 1265 gagaaatggcaaagaactccctcgagagatatacacattactacgagcgatgggcagcca 1324 |||| |||||||||||||| || ||||||||||| || ||||| ||| |||||||| ||| Sbjct: 1132 gagagatggcaaagaactctcttgagagatatacccactactatgagagatgggcaacca 1191 Query: 1325 atcagtcatcgaggcaaaaggcgcttggggatctgcagagtttgcagaatgataagcttg 1384 |||| || || |||||||||||||| |||||| ||| |||| | ||| | ||| Sbjct: 1192 atcaatcgtctaggcaaaaggcgctgctggatcttaagaagatgcaaacagatgatattg 1251 Query: 1385 aaaaactaagtgacatacaaagccaacctgagtcacagcttaagttcataattgaagcat 1444 | || || ||||||||||| | || ||||| ||||| || |||||||| || ||||||| Sbjct: 1252 agaagctcagtgacatacagtgtcagcctgaatcacaactgaagttcattatagaagcat 1311 Query: 1445 ggttacagattgttgaatg 1463 |||||||||| |||||||| Sbjct: 1312 ggttacagatagttgaatg 1330
>gb|DQ086843.1| Arabidopsis thaliana At1g65430 mRNA, complete cds Length = 1704 Score = 194 bits (98), Expect = 1e-45 Identities = 335/414 (80%) Strand = Plus / Plus Query: 822 cagatcttacattgaagataatagaaaaacaaaatggtgtcctgctcctggctgcgaata 881 |||||| ||| ||||||| |||||||| || || |||||||| ||||||||||| || || Sbjct: 612 cagatcatacgttgaagacaatagaaagaccaagtggtgtcccgctcctggctgtgacta 671 Query: 882 tgctgtggaatttgtcgttggcagtggcagctatgatgtttcttgtggctgttcttacgg 941 |||||| | ||||| ||||| ||||| | |||||||| |||| |||| | |||| | Sbjct: 672 tgctgtaaattttgttgttggaagtggtaattatgatgtgaattgtcgctgctgttacag 731 Query: 942 gttctgttggaattgcacggaggaagctcatcgccctgtagattgttccacagtttccaa 1001 ||||| |||||||| | || |||||||| || |||||||||||| ||| ||||| || Sbjct: 732 tttctgctggaattgtgctgaagaagctcaccgtcctgtagattgtgacactgtttctaa 791 Query: 1002 atggattctcaagaatagtgcggaatccgagaatatgaactggatactagctaattcgaa 1061 ||| | | ||||||||||| || || ||||||||||| ||||| | || ||||| || Sbjct: 792 gtgggtattgaagaatagtgctgagtcggagaatatgaattggattttggcaaattccaa 851 Query: 1062 gccttgtcccaagtgcaagcggcctattgaaaagaatcagggctgcatgcacattacctg 1121 ||| ||||| || ||||| ||||| || || || || ||||| || ||||| ||||| || Sbjct: 852 gccctgtccaaaatgcaaacggccaatagagaaaaaccagggttgtatgcatattacgtg 911 Query: 1122 cacaccgccatgtaaatttgaattctgctggctttgtcttggtccatggtcagatcacgg 1181 ||| || |||||||||||||| |||||||||||||| ||||| | ||| |||| || || Sbjct: 912 caccccaccatgtaaatttgagttctgctggctttgccttggggcgtggacagagcatgg 971 Query: 1182 ggagaggacaggtggtttttatgcttgtaatcgttatgaggcagcaaggcaaga 1235 |||| ||||||||| |||||||||||||| |||||||| ||||||| |||||| Sbjct: 972 tgagaagacaggtggcttttatgcttgtaaccgttatgaagcagcaaagcaaga 1025 Score = 93.7 bits (47), Expect = 3e-15 Identities = 161/199 (80%) Strand = Plus / Plus Query: 1265 gagaaatggcaaagaactccctcgagagatatacacattactacgagcgatgggcagcca 1324 |||| |||||||||||||| || ||||||||||| || ||||| ||| |||||||| ||| Sbjct: 1055 gagagatggcaaagaactctcttgagagatatacccactactatgagagatgggcaacca 1114 Query: 1325 atcagtcatcgaggcaaaaggcgcttggggatctgcagagtttgcagaatgataagcttg 1384 |||| || || |||||||||||||| |||||| ||| |||| | ||| | ||| Sbjct: 1115 atcaatcgtctaggcaaaaggcgctgctggatcttaagaagatgcaaacagatgatattg 1174 Query: 1385 aaaaactaagtgacatacaaagccaacctgagtcacagcttaagttcataattgaagcat 1444 | || || ||||||||||| | || ||||| ||||| || |||||||| || ||||||| Sbjct: 1175 agaagctcagtgacatacagtgtcagcctgaatcacaactgaagttcattatagaagcat 1234 Query: 1445 ggttacagattgttgaatg 1463 |||||||||| |||||||| Sbjct: 1235 ggttacagatagttgaatg 1253
>gb|AY128748.1| Arabidopsis thaliana unknown protein (At1g65430) mRNA, complete cds Length = 1841 Score = 194 bits (98), Expect = 1e-45 Identities = 335/414 (80%) Strand = Plus / Plus Query: 822 cagatcttacattgaagataatagaaaaacaaaatggtgtcctgctcctggctgcgaata 881 |||||| ||| ||||||| |||||||| || || |||||||| ||||||||||| || || Sbjct: 612 cagatcatacgttgaagacaatagaaagaccaagtggtgtcccgctcctggctgtgacta 671 Query: 882 tgctgtggaatttgtcgttggcagtggcagctatgatgtttcttgtggctgttcttacgg 941 |||||| | ||||| ||||| ||||| | |||||||| |||| |||| | |||| | Sbjct: 672 tgctgtaaattttgttgttggaagtggtaattatgatgtgaattgtcgctgctgttacag 731 Query: 942 gttctgttggaattgcacggaggaagctcatcgccctgtagattgttccacagtttccaa 1001 ||||| |||||||| | || |||||||| || |||||||||||| ||| ||||| || Sbjct: 732 tttctgctggaattgtgctgaagaagctcaccgtcctgtagattgtgacactgtttctaa 791 Query: 1002 atggattctcaagaatagtgcggaatccgagaatatgaactggatactagctaattcgaa 1061 ||| | | ||||||||||| || || ||||||||||| ||||| | || ||||| || Sbjct: 792 gtgggtattgaagaatagtgctgagtcggagaatatgaattggattttggcaaattccaa 851 Query: 1062 gccttgtcccaagtgcaagcggcctattgaaaagaatcagggctgcatgcacattacctg 1121 ||| ||||| || ||||| ||||| || || || || ||||| || ||||| ||||| || Sbjct: 852 gccctgtccaaaatgcaaacggccaatagagaaaaaccagggttgtatgcatattacgtg 911 Query: 1122 cacaccgccatgtaaatttgaattctgctggctttgtcttggtccatggtcagatcacgg 1181 ||| || |||||||||||||| |||||||||||||| ||||| | ||| |||| || || Sbjct: 912 caccccaccatgtaaatttgagttctgctggctttgccttggggcgtggacagagcatgg 971 Query: 1182 ggagaggacaggtggtttttatgcttgtaatcgttatgaggcagcaaggcaaga 1235 |||| ||||||||| |||||||||||||| |||||||| ||||||| |||||| Sbjct: 972 tgagaagacaggtggcttttatgcttgtaaccgttatgaagcagcaaagcaaga 1025 Score = 93.7 bits (47), Expect = 3e-15 Identities = 161/199 (80%) Strand = Plus / Plus Query: 1265 gagaaatggcaaagaactccctcgagagatatacacattactacgagcgatgggcagcca 1324 |||| |||||||||||||| || ||||||||||| || ||||| ||| |||||||| ||| Sbjct: 1055 gagagatggcaaagaactctcttgagagatatacccactactatgagagatgggcaacca 1114 Query: 1325 atcagtcatcgaggcaaaaggcgcttggggatctgcagagtttgcagaatgataagcttg 1384 |||| || || |||||||||||||| |||||| ||| |||| | ||| | ||| Sbjct: 1115 atcaatcgtctaggcaaaaggcgctgctggatcttaagaagatgcaaacagatgatattg 1174 Query: 1385 aaaaactaagtgacatacaaagccaacctgagtcacagcttaagttcataattgaagcat 1444 | || || ||||||||||| | || ||||| ||||| || |||||||| || ||||||| Sbjct: 1175 agaagctcagtgacatacagtgtcagcctgaatcacaactgaagttcattatagaagcat 1234 Query: 1445 ggttacagattgttgaatg 1463 |||||||||| |||||||| Sbjct: 1235 ggttacagatagttgaatg 1253
>gb|AY062808.1| Arabidopsis thaliana Unknown protein (At1g65430; T8F5.21) mRNA, complete cds Length = 2013 Score = 194 bits (98), Expect = 1e-45 Identities = 335/414 (80%) Strand = Plus / Plus Query: 822 cagatcttacattgaagataatagaaaaacaaaatggtgtcctgctcctggctgcgaata 881 |||||| ||| ||||||| |||||||| || || |||||||| ||||||||||| || || Sbjct: 688 cagatcatacgttgaagacaatagaaagaccaagtggtgtcccgctcctggctgtgacta 747 Query: 882 tgctgtggaatttgtcgttggcagtggcagctatgatgtttcttgtggctgttcttacgg 941 |||||| | ||||| ||||| ||||| | |||||||| |||| |||| | |||| | Sbjct: 748 tgctgtaaattttgttgttggaagtggtaattatgatgtgaattgtcgctgctgttacag 807 Query: 942 gttctgttggaattgcacggaggaagctcatcgccctgtagattgttccacagtttccaa 1001 ||||| |||||||| | || |||||||| || |||||||||||| ||| ||||| || Sbjct: 808 tttctgctggaattgtgctgaagaagctcaccgtcctgtagattgtgacactgtttctaa 867 Query: 1002 atggattctcaagaatagtgcggaatccgagaatatgaactggatactagctaattcgaa 1061 ||| | | ||||||||||| || || ||||||||||| ||||| | || ||||| || Sbjct: 868 gtgggtattgaagaatagtgctgagtcggagaatatgaattggattttggcaaattccaa 927 Query: 1062 gccttgtcccaagtgcaagcggcctattgaaaagaatcagggctgcatgcacattacctg 1121 ||| ||||| || ||||| ||||| || || || || ||||| || ||||| ||||| || Sbjct: 928 gccctgtccaaaatgcaaacggccaatagagaaaaaccagggttgtatgcatattacgtg 987 Query: 1122 cacaccgccatgtaaatttgaattctgctggctttgtcttggtccatggtcagatcacgg 1181 ||| || |||||||||||||| |||||||||||||| ||||| | ||| |||| || || Sbjct: 988 caccccaccatgtaaatttgagttctgctggctttgccttggggcgtggacagagcatgg 1047 Query: 1182 ggagaggacaggtggtttttatgcttgtaatcgttatgaggcagcaaggcaaga 1235 |||| ||||||||| |||||||||||||| |||||||| ||||||| |||||| Sbjct: 1048 tgagaagacaggtggcttttatgcttgtaaccgttatgaagcagcaaagcaaga 1101 Score = 93.7 bits (47), Expect = 3e-15 Identities = 161/199 (80%) Strand = Plus / Plus Query: 1265 gagaaatggcaaagaactccctcgagagatatacacattactacgagcgatgggcagcca 1324 |||| |||||||||||||| || ||||||||||| || ||||| ||| |||||||| ||| Sbjct: 1131 gagagatggcaaagaactctcttgagagatatacccactactatgagagatgggcaacca 1190 Query: 1325 atcagtcatcgaggcaaaaggcgcttggggatctgcagagtttgcagaatgataagcttg 1384 |||| || || |||||||||||||| |||||| ||| |||| | ||| | ||| Sbjct: 1191 atcaatcgtctaggcaaaaggcgctgctggatcttaagaagatgcaaacagatgatattg 1250 Query: 1385 aaaaactaagtgacatacaaagccaacctgagtcacagcttaagttcataattgaagcat 1444 | || || ||||||||||| | || ||||| ||||| || |||||||| || ||||||| Sbjct: 1251 agaagctcagtgacatacagtgtcagcctgaatcacaactgaagttcattatagaagcat 1310 Query: 1445 ggttacagattgttgaatg 1463 |||||||||| |||||||| Sbjct: 1311 ggttacagatagttgaatg 1329
>ref|NM_100470.3| Arabidopsis thaliana ubiquitin-protein ligase/ zinc ion binding (AT1G05890) mRNA, complete cds Length = 2289 Score = 172 bits (87), Expect = 4e-39 Identities = 333/415 (80%) Strand = Plus / Plus Query: 949 tggaattgcacggaggaagctcatcgccctgtagattgttccacagtttccaaatggatt 1008 ||||||||||| || || ||||| || ||||| |||||| ||||||| |||||||| Sbjct: 1025 tggaattgcactgaagaggctcaccgtcctgtggattgtgacacagttggaaaatggata 1084 Query: 1009 ctcaagaatagtgcggaatccgagaatatgaactggatactagctaattcgaagccttgt 1068 || ||||| || || ||||| || |||||||| |||||||| || ||||| ||||||||| Sbjct: 1085 ctaaagaacagcgctgaatctgaaaatatgaattggatacttgccaattcaaagccttgt 1144 Query: 1069 cccaagtgcaagcggcctattgaaaagaatcagggctgcatgcacattacctgcacaccg 1128 || ||||| |||||||| |||||||||||||| ||||| |||||||| || |||||||| Sbjct: 1145 ccaaagtgtaagcggccaattgaaaagaatcatggctgtatgcacatgacatgcacacca 1204 Query: 1129 ccatgtaaatttgaattctgctggctttgtcttggtccatggtcagatcacggggagagg 1188 || ||||||||||| || || |||||||| ||| ||||| |||| |||||||| || Sbjct: 1205 ccttgtaaatttgagttttgttggctttgccttaacgcatggacagaacacggggaaaga 1264 Query: 1189 acaggtggtttttatgcttgtaatcgttatgaggcagcaaggcaagagggagcgtttgac 1248 || ||||| |||||||| || || || |||||||| || | |||||| || || ||| Sbjct: 1265 actggtggattttatgcctgcaaccggtatgaggcggctaagcaagaagggttgtatgat 1324 Query: 1249 gattctgaaaggagaagagaaatggcaaagaactccctcgagagatatacacattactac 1308 || |||||||||| |||| |||||||| || || || |||||||| || |||||||| Sbjct: 1325 gaggctgaaaggaggcgagagatggcaaaaaattcgctagagagatacactcattactat 1384 Query: 1309 gagcgatgggcagccaatcagtcatcgaggcaaaaggcgcttggggatctgcaga 1363 || || |||||| |||||| ||||||||||| || | ||||||||||||| Sbjct: 1385 gaacgctgggcaagcaatcaagtgtcgaggcaaaaagctatgggggatctgcaga 1439 Score = 44.1 bits (22), Expect = 2.3 Identities = 100/126 (79%) Strand = Plus / Plus Query: 643 tgtgggcatcctttctgtggtgtatgttggagaggctatattggcacagctataaacgat 702 ||||| ||||||||||| | | |||||||| ||| ||||| ||||| | || || ||| Sbjct: 719 tgtggtcatcctttctgcgctacatgttggacaggttatataagcacaaccatcaatgat 778 Query: 703 ggtccaggatgtttgatgttgagatgtcctgatccatcctgttctgctgctgttggacaa 762 || ||||| ||||||||| | | |||||| || || || ||| |||||||| |||| | | Sbjct: 779 ggcccaggctgtttgatgctaaaatgtcccgacccttcttgtcctgctgctattggtcga 838 Query: 763 gatatg 768 |||||| Sbjct: 839 gatatg 844
>gb|BT000064.1| Arabidopsis thaliana unknown protein (At1g05890) mRNA, complete cds Length = 1762 Score = 172 bits (87), Expect = 4e-39 Identities = 333/415 (80%) Strand = Plus / Plus Query: 949 tggaattgcacggaggaagctcatcgccctgtagattgttccacagtttccaaatggatt 1008 ||||||||||| || || ||||| || ||||| |||||| ||||||| |||||||| Sbjct: 751 tggaattgcactgaagaggctcaccgtcctgtggattgtgacacagttggaaaatggata 810 Query: 1009 ctcaagaatagtgcggaatccgagaatatgaactggatactagctaattcgaagccttgt 1068 || ||||| || || ||||| || |||||||| |||||||| || ||||| ||||||||| Sbjct: 811 ctaaagaacagcgctgaatctgaaaatatgaattggatacttgccaattcaaagccttgt 870 Query: 1069 cccaagtgcaagcggcctattgaaaagaatcagggctgcatgcacattacctgcacaccg 1128 || ||||| |||||||| |||||||||||||| ||||| |||||||| || |||||||| Sbjct: 871 ccaaagtgtaagcggccaattgaaaagaatcatggctgtatgcacatgacatgcacacca 930 Query: 1129 ccatgtaaatttgaattctgctggctttgtcttggtccatggtcagatcacggggagagg 1188 || ||||||||||| || || |||||||| ||| ||||| |||| |||||||| || Sbjct: 931 ccttgtaaatttgagttttgttggctttgccttaacgcatggacagaacacggggaaaga 990 Query: 1189 acaggtggtttttatgcttgtaatcgttatgaggcagcaaggcaagagggagcgtttgac 1248 || ||||| |||||||| || || || |||||||| || | |||||| || || ||| Sbjct: 991 actggtggattttatgcctgcaaccggtatgaggcggctaagcaagaagggttgtatgat 1050 Query: 1249 gattctgaaaggagaagagaaatggcaaagaactccctcgagagatatacacattactac 1308 || |||||||||| |||| |||||||| || || || |||||||| || |||||||| Sbjct: 1051 gaggctgaaaggaggcgagagatggcaaaaaattcgctagagagatacactcattactat 1110 Query: 1309 gagcgatgggcagccaatcagtcatcgaggcaaaaggcgcttggggatctgcaga 1363 || || |||||| |||||| ||||||||||| || | ||||||||||||| Sbjct: 1111 gaacgctgggcaagcaatcaagtgtcgaggcaaaaagctatgggggatctgcaga 1165 Score = 44.1 bits (22), Expect = 2.3 Identities = 100/126 (79%) Strand = Plus / Plus Query: 643 tgtgggcatcctttctgtggtgtatgttggagaggctatattggcacagctataaacgat 702 ||||| ||||||||||| | | |||||||| ||| ||||| ||||| | || || ||| Sbjct: 445 tgtggtcatcctttctgcgctacatgttggacaggttatataagcacaaccatcaatgat 504 Query: 703 ggtccaggatgtttgatgttgagatgtcctgatccatcctgttctgctgctgttggacaa 762 || ||||| ||||||||| | | |||||| || || || ||| |||||||| |||| | | Sbjct: 505 ggcccaggctgtttgatgctaaaatgtcccgacccttcttgtcctgctgctattggtcga 564 Query: 763 gatatg 768 |||||| Sbjct: 565 gatatg 570
>gb|AY120783.1| Arabidopsis thaliana unknown protein (At1g05890) mRNA, complete cds Length = 2240 Score = 172 bits (87), Expect = 4e-39 Identities = 333/415 (80%) Strand = Plus / Plus Query: 949 tggaattgcacggaggaagctcatcgccctgtagattgttccacagtttccaaatggatt 1008 ||||||||||| || || ||||| || ||||| |||||| ||||||| |||||||| Sbjct: 1024 tggaattgcactgaagaggctcaccgtcctgtggattgtgacacagttggaaaatggata 1083 Query: 1009 ctcaagaatagtgcggaatccgagaatatgaactggatactagctaattcgaagccttgt 1068 || ||||| || || ||||| || |||||||| |||||||| || ||||| ||||||||| Sbjct: 1084 ctaaagaacagcgctgaatctgaaaatatgaattggatacttgccaattcaaagccttgt 1143 Query: 1069 cccaagtgcaagcggcctattgaaaagaatcagggctgcatgcacattacctgcacaccg 1128 || ||||| |||||||| |||||||||||||| ||||| |||||||| || |||||||| Sbjct: 1144 ccaaagtgtaagcggccaattgaaaagaatcatggctgtatgcacatgacatgcacacca 1203 Query: 1129 ccatgtaaatttgaattctgctggctttgtcttggtccatggtcagatcacggggagagg 1188 || ||||||||||| || || |||||||| ||| ||||| |||| |||||||| || Sbjct: 1204 ccttgtaaatttgagttttgttggctttgccttaacgcatggacagaacacggggaaaga 1263 Query: 1189 acaggtggtttttatgcttgtaatcgttatgaggcagcaaggcaagagggagcgtttgac 1248 || ||||| |||||||| || || || |||||||| || | |||||| || || ||| Sbjct: 1264 actggtggattttatgcctgcaaccggtatgaggcggctaagcaagaagggttgtatgat 1323 Query: 1249 gattctgaaaggagaagagaaatggcaaagaactccctcgagagatatacacattactac 1308 || |||||||||| |||| |||||||| || || || |||||||| || |||||||| Sbjct: 1324 gaggctgaaaggaggcgagagatggcaaaaaattcgctagagagatacactcattactat 1383 Query: 1309 gagcgatgggcagccaatcagtcatcgaggcaaaaggcgcttggggatctgcaga 1363 || || |||||| |||||| ||||||||||| || | ||||||||||||| Sbjct: 1384 gaacgctgggcaagcaatcaagtgtcgaggcaaaaagctatgggggatctgcaga 1438 Score = 44.1 bits (22), Expect = 2.3 Identities = 100/126 (79%) Strand = Plus / Plus Query: 643 tgtgggcatcctttctgtggtgtatgttggagaggctatattggcacagctataaacgat 702 ||||| ||||||||||| | | |||||||| ||| ||||| ||||| | || || ||| Sbjct: 718 tgtggtcatcctttctgcgctacatgttggacaggttatataagcacaaccatcaatgat 777 Query: 703 ggtccaggatgtttgatgttgagatgtcctgatccatcctgttctgctgctgttggacaa 762 || ||||| ||||||||| | | |||||| || || || ||| |||||||| |||| | | Sbjct: 778 ggcccaggctgtttgatgctaaaatgtcccgacccttcttgtcctgctgctattggtcga 837 Query: 763 gatatg 768 |||||| Sbjct: 838 gatatg 843
>emb|BX815378.1|CNS0ADYF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS56ZB07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2201 Score = 172 bits (87), Expect = 4e-39 Identities = 333/415 (80%) Strand = Plus / Plus Query: 949 tggaattgcacggaggaagctcatcgccctgtagattgttccacagtttccaaatggatt 1008 ||||||||||| || || ||||| || ||||| |||||| ||||||| |||||||| Sbjct: 1027 tggaattgcactgaagaggctcaccgtcctgtggattgtgacacagttggaaaatggata 1086 Query: 1009 ctcaagaatagtgcggaatccgagaatatgaactggatactagctaattcgaagccttgt 1068 || ||||| || || ||||| || |||||||| |||||||| || ||||| ||||||||| Sbjct: 1087 ctaaagaacagcgctgaatctgaaaatatgaattggatacttgccaattcaaagccttgt 1146 Query: 1069 cccaagtgcaagcggcctattgaaaagaatcagggctgcatgcacattacctgcacaccg 1128 || ||||| |||||||| |||||||||||||| ||||| |||||||| || |||||||| Sbjct: 1147 ccaaagtgtaagcggccaattgaaaagaatcatggctgtatgcacatgacatgcacacca 1206 Query: 1129 ccatgtaaatttgaattctgctggctttgtcttggtccatggtcagatcacggggagagg 1188 || ||||||||||| || || |||||||| ||| ||||| |||| |||||||| || Sbjct: 1207 ccttgtaaatttgagttttgttggctttgccttaacgcatggacagaacacggggaaaga 1266 Query: 1189 acaggtggtttttatgcttgtaatcgttatgaggcagcaaggcaagagggagcgtttgac 1248 || ||||| |||||||| || || || |||||||| || | |||||| || || ||| Sbjct: 1267 actggtggattttatgcctgcaaccggtatgaggcggctaagcaagaagggttgtatgat 1326 Query: 1249 gattctgaaaggagaagagaaatggcaaagaactccctcgagagatatacacattactac 1308 || |||||||||| |||| |||||||| || || || |||||||| || |||||||| Sbjct: 1327 gaggctgaaaggaggcgagagatggcaaaaaattcgctagagagatacactcattactat 1386 Query: 1309 gagcgatgggcagccaatcagtcatcgaggcaaaaggcgcttggggatctgcaga 1363 || || |||||| |||||| ||||||||||| || | ||||||||||||| Sbjct: 1387 gaacgctgggcaagcaatcaagtgtcgaggcaaaaagctatgggggatctgcaga 1441 Score = 44.1 bits (22), Expect = 2.3 Identities = 100/126 (79%) Strand = Plus / Plus Query: 643 tgtgggcatcctttctgtggtgtatgttggagaggctatattggcacagctataaacgat 702 ||||| ||||||||||| | | |||||||| ||| ||||| ||||| | || || ||| Sbjct: 721 tgtggtcatcctttctgcgctacatgttggacaggttatataagcacaaccatcaatgat 780 Query: 703 ggtccaggatgtttgatgttgagatgtcctgatccatcctgttctgctgctgttggacaa 762 || ||||| ||||||||| | | |||||| || || || ||| |||||||| |||| | | Sbjct: 781 ggcccaggctgtttgatgctaaaatgtcccgacccttcttgtcctgctgctattggtcga 840 Query: 763 gatatg 768 |||||| Sbjct: 841 gatatg 846
>emb|Y09105.1|NPY09105 N.plumbaginifolia mRNA for unknown protein (clone Np22c28) Length = 1346 Score = 147 bits (74), Expect = 2e-31 Identities = 278/346 (80%) Strand = Plus / Plus Query: 998 ccaaatggattctcaagaatagtgcggaatccgagaatatgaactggatactagctaatt 1057 ||||||||||| | || || ||||| || || || || ||||| ||||| | ||||||| Sbjct: 131 ccaaatggattttgaaaaacagtgccgagtcagaaaacatgaattggatcttggctaatt 190 Query: 1058 cgaagccttgtcccaagtgcaagcggcctattgaaaagaatcagggctgcatgcacatta 1117 | ||||| ||||| |||||||||||||| ||||| ||||| || || || |||||||| | Sbjct: 191 ccaagccctgtccgaagtgcaagcggccaattgagaagaaccaagggtgtatgcacatga 250 Query: 1118 cctgcacaccgccatgtaaatttgaattctgctggctttgtcttggtccatggtcagatc 1177 | || || || |||||||||||||| || |||||| | ||||||||| | |||||||| | Sbjct: 251 cttgtacgccaccatgtaaatttgagttttgctggttatgtcttggtgcgtggtcagacc 310 Query: 1178 acggggagaggacaggtggtttttatgcttgtaatcgttatgaggcagcaaggcaagagg 1237 | || || ||||| ||||| |||||||| |||||||| ||||| |||||| ||||||| Sbjct: 311 atggtgaaaggactggtggattttatgcatgtaatcgctatgaatcagcaaaacaagagg 370 Query: 1238 gagcgtttgacgattctgaaaggagaagagaaatggcaaagaactccctcgagagatata 1297 | | || ||| || | || || || ||||| ||||| || ||||| || |||||||| | Sbjct: 371 gtgtgtatgatgaagccgagagaaggagagagatggccaaaaactctctggagagataca 430 Query: 1298 cacattactacgagcgatgggcagccaatcagtcatcgaggcaaaa 1343 | ||||||||||| || |||||| |||| || || ||||||||||| Sbjct: 431 cgcattactacgaacgctgggcaaccaaccaatcgtcgaggcaaaa 476 Score = 95.6 bits (48), Expect = 7e-16 Identities = 171/212 (80%) Strand = Plus / Plus Query: 1381 cttgaaaaactaagtgacatacaaagccaacctgagtcacagcttaagttcataattgaa 1440 |||||||| || ||||| ||||| ||||||| ||||||||| | |||||||| | ||| Sbjct: 514 cttgaaaagcttagtgaaatacagtgccaacccgagtcacagttgaagttcattttagaa 573 Query: 1441 gcatggttacagattgttgaatgtaggcgggtattgaagtggacttacgcatatggttat 1500 | ||| |||||| |||||||||||| | || || || |||||||| |||||||| || Sbjct: 574 tcctggcaacagatagttgaatgtaggagagtgttaaaatggacttatgcatatggatac 633 Query: 1501 taccttccagaccatgaacatgccaaaaggcagttcttcgaatacgttcaaggtgaagca 1560 ||||| || || ||||| ||||| ||||||||||| || || ||| | |||||||| ||| Sbjct: 634 tacctacccgaacatgagcatgcaaaaaggcagttttttgagtacttacaaggtgaggca 693 Query: 1561 gaatctggtttggaacgccttcatcagtgtgc 1592 ||| ||||||| || | |||||||| ||||| Sbjct: 694 gaagctggtttagagaggcttcatcaatgtgc 725
>emb|CR855211.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0425E08, complete sequence Length = 118435 Score = 123 bits (62), Expect = 3e-24 Identities = 98/110 (89%) Strand = Plus / Plus Query: 1043 ggatactagctaattcgaagccttgtcccaagtgcaagcggcctattgaaaagaatcagg 1102 |||| ||||||||||| ||||||||||| |||||||||||||| |||||||| || |||| Sbjct: 21851 ggattctagctaattcaaagccttgtcctaagtgcaagcggcccattgaaaaaaaccagg 21910 Query: 1103 gctgcatgcacattacctgcacaccgccatgtaaatttgaattctgctgg 1152 | |||||||||||||| |||||||| ||||| |||||||| || |||||| Sbjct: 21911 gatgcatgcacattacatgcacacctccatgcaaatttgagttttgctgg 21960 Score = 117 bits (59), Expect = 2e-22 Identities = 140/167 (83%) Strand = Plus / Plus Query: 679 tatattggcacagctataaacgatggtccaggatgtttgatgttgagatgtcctgatcca 738 |||||| |||| ||||||| |||||||||||||| |||||||| |||||||||||||| Sbjct: 20796 tatattagcacttctataaatgatggtccaggatgcttgatgttaagatgtcctgatccg 20855 Query: 739 tcctgttctgctgctgttggacaagatatggttgatttattcgccagtgaggaggataag 798 ||||| | ||||||||||| ||||||||| | ||| | | || ||| ||||||| | Sbjct: 20856 tcctgcacagctgctgttggtcaagatatgatcaattcactggctgatgacgaggatagg 20915 Query: 799 gggaagtatgaacgatatctttgcagatcttacattgaagataatag 845 | ||||||| ||||||||| ||||||||||||||||||||||||| Sbjct: 20916 gaaaagtatgggcgatatcttcgcagatcttacattgaagataatag 20962 Score = 117 bits (59), Expect = 2e-22 Identities = 86/95 (90%) Strand = Plus / Plus Query: 1450 cagattgttgaatgtaggcgggtattgaagtggacttacgcatatggttattaccttcca 1509 |||||||| ||||||||| ||||||||||||||||||| || ||||||| |||||| ||| Sbjct: 22810 cagattgtcgaatgtaggagggtattgaagtggacttatgcttatggtttttacctccca 22869 Query: 1510 gaccatgaacatgccaaaaggcagttcttcgaata 1544 || ||||||||||||||||| |||||||| ||||| Sbjct: 22870 gagcatgaacatgccaaaagacagttctttgaata 22904 Score = 107 bits (54), Expect = 2e-19 Identities = 87/98 (88%) Strand = Plus / Plus Query: 226 gactccgccgacgaggacttctacagcggcggcgaggcgggcctcgccctcagcgacgac 285 |||||||||||||| ||||||||||||||||| ||||| || |||| | ||||||||| Sbjct: 17068 gactccgccgacgacgacttctacagcggcggggaggccgggctcggcgggagcgacgac 17127 Query: 286 ggggacgcggactacgacttcgcggaccgcgactccga 323 |||||||| |||||||||||||| |||| ||||||||| Sbjct: 17128 ggggacgccgactacgacttcgccgaccacgactccga 17165 Score = 103 bits (52), Expect = 3e-18 Identities = 73/80 (91%) Strand = Plus / Plus Query: 1252 tctgaaaggagaagagaaatggcaaagaactccctcgagagatatacacattactacgag 1311 |||||||||||||||||||||||||||||||| || |||||||||||||| || || || Sbjct: 22235 tctgaaaggagaagagaaatggcaaagaactcgcttgagagatatacacactattatgaa 22294 Query: 1312 cgatgggcagccaatcagtc 1331 || ||||||||||||||||| Sbjct: 22295 cggtgggcagccaatcagtc 22314 Score = 93.7 bits (47), Expect = 3e-15 Identities = 65/71 (91%) Strand = Plus / Plus Query: 850 acaaaatggtgtcctgctcctggctgcgaatatgctgtggaatttgtcgttggcagtggc 909 ||||||||||||||||||||||| || ||||||||||| ||||||||| | |||||||| Sbjct: 21302 acaaaatggtgtcctgctcctggatgtgaatatgctgtagaatttgtcatgggcagtggt 21361 Query: 910 agctatgatgt 920 ||||||||||| Sbjct: 21362 agctatgatgt 21372 Score = 85.7 bits (43), Expect = 7e-13 Identities = 103/123 (83%) Strand = Plus / Plus Query: 1551 aggtgaagcagaatctggtttggaacgccttcatcagtgtgcggagaaagaacttcagat 1610 |||||| || ||||| |||||||| || || ||||| ||||| |||||||||||||| | Sbjct: 22994 aggtgaggcggaatcaggtttggagcggctgcatcaatgtgcagagaaagaacttcaagt 23053 Query: 1611 ctatctcgatgcagactgcccatctaaagatttcaatgacttccgtacaaaattggctgg 1670 || || || ||||| | || || |||||||||||||||||||||||||| |||||||| Sbjct: 23054 ataccttgaagcagaatctccctcaaaagatttcaatgacttccgtacaaagttggctgg 23113 Query: 1671 att 1673 ||| Sbjct: 23114 att 23116 Score = 83.8 bits (42), Expect = 3e-12 Identities = 69/78 (88%) Strand = Plus / Plus Query: 406 gatgacatgaatcgggtttcaactgttctttcaatttcaaaatcagaagcatgcgccctt 465 ||||| || ||| |||||||||||||||||||||||||||| ||||||||||| | ||| Sbjct: 19517 gatgatataaatagggtttcaactgttctttcaatttcaaagtcagaagcatgtgttctt 19576 Query: 466 cttcgcagttataactgg 483 ||||| | |||||||||| Sbjct: 19577 cttcgtaattataactgg 19594 Score = 79.8 bits (40), Expect = 4e-11 Identities = 79/92 (85%) Strand = Plus / Plus Query: 1151 ggctttgtcttggtccatggtcagatcacggggagaggacaggtggtttttatgcttgta 1210 |||| ||||||||||||||||| || || || || |||| ||||| |||||||| |||| Sbjct: 22045 ggctgtgtcttggtccatggtcggagcatggagaacggactggtggattttatgcctgta 22104 Query: 1211 atcgttatgaggcagcaaggcaagagggagcg 1242 | |||||||||||||||||||| || |||||| Sbjct: 22105 accgttatgaggcagcaaggcaggaaggagcg 22136 Score = 75.8 bits (38), Expect = 6e-10 Identities = 74/86 (86%) Strand = Plus / Plus Query: 592 tgtgggatttgcttcgaaagttgtccacgtgagtcaatgggtgctgcttcatgtgggcat 651 ||||| ||||| ||||||| |||||| ||| ||||||| |||||||| ||||||| ||| Sbjct: 20619 tgtggaatttgtttcgaaaattgtcctcgtacgtcaatgagtgctgctgcatgtggccat 20678 Query: 652 cctttctgtggtgtatgttggagagg 677 || |||||| ||| |||||||||||| Sbjct: 20679 ccgttctgtagtgcatgttggagagg 20704 Score = 75.8 bits (38), Expect = 6e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 1379 agcttgaaaaactaagtgacatacaaagccaacctgagtcacagcttaagttcataattg 1438 |||||||||| ||||||| |||||||||||||| ||||||||||| |||||||| || | Sbjct: 22658 agcttgaaaagttaagtgatatacaaagccaaccagagtcacagctcaagttcatcatag 22717 Query: 1439 aagcatggttacag 1452 | || ||||||||| Sbjct: 22718 aggcttggttacag 22731 Score = 67.9 bits (34), Expect = 2e-07 Identities = 76/90 (84%) Strand = Plus / Plus Query: 955 tgcacggaggaagctcatcgccctgtagattgttccacagtttccaaatggattctcaag 1014 ||||| |||||||||||||| || || || ||| |||| ||||| || ||||| |||||| Sbjct: 21479 tgcactgaggaagctcatcgtccggtcgactgtgccactgtttcaaagtggatcctcaag 21538 Query: 1015 aatagtgcggaatccgagaatatgaactgg 1044 || |||||||| || || |||||||||||| Sbjct: 21539 aacagtgcggagtctgaaaatatgaactgg 21568 Score = 63.9 bits (32), Expect = 2e-06 Identities = 80/96 (83%) Strand = Plus / Plus Query: 490 agtaaggtgcatgatgagtggtttgttgatgaagcacgagttcgtactgctgttggttta 549 ||||||||||||||||| ||||||| |||||||| || ||||||| | ||||||||| Sbjct: 20184 agtaaggtgcatgatgaatggtttgctgatgaagaacatgttcgtaaggttgttggtttt 20243 Query: 550 ccggagaagcaaaatgaaatgccaaacgaaagagaa 585 ||||| |||| | ||||||||||| || |||||| Sbjct: 20244 ccggaaaagctcatcgaaatgccaaatgacagagaa 20279 Score = 56.0 bits (28), Expect = 6e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 1684 actcgcaattattttgaaaacctggtccgtgcattggagtctggattgaatgatgt 1739 |||||||||||||| || ||||| ||||| || |||||| ||||||| |||||||| Sbjct: 23308 actcgcaattatttcgagaaccttgtccgggctttggagactggattaaatgatgt 23363 Score = 46.1 bits (23), Expect = 0.57 Identities = 26/27 (96%) Strand = Plus / Plus Query: 135 gggcgcggctccgatccgcccgatccg 161 |||||| |||||||||||||||||||| Sbjct: 16937 gggcgccgctccgatccgcccgatccg 16963
>emb|CR855193.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0130B08, complete sequence Length = 93476 Score = 123 bits (62), Expect = 3e-24 Identities = 98/110 (89%) Strand = Plus / Plus Query: 1043 ggatactagctaattcgaagccttgtcccaagtgcaagcggcctattgaaaagaatcagg 1102 |||| ||||||||||| ||||||||||| |||||||||||||| |||||||| || |||| Sbjct: 75979 ggattctagctaattcaaagccttgtcctaagtgcaagcggcccattgaaaaaaaccagg 76038 Query: 1103 gctgcatgcacattacctgcacaccgccatgtaaatttgaattctgctgg 1152 | |||||||||||||| |||||||| ||||| |||||||| || |||||| Sbjct: 76039 gatgcatgcacattacatgcacacctccatgcaaatttgagttttgctgg 76088 Score = 117 bits (59), Expect = 2e-22 Identities = 140/167 (83%) Strand = Plus / Plus Query: 679 tatattggcacagctataaacgatggtccaggatgtttgatgttgagatgtcctgatcca 738 |||||| |||| ||||||| |||||||||||||| |||||||| |||||||||||||| Sbjct: 74924 tatattagcacttctataaatgatggtccaggatgcttgatgttaagatgtcctgatccg 74983 Query: 739 tcctgttctgctgctgttggacaagatatggttgatttattcgccagtgaggaggataag 798 ||||| | ||||||||||| ||||||||| | ||| | | || ||| ||||||| | Sbjct: 74984 tcctgcacagctgctgttggtcaagatatgatcaattcactggctgatgacgaggatagg 75043 Query: 799 gggaagtatgaacgatatctttgcagatcttacattgaagataatag 845 | ||||||| ||||||||| ||||||||||||||||||||||||| Sbjct: 75044 gaaaagtatgggcgatatcttcgcagatcttacattgaagataatag 75090 Score = 117 bits (59), Expect = 2e-22 Identities = 86/95 (90%) Strand = Plus / Plus Query: 1450 cagattgttgaatgtaggcgggtattgaagtggacttacgcatatggttattaccttcca 1509 |||||||| ||||||||| ||||||||||||||||||| || ||||||| |||||| ||| Sbjct: 76938 cagattgtcgaatgtaggagggtattgaagtggacttatgcttatggtttttacctccca 76997 Query: 1510 gaccatgaacatgccaaaaggcagttcttcgaata 1544 || ||||||||||||||||| |||||||| ||||| Sbjct: 76998 gagcatgaacatgccaaaagacagttctttgaata 77032 Score = 107 bits (54), Expect = 2e-19 Identities = 87/98 (88%) Strand = Plus / Plus Query: 226 gactccgccgacgaggacttctacagcggcggcgaggcgggcctcgccctcagcgacgac 285 |||||||||||||| ||||||||||||||||| ||||| || |||| | ||||||||| Sbjct: 71196 gactccgccgacgacgacttctacagcggcggggaggccgggctcggcgggagcgacgac 71255 Query: 286 ggggacgcggactacgacttcgcggaccgcgactccga 323 |||||||| |||||||||||||| |||| ||||||||| Sbjct: 71256 ggggacgccgactacgacttcgccgaccacgactccga 71293 Score = 103 bits (52), Expect = 3e-18 Identities = 73/80 (91%) Strand = Plus / Plus Query: 1252 tctgaaaggagaagagaaatggcaaagaactccctcgagagatatacacattactacgag 1311 |||||||||||||||||||||||||||||||| || |||||||||||||| || || || Sbjct: 76363 tctgaaaggagaagagaaatggcaaagaactcgcttgagagatatacacactattatgaa 76422 Query: 1312 cgatgggcagccaatcagtc 1331 || ||||||||||||||||| Sbjct: 76423 cggtgggcagccaatcagtc 76442 Score = 93.7 bits (47), Expect = 3e-15 Identities = 65/71 (91%) Strand = Plus / Plus Query: 850 acaaaatggtgtcctgctcctggctgcgaatatgctgtggaatttgtcgttggcagtggc 909 ||||||||||||||||||||||| || ||||||||||| ||||||||| | |||||||| Sbjct: 75430 acaaaatggtgtcctgctcctggatgtgaatatgctgtagaatttgtcatgggcagtggt 75489 Query: 910 agctatgatgt 920 ||||||||||| Sbjct: 75490 agctatgatgt 75500 Score = 85.7 bits (43), Expect = 7e-13 Identities = 103/123 (83%) Strand = Plus / Plus Query: 1551 aggtgaagcagaatctggtttggaacgccttcatcagtgtgcggagaaagaacttcagat 1610 |||||| || ||||| |||||||| || || ||||| ||||| |||||||||||||| | Sbjct: 77122 aggtgaggcggaatcaggtttggagcggctgcatcaatgtgcagagaaagaacttcaagt 77181 Query: 1611 ctatctcgatgcagactgcccatctaaagatttcaatgacttccgtacaaaattggctgg 1670 || || || ||||| | || || |||||||||||||||||||||||||| |||||||| Sbjct: 77182 ataccttgaagcagaatctccctcaaaagatttcaatgacttccgtacaaagttggctgg 77241 Query: 1671 att 1673 ||| Sbjct: 77242 att 77244 Score = 83.8 bits (42), Expect = 3e-12 Identities = 69/78 (88%) Strand = Plus / Plus Query: 406 gatgacatgaatcgggtttcaactgttctttcaatttcaaaatcagaagcatgcgccctt 465 ||||| || ||| |||||||||||||||||||||||||||| ||||||||||| | ||| Sbjct: 73645 gatgatataaatagggtttcaactgttctttcaatttcaaagtcagaagcatgtgttctt 73704 Query: 466 cttcgcagttataactgg 483 ||||| | |||||||||| Sbjct: 73705 cttcgtaattataactgg 73722 Score = 79.8 bits (40), Expect = 4e-11 Identities = 79/92 (85%) Strand = Plus / Plus Query: 1151 ggctttgtcttggtccatggtcagatcacggggagaggacaggtggtttttatgcttgta 1210 |||| ||||||||||||||||| || || || || |||| ||||| |||||||| |||| Sbjct: 76173 ggctgtgtcttggtccatggtcggagcatggagaacggactggtggattttatgcctgta 76232 Query: 1211 atcgttatgaggcagcaaggcaagagggagcg 1242 | |||||||||||||||||||| || |||||| Sbjct: 76233 accgttatgaggcagcaaggcaggaaggagcg 76264 Score = 75.8 bits (38), Expect = 6e-10 Identities = 74/86 (86%) Strand = Plus / Plus Query: 592 tgtgggatttgcttcgaaagttgtccacgtgagtcaatgggtgctgcttcatgtgggcat 651 ||||| ||||| ||||||| |||||| ||| ||||||| |||||||| ||||||| ||| Sbjct: 74747 tgtggaatttgtttcgaaaattgtcctcgtacgtcaatgagtgctgctgcatgtggccat 74806 Query: 652 cctttctgtggtgtatgttggagagg 677 || |||||| ||| |||||||||||| Sbjct: 74807 ccgttctgtagtgcatgttggagagg 74832 Score = 75.8 bits (38), Expect = 6e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 1379 agcttgaaaaactaagtgacatacaaagccaacctgagtcacagcttaagttcataattg 1438 |||||||||| ||||||| |||||||||||||| ||||||||||| |||||||| || | Sbjct: 76786 agcttgaaaagttaagtgatatacaaagccaaccagagtcacagctcaagttcatcatag 76845 Query: 1439 aagcatggttacag 1452 | || ||||||||| Sbjct: 76846 aggcttggttacag 76859 Score = 67.9 bits (34), Expect = 2e-07 Identities = 76/90 (84%) Strand = Plus / Plus Query: 955 tgcacggaggaagctcatcgccctgtagattgttccacagtttccaaatggattctcaag 1014 ||||| |||||||||||||| || || || ||| |||| ||||| || ||||| |||||| Sbjct: 75607 tgcactgaggaagctcatcgtccggtcgactgtgccactgtttcaaagtggatcctcaag 75666 Query: 1015 aatagtgcggaatccgagaatatgaactgg 1044 || |||||||| || || |||||||||||| Sbjct: 75667 aacagtgcggagtctgaaaatatgaactgg 75696 Score = 63.9 bits (32), Expect = 2e-06 Identities = 80/96 (83%) Strand = Plus / Plus Query: 490 agtaaggtgcatgatgagtggtttgttgatgaagcacgagttcgtactgctgttggttta 549 ||||||||||||||||| ||||||| |||||||| || ||||||| | ||||||||| Sbjct: 74312 agtaaggtgcatgatgaatggtttgctgatgaagaacatgttcgtaaggttgttggtttt 74371 Query: 550 ccggagaagcaaaatgaaatgccaaacgaaagagaa 585 ||||| |||| | ||||||||||| || |||||| Sbjct: 74372 ccggaaaagctcatcgaaatgccaaatgacagagaa 74407 Score = 56.0 bits (28), Expect = 6e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 1684 actcgcaattattttgaaaacctggtccgtgcattggagtctggattgaatgatgt 1739 |||||||||||||| || ||||| ||||| || |||||| ||||||| |||||||| Sbjct: 77436 actcgcaattatttcgagaaccttgtccgggctttggagactggattaaatgatgt 77491 Score = 46.1 bits (23), Expect = 0.57 Identities = 26/27 (96%) Strand = Plus / Plus Query: 135 gggcgcggctccgatccgcccgatccg 161 |||||| |||||||||||||||||||| Sbjct: 71065 gggcgccgctccgatccgcccgatccg 71091
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 123 bits (62), Expect = 3e-24 Identities = 98/110 (89%) Strand = Plus / Plus Query: 1043 ggatactagctaattcgaagccttgtcccaagtgcaagcggcctattgaaaagaatcagg 1102 |||| ||||||||||| ||||||||||| |||||||||||||| |||||||| || |||| Sbjct: 24561796 ggattctagctaattcaaagccttgtcctaagtgcaagcggcccattgaaaaaaaccagg 24561855 Query: 1103 gctgcatgcacattacctgcacaccgccatgtaaatttgaattctgctgg 1152 | |||||||||||||| |||||||| ||||| |||||||| || |||||| Sbjct: 24561856 gatgcatgcacattacatgcacacctccatgcaaatttgagttttgctgg 24561905 Score = 117 bits (59), Expect = 2e-22 Identities = 140/167 (83%) Strand = Plus / Plus Query: 679 tatattggcacagctataaacgatggtccaggatgtttgatgttgagatgtcctgatcca 738 |||||| |||| ||||||| |||||||||||||| |||||||| |||||||||||||| Sbjct: 24560739 tatattagcacttctataaatgatggtccaggatgcttgatgttaagatgtcctgatccg 24560798 Query: 739 tcctgttctgctgctgttggacaagatatggttgatttattcgccagtgaggaggataag 798 ||||| | ||||||||||| ||||||||| | ||| | | || ||| ||||||| | Sbjct: 24560799 tcctgcacagctgctgttggtcaagatatgatcaattcactggctgatgacgaggatagg 24560858 Query: 799 gggaagtatgaacgatatctttgcagatcttacattgaagataatag 845 | ||||||| ||||||||| ||||||||||||||||||||||||| Sbjct: 24560859 gaaaagtatgggcgatatcttcgcagatcttacattgaagataatag 24560905 Score = 117 bits (59), Expect = 2e-22 Identities = 86/95 (90%) Strand = Plus / Plus Query: 1450 cagattgttgaatgtaggcgggtattgaagtggacttacgcatatggttattaccttcca 1509 |||||||| ||||||||| ||||||||||||||||||| || ||||||| |||||| ||| Sbjct: 24562755 cagattgtcgaatgtaggagggtattgaagtggacttatgcttatggtttttacctccca 24562814 Query: 1510 gaccatgaacatgccaaaaggcagttcttcgaata 1544 || ||||||||||||||||| |||||||| ||||| Sbjct: 24562815 gagcatgaacatgccaaaagacagttctttgaata 24562849 Score = 107 bits (54), Expect = 2e-19 Identities = 87/98 (88%) Strand = Plus / Plus Query: 226 gactccgccgacgaggacttctacagcggcggcgaggcgggcctcgccctcagcgacgac 285 |||||||||||||| ||||||||||||||||| ||||| || |||| | ||||||||| Sbjct: 24557012 gactccgccgacgacgacttctacagcggcggggaggccgggctcggcgggagcgacgac 24557071 Query: 286 ggggacgcggactacgacttcgcggaccgcgactccga 323 |||||||| |||||||||||||| |||| ||||||||| Sbjct: 24557072 ggggacgccgactacgacttcgccgaccacgactccga 24557109 Score = 103 bits (52), Expect = 3e-18 Identities = 73/80 (91%) Strand = Plus / Plus Query: 1252 tctgaaaggagaagagaaatggcaaagaactccctcgagagatatacacattactacgag 1311 |||||||||||||||||||||||||||||||| || |||||||||||||| || || || Sbjct: 24562180 tctgaaaggagaagagaaatggcaaagaactcgcttgagagatatacacactattatgaa 24562239 Query: 1312 cgatgggcagccaatcagtc 1331 || ||||||||||||||||| Sbjct: 24562240 cggtgggcagccaatcagtc 24562259 Score = 93.7 bits (47), Expect = 3e-15 Identities = 65/71 (91%) Strand = Plus / Plus Query: 850 acaaaatggtgtcctgctcctggctgcgaatatgctgtggaatttgtcgttggcagtggc 909 ||||||||||||||||||||||| || ||||||||||| ||||||||| | |||||||| Sbjct: 24561247 acaaaatggtgtcctgctcctggatgtgaatatgctgtagaatttgtcatgggcagtggt 24561306 Query: 910 agctatgatgt 920 ||||||||||| Sbjct: 24561307 agctatgatgt 24561317 Score = 85.7 bits (43), Expect = 7e-13 Identities = 103/123 (83%) Strand = Plus / Plus Query: 1551 aggtgaagcagaatctggtttggaacgccttcatcagtgtgcggagaaagaacttcagat 1610 |||||| || ||||| |||||||| || || ||||| ||||| |||||||||||||| | Sbjct: 24562939 aggtgaggcggaatcaggtttggagcggctgcatcaatgtgcagagaaagaacttcaagt 24562998 Query: 1611 ctatctcgatgcagactgcccatctaaagatttcaatgacttccgtacaaaattggctgg 1670 || || || ||||| | || || |||||||||||||||||||||||||| |||||||| Sbjct: 24562999 ataccttgaagcagaatctccctcaaaagatttcaatgacttccgtacaaagttggctgg 24563058 Query: 1671 att 1673 ||| Sbjct: 24563059 att 24563061 Score = 83.8 bits (42), Expect = 3e-12 Identities = 69/78 (88%) Strand = Plus / Plus Query: 406 gatgacatgaatcgggtttcaactgttctttcaatttcaaaatcagaagcatgcgccctt 465 ||||| || ||| |||||||||||||||||||||||||||| ||||||||||| | ||| Sbjct: 24559461 gatgatataaatagggtttcaactgttctttcaatttcaaagtcagaagcatgtgttctt 24559520 Query: 466 cttcgcagttataactgg 483 ||||| | |||||||||| Sbjct: 24559521 cttcgtaattataactgg 24559538 Score = 79.8 bits (40), Expect = 4e-11 Identities = 79/92 (85%) Strand = Plus / Plus Query: 1151 ggctttgtcttggtccatggtcagatcacggggagaggacaggtggtttttatgcttgta 1210 |||| ||||||||||||||||| || || || || |||| ||||| |||||||| |||| Sbjct: 24561990 ggctgtgtcttggtccatggtcggagcatggagaacggactggtggattttatgcctgta 24562049 Query: 1211 atcgttatgaggcagcaaggcaagagggagcg 1242 | |||||||||||||||||||| || |||||| Sbjct: 24562050 accgttatgaggcagcaaggcaggaaggagcg 24562081 Score = 75.8 bits (38), Expect = 6e-10 Identities = 74/86 (86%) Strand = Plus / Plus Query: 592 tgtgggatttgcttcgaaagttgtccacgtgagtcaatgggtgctgcttcatgtgggcat 651 ||||| ||||| ||||||| |||||| ||| ||||||| |||||||| ||||||| ||| Sbjct: 24560562 tgtggaatttgtttcgaaaattgtcctcgtacgtcaatgagtgctgctgcatgtggccat 24560621 Query: 652 cctttctgtggtgtatgttggagagg 677 || |||||| ||| |||||||||||| Sbjct: 24560622 ccgttctgtagtgcatgttggagagg 24560647 Score = 75.8 bits (38), Expect = 6e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 955 tgcacggaggaagctcatcgccctgtagattgttccacagtttccaaatggattctcaag 1014 ||||| |||||||||||||| || ||||| ||| |||| ||||| || ||||| |||||| Sbjct: 24561424 tgcactgaggaagctcatcgtccggtagactgtgccactgtttcaaagtggatcctcaag 24561483 Query: 1015 aatagtgcggaatccgagaatatgaactgg 1044 || |||||||| || || |||||||||||| Sbjct: 24561484 aacagtgcggagtctgaaaatatgaactgg 24561513 Score = 75.8 bits (38), Expect = 6e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 1379 agcttgaaaaactaagtgacatacaaagccaacctgagtcacagcttaagttcataattg 1438 |||||||||| ||||||| |||||||||||||| ||||||||||| |||||||| || | Sbjct: 24562603 agcttgaaaagttaagtgatatacaaagccaaccagagtcacagctcaagttcatcatag 24562662 Query: 1439 aagcatggttacag 1452 | || ||||||||| Sbjct: 24562663 aggcttggttacag 24562676 Score = 63.9 bits (32), Expect = 2e-06 Identities = 80/96 (83%) Strand = Plus / Plus Query: 490 agtaaggtgcatgatgagtggtttgttgatgaagcacgagttcgtactgctgttggttta 549 ||||||||||||||||| ||||||| |||||||| || ||||||| | ||||||||| Sbjct: 24560127 agtaaggtgcatgatgaatggtttgctgatgaagaacatgttcgtaaggttgttggtttt 24560186 Query: 550 ccggagaagcaaaatgaaatgccaaacgaaagagaa 585 ||||| |||| | ||||||||||| || |||||| Sbjct: 24560187 ccggaaaagctcatcgaaatgccaaatgacagagaa 24560222 Score = 56.0 bits (28), Expect = 6e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 1684 actcgcaattattttgaaaacctggtccgtgcattggagtctggattgaatgatgt 1739 |||||||||||||| || ||||| ||||| || |||||| ||||||| |||||||| Sbjct: 24563253 actcgcaattatttcgagaaccttgtccgggctttggagactggattaaatgatgt 24563308 Score = 46.1 bits (23), Expect = 0.57 Identities = 23/23 (100%) Strand = Plus / Plus Query: 179 cggtgcgcgaggcggcggcggcg 201 ||||||||||||||||||||||| Sbjct: 17097874 cggtgcgcgaggcggcggcggcg 17097896 Score = 46.1 bits (23), Expect = 0.57 Identities = 26/27 (96%) Strand = Plus / Plus Query: 135 gggcgcggctccgatccgcccgatccg 161 |||||| |||||||||||||||||||| Sbjct: 24556881 gggcgccgctccgatccgcccgatccg 24556907
>emb|AL731617.3|OSJN00261 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0076N16, complete sequence Length = 146313 Score = 123 bits (62), Expect = 3e-24 Identities = 98/110 (89%) Strand = Plus / Plus Query: 1043 ggatactagctaattcgaagccttgtcccaagtgcaagcggcctattgaaaagaatcagg 1102 |||| ||||||||||| ||||||||||| |||||||||||||| |||||||| || |||| Sbjct: 121427 ggattctagctaattcaaagccttgtcctaagtgcaagcggcccattgaaaaaaaccagg 121486 Query: 1103 gctgcatgcacattacctgcacaccgccatgtaaatttgaattctgctgg 1152 | |||||||||||||| |||||||| ||||| |||||||| || |||||| Sbjct: 121487 gatgcatgcacattacatgcacacctccatgcaaatttgagttttgctgg 121536 Score = 117 bits (59), Expect = 2e-22 Identities = 140/167 (83%) Strand = Plus / Plus Query: 679 tatattggcacagctataaacgatggtccaggatgtttgatgttgagatgtcctgatcca 738 |||||| |||| ||||||| |||||||||||||| |||||||| |||||||||||||| Sbjct: 120370 tatattagcacttctataaatgatggtccaggatgcttgatgttaagatgtcctgatccg 120429 Query: 739 tcctgttctgctgctgttggacaagatatggttgatttattcgccagtgaggaggataag 798 ||||| | ||||||||||| ||||||||| | ||| | | || ||| ||||||| | Sbjct: 120430 tcctgcacagctgctgttggtcaagatatgatcaattcactggctgatgacgaggatagg 120489 Query: 799 gggaagtatgaacgatatctttgcagatcttacattgaagataatag 845 | ||||||| ||||||||| ||||||||||||||||||||||||| Sbjct: 120490 gaaaagtatgggcgatatcttcgcagatcttacattgaagataatag 120536 Score = 117 bits (59), Expect = 2e-22 Identities = 86/95 (90%) Strand = Plus / Plus Query: 1450 cagattgttgaatgtaggcgggtattgaagtggacttacgcatatggttattaccttcca 1509 |||||||| ||||||||| ||||||||||||||||||| || ||||||| |||||| ||| Sbjct: 122386 cagattgtcgaatgtaggagggtattgaagtggacttatgcttatggtttttacctccca 122445 Query: 1510 gaccatgaacatgccaaaaggcagttcttcgaata 1544 || ||||||||||||||||| |||||||| ||||| Sbjct: 122446 gagcatgaacatgccaaaagacagttctttgaata 122480 Score = 107 bits (54), Expect = 2e-19 Identities = 87/98 (88%) Strand = Plus / Plus Query: 226 gactccgccgacgaggacttctacagcggcggcgaggcgggcctcgccctcagcgacgac 285 |||||||||||||| ||||||||||||||||| ||||| || |||| | ||||||||| Sbjct: 116643 gactccgccgacgacgacttctacagcggcggggaggccgggctcggcgggagcgacgac 116702 Query: 286 ggggacgcggactacgacttcgcggaccgcgactccga 323 |||||||| |||||||||||||| |||| ||||||||| Sbjct: 116703 ggggacgccgactacgacttcgccgaccacgactccga 116740 Score = 103 bits (52), Expect = 3e-18 Identities = 73/80 (91%) Strand = Plus / Plus Query: 1252 tctgaaaggagaagagaaatggcaaagaactccctcgagagatatacacattactacgag 1311 |||||||||||||||||||||||||||||||| || |||||||||||||| || || || Sbjct: 121811 tctgaaaggagaagagaaatggcaaagaactcgcttgagagatatacacactattatgaa 121870 Query: 1312 cgatgggcagccaatcagtc 1331 || ||||||||||||||||| Sbjct: 121871 cggtgggcagccaatcagtc 121890 Score = 93.7 bits (47), Expect = 3e-15 Identities = 65/71 (91%) Strand = Plus / Plus Query: 850 acaaaatggtgtcctgctcctggctgcgaatatgctgtggaatttgtcgttggcagtggc 909 ||||||||||||||||||||||| || ||||||||||| ||||||||| | |||||||| Sbjct: 120878 acaaaatggtgtcctgctcctggatgtgaatatgctgtagaatttgtcatgggcagtggt 120937 Query: 910 agctatgatgt 920 ||||||||||| Sbjct: 120938 agctatgatgt 120948 Score = 85.7 bits (43), Expect = 7e-13 Identities = 103/123 (83%) Strand = Plus / Plus Query: 1551 aggtgaagcagaatctggtttggaacgccttcatcagtgtgcggagaaagaacttcagat 1610 |||||| || ||||| |||||||| || || ||||| ||||| |||||||||||||| | Sbjct: 122570 aggtgaggcggaatcaggtttggagcggctgcatcaatgtgcagagaaagaacttcaagt 122629 Query: 1611 ctatctcgatgcagactgcccatctaaagatttcaatgacttccgtacaaaattggctgg 1670 || || || ||||| | || || |||||||||||||||||||||||||| |||||||| Sbjct: 122630 ataccttgaagcagaatctccctcaaaagatttcaatgacttccgtacaaagttggctgg 122689 Query: 1671 att 1673 ||| Sbjct: 122690 att 122692 Score = 83.8 bits (42), Expect = 3e-12 Identities = 69/78 (88%) Strand = Plus / Plus Query: 406 gatgacatgaatcgggtttcaactgttctttcaatttcaaaatcagaagcatgcgccctt 465 ||||| || ||| |||||||||||||||||||||||||||| ||||||||||| | ||| Sbjct: 119092 gatgatataaatagggtttcaactgttctttcaatttcaaagtcagaagcatgtgttctt 119151 Query: 466 cttcgcagttataactgg 483 ||||| | |||||||||| Sbjct: 119152 cttcgtaattataactgg 119169 Score = 79.8 bits (40), Expect = 4e-11 Identities = 79/92 (85%) Strand = Plus / Plus Query: 1151 ggctttgtcttggtccatggtcagatcacggggagaggacaggtggtttttatgcttgta 1210 |||| ||||||||||||||||| || || || || |||| ||||| |||||||| |||| Sbjct: 121621 ggctgtgtcttggtccatggtcggagcatggagaacggactggtggattttatgcctgta 121680 Query: 1211 atcgttatgaggcagcaaggcaagagggagcg 1242 | |||||||||||||||||||| || |||||| Sbjct: 121681 accgttatgaggcagcaaggcaggaaggagcg 121712 Score = 75.8 bits (38), Expect = 6e-10 Identities = 74/86 (86%) Strand = Plus / Plus Query: 592 tgtgggatttgcttcgaaagttgtccacgtgagtcaatgggtgctgcttcatgtgggcat 651 ||||| ||||| ||||||| |||||| ||| ||||||| |||||||| ||||||| ||| Sbjct: 120193 tgtggaatttgtttcgaaaattgtcctcgtacgtcaatgagtgctgctgcatgtggccat 120252 Query: 652 cctttctgtggtgtatgttggagagg 677 || |||||| ||| |||||||||||| Sbjct: 120253 ccgttctgtagtgcatgttggagagg 120278 Score = 75.8 bits (38), Expect = 6e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 955 tgcacggaggaagctcatcgccctgtagattgttccacagtttccaaatggattctcaag 1014 ||||| |||||||||||||| || ||||| ||| |||| ||||| || ||||| |||||| Sbjct: 121055 tgcactgaggaagctcatcgtccggtagactgtgccactgtttcaaagtggatcctcaag 121114 Query: 1015 aatagtgcggaatccgagaatatgaactgg 1044 || |||||||| || || |||||||||||| Sbjct: 121115 aacagtgcggagtctgaaaatatgaactgg 121144 Score = 75.8 bits (38), Expect = 6e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 1379 agcttgaaaaactaagtgacatacaaagccaacctgagtcacagcttaagttcataattg 1438 |||||||||| ||||||| |||||||||||||| ||||||||||| |||||||| || | Sbjct: 122234 agcttgaaaagttaagtgatatacaaagccaaccagagtcacagctcaagttcatcatag 122293 Query: 1439 aagcatggttacag 1452 | || ||||||||| Sbjct: 122294 aggcttggttacag 122307 Score = 63.9 bits (32), Expect = 2e-06 Identities = 80/96 (83%) Strand = Plus / Plus Query: 490 agtaaggtgcatgatgagtggtttgttgatgaagcacgagttcgtactgctgttggttta 549 ||||||||||||||||| ||||||| |||||||| || ||||||| | ||||||||| Sbjct: 119758 agtaaggtgcatgatgaatggtttgctgatgaagaacatgttcgtaaggttgttggtttt 119817 Query: 550 ccggagaagcaaaatgaaatgccaaacgaaagagaa 585 ||||| |||| | ||||||||||| || |||||| Sbjct: 119818 ccggaaaagctcatcgaaatgccaaatgacagagaa 119853 Score = 56.0 bits (28), Expect = 6e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 1684 actcgcaattattttgaaaacctggtccgtgcattggagtctggattgaatgatgt 1739 |||||||||||||| || ||||| ||||| || |||||| ||||||| |||||||| Sbjct: 122884 actcgcaattatttcgagaaccttgtccgggctttggagactggattaaatgatgt 122939 Score = 46.1 bits (23), Expect = 0.57 Identities = 26/27 (96%) Strand = Plus / Plus Query: 135 gggcgcggctccgatccgcccgatccg 161 |||||| |||||||||||||||||||| Sbjct: 116512 gggcgccgctccgatccgcccgatccg 116538
>emb|AL662938.3|OSJN00138 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ990528_30, complete sequence Length = 88547 Score = 123 bits (62), Expect = 3e-24 Identities = 98/110 (89%) Strand = Plus / Plus Query: 1043 ggatactagctaattcgaagccttgtcccaagtgcaagcggcctattgaaaagaatcagg 1102 |||| ||||||||||| ||||||||||| |||||||||||||| |||||||| || |||| Sbjct: 16941 ggattctagctaattcaaagccttgtcctaagtgcaagcggcccattgaaaaaaaccagg 17000 Query: 1103 gctgcatgcacattacctgcacaccgccatgtaaatttgaattctgctgg 1152 | |||||||||||||| |||||||| ||||| |||||||| || |||||| Sbjct: 17001 gatgcatgcacattacatgcacacctccatgcaaatttgagttttgctgg 17050 Score = 117 bits (59), Expect = 2e-22 Identities = 140/167 (83%) Strand = Plus / Plus Query: 679 tatattggcacagctataaacgatggtccaggatgtttgatgttgagatgtcctgatcca 738 |||||| |||| ||||||| |||||||||||||| |||||||| |||||||||||||| Sbjct: 15884 tatattagcacttctataaatgatggtccaggatgcttgatgttaagatgtcctgatccg 15943 Query: 739 tcctgttctgctgctgttggacaagatatggttgatttattcgccagtgaggaggataag 798 ||||| | ||||||||||| ||||||||| | ||| | | || ||| ||||||| | Sbjct: 15944 tcctgcacagctgctgttggtcaagatatgatcaattcactggctgatgacgaggatagg 16003 Query: 799 gggaagtatgaacgatatctttgcagatcttacattgaagataatag 845 | ||||||| ||||||||| ||||||||||||||||||||||||| Sbjct: 16004 gaaaagtatgggcgatatcttcgcagatcttacattgaagataatag 16050 Score = 117 bits (59), Expect = 2e-22 Identities = 86/95 (90%) Strand = Plus / Plus Query: 1450 cagattgttgaatgtaggcgggtattgaagtggacttacgcatatggttattaccttcca 1509 |||||||| ||||||||| ||||||||||||||||||| || ||||||| |||||| ||| Sbjct: 17900 cagattgtcgaatgtaggagggtattgaagtggacttatgcttatggtttttacctccca 17959 Query: 1510 gaccatgaacatgccaaaaggcagttcttcgaata 1544 || ||||||||||||||||| |||||||| ||||| Sbjct: 17960 gagcatgaacatgccaaaagacagttctttgaata 17994 Score = 107 bits (54), Expect = 2e-19 Identities = 87/98 (88%) Strand = Plus / Plus Query: 226 gactccgccgacgaggacttctacagcggcggcgaggcgggcctcgccctcagcgacgac 285 |||||||||||||| ||||||||||||||||| ||||| || |||| | ||||||||| Sbjct: 12157 gactccgccgacgacgacttctacagcggcggggaggccgggctcggcgggagcgacgac 12216 Query: 286 ggggacgcggactacgacttcgcggaccgcgactccga 323 |||||||| |||||||||||||| |||| ||||||||| Sbjct: 12217 ggggacgccgactacgacttcgccgaccacgactccga 12254 Score = 103 bits (52), Expect = 3e-18 Identities = 73/80 (91%) Strand = Plus / Plus Query: 1252 tctgaaaggagaagagaaatggcaaagaactccctcgagagatatacacattactacgag 1311 |||||||||||||||||||||||||||||||| || |||||||||||||| || || || Sbjct: 17325 tctgaaaggagaagagaaatggcaaagaactcgcttgagagatatacacactattatgaa 17384 Query: 1312 cgatgggcagccaatcagtc 1331 || ||||||||||||||||| Sbjct: 17385 cggtgggcagccaatcagtc 17404 Score = 93.7 bits (47), Expect = 3e-15 Identities = 65/71 (91%) Strand = Plus / Plus Query: 850 acaaaatggtgtcctgctcctggctgcgaatatgctgtggaatttgtcgttggcagtggc 909 ||||||||||||||||||||||| || ||||||||||| ||||||||| | |||||||| Sbjct: 16392 acaaaatggtgtcctgctcctggatgtgaatatgctgtagaatttgtcatgggcagtggt 16451 Query: 910 agctatgatgt 920 ||||||||||| Sbjct: 16452 agctatgatgt 16462 Score = 85.7 bits (43), Expect = 7e-13 Identities = 103/123 (83%) Strand = Plus / Plus Query: 1551 aggtgaagcagaatctggtttggaacgccttcatcagtgtgcggagaaagaacttcagat 1610 |||||| || ||||| |||||||| || || ||||| ||||| |||||||||||||| | Sbjct: 18084 aggtgaggcggaatcaggtttggagcggctgcatcaatgtgcagagaaagaacttcaagt 18143 Query: 1611 ctatctcgatgcagactgcccatctaaagatttcaatgacttccgtacaaaattggctgg 1670 || || || ||||| | || || |||||||||||||||||||||||||| |||||||| Sbjct: 18144 ataccttgaagcagaatctccctcaaaagatttcaatgacttccgtacaaagttggctgg 18203 Query: 1671 att 1673 ||| Sbjct: 18204 att 18206 Score = 83.8 bits (42), Expect = 3e-12 Identities = 69/78 (88%) Strand = Plus / Plus Query: 406 gatgacatgaatcgggtttcaactgttctttcaatttcaaaatcagaagcatgcgccctt 465 ||||| || ||| |||||||||||||||||||||||||||| ||||||||||| | ||| Sbjct: 14606 gatgatataaatagggtttcaactgttctttcaatttcaaagtcagaagcatgtgttctt 14665 Query: 466 cttcgcagttataactgg 483 ||||| | |||||||||| Sbjct: 14666 cttcgtaattataactgg 14683 Score = 79.8 bits (40), Expect = 4e-11 Identities = 79/92 (85%) Strand = Plus / Plus Query: 1151 ggctttgtcttggtccatggtcagatcacggggagaggacaggtggtttttatgcttgta 1210 |||| ||||||||||||||||| || || || || |||| ||||| |||||||| |||| Sbjct: 17135 ggctgtgtcttggtccatggtcggagcatggagaacggactggtggattttatgcctgta 17194 Query: 1211 atcgttatgaggcagcaaggcaagagggagcg 1242 | |||||||||||||||||||| || |||||| Sbjct: 17195 accgttatgaggcagcaaggcaggaaggagcg 17226 Score = 75.8 bits (38), Expect = 6e-10 Identities = 74/86 (86%) Strand = Plus / Plus Query: 592 tgtgggatttgcttcgaaagttgtccacgtgagtcaatgggtgctgcttcatgtgggcat 651 ||||| ||||| ||||||| |||||| ||| ||||||| |||||||| ||||||| ||| Sbjct: 15707 tgtggaatttgtttcgaaaattgtcctcgtacgtcaatgagtgctgctgcatgtggccat 15766 Query: 652 cctttctgtggtgtatgttggagagg 677 || |||||| ||| |||||||||||| Sbjct: 15767 ccgttctgtagtgcatgttggagagg 15792 Score = 75.8 bits (38), Expect = 6e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 955 tgcacggaggaagctcatcgccctgtagattgttccacagtttccaaatggattctcaag 1014 ||||| |||||||||||||| || ||||| ||| |||| ||||| || ||||| |||||| Sbjct: 16569 tgcactgaggaagctcatcgtccggtagactgtgccactgtttcaaagtggatcctcaag 16628 Query: 1015 aatagtgcggaatccgagaatatgaactgg 1044 || |||||||| || || |||||||||||| Sbjct: 16629 aacagtgcggagtctgaaaatatgaactgg 16658 Score = 75.8 bits (38), Expect = 6e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 1379 agcttgaaaaactaagtgacatacaaagccaacctgagtcacagcttaagttcataattg 1438 |||||||||| ||||||| |||||||||||||| ||||||||||| |||||||| || | Sbjct: 17748 agcttgaaaagttaagtgatatacaaagccaaccagagtcacagctcaagttcatcatag 17807 Query: 1439 aagcatggttacag 1452 | || ||||||||| Sbjct: 17808 aggcttggttacag 17821 Score = 63.9 bits (32), Expect = 2e-06 Identities = 80/96 (83%) Strand = Plus / Plus Query: 490 agtaaggtgcatgatgagtggtttgttgatgaagcacgagttcgtactgctgttggttta 549 ||||||||||||||||| ||||||| |||||||| || ||||||| | ||||||||| Sbjct: 15272 agtaaggtgcatgatgaatggtttgctgatgaagaacatgttcgtaaggttgttggtttt 15331 Query: 550 ccggagaagcaaaatgaaatgccaaacgaaagagaa 585 ||||| |||| | ||||||||||| || |||||| Sbjct: 15332 ccggaaaagctcatcgaaatgccaaatgacagagaa 15367 Score = 56.0 bits (28), Expect = 6e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 1684 actcgcaattattttgaaaacctggtccgtgcattggagtctggattgaatgatgt 1739 |||||||||||||| || ||||| ||||| || |||||| ||||||| |||||||| Sbjct: 18398 actcgcaattatttcgagaaccttgtccgggctttggagactggattaaatgatgt 18453 Score = 46.1 bits (23), Expect = 0.57 Identities = 26/27 (96%) Strand = Plus / Plus Query: 135 gggcgcggctccgatccgcccgatccg 161 |||||| |||||||||||||||||||| Sbjct: 12026 gggcgccgctccgatccgcccgatccg 12052
>emb|BX820609.1|CNS0A9N8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH52ZC07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1094 Score = 117 bits (59), Expect = 2e-22 Identities = 113/131 (86%) Strand = Plus / Plus Query: 1092 aaagaatcagggctgcatgcacattacctgcacaccgccatgtaaatttgaattctgctg 1151 ||||||||||||||| |||||||| || || |||||||| ||||||| |||||| || || Sbjct: 1 aaagaatcagggctgtatgcacatgacatgtacaccgccttgtaaatatgaattttgttg 60 Query: 1152 gctttgtcttggtccatggtcagatcacggggagaggacaggtggtttttatgcttgtaa 1211 ||| ||||||||| ||||| ||||||||||| || || |||||||||||||||||| | Sbjct: 61 gctatgtcttggtgcatggatggatcacggggaaagaactggtggtttttatgcttgtta 120 Query: 1212 tcgttatgagg 1222 |||||||||| Sbjct: 121 ccgttatgagg 131 Score = 58.0 bits (29), Expect = 2e-04 Identities = 59/69 (85%) Strand = Plus / Plus Query: 1459 gaatgtaggcgggtattgaagtggacttacgcatatggttattaccttccagaccatgaa 1518 ||||||||||| || |||| |||||||| |||||||| || ||||| || || |||||| Sbjct: 368 gaatgtaggcgagtcttgatatggacttatgcatatggatactacctacctgagcatgaa 427 Query: 1519 catgccaaa 1527 ||||||||| Sbjct: 428 catgccaaa 436 Score = 50.1 bits (25), Expect = 0.037 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1630 ccatctaaagatttcaatgacttccgtacaaaattggctggattgaccagcgt 1682 ||||| |||||||||||||| ||||| |||||| | ||||| |||||| |||| Sbjct: 539 ccatcaaaagatttcaatgatttccggacaaaactagctggtttgacctgcgt 591
>ref|NM_001070189.1| Oryza sativa (japonica cultivar-group) Os09g0513800 (Os09g0513800) mRNA, partial cds Length = 2324 Score = 113 bits (57), Expect = 3e-21 Identities = 186/229 (81%) Strand = Plus / Plus Query: 990 cacagtttccaaatggattctcaagaatagtgcggaatccgagaatatgaactggatact 1049 |||||| || || ||||| || ||||| || || ||||| || || ||||| |||||| | Sbjct: 936 cacagtctcaaagtggatactaaagaacagcgcagaatctgaaaacatgaattggatatt 995 Query: 1050 agctaattcgaagccttgtcccaagtgcaagcggcctattgaaaagaatcagggctgcat 1109 |||| |||| ||||| ||||| || ||||| || ||||| || ||||||||||| ||||| Sbjct: 996 agcttattctaagccctgtccgaaatgcaaacgacctatagagaagaatcagggatgcat 1055 Query: 1110 gcacattacctgcacaccgccatgtaaatttgaattctgctggctttgtcttggtccatg 1169 ||| || || ||||| || || ||||||||||| || |||||| | || || ||| |||| Sbjct: 1056 gcatatgacatgcactcctccttgtaaatttgagttttgctggttatgcctaggtgcatg 1115 Query: 1170 gtcagatcacggggagaggacaggtggtttttatgcttgtaatcgttat 1218 ||||||||| || || |||| ||||| ||||||||||| ||||||||| Sbjct: 1116 gtcagatcatggagatgggactggtggcttttatgcttgcaatcgttat 1164 Score = 44.1 bits (22), Expect = 2.3 Identities = 43/50 (86%) Strand = Plus / Plus Query: 1549 caaggtgaagcagaatctggtttggaacgccttcatcagtgtgcggagaa 1598 ||||||||||| || ||||||||||| || |||||| | ||||| ||||| Sbjct: 1489 caaggtgaagctgagtctggtttggagcgtcttcataaatgtgccgagaa 1538
>dbj|AK106673.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-A03, full insert sequence Length = 2323 Score = 113 bits (57), Expect = 3e-21 Identities = 186/229 (81%) Strand = Plus / Plus Query: 990 cacagtttccaaatggattctcaagaatagtgcggaatccgagaatatgaactggatact 1049 |||||| || || ||||| || ||||| || || ||||| || || ||||| |||||| | Sbjct: 936 cacagtctcaaagtggatactaaagaacagcgcagaatctgaaaacatgaattggatatt 995 Query: 1050 agctaattcgaagccttgtcccaagtgcaagcggcctattgaaaagaatcagggctgcat 1109 |||| |||| ||||| ||||| || ||||| || ||||| || ||||||||||| ||||| Sbjct: 996 agcttattctaagccctgtccgaaatgcaaacgacctatagagaagaatcagggatgcat 1055 Query: 1110 gcacattacctgcacaccgccatgtaaatttgaattctgctggctttgtcttggtccatg 1169 ||| || || ||||| || || ||||||||||| || |||||| | || || ||| |||| Sbjct: 1056 gcatatgacatgcactcctccttgtaaatttgagttttgctggttatgcctaggtgcatg 1115 Query: 1170 gtcagatcacggggagaggacaggtggtttttatgcttgtaatcgttat 1218 ||||||||| || || |||| ||||| ||||||||||| ||||||||| Sbjct: 1116 gtcagatcatggagatgggactggtggcttttatgcttgcaatcgttat 1164 Score = 44.1 bits (22), Expect = 2.3 Identities = 43/50 (86%) Strand = Plus / Plus Query: 1549 caaggtgaagcagaatctggtttggaacgccttcatcagtgtgcggagaa 1598 ||||||||||| || ||||||||||| || |||||| | ||||| ||||| Sbjct: 1488 caaggtgaagctgagtctggtttggagcgtcttcataaatgtgccgagaa 1537
>emb|CT030177.6| M.truncatula DNA sequence from clone MTH2-154J16 on chromosome 3, complete sequence Length = 126881 Score = 111 bits (56), Expect = 1e-20 Identities = 92/104 (88%) Strand = Plus / Minus Query: 1393 agtgacatacaaagccaacctgagtcacagcttaagttcataattgaagcatggttacag 1452 ||||||||||| ||||||||||||| |||||||||||||||| || || ||||||||| Sbjct: 18976 agtgacatacagtgccaacctgagtcgcagcttaagttcataaccgaggcttggttacag 18917 Query: 1453 attgttgaatgtaggcgggtattgaagtggacttacgcatatgg 1496 || ||||| || |||||||||||||||||||| || |||||||| Sbjct: 18916 atagttgagtgcaggcgggtattgaagtggacatatgcatatgg 18873 Score = 107 bits (54), Expect = 2e-19 Identities = 150/182 (82%) Strand = Plus / Minus Query: 1393 agtgacatacaaagccaacctgagtcacagcttaagttcataattgaagcatggttacag 1452 |||| |||||| |||||||||||||||||||||||||||| | || || ||||||||| Sbjct: 4131 agtgtcatacagtgccaacctgagtcacagcttaagttcattaccgaggcttggttacag 4072 Query: 1453 attgttgaatgtaggcgggtattgaagtggacttacgcatatggttattaccttccagac 1512 || ||||| || |||||||||||||||||||| || |||||||| || || | | || Sbjct: 4071 atagttgagtgcaggcgggtattgaagtggacatatgcatatggatactatttagctgag 4012 Query: 1513 catgaacatgccaaaaggcagttcttcgaatacgttcaaggtgaagcagaatctggtttg 1572 ||||| ||||| |||| |||| |||| || ||| | ||||||| |||||||| |||||| Sbjct: 4011 catgagcatgctaaaaagcagctctttgagtacttgcaaggtgtggcagaatcaggtttg 3952 Query: 1573 ga 1574 || Sbjct: 3951 ga 3950 Score = 73.8 bits (37), Expect = 3e-09 Identities = 82/97 (84%) Strand = Plus / Minus Query: 670 tggagaggctatattggcacagctataaacgatggtccaggatgtttgatgttgagatgt 729 |||||||| ||||||||||| | || ||||||||||| ||||| |||||| |||||||| Sbjct: 4995 tggagaggatatattggcacctcaatcaacgatggtccgggatgcttgatgctgagatgt 4936 Query: 730 cctgatccatcctgttctgctgctgttggacaagata 766 |||||||| | ||| ||||||||||| ||||||| Sbjct: 4935 cctgatcccgcttgtggtgctgctgttgatcaagata 4899 Score = 73.8 bits (37), Expect = 3e-09 Identities = 85/101 (84%) Strand = Plus / Minus Query: 674 gaggctatattggcacagctataaacgatggtccaggatgtttgatgttgagatgtcctg 733 |||| ||||||||||| | || |||||||||| ||||| |||||| |||||||||||| Sbjct: 20112 gaggatatattggcacttcaatcaacgatggtctgggatgcttgatgctgagatgtcctg 20053 Query: 734 atccatcctgttctgctgctgttggacaagatatggttgat 774 |||| ||||| ||||||| |||| ||||||||| ||||| Sbjct: 20052 atcccgcctgtgctgctgccgttgatcaagatatgattgat 20012 Score = 52.0 bits (26), Expect = 0.009 Identities = 116/146 (79%) Strand = Plus / Minus Query: 949 tggaattgcacggaggaagctcatcgccctgtagattgttccacagtttccaaatggatt 1008 ||||||||||| || || ||||| || || || ||||| |||||| || || |||||| Sbjct: 4542 tggaattgcactgaagatgctcaccgtccagtggattgcgacacagtgtcgaagtggatt 4483 Query: 1009 ctcaagaatagtgcggaatccgagaatatgaactggatactagctaattcgaagccttgt 1068 | || || ||||| ||||| || |||| || ||||||||| ||| | ||||||| ||| Sbjct: 4482 ttgaaaaacagtgcagaatctgaaaatacgacctggatacttgcttacacgaagccgtgt 4423 Query: 1069 cccaagtgcaagcggcctattgaaaa 1094 |||||||||||| | || |||||||| Sbjct: 4422 cccaagtgcaagagaccaattgaaaa 4397 Score = 48.1 bits (24), Expect = 0.15 Identities = 105/132 (79%) Strand = Plus / Minus Query: 949 tggaattgcacggaggaagctcatcgccctgtagattgttccacagtttccaaatggatt 1008 ||||||||||| || || ||||| || || || ||||| |||||| || || |||||| Sbjct: 19402 tggaattgcactgaagatgctcaccgtccagtggattgcgacacagtgtcgaagtggatt 19343 Query: 1009 ctcaagaatagtgcggaatccgagaatatgaactggatactagctaattcgaagccttgt 1068 | || || ||||| ||||| || || | |||||||||||| ||| | ||||||| ||| Sbjct: 19342 ttgaaaaacagtgcagaatctgaaaacacgaactggatacttgcttacacgaagccgtgt 19283 Query: 1069 cccaagtgcaag 1080 |||||||||||| Sbjct: 19282 cccaagtgcaag 19271 Score = 42.1 bits (21), Expect = 9.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 793 gataaggggaagtatgaacgatatctttgcagatcttacattgaa 837 ||||||| ||||||||| || |||||| ||||||||||||||| Sbjct: 4872 gataaggagaagtatgatcgttatcttgttagatcttacattgaa 4828
>ref|NM_001068917.1| Oryza sativa (japonica cultivar-group) Os08g0540300 (Os08g0540300) mRNA, complete cds Length = 2482 Score = 109 bits (55), Expect = 5e-20 Identities = 220/275 (80%) Strand = Plus / Plus Query: 946 tgttggaattgcacggaggaagctcatcgccctgtagattgttccacagtttccaaatgg 1005 |||||||| |||||||||||||||||||| || || | ||| || ||||| | ||| Sbjct: 980 tgttggaactgcacggaggaagctcatcgaccagtgaactgtgagactgtttctaggtgg 1039 Query: 1006 attctcaagaatagtgcggaatccgagaatatgaactggatactagctaattcgaagcct 1065 || | |||||||| || ||||| || ||||||||||||||||| |||||||| ||||| Sbjct: 1040 atattaaagaatagcgcagaatctgaaaatatgaactggatactggctaattctaagccg 1099 Query: 1066 tgtcccaagtgcaagcggcctattgaaaagaatcagggctgcatgcacattacctgcaca 1125 || || || ||||| || || || || || || ||||| |||||||| || || ||||| Sbjct: 1100 tgcccaaaatgcaaacgaccaatagagaaaaaccagggatgcatgcatatgacttgcact 1159 Query: 1126 ccgccatgtaaatttgaattctgctggctttgtcttggtccatggtcagatcacggggag 1185 || || || |||||||| ||||||||| | ||||| ||| ||||| | || || |||||| Sbjct: 1160 ccaccttgcaaatttgagttctgctggttatgtctgggttcatgggctgaacatggggag 1219 Query: 1186 aggacaggtggtttttatgcttgtaatcgttatga 1220 || || ||||| ||||| ||||||||||| ||||| Sbjct: 1220 agaactggtggattttacgcttgtaatcgctatga 1254 Score = 65.9 bits (33), Expect = 6e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 1426 aagttcataattgaagcatggttacagattgttgaatgtaggcgggtattgaagtggact 1485 ||||||||||||||||| |||| ||||||| ||||||| ||||||||| | || ||||| Sbjct: 1460 aagttcataattgaagcttggtcacagattattgaatgcaggcgggtactcaaatggaca 1519 Query: 1486 tacgcatatggttatta 1502 || || ||||| ||||| Sbjct: 1520 tatgcttatggctatta 1536 Score = 42.1 bits (21), Expect = 9.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 700 gatggtccaggatgtttgatgttgagatgtcctgatccatc 740 |||||||||||||||||| ||| |||| ||||||||||| Sbjct: 737 gatggtccaggatgtttgtcattgcgatgccctgatccatc 777 Score = 42.1 bits (21), Expect = 9.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 1549 caaggtgaagcagaatctggtttggaacgccttcatcagtgtgcggagaaaga 1601 ||||||||||| || |||||| |||| || ||||| || ||||| |||||||| Sbjct: 1577 caaggtgaagctgagtctggtctggagcgtcttcaccaatgtgctgagaaaga 1629
>dbj|AK101429.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033038J15, full insert sequence Length = 2486 Score = 109 bits (55), Expect = 5e-20 Identities = 220/275 (80%) Strand = Plus / Plus Query: 946 tgttggaattgcacggaggaagctcatcgccctgtagattgttccacagtttccaaatgg 1005 |||||||| |||||||||||||||||||| || || | ||| || ||||| | ||| Sbjct: 982 tgttggaactgcacggaggaagctcatcgaccagtgaactgtgagactgtttctaggtgg 1041 Query: 1006 attctcaagaatagtgcggaatccgagaatatgaactggatactagctaattcgaagcct 1065 || | |||||||| || ||||| || ||||||||||||||||| |||||||| ||||| Sbjct: 1042 atattaaagaatagcgcagaatctgaaaatatgaactggatactggctaattctaagccg 1101 Query: 1066 tgtcccaagtgcaagcggcctattgaaaagaatcagggctgcatgcacattacctgcaca 1125 || || || ||||| || || || || || || ||||| |||||||| || || ||||| Sbjct: 1102 tgcccaaaatgcaaacgaccaatagagaaaaaccagggatgcatgcatatgacttgcact 1161 Query: 1126 ccgccatgtaaatttgaattctgctggctttgtcttggtccatggtcagatcacggggag 1185 || || || |||||||| ||||||||| | ||||| ||| ||||| | || || |||||| Sbjct: 1162 ccaccttgcaaatttgagttctgctggttatgtctgggttcatgggctgaacatggggag 1221 Query: 1186 aggacaggtggtttttatgcttgtaatcgttatga 1220 || || ||||| ||||| ||||||||||| ||||| Sbjct: 1222 agaactggtggattttacgcttgtaatcgctatga 1256 Score = 65.9 bits (33), Expect = 6e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 1426 aagttcataattgaagcatggttacagattgttgaatgtaggcgggtattgaagtggact 1485 ||||||||||||||||| |||| ||||||| ||||||| ||||||||| | || ||||| Sbjct: 1462 aagttcataattgaagcttggtcacagattattgaatgcaggcgggtactcaaatggaca 1521 Query: 1486 tacgcatatggttatta 1502 || || ||||| ||||| Sbjct: 1522 tatgcttatggctatta 1538 Score = 42.1 bits (21), Expect = 9.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 700 gatggtccaggatgtttgatgttgagatgtcctgatccatc 740 |||||||||||||||||| ||| |||| ||||||||||| Sbjct: 739 gatggtccaggatgtttgtcattgcgatgccctgatccatc 779 Score = 42.1 bits (21), Expect = 9.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 1549 caaggtgaagcagaatctggtttggaacgccttcatcagtgtgcggagaaaga 1601 ||||||||||| || |||||| |||| || ||||| || ||||| |||||||| Sbjct: 1579 caaggtgaagctgagtctggtctggagcgtcttcaccaatgtgctgagaaaga 1631
>ref|NM_001059708.1| Oryza sativa (japonica cultivar-group) Os04g0491900 (Os04g0491900) mRNA, complete cds Length = 219 Score = 107 bits (54), Expect = 2e-19 Identities = 87/98 (88%) Strand = Plus / Plus Query: 226 gactccgccgacgaggacttctacagcggcggcgaggcgggcctcgccctcagcgacgac 285 |||||||||||||| ||||||||||||||||| ||||| || |||| | ||||||||| Sbjct: 34 gactccgccgacgacgacttctacagcggcggggaggccgggctcggcgggagcgacgac 93 Query: 286 ggggacgcggactacgacttcgcggaccgcgactccga 323 |||||||| |||||||||||||| |||| ||||||||| Sbjct: 94 ggggacgccgactacgacttcgccgaccacgactccga 131
>gb|AC009999.2|T20M3 Sequence of BAC T20M3 from Arabidopsis thaliana chromosome 1, complete sequence Length = 79554 Score = 103 bits (52), Expect = 3e-18 Identities = 88/100 (88%) Strand = Plus / Plus Query: 1043 ggatactagctaattcgaagccttgtcccaagtgcaagcggcctattgaaaagaatcagg 1102 ||||||| || ||||| ||||||||||| ||||| |||||||| |||||||||||||| | Sbjct: 60691 ggatacttgccaattcaaagccttgtccaaagtgtaagcggccaattgaaaagaatcatg 60750 Query: 1103 gctgcatgcacattacctgcacaccgccatgtaaatttga 1142 |||| |||||||| || |||||||| || ||||||||||| Sbjct: 60751 gctgtatgcacatgacatgcacaccaccttgtaaatttga 60790
>emb|AJ510208.1|ATH510208 Arabidopsis thaliana ari5 gene for ARIADNE-like protein ARI5, exons 1-15 Length = 4536 Score = 103 bits (52), Expect = 3e-18 Identities = 88/100 (88%) Strand = Plus / Plus Query: 1043 ggatactagctaattcgaagccttgtcccaagtgcaagcggcctattgaaaagaatcagg 1102 ||||||| || ||||| ||||||||||| ||||| |||||||| |||||||||||||| | Sbjct: 2560 ggatacttgccaattcaaagccttgtccaaagtgtaagcggccaattgaaaagaatcatg 2619 Query: 1103 gctgcatgcacattacctgcacaccgccatgtaaatttga 1142 |||| |||||||| || |||||||| || ||||||||||| Sbjct: 2620 gctgtatgcacatgacatgcacaccaccttgtaaatttga 2659
>gb|AC126012.22| Medicago truncatula clone mth2-27p4, complete sequence Length = 108900 Score = 101 bits (51), Expect = 1e-17 Identities = 183/227 (80%) Strand = Plus / Plus Query: 949 tggaattgcacggaggaagctcatcgccctgtagattgttccacagtttccaaatggatt 1008 ||||||||||| || || ||||| || || || |||||| |||||| || || |||||| Sbjct: 103310 tggaattgcactgaagatgctcaccgtccagtggattgtggcacagtgtcgaagtggatt 103369 Query: 1009 ctcaagaatagtgcggaatccgagaatatgaactggatactagctaattcgaagccttgt 1068 | || || ||| | |||||||| || | |||||||||||| ||||| |||||||| ||| Sbjct: 103370 ttgaaaaacagttcagaatccgaaaacacgaactggatacttgctaactcgaagccgtgt 103429 Query: 1069 cccaagtgcaagcggcctattgaaaagaatcagggctgcatgcacattacctgcacaccg 1128 |||||||||||| | || |||||||| || | || |||||||| || || || || || Sbjct: 103430 cccaagtgcaagagaccaattgaaaaaaacctagggtgcatgcatatgacttgtactcca 103489 Query: 1129 ccatgtaaatttgaattctgctggctttgtcttggtccatggtcaga 1175 || || ||||||||||| |||||||| || |||||| |||||||||| Sbjct: 103490 ccttgcaaatttgaattttgctggctatgccttggtgcatggtcaga 103536 Score = 95.6 bits (48), Expect = 7e-16 Identities = 150/184 (81%) Strand = Plus / Plus Query: 1421 agcttaagttcataattgaagcatggttacagattgttgaatgtaggcgggtattgaagt 1480 ||||||||||||||| || || |||||||| || ||||| || |||||||||||||||| Sbjct: 103782 agcttaagttcataaccgaggcttggttacaaatagttgagtgcaggcgggtattgaagt 103841 Query: 1481 ggacttacgcatatggttattaccttccagaccatgaacatgccaaaaggcagttcttcg 1540 |||| || |||||||| || || | |||| ||||| ||||| |||| ||||||||| | Sbjct: 103842 ggacatatgcatatggatactatttagcagagcatgagcatgctaaaaagcagttctttg 103901 Query: 1541 aatacgttcaaggtgaagcagaatctggtttggaacgccttcatcagtgtgcggagaaag 1600 | ||| | |||||||| |||||||| ||||||| | |||||||| || ||||| || | Sbjct: 103902 agtacttgcaaggtgaggcagaatcaagtttggagagacttcatcaatgcgcggaaaagg 103961 Query: 1601 aact 1604 |||| Sbjct: 103962 aact 103965 Score = 46.1 bits (23), Expect = 0.57 Identities = 50/59 (84%) Strand = Plus / Plus Query: 1261 agaagagaaatggcaaagaactccctcgagagatatacacattactacgagcgatgggc 1319 |||||||||||||||||||| | | ||||| ||||||||||| || ||||| ||||| Sbjct: 103622 agaagagaaatggcaaagaatttattggagaggtatacacattattatgagcggtgggc 103680
>gb|AC011622.6|AC011622 Arabidopsis thaliana chromosome 1 BAC F24D7 genomic sequence, complete sequence Length = 87575 Score = 99.6 bits (50), Expect = 4e-17 Identities = 158/194 (81%) Strand = Plus / Minus Query: 949 tggaattgcacggaggaagctcatcgccctgtagattgttccacagtttccaaatggatt 1008 |||||||||| || || ||||| || ||||| |||||| ||||||| |||||||| Sbjct: 12311 tggaattgcagtgaagaggctcaccgtcctgtggattgtgacacagttggaaaatggata 12252 Query: 1009 ctcaagaatagtgcggaatccgagaatatgaactggatactagctaattcgaagccttgt 1068 || ||||| || | ||||| || |||||||| |||||||| || ||||||||||||||| Sbjct: 12251 ctaaagaacagcactgaatctgaaaatatgaattggatacttgccaattcgaagccttgt 12192 Query: 1069 cccaagtgcaagcggcctattgaaaagaatcagggctgcatgcacattacctgcacaccg 1128 || ||||| ||| |||| || ||||||||||| || || |||||||| || |||||||| Sbjct: 12191 ccaaagtgtaagaggccaatagaaaagaatcatggatgtatgcacatgacatgcacacca 12132 Query: 1129 ccatgtaaatttga 1142 || ||||| ||||| Sbjct: 12131 ccttgtaagtttga 12118 Score = 46.1 bits (23), Expect = 0.57 Identities = 89/111 (80%) Strand = Plus / Minus Query: 1253 ctgaaaggagaagagaaatggcaaagaactccctcgagagatatacacattactacgagc 1312 |||||||||| |||| |||||||| ||||| || |||| ||| || |||||||| | | Sbjct: 12007 ctgaaaggaggcgagagatggcaaaaaactcgctagagaaatacactcattactataaac 11948 Query: 1313 gatgggcagccaatcagtcatcgaggcaaaaggcgcttggggatctgcaga 1363 |||||||| |||||| ||||||||||| || | ||||||||||||| Sbjct: 11947 gatgggcaagcaatcaagtgtcgaggcaaaaagctatgggggatctgcaga 11897
>emb|AJ510209.1|ATH510209 Arabidopsis thaliana partial ari6 pseudogene, exon 1 Length = 1897 Score = 99.6 bits (50), Expect = 4e-17 Identities = 158/194 (81%) Strand = Plus / Plus Query: 949 tggaattgcacggaggaagctcatcgccctgtagattgttccacagtttccaaatggatt 1008 |||||||||| || || ||||| || ||||| |||||| ||||||| |||||||| Sbjct: 754 tggaattgcagtgaagaggctcaccgtcctgtggattgtgacacagttggaaaatggata 813 Query: 1009 ctcaagaatagtgcggaatccgagaatatgaactggatactagctaattcgaagccttgt 1068 || ||||| || | ||||| || |||||||| |||||||| || ||||||||||||||| Sbjct: 814 ctaaagaacagcactgaatctgaaaatatgaattggatacttgccaattcgaagccttgt 873 Query: 1069 cccaagtgcaagcggcctattgaaaagaatcagggctgcatgcacattacctgcacaccg 1128 || ||||| ||| |||| || ||||||||||| || || |||||||| || |||||||| Sbjct: 874 ccaaagtgtaagaggccaatagaaaagaatcatggatgtatgcacatgacatgcacacca 933 Query: 1129 ccatgtaaatttga 1142 || ||||| ||||| Sbjct: 934 ccttgtaagtttga 947 Score = 46.1 bits (23), Expect = 0.57 Identities = 89/111 (80%) Strand = Plus / Plus Query: 1253 ctgaaaggagaagagaaatggcaaagaactccctcgagagatatacacattactacgagc 1312 |||||||||| |||| |||||||| ||||| || |||| ||| || |||||||| | | Sbjct: 1058 ctgaaaggaggcgagagatggcaaaaaactcgctagagaaatacactcattactataaac 1117 Query: 1313 gatgggcagccaatcagtcatcgaggcaaaaggcgcttggggatctgcaga 1363 |||||||| |||||| ||||||||||| || | ||||||||||||| Sbjct: 1118 gatgggcaagcaatcaagtgtcgaggcaaaaagctatgggggatctgcaga 1168
>gb|BT016202.1| Zea mays clone Contig35 mRNA sequence Length = 1266 Score = 97.6 bits (49), Expect = 2e-16 Identities = 94/109 (86%) Strand = Plus / Plus Query: 1132 tgtaaatttgaattctgctggctttgtcttggtccatggtcagatcacggggagaggaca 1191 |||||||| ||||| |||||| | ||||| ||| ||||||||||||| || ||||| ||| Sbjct: 28 tgtaaattcgaattttgctggttatgtctgggtgcatggtcagatcatggagagagaaca 87 Query: 1192 ggtggtttttatgcttgtaatcgttatgaggcagcaaggcaagagggag 1240 ||||| ||||||||||| ||||||||||| |||||| | ||||||||| Sbjct: 88 ggtggcttttatgcttgcaatcgttatgaatcagcaaagaaagagggag 136 Score = 58.0 bits (29), Expect = 2e-04 Identities = 56/65 (86%) Strand = Plus / Plus Query: 1420 cagcttaagttcataattgaagcatggttacagattgttgaatgtaggcgggtattgaag 1479 ||||||||||||||||| ||||| |||| ||||||| | ||||| ||||| || ||||| Sbjct: 316 cagcttaagttcataatcgaagcttggtcacagattatagaatgcaggcgagtgttgaaa 375 Query: 1480 tggac 1484 ||||| Sbjct: 376 tggac 380 Score = 58.0 bits (29), Expect = 2e-04 Identities = 47/53 (88%) Strand = Plus / Plus Query: 1549 caaggtgaagcagaatctggtttggaacgccttcatcagtgtgcggagaaaga 1601 |||||||| || || ||||||||||||||||| |||||||| || |||||||| Sbjct: 439 caaggtgaggctgagtctggtttggaacgcctgcatcagtgcgctgagaaaga 491
>gb|AC007071.7| Arabidopsis thaliana chromosome 2 clone T9H9 map nga361, complete sequence Length = 79734 Score = 85.7 bits (43), Expect = 7e-13 Identities = 88/103 (85%) Strand = Plus / Minus Query: 1043 ggatactagctaattcgaagccttgtcccaagtgcaagcggcctattgaaaagaatcagg 1102 ||||||| || ||||| ||||||||||| | || ||| |||| |||||||||||||||| Sbjct: 7674 ggatacttgccaattcaaagccttgtccgagatgtaagaggccaattgaaaagaatcagg 7615 Query: 1103 gctgcatgcacattacctgcacaccgccatgtaaatttgaatt 1145 |||| |||||||| || || |||||||| ||||||| |||||| Sbjct: 7614 gctgtatgcacatgacatgtacaccgccttgtaaatatgaatt 7572 Score = 71.9 bits (36), Expect = 1e-08 Identities = 63/72 (87%) Strand = Plus / Minus Query: 1151 ggctttgtcttggtccatggtcagatcacggggagaggacaggtggtttttatgcttgta 1210 |||| ||||||||| ||||| ||||||||||| || || ||||||||||||||||||| Sbjct: 7448 ggctatgtcttggtgcatggatggatcacggggaaagaactggtggtttttatgcttgta 7389 Query: 1211 atcgttatgagg 1222 | |||||||||| Sbjct: 7388 accgttatgagg 7377 Score = 67.9 bits (34), Expect = 2e-07 Identities = 64/74 (86%) Strand = Plus / Minus Query: 700 gatggtccaggatgtttgatgttgagatgtcctgatccatcctgttctgctgctgttgga 759 ||||| || |||||||||||| | ||||||||||| ||||| ||| |||||||||||| Sbjct: 8633 gatggcccgggatgtttgatgctaagatgtcctgacccatcttgtcttgctgctgttggt 8574 Query: 760 caagatatggttga 773 || ||||||||||| Sbjct: 8573 catgatatggttga 8560 Score = 65.9 bits (33), Expect = 6e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 1459 gaatgtaggcgggtattgaagtggacttacgcatatggttattaccttccagaccatgaa 1518 ||||||||||| || ||||| |||||||| |||||||| || ||||| || || |||||| Sbjct: 6530 gaatgtaggcgagtcttgaaatggacttatgcatatggatactacctacctgagcatgaa 6471 Query: 1519 catgccaaa 1527 ||||||||| Sbjct: 6470 catgccaaa 6462 Score = 52.0 bits (26), Expect = 0.009 Identities = 44/50 (88%) Strand = Plus / Minus Query: 1630 ccatctaaagatttcaatgacttccgtacaaaattggctggattgaccag 1679 ||||| |||||||||||||| ||||| |||||| | ||||| |||||||| Sbjct: 6278 ccatcaaaagatttcaatgatttccggacaaaactagctggtttgaccag 6229 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 499 catgatgagtggtttgttgatgaag 523 |||||||||||||||| |||||||| Sbjct: 9187 catgatgagtggtttgctgatgaag 9163
>emb|AJ510210.1|ATH510210 Arabidopsis thaliana ari7 gene for ARIADNE-like protein ARI7, exons 1-15 Length = 4180 Score = 85.7 bits (43), Expect = 7e-13 Identities = 88/103 (85%) Strand = Plus / Plus Query: 1043 ggatactagctaattcgaagccttgtcccaagtgcaagcggcctattgaaaagaatcagg 1102 ||||||| || ||||| ||||||||||| | || ||| |||| |||||||||||||||| Sbjct: 2241 ggatacttgccaattcaaagccttgtccgagatgtaagaggccaattgaaaagaatcagg 2300 Query: 1103 gctgcatgcacattacctgcacaccgccatgtaaatttgaatt 1145 |||| |||||||| || || |||||||| ||||||| |||||| Sbjct: 2301 gctgtatgcacatgacatgtacaccgccttgtaaatatgaatt 2343 Score = 71.9 bits (36), Expect = 1e-08 Identities = 63/72 (87%) Strand = Plus / Plus Query: 1151 ggctttgtcttggtccatggtcagatcacggggagaggacaggtggtttttatgcttgta 1210 |||| ||||||||| ||||| ||||||||||| || || ||||||||||||||||||| Sbjct: 2467 ggctatgtcttggtgcatggatggatcacggggaaagaactggtggtttttatgcttgta 2526 Query: 1211 atcgttatgagg 1222 | |||||||||| Sbjct: 2527 accgttatgagg 2538 Score = 67.9 bits (34), Expect = 2e-07 Identities = 64/74 (86%) Strand = Plus / Plus Query: 700 gatggtccaggatgtttgatgttgagatgtcctgatccatcctgttctgctgctgttgga 759 ||||| || |||||||||||| | ||||||||||| ||||| ||| |||||||||||| Sbjct: 1282 gatggcccgggatgtttgatgctaagatgtcctgacccatcttgtcttgctgctgttggt 1341 Query: 760 caagatatggttga 773 || ||||||||||| Sbjct: 1342 catgatatggttga 1355 Score = 65.9 bits (33), Expect = 6e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 1459 gaatgtaggcgggtattgaagtggacttacgcatatggttattaccttccagaccatgaa 1518 ||||||||||| || ||||| |||||||| |||||||| || ||||| || || |||||| Sbjct: 3385 gaatgtaggcgagtcttgaaatggacttatgcatatggatactacctacctgagcatgaa 3444 Query: 1519 catgccaaa 1527 ||||||||| Sbjct: 3445 catgccaaa 3453 Score = 52.0 bits (26), Expect = 0.009 Identities = 44/50 (88%) Strand = Plus / Plus Query: 1630 ccatctaaagatttcaatgacttccgtacaaaattggctggattgaccag 1679 ||||| |||||||||||||| ||||| |||||| | ||||| |||||||| Sbjct: 3637 ccatcaaaagatttcaatgatttccggacaaaactagctggtttgaccag 3686 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 499 catgatgagtggtttgttgatgaag 523 |||||||||||||||| |||||||| Sbjct: 728 catgatgagtggtttgctgatgaag 752
>gb|AC189433.1| Brassica rapa subsp. pekinensis clone KBrB068H20, complete sequence Length = 143250 Score = 83.8 bits (42), Expect = 3e-12 Identities = 90/106 (84%) Strand = Plus / Minus Query: 1043 ggatactagctaattcgaagccttgtcccaagtgcaagcggcctattgaaaagaatcagg 1102 ||||||| || ||||| ||||| ||||| | ||||||||||| |||||||| ||||||| Sbjct: 90364 ggatacttgccaattcaaagccctgtccaagttgcaagcggccaattgaaaaaaatcagg 90305 Query: 1103 gctgcatgcacattacctgcacaccgccatgtaaatttgaattctg 1148 | || ||||| || || ||||||||||| ||||||| ||||||||| Sbjct: 90304 ggtgtatgcatatgacatgcacaccgccttgtaaatatgaattctg 90259 Score = 63.9 bits (32), Expect = 2e-06 Identities = 47/52 (90%) Strand = Plus / Minus Query: 1628 gcccatctaaagatttcaatgacttccgtacaaaattggctggattgaccag 1679 |||||||||||||||||||||| ||||| |||||| | ||||| |||||||| Sbjct: 88852 gcccatctaaagatttcaatgatttccggacaaaactagctggtttgaccag 88801 Score = 60.0 bits (30), Expect = 4e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 700 gatggtccaggatgtttgatgttgagatgtcctgatccatcctgttctgctgctgttgga 759 ||||| || |||||||||||| | ||||||||||| || || |||| ||||||||||| Sbjct: 91138 gatggcccgggatgtttgatgctaagatgtcctgacccttcttgtttagctgctgttggt 91079 Query: 760 caagatatggttga 773 || ||||||||||| Sbjct: 91078 catgatatggttga 91065 Score = 50.1 bits (25), Expect = 0.037 Identities = 52/61 (85%) Strand = Plus / Minus Query: 1151 ggctttgtcttggtccatggtcagatcacggggagaggacaggtggtttttatgcttgta 1210 |||||||||||||| ||||| ||||| ||||| || || ||||| ||||||||||||| Sbjct: 90115 ggctttgtcttggtgcatggatggatcatggggaaagaactggtgggttttatgcttgta 90056 Query: 1211 a 1211 | Sbjct: 90055 a 90055 Score = 48.1 bits (24), Expect = 0.15 Identities = 57/68 (83%) Strand = Plus / Minus Query: 1459 gaatgtaggcgggtattgaagtggacttacgcatatggttattaccttccagaccatgaa 1518 ||||||||| | || ||||| ||||| || |||||||| || ||||| || || |||||| Sbjct: 89109 gaatgtaggagagtcttgaaatggacatatgcatatggatactacctacctgatcatgaa 89050 Query: 1519 catgccaa 1526 |||||||| Sbjct: 89049 catgccaa 89042
>gb|AY484589.1| Musa acuminata clone MuH9, genomic sequence Length = 82723 Score = 75.8 bits (38), Expect = 6e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 1043 ggatactagctaattcgaagccttgtcccaagtgcaagcggcctattgaaaagaatcagg 1102 |||||||||| || || ||||||||||| |||||||| || || ||||| || || |||| Sbjct: 30704 ggatactagcaaactcaaagccttgtccaaagtgcaaacgtccaattgagaaaaaccagg 30763 Query: 1103 gctgcatgcacattacctgcacaccgccatgtaaatttgaattctgctgg 1152 | |||||||| || || |||||||| || ||||||||||| || |||||| Sbjct: 30764 gatgcatgcatataacatgcacacctccttgtaaatttgagttttgctgg 30813 Score = 75.8 bits (38), Expect = 6e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 1475 tgaagtggacttacgcatatggttattaccttccagaccatgaacatgccaaaaggcagt 1534 |||||||||| || || |||||||||||||||||||| ||||||||| |||| || |||| Sbjct: 32567 tgaagtggacatatgcctatggttattaccttccagagcatgaacattccaagagacagt 32626 Query: 1535 tcttcgaata 1544 |||| ||||| Sbjct: 32627 tctttgaata 32636 Score = 73.8 bits (37), Expect = 3e-09 Identities = 64/73 (87%) Strand = Plus / Plus Query: 1156 tgtcttggtccatggtcagatcacggggagaggacaggtggtttttatgcttgtaatcgt 1215 |||||||| |||||||||| ||||| |||||||| |||||||| |||||||||||||| Sbjct: 30900 tgtcttggatcatggtcagagcacggtgagaggactggtggtttctatgcttgtaatcgc 30959 Query: 1216 tatgaggcagcaa 1228 || || ||||||| Sbjct: 30960 tacgaagcagcaa 30972 Score = 60.0 bits (30), Expect = 4e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 1379 agcttgaaaaactaagtgacatacaaagccaacctgagtcacagcttaagttcataattg 1438 ||||||| || |||||||| | ||||| |||||||| || ||||| ||||||||||| | Sbjct: 32356 agcttgagaagctaagtgataggcaaagtcaacctgaatcccagctcaagttcataatag 32415 Query: 1439 aagcatggttacag 1452 |||| ||||||||| Sbjct: 32416 aagcctggttacag 32429 Score = 58.0 bits (29), Expect = 2e-04 Identities = 65/77 (84%) Strand = Plus / Plus Query: 1252 tctgaaaggagaagagaaatggcaaagaactccctcgagagatatacacattactacgag 1311 ||||||||||| ||||||||||| || || || || |||||||| |||||||| || ||| Sbjct: 31097 tctgaaaggaggagagaaatggctaaaaattctcttgagagatacacacattattatgag 31156 Query: 1312 cgatgggcagccaatca 1328 || ||||| ||||||| Sbjct: 31157 cgctgggctaccaatca 31173 Score = 56.0 bits (28), Expect = 6e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 1551 aggtgaagcagaatctggtttggaacgccttcatcagtgtgcggagaa 1598 |||||| || || ||||||||||||||||||||||| ||||| ||||| Sbjct: 32719 aggtgaggctgagtctggtttggaacgccttcatcaatgtgcagagaa 32766 Score = 46.1 bits (23), Expect = 0.57 Identities = 104/131 (79%) Strand = Plus / Plus Query: 718 atgttgagatgtcctgatccatcctgttctgctgctgttggacaagatatggttgattta 777 ||||||||||| |||||||| || ||| |||||||||||| ||| | || ||||| || Sbjct: 27827 atgttgagatgccctgatccttcttgtagtgctgctgttggtcaaaacatagttgagcta 27886 Query: 778 ttcgccagtgaggaggataaggggaagtatgaacgatatctttgcagatcttacattgaa 837 || || | ||| || ||||| | |||||| ||| |||||| |||||||| ||||| Sbjct: 27887 ttggctactgatgaagataaagagaagtactcacgttatcttcttagatcttatgttgaa 27946 Query: 838 gataatagaaa 848 ||||||||||| Sbjct: 27947 gataatagaaa 27957
>gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0028C22, complete sequence Length = 154228 Score = 67.9 bits (34), Expect = 2e-07 Identities = 91/110 (82%) Strand = Plus / Plus Query: 1043 ggatactagctaattcgaagccttgtcccaagtgcaagcggcctattgaaaagaatcagg 1102 ||||| ||||| |||| ||||| ||||| || ||||| || ||||| || |||||||||| Sbjct: 36059 ggatattagcttattctaagccctgtccgaaatgcaaacgacctatagagaagaatcagg 36118 Query: 1103 gctgcatgcacattacctgcacaccgccatgtaaatttgaattctgctgg 1152 | |||||||| || || ||||| || || ||||||||||| || |||||| Sbjct: 36119 gatgcatgcatatgacatgcactcctccttgtaaatttgagttttgctgg 36168 Score = 50.1 bits (25), Expect = 0.037 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1166 catggtcagatcacggggagaggacaggtggtttttatgcttgtaatcgttat 1218 ||||||||||||| || || |||| ||||| ||||||||||| ||||||||| Sbjct: 36276 catggtcagatcatggagatgggactggtggcttttatgcttgcaatcgttat 36328
>gb|AC150786.21| Medicago truncatula clone mth2-170o9, complete sequence Length = 142649 Score = 67.9 bits (34), Expect = 2e-07 Identities = 91/110 (82%) Strand = Plus / Minus Query: 1043 ggatactagctaattcgaagccttgtcccaagtgcaagcggcctattgaaaagaatcagg 1102 ||||||| ||||| |||||||| ||||||||||||||| | || |||||||| || || | Sbjct: 77242 ggatacttgctaactcgaagccgtgtcccaagtgcaagagaccgattgaaaaaaaccaag 77183 Query: 1103 gctgcatgcacattacctgcacaccgccatgtaaatttgaattctgctgg 1152 | |||||||| || || || || || || || ||||||||||| |||||| Sbjct: 77182 ggtgcatgcatatgacatgtactccaccttgcaaatttgaattttgctgg 77133 Score = 67.9 bits (34), Expect = 2e-07 Identities = 76/90 (84%) Strand = Plus / Minus Query: 679 tatattggcacagctataaacgatggtccaggatgtttgatgttgagatgtcctgatcca 738 ||||||||||| | || ||||||||||| ||||| |||||| |||||||||||||||| Sbjct: 79261 tatattggcacttcaattaacgatggtcctggatgcttgatgctgagatgtcctgatcct 79202 Query: 739 tcctgttctgctgctgttggacaagatatg 768 | ||| ||||||||||| ||||||||| Sbjct: 79201 gcttgtggtgctgctgttgatcaagatatg 79172 Score = 63.9 bits (32), Expect = 2e-06 Identities = 53/60 (88%) Strand = Plus / Minus Query: 1393 agtgacatacaaagccaacctgagtcacagcttaagttcataattgaagcatggttacag 1452 ||||||| |||| |||||||||||||||| ||||||||||||| || || ||||||||| Sbjct: 75352 agtgacacacaatgccaacctgagtcacaacttaagttcataaccgaggcttggttacag 75293 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Minus Query: 1450 cagattgttgaatgtaggcgggtattgaagtggacttacgcatatgg 1496 ||||| ||||| || |||||||||||||||||||| || |||||||| Sbjct: 74606 cagatagttgagtgcaggcgggtattgaagtggacatatgcatatgg 74560 Score = 48.1 bits (24), Expect = 0.15 Identities = 57/68 (83%) Strand = Plus / Minus Query: 1159 cttggtccatggtcagatcacggggagaggacaggtggtttttatgcttgtaatcgttat 1218 |||||| |||||||||| || || || ||||| || ||||| || ||||| ||||||||| Sbjct: 76873 cttggtgcatggtcagaccatggtgaaaggactggcggtttctacgcttgcaatcgttat 76814 Query: 1219 gaggcagc 1226 || ||||| Sbjct: 76813 gaagcagc 76806 Score = 46.1 bits (23), Expect = 0.57 Identities = 50/59 (84%) Strand = Plus / Minus Query: 1261 agaagagaaatggcaaagaactccctcgagagatatacacattactacgagcgatgggc 1319 |||||||||||||||||||| || | ||||| || |||||||| || ||||| ||||| Sbjct: 76650 agaagagaaatggcaaagaattcattggagaggtacacacattattatgagcggtgggc 76592
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 67.9 bits (34), Expect = 2e-07 Identities = 91/110 (82%) Strand = Plus / Plus Query: 1043 ggatactagctaattcgaagccttgtcccaagtgcaagcggcctattgaaaagaatcagg 1102 ||||| ||||| |||| ||||| ||||| || ||||| || ||||| || |||||||||| Sbjct: 19708792 ggatattagcttattctaagccctgtccgaaatgcaaacgacctatagagaagaatcagg 19708851 Query: 1103 gctgcatgcacattacctgcacaccgccatgtaaatttgaattctgctgg 1152 | |||||||| || || ||||| || || ||||||||||| || |||||| Sbjct: 19708852 gatgcatgcatatgacatgcactcctccttgtaaatttgagttttgctgg 19708901 Score = 50.1 bits (25), Expect = 0.037 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1166 catggtcagatcacggggagaggacaggtggtttttatgcttgtaatcgttat 1218 ||||||||||||| || || |||| ||||| ||||||||||| ||||||||| Sbjct: 19709009 catggtcagatcatggagatgggactggtggcttttatgcttgcaatcgttat 19709061
>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0450E05 Length = 176553 Score = 67.9 bits (34), Expect = 2e-07 Identities = 91/110 (82%) Strand = Plus / Plus Query: 1043 ggatactagctaattcgaagccttgtcccaagtgcaagcggcctattgaaaagaatcagg 1102 ||||| ||||| |||| ||||| ||||| || ||||| || ||||| || |||||||||| Sbjct: 54478 ggatattagcttattctaagccctgtccgaaatgcaaacgacctatagagaagaatcagg 54537 Query: 1103 gctgcatgcacattacctgcacaccgccatgtaaatttgaattctgctgg 1152 | |||||||| || || ||||| || || ||||||||||| || |||||| Sbjct: 54538 gatgcatgcatatgacatgcactcctccttgtaaatttgagttttgctgg 54587 Score = 50.1 bits (25), Expect = 0.037 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1166 catggtcagatcacggggagaggacaggtggtttttatgcttgtaatcgttat 1218 ||||||||||||| || || |||| ||||| ||||||||||| ||||||||| Sbjct: 54695 catggtcagatcatggagatgggactggtggcttttatgcttgcaatcgttat 54747
>gb|AF233753.1|AF233753 Arabidopsis thaliana shr-2 mutant gene, complete sequence Length = 2059 Score = 67.9 bits (34), Expect = 2e-07 Identities = 64/74 (86%) Strand = Plus / Plus Query: 700 gatggtccaggatgtttgatgttgagatgtcctgatccatcctgttctgctgctgttgga 759 ||||| || |||||||||||| | ||||||||||| ||||| ||| |||||||||||| Sbjct: 760 gatggcccgggatgtttgatgctaagatgtcctgacccatcttgtcttgctgctgttggt 819 Query: 760 caagatatggttga 773 || ||||||||||| Sbjct: 820 catgatatggttga 833
>gb|AC004512.2|T8F5 Arabidopsis thaliana chromosome 1 BAC T8F5 sequence, complete sequence Length = 88292 Score = 65.9 bits (33), Expect = 6e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 1183 gagaggacaggtggtttttatgcttgtaatcgttatgaggcagcaaggcaaga 1235 |||| ||||||||| |||||||||||||| |||||||| ||||||| |||||| Sbjct: 69815 gagaagacaggtggcttttatgcttgtaaccgttatgaagcagcaaagcaaga 69763 Score = 63.9 bits (32), Expect = 2e-06 Identities = 56/64 (87%) Strand = Plus / Minus Query: 1265 gagaaatggcaaagaactccctcgagagatatacacattactacgagcgatgggcagcca 1324 |||| |||||||||||||| || ||||||||||| || ||||| ||| |||||||| ||| Sbjct: 69636 gagagatggcaaagaactctcttgagagatatacccactactatgagagatgggcaacca 69577 Query: 1325 atca 1328 |||| Sbjct: 69576 atca 69573 Score = 61.9 bits (31), Expect = 1e-05 Identities = 82/99 (82%) Strand = Plus / Minus Query: 1054 aattcgaagccttgtcccaagtgcaagcggcctattgaaaagaatcagggctgcatgcac 1113 ||||| ||||| ||||| || ||||| ||||| || || || || ||||| || ||||| Sbjct: 70240 aattccaagccctgtccaaaatgcaaacggccaatagagaaaaaccagggttgtatgcat 70181 Query: 1114 attacctgcacaccgccatgtaaatttgaattctgctgg 1152 ||||| ||||| || |||||||||||||| ||||||||| Sbjct: 70180 attacgtgcaccccaccatgtaaatttgagttctgctgg 70142 Score = 48.1 bits (24), Expect = 0.15 Identities = 51/60 (85%) Strand = Plus / Minus Query: 1393 agtgacatacaaagccaacctgagtcacagcttaagttcataattgaagcatggttacag 1452 ||||||||||| | || ||||| ||||| || |||||||| || ||||||||||||||| Sbjct: 68513 agtgacatacagtgtcagcctgaatcacaactgaagttcattatagaagcatggttacag 68454 Score = 42.1 bits (21), Expect = 9.0 Identities = 63/77 (81%) Strand = Plus / Minus Query: 964 gaagctcatcgccctgtagattgttccacagtttccaaatggattctcaagaatagtgcg 1023 |||||||| || |||||||||||| ||| ||||| || ||| | | ||||||||||| Sbjct: 70628 gaagctcaccgtcctgtagattgtgacactgtttctaagtgggtattgaagaatagtgct 70569 Query: 1024 gaatccgagaatatgaa 1040 || || ||||||||||| Sbjct: 70568 gagtcggagaatatgaa 70552 Score = 42.1 bits (21), Expect = 9.0 Identities = 45/53 (84%) Strand = Plus / Minus Query: 856 tggtgtcctgctcctggctgcgaatatgctgtggaatttgtcgttggcagtgg 908 |||||||| ||||||||||| || |||||||| | ||||| ||||| ||||| Sbjct: 70841 tggtgtcccgctcctggctgtgactatgctgtaaattttgttgttggaagtgg 70789
>emb|AJ510211.1|ATH510211 Arabidopsis thaliana ari8 gene for ARIADNE-like protein ARI8, exons 1-15 Length = 4995 Score = 65.9 bits (33), Expect = 6e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 1183 gagaggacaggtggtttttatgcttgtaatcgttatgaggcagcaaggcaaga 1235 |||| ||||||||| |||||||||||||| |||||||| ||||||| |||||| Sbjct: 2407 gagaagacaggtggcttttatgcttgtaaccgttatgaagcagcaaagcaaga 2459 Score = 63.9 bits (32), Expect = 2e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 1265 gagaaatggcaaagaactccctcgagagatatacacattactacgagcgatgggcagcca 1324 |||| |||||||||||||| || ||||||||||| || ||||| ||| |||||||| ||| Sbjct: 2586 gagagatggcaaagaactctcttgagagatatacccactactatgagagatgggcaacca 2645 Query: 1325 atca 1328 |||| Sbjct: 2646 atca 2649 Score = 61.9 bits (31), Expect = 1e-05 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1054 aattcgaagccttgtcccaagtgcaagcggcctattgaaaagaatcagggctgcatgcac 1113 ||||| ||||| ||||| || ||||| ||||| || || || || ||||| || ||||| Sbjct: 1982 aattccaagccctgtccaaaatgcaaacggccaatagagaaaaaccagggttgtatgcat 2041 Query: 1114 attacctgcacaccgccatgtaaatttgaattctgctgg 1152 ||||| ||||| || |||||||||||||| ||||||||| Sbjct: 2042 attacgtgcaccccaccatgtaaatttgagttctgctgg 2080 Score = 48.1 bits (24), Expect = 0.15 Identities = 51/60 (85%) Strand = Plus / Plus Query: 1393 agtgacatacaaagccaacctgagtcacagcttaagttcataattgaagcatggttacag 1452 ||||||||||| | || ||||| ||||| || |||||||| || ||||||||||||||| Sbjct: 3709 agtgacatacagtgtcagcctgaatcacaactgaagttcattatagaagcatggttacag 3768 Score = 42.1 bits (21), Expect = 9.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 856 tggtgtcctgctcctggctgcgaatatgctgtggaatttgtcgttggcagtgg 908 |||||||| ||||||||||| || |||||||| | ||||| ||||| ||||| Sbjct: 1381 tggtgtcccgctcctggctgtgactatgctgtaaattttgttgttggaagtgg 1433 Score = 42.1 bits (21), Expect = 9.0 Identities = 63/77 (81%) Strand = Plus / Plus Query: 964 gaagctcatcgccctgtagattgttccacagtttccaaatggattctcaagaatagtgcg 1023 |||||||| || |||||||||||| ||| ||||| || ||| | | ||||||||||| Sbjct: 1594 gaagctcaccgtcctgtagattgtgacactgtttctaagtgggtattgaagaatagtgct 1653 Query: 1024 gaatccgagaatatgaa 1040 || || ||||||||||| Sbjct: 1654 gagtcggagaatatgaa 1670
>gb|AC189443.1| Brassica rapa subsp. pekinensis clone KBrB070J11, complete sequence Length = 146304 Score = 63.9 bits (32), Expect = 2e-06 Identities = 44/48 (91%) Strand = Plus / Minus Query: 1188 gacaggtggtttttatgcttgtaatcgttatgaggcagcaaggcaaga 1235 ||||||||| |||||||||||||| |||||||| ||||||| |||||| Sbjct: 79633 gacaggtggcttttatgcttgtaaccgttatgatgcagcaaagcaaga 79586 Score = 48.1 bits (24), Expect = 0.15 Identities = 78/96 (81%) Strand = Plus / Minus Query: 1057 tcgaagccttgtcccaagtgcaagcggcctattgaaaagaatcagggctgcatgcacatt 1116 |||||||| ||||| || || || ||||| || || ||||| ||||| || ||||| ||| Sbjct: 80064 tcgaagccctgtccaaaatgtaaacggccgatagagaagaaccagggttgtatgcatatt 80005 Query: 1117 acctgcacaccgccatgtaaatttgaattctgctgg 1152 || || || ||||||||||||| ||| || |||||| Sbjct: 80004 acatgtaccccgccatgtaaatatgagttttgctgg 79969 Score = 42.1 bits (21), Expect = 9.0 Identities = 63/77 (81%) Strand = Plus / Minus Query: 964 gaagctcatcgccctgtagattgttccacagtttccaaatggattctcaagaatagtgcg 1023 |||||||| || |||||||||||| ||| || || |||||||| | |||||||| || Sbjct: 80430 gaagctcaccgtcctgtagattgtgacaccgtatctaaatggataatgaagaatagcgct 80371 Query: 1024 gaatccgagaatatgaa 1040 ||||| ||||| ||||| Sbjct: 80370 gaatctgagaacatgaa 80354
>dbj|AB108081.1| Phleum pratense DNA, SSR, microsatellite A01-D05 Length = 548 Score = 60.0 bits (30), Expect = 4e-05 Identities = 66/78 (84%) Strand = Plus / Minus Query: 406 gatgacatgaatcgggtttcaactgttctttcaatttcaaaatcagaagcatgcgccctt 465 |||||||| ||| | ||| ||||||||||||| ||||| || ||||||||||| || || Sbjct: 294 gatgacataaatagagttgcaactgttctttccatttcgaagtcagaagcatgtgctctc 235 Query: 466 cttcgcagttataactgg 483 ||||| || ||||||||| Sbjct: 234 cttcgtagatataactgg 217
>gb|DQ446587.1| Arabidopsis thaliana clone pENTR221-At2g31780 zinc finger family protein (At2g31780) mRNA, complete cds Length = 1603 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 1030 gagaatatgaactggatactagctaattcgaagccttgtcccaagtgcaagcggcctatt 1089 ||||| ||||| |||||||| ||||| | ||||||||||| || |||||||| |||||| Sbjct: 856 gagaacatgaattggatacttgctaagacaaagccttgtcctaaatgcaagcgtcctatt 915 Query: 1090 gaaaagaa 1097 || ||||| Sbjct: 916 gagaagaa 923
>ref|NM_128736.2| Arabidopsis thaliana ubiquitin-protein ligase/ zinc ion binding (AT2G31780) mRNA, complete cds Length = 1614 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 1030 gagaatatgaactggatactagctaattcgaagccttgtcccaagtgcaagcggcctatt 1089 ||||| ||||| |||||||| ||||| | ||||||||||| || |||||||| |||||| Sbjct: 856 gagaacatgaattggatacttgctaagacaaagccttgtcctaaatgcaagcgtcctatt 915 Query: 1090 gaaaagaa 1097 || ||||| Sbjct: 916 gagaagaa 923
>gb|AC006533.8| Arabidopsis thaliana chromosome 2 clone F20M17 map nga361, complete sequence Length = 100665 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 1030 gagaatatgaactggatactagctaattcgaagccttgtcccaagtgcaagcggcctatt 1089 ||||| ||||| |||||||| ||||| | ||||||||||| || |||||||| |||||| Sbjct: 70384 gagaacatgaattggatacttgctaagacaaagccttgtcctaaatgcaagcgtcctatt 70325 Query: 1090 gaaaagaa 1097 || ||||| Sbjct: 70324 gagaagaa 70317 Score = 46.1 bits (23), Expect = 0.57 Identities = 41/47 (87%) Strand = Plus / Minus Query: 1042 tggatactagctaattcgaagccttgtcccaagtgcaagcggcctat 1088 ||||||||||| ||||||||||| ||||| || ||||| || ||||| Sbjct: 77138 tggatactagcgaattcgaagccatgtcctaaatgcaaacgtcctat 77092
>gb|AY105694.1| Zea mays PCO071849 mRNA sequence Length = 547 Score = 56.0 bits (28), Expect = 6e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 1684 actcgcaattattttgaaaacctggtccgtgcattggagtctggattgaatgatgt 1739 ||||||||||||||||||||||| ||||| || |||| ||||||| |||||||| Sbjct: 12 actcgcaattattttgaaaacctcgtccgggctctggaaactggattaaatgatgt 67 Score = 46.1 bits (23), Expect = 0.57 Identities = 83/103 (80%) Strand = Plus / Plus Query: 1859 gctcaacccgtggtatggatgatggcaacatctgggcctgtgatcagtgcacatttgcga 1918 |||||| ||| ||| |||||||| | ||||| ||| | || ||||||||||||| ||| | Sbjct: 181 gctcaagccgaggtgtggatgatagtaacatatggacgtgcgatcagtgcacatatgcaa 240 Query: 1919 accctagatctgctaggagctgccaggtttgtgaccatcagca 1961 |||| | |||||| || |||||||| |||||| || ||||| Sbjct: 241 accccaaatctgccagagcctgccaggcttgtgatcaccagca 283
>emb|AJ510214.1|ATH510214 Arabidopsis thaliana ari11 gene for ARIADNE-like protein ARI11, exons 1-3 Length = 2215 Score = 56.0 bits (28), Expect = 6e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 1030 gagaatatgaactggatactagctaattcgaagccttgtcccaagtgcaagcggcctatt 1089 ||||| ||||| |||||||| ||||| | ||||||||||| || |||||||| |||||| Sbjct: 856 gagaacatgaattggatacttgctaagacaaagccttgtcctaaatgcaagcgtcctatt 915 Query: 1090 gaaaagaa 1097 || ||||| Sbjct: 916 gagaagaa 923
>gb|AC189463.1| Brassica rapa subsp. pekinensis clone KBrB074K06, complete sequence Length = 104458 Score = 48.1 bits (24), Expect = 0.15 Identities = 48/56 (85%) Strand = Plus / Plus Query: 1024 gaatccgagaatatgaactggatactagctaattcgaagccttgtcccaagtgcaa 1079 ||||||||||| | |||||||||||| || ||| | ||||||||||| || ||||| Sbjct: 39624 gaatccgagaacacgaactggatacttgcgaatacaaagccttgtcctaattgcaa 39679
>emb|X79793.1|NTPNLA28 N.tabacum mRNA pNLA-28 Length = 728 Score = 48.1 bits (24), Expect = 0.15 Identities = 84/104 (80%) Strand = Plus / Plus Query: 1489 gcatatggttattaccttccagaccatgaacatgccaaaaggcagttcttcgaatacgtt 1548 |||||||| || ||||| || || ||||| ||||| ||||||||||| || || ||| | Sbjct: 1 gcatatggatactacctacccgaacatgagcatgcaaaaaggcagttttttgagtactta 60 Query: 1549 caaggtgaagcagaatctggtttggaacgccttcatcagtgtgc 1592 |||||||| ||||| ||||||| || | |||||||| ||||| Sbjct: 61 caaggtgaggcagaggctggtttagagaggcttcatcaatgtgc 104
>ref|XM_001015750.1| Tetrahymena thermophila SB210 IBR domain containing protein (TTHERM_00079090) mRNA, complete cds Length = 1482 Score = 46.1 bits (23), Expect = 0.57 Identities = 32/35 (91%) Strand = Plus / Plus Query: 853 aaatggtgtcctgctcctggctgcgaatatgctgt 887 |||||||||||||||||||| ||||| | |||||| Sbjct: 604 aaatggtgtcctgctcctggttgcgattttgctgt 638
>emb|CR855124.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0105P02, complete sequence Length = 98540 Score = 46.1 bits (23), Expect = 0.57 Identities = 23/23 (100%) Strand = Plus / Plus Query: 179 cggtgcgcgaggcggcggcggcg 201 ||||||||||||||||||||||| Sbjct: 63091 cggtgcgcgaggcggcggcggcg 63113
>ref|NM_018833.2| Homo sapiens transporter 2, ATP-binding cassette, sub-family B (MDR/TAP) (TAP2), transcript variant 2, mRNA Length = 2540 Score = 46.1 bits (23), Expect = 0.57 Identities = 26/27 (96%) Strand = Plus / Plus Query: 986 gttccacagtttccaaatggattctca 1012 ||||| ||||||||||||||||||||| Sbjct: 2300 gttcctcagtttccaaatggattctca 2326
>ref|NM_001064902.1| Oryza sativa (japonica cultivar-group) Os06g0679200 (Os06g0679200) mRNA, complete cds Length = 1919 Score = 46.1 bits (23), Expect = 0.57 Identities = 23/23 (100%) Strand = Plus / Plus Query: 184 cgcgaggcggcggcggcgatgga 206 ||||||||||||||||||||||| Sbjct: 1871 cgcgaggcggcggcggcgatgga 1893
>emb|CT025621.2| Gorilla DNA sequence from clone CH255-354J20, complete sequence Length = 194009 Score = 46.1 bits (23), Expect = 0.57 Identities = 26/27 (96%) Strand = Plus / Minus Query: 986 gttccacagtttccaaatggattctca 1012 ||||| ||||||||||||||||||||| Sbjct: 136684 gttcctcagtttccaaatggattctca 136658
>ref|NM_128734.1| Arabidopsis thaliana ubiquitin-protein ligase/ zinc ion binding (AT2G31760) mRNA, complete cds Length = 1545 Score = 46.1 bits (23), Expect = 0.57 Identities = 41/47 (87%) Strand = Plus / Plus Query: 1042 tggatactagctaattcgaagccttgtcccaagtgcaagcggcctat 1088 ||||||||||| ||||||||||| ||||| || ||||| || ||||| Sbjct: 808 tggatactagcgaattcgaagccatgtcctaaatgcaaacgtcctat 854
>gb|DQ056560.1| Arabidopsis thaliana zinc finger protein-related (At2g31760) mRNA, complete cds Length = 1545 Score = 46.1 bits (23), Expect = 0.57 Identities = 41/47 (87%) Strand = Plus / Plus Query: 1042 tggatactagctaattcgaagccttgtcccaagtgcaagcggcctat 1088 ||||||||||| ||||||||||| ||||| || ||||| || ||||| Sbjct: 808 tggatactagcgaattcgaagccatgtcctaaatgcaaacgtcctat 854
>emb|X66401.1|HSMHCAPG H.sapiens genes TAP1, TAP2, LMP2, LMP7 and DOB Length = 66109 Score = 46.1 bits (23), Expect = 0.57 Identities = 26/27 (96%) Strand = Plus / Plus Query: 986 gttccacagtttccaaatggattctca 1012 ||||| ||||||||||||||||||||| Sbjct: 56584 gttcctcagtttccaaatggattctca 56610
>emb|CT009500.4| Human DNA sequence from clone DAMA-353C16 on chromosome 6, complete sequence Length = 14668 Score = 46.1 bits (23), Expect = 0.57 Identities = 26/27 (96%) Strand = Plus / Minus Query: 986 gttccacagtttccaaatggattctca 1012 ||||| ||||||||||||||||||||| Sbjct: 1951 gttcctcagtttccaaatggattctca 1925
>gb|AC148708.1| Macaca mulatta Major Histocompatibility Complex BAC MMU387P10, complete sequence Length = 176807 Score = 46.1 bits (23), Expect = 0.57 Identities = 26/27 (96%) Strand = Plus / Minus Query: 986 gttccacagtttccaaatggattctca 1012 ||||| ||||||||||||||||||||| Sbjct: 39 gttcctcagtttccaaatggattctca 13
>gb|AC148669.1| Macaca mulatta Major Histocompatibility Complex BAC MMU063B15, complete sequence Length = 162392 Score = 46.1 bits (23), Expect = 0.57 Identities = 26/27 (96%) Strand = Plus / Minus Query: 986 gttccacagtttccaaatggattctca 1012 ||||| ||||||||||||||||||||| Sbjct: 96455 gttcctcagtttccaaatggattctca 96429
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 46.1 bits (23), Expect = 0.57 Identities = 23/23 (100%) Strand = Plus / Minus Query: 184 cgcgaggcggcggcggcgatgga 206 ||||||||||||||||||||||| Sbjct: 27880897 cgcgaggcggcggcggcgatgga 27880875 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 ggcggcggcggcgatggattc 209 ||||||||||||||||||||| Sbjct: 26704016 ggcggcggcggcgatggattc 26704036 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 ggcggcggcggcgatggattc 209 ||||||||||||||||||||| Sbjct: 29865346 ggcggcggcggcgatggattc 29865366
>emb|CT009502.2| Human DNA sequence from clone DAMC-27I8 on chromosome 6, complete sequence Length = 35167 Score = 46.1 bits (23), Expect = 0.57 Identities = 26/27 (96%) Strand = Plus / Minus Query: 986 gttccacagtttccaaatggattctca 1012 ||||| ||||||||||||||||||||| Sbjct: 12334 gttcctcagtttccaaatggattctca 12308
>emb|BX682530.4| Human DNA sequence from clone DASS-193J13 on chromosome 6, complete sequence Length = 19936 Score = 46.1 bits (23), Expect = 0.57 Identities = 26/27 (96%) Strand = Plus / Minus Query: 986 gttccacagtttccaaatggattctca 1012 ||||| ||||||||||||||||||||| Sbjct: 946 gttcctcagtttccaaatggattctca 920
>emb|BX296564.7| Human DNA sequence from clone DASS-256O6 on chromosome 6, complete sequence Length = 74846 Score = 46.1 bits (23), Expect = 0.57 Identities = 26/27 (96%) Strand = Plus / Minus Query: 986 gttccacagtttccaaatggattctca 1012 ||||| ||||||||||||||||||||| Sbjct: 73792 gttcctcagtttccaaatggattctca 73766
>emb|AL935043.4| Human DNA sequence from clone DAQB-69D7 on chromosome 6 Contains the TAP2 gene for transporter 2, ATP-binding cassette, sub-family B (MDR/TAP), the PSMB8 gene for proteasome (prosome, macropain) subunit, beta type, 8 (large multifunctional protease 7), the TAP1 gene for transporter 1, ATP-binding cassette, sub-family B (MDR/TAP), the PSMB9 gene for proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional protease 2), the PPP1R2P1 gene for protein phosphatase 2, regulatory (inhibitor) subunit 2 pseudogene 1 and 1 CpG island, complete sequence Length = 63179 Score = 46.1 bits (23), Expect = 0.57 Identities = 26/27 (96%) Strand = Plus / Minus Query: 986 gttccacagtttccaaatggattctca 1012 ||||| ||||||||||||||||||||| Sbjct: 1951 gttcctcagtttccaaatggattctca 1925
>emb|AL669918.5| Human DNA sequence from clone XXbac-246D15 on chromosome 6 contains the HLA-DOB gene for major histocompatibility complex, class II, DO beta, the TAP2 gene for transporter 2, ATP-binding cassette, subfamily B (MDR/TAP), the PSMB8 gene for proteasome (prosome, macropain) subunit, beta type, 8 (large multifunctional protease 7), the TAP1 gene for transporter 1, ATP-binding cassette, sub-family B (MDR/TAP), the PSMB9 gene for proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional protease 2), a novel protein similar to protein phosphatase 1, regulatory (inhibitor) subunit 2 and two CpG islands, complete sequence Length = 126988 Score = 46.1 bits (23), Expect = 0.57 Identities = 26/27 (96%) Strand = Plus / Minus Query: 986 gttccacagtttccaaatggattctca 1012 ||||| ||||||||||||||||||||| Sbjct: 24498 gttcctcagtttccaaatggattctca 24472
>emb|AL671681.4| Human DNA sequence from clone XXbac-32M13 on chromosome 6 contains the 5' end of the HLA-DQB2 gene for major histocompatibility complex, class II, DQ beta 2, the HLA-DOB gene for major histocompatibility complex, class II, DO beta, the TAP2 gene for transporter 2, ATP-binding cassette, subfamily B (MDR/TAP), the PSMB8 gene for proteasome (prosome, macropain) subunit, beta type, 8 (large multifunctional protease 7), the TAP1 gene for transporter 1, ATP-binding cassette, sub-family B (MDR/TAP), the PSMB9 gene for proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional protease 2), the gene for a novel protein similar to protein phosphatase 1, regulatory (inhibitor) subunit 2 and three CpG islands, complete sequence Length = 166803 Score = 46.1 bits (23), Expect = 0.57 Identities = 26/27 (96%) Strand = Plus / Minus Query: 986 gttccacagtttccaaatggattctca 1012 ||||| ||||||||||||||||||||| Sbjct: 64319 gttcctcagtttccaaatggattctca 64293
>gb|AF105151.1|AF105151 Homo sapiens Tap2 transporter isoform (TAP2) mRNA, complete cds Length = 2497 Score = 46.1 bits (23), Expect = 0.57 Identities = 26/27 (96%) Strand = Plus / Plus Query: 986 gttccacagtttccaaatggattctca 1012 ||||| ||||||||||||||||||||| Sbjct: 2257 gttcctcagtttccaaatggattctca 2283
>emb|CR749765.5| Human DNA sequence from clone DASS-94G7 on chromosome 6, complete sequence Length = 19937 Score = 46.1 bits (23), Expect = 0.57 Identities = 26/27 (96%) Strand = Plus / Minus Query: 986 gttccacagtttccaaatggattctca 1012 ||||| ||||||||||||||||||||| Sbjct: 946 gttcctcagtttccaaatggattctca 920
>emb|CR762476.2| Human DNA sequence from clone DAAP-57C1 on chromosome 6, complete sequence Length = 95554 Score = 46.1 bits (23), Expect = 0.57 Identities = 26/27 (96%) Strand = Plus / Minus Query: 986 gttccacagtttccaaatggattctca 1012 ||||| ||||||||||||||||||||| Sbjct: 49998 gttcctcagtttccaaatggattctca 49972
>emb|CR753889.4| Human DNA sequence from clone DADB-78A10 on chromosome 6, complete sequence Length = 47546 Score = 46.1 bits (23), Expect = 0.57 Identities = 26/27 (96%) Strand = Plus / Minus Query: 986 gttccacagtttccaaatggattctca 1012 ||||| ||||||||||||||||||||| Sbjct: 5936 gttcctcagtttccaaatggattctca 5910
>dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710B08 Length = 186991 Score = 46.1 bits (23), Expect = 0.57 Identities = 23/23 (100%) Strand = Plus / Minus Query: 184 cgcgaggcggcggcggcgatgga 206 ||||||||||||||||||||||| Sbjct: 183406 cgcgaggcggcggcggcgatgga 183384
>dbj|AP003723.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0003H08 Length = 142068 Score = 46.1 bits (23), Expect = 0.57 Identities = 23/23 (100%) Strand = Plus / Minus Query: 184 cgcgaggcggcggcggcgatgga 206 ||||||||||||||||||||||| Sbjct: 34820 cgcgaggcggcggcggcgatgga 34798
>dbj|AK107197.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-A10, full insert sequence Length = 1919 Score = 46.1 bits (23), Expect = 0.57 Identities = 23/23 (100%) Strand = Plus / Minus Query: 184 cgcgaggcggcggcggcgatgga 206 ||||||||||||||||||||||| Sbjct: 49 cgcgaggcggcggcggcgatgga 27
>emb|BX664704.4| Human DNA sequence from clone DAQB-35G9 on chromosome 6, complete sequence Length = 110702 Score = 46.1 bits (23), Expect = 0.57 Identities = 26/27 (96%) Strand = Plus / Minus Query: 986 gttccacagtttccaaatggattctca 1012 ||||| ||||||||||||||||||||| Sbjct: 110653 gttcctcagtttccaaatggattctca 110627
>gb|AF152583.1|AF152583 Homo sapiens unknown mRNA Length = 436 Score = 46.1 bits (23), Expect = 0.57 Identities = 26/27 (96%) Strand = Plus / Plus Query: 986 gttccacagtttccaaatggattctca 1012 ||||| ||||||||||||||||||||| Sbjct: 196 gttcctcagtttccaaatggattctca 222
>emb|AJ510213.1|ATH510213 Arabidopsis thaliana ari10 gene for ARIADNE-like protein ARI10, exons 1-3 Length = 1898 Score = 46.1 bits (23), Expect = 0.57 Identities = 41/47 (87%) Strand = Plus / Plus Query: 1042 tggatactagctaattcgaagccttgtcccaagtgcaagcggcctat 1088 ||||||||||| ||||||||||| ||||| || ||||| || ||||| Sbjct: 808 tggatactagcgaattcgaagccatgtcctaaatgcaaacgtcctat 854
>emb|AL662956.3|OSJN00159 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018J19, complete sequence Length = 169559 Score = 46.1 bits (23), Expect = 0.57 Identities = 23/23 (100%) Strand = Plus / Plus Query: 179 cggtgcgcgaggcggcggcggcg 201 ||||||||||||||||||||||| Sbjct: 42171 cggtgcgcgaggcggcggcggcg 42193
>emb|AL606990.3|OSJN00122 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0066J23, complete sequence Length = 156934 Score = 46.1 bits (23), Expect = 0.57 Identities = 23/23 (100%) Strand = Plus / Plus Query: 179 cggtgcgcgaggcggcggcggcg 201 ||||||||||||||||||||||| Sbjct: 153130 cggtgcgcgaggcggcggcggcg 153152
>emb|X87344.1|HSEVMHC H.sapiens DMA, DMB, HLA-Z1, IPP2, LMP2, TAP1, LMP7, TAP2, DOB, DQB2 and RING8, 9, 13 and 14 genes Length = 198285 Score = 46.1 bits (23), Expect = 0.57 Identities = 26/27 (96%) Strand = Plus / Plus Query: 986 gttccacagtttccaaatggattctca 1012 ||||| ||||||||||||||||||||| Sbjct: 132373 gttcctcagtttccaaatggattctca 132399
>gb|AC123572.15| Medicago truncatula clone mth2-2b2, complete sequence Length = 119925 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 835 gaagataatagaaaaacaaaat 856 |||||||||||||||||||||| Sbjct: 33193 gaagataatagaaaaacaaaat 33172
>gb|AC140843.2| Mus musculus BAC clone RP24-443L17 from chromosome 14, complete sequence Length = 124918 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 980 tagattgttccacagtttccaa 1001 |||||||||||||||||||||| Sbjct: 76459 tagattgttccacagtttccaa 76438
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 185 gcgaggcggcggcggcgatgga 206 |||||||||||||||||||||| Sbjct: 8698155 gcgaggcggcggcggcgatgga 8698134
>emb|AL354723.17| Human DNA sequence from clone RP11-526D20 on chromosome 9 Contains the gene for voltage-gated potassium channel (Kv11.1), the 3' end of gene KIAA0020 and a CpG island, complete sequence Length = 159933 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 580 agagaacttacgtgtgggattt 601 |||||||||||||||||||||| Sbjct: 2147 agagaacttacgtgtgggattt 2126
>gb|AC135205.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1012B02, complete sequence Length = 115270 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 185 gcgaggcggcggcggcgatgga 206 |||||||||||||||||||||| Sbjct: 43971 gcgaggcggcggcggcgatgga 43950
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1952 accatcagcagcaccggtagat 1973 |||||||||||||||||||||| Sbjct: 1591584 accatcagcagcaccggtagat 1591563
>emb|CR735112.10| Zebrafish DNA sequence from clone CH211-222C11 in linkage group 5, complete sequence Length = 156543 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 839 ataatagaaaaacaaaatggtg 860 |||||||||||||||||||||| Sbjct: 21808 ataatagaaaaacaaaatggtg 21787
>emb|CT476825.1| S.lycopersicum DNA sequence from clone LE_HBa-198L24 on chromosome 4, complete sequence Length = 160432 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 422 tttcaactgttctttcaatttc 443 |||||||||||||||||||||| Sbjct: 92878 tttcaactgttctttcaatttc 92857
>emb|CT836265.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA121M06, full insert sequence Length = 1642 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 ggcggcggcggcgatggattc 209 ||||||||||||||||||||| Sbjct: 78 ggcggcggcggcgatggattc 98
>dbj|AK243323.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100057F06, full insert sequence Length = 1662 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 ggcggcggcggcgatggattc 209 ||||||||||||||||||||| Sbjct: 122 ggcggcggcggcgatggattc 142
>dbj|AK234103.1| Sus scrofa mRNA, clone:OVR010007H09, expressed in ovary Length = 1210 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 tgcgcgaggcggcggcggcga 202 ||||||||||||||||||||| Sbjct: 359 tgcgcgaggcggcggcggcga 339
>dbj|AK233224.1| Sus scrofa mRNA, clone:LVRM10106G06, expressed in liver Length = 1487 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 tgcgcgaggcggcggcggcga 202 ||||||||||||||||||||| Sbjct: 341 tgcgcgaggcggcggcggcga 321
>dbj|AK239529.1| Sus scrofa mRNA, clone:THY010111B12, expressed in thymus Length = 1191 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 tgcgcgaggcggcggcggcga 202 ||||||||||||||||||||| Sbjct: 344 tgcgcgaggcggcggcggcga 324
>dbj|AK235579.1| Sus scrofa mRNA, clone:OVRM10094F09, expressed in ovary Length = 1644 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 tgcgcgaggcggcggcggcga 202 ||||||||||||||||||||| Sbjct: 316 tgcgcgaggcggcggcggcga 296
>dbj|AK237734.1| Sus scrofa mRNA, clone:SPL010086E01, expressed in spleen Length = 1663 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 tgcgcgaggcggcggcggcga 202 ||||||||||||||||||||| Sbjct: 329 tgcgcgaggcggcggcggcga 309
>ref|NM_001065121.1| Oryza sativa (japonica cultivar-group) Os06g0715600 (Os06g0715600) mRNA, complete cds Length = 1683 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 189 ggcggcggcggcgatggattc 209 ||||||||||||||||||||| Sbjct: 102 ggcggcggcggcgatggattc 82
>ref|NM_001048756.1| Oryza sativa (japonica cultivar-group) Os01g0182700 (Os01g0182700) mRNA, complete cds Length = 1471 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 gcgaggcggcggcggcgatgg 205 ||||||||||||||||||||| Sbjct: 212 gcgaggcggcggcggcgatgg 232
>tpg|BK005213.1| TPA_inf: Oryza sativa (japonica cultivar-group) WRKY transcription factor 79 (WRKY79) gene, complete cds Length = 8893 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 gcgaggcggcggcggcgatgg 205 ||||||||||||||||||||| Sbjct: 479 gcgaggcggcggcggcgatgg 499
>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome Length = 6264404 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 cagcggcggcgaggcgggcctcgcc 273 ||||||||||||||| ||||||||| Sbjct: 4933443 cagcggcggcgaggccggcctcgcc 4933467
>gb|AF542528.2| Cryptococcus neoformans var. grubii strain 125.91 mating type a locus, complete sequence Length = 153973 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 149 tccgcccgatccggttcgctc 169 ||||||||||||||||||||| Sbjct: 32915 tccgcccgatccggttcgctc 32935
>gb|AY017825.1| Oryza sativa microsatellite MRG0150 containing (AG)X13, closest to marker R2614, genomic sequence Length = 226 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 189 ggcggcggcggcgatggattc 209 ||||||||||||||||||||| Sbjct: 165 ggcggcggcggcgatggattc 145
>gb|AC120865.7| Mus musculus chromosome 5, clone RP23-88L6, complete sequence Length = 235287 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 352 cagcagcaaaactacagtgta 372 ||||||||||||||||||||| Sbjct: 13419 cagcagcaaaactacagtgta 13439
>gb|AC164547.4| Mus musculus BAC clone RP24-198D11 from chromosome 13, complete sequence Length = 177190 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 695 taaacgatggtccaggatgtt 715 ||||||||||||||||||||| Sbjct: 35105 taaacgatggtccaggatgtt 35085
>gb|AC115933.7| Mus musculus chromosome 3, clone RP24-539I8, complete sequence Length = 187920 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 830 acattgaagataatagaaaaa 850 ||||||||||||||||||||| Sbjct: 26033 acattgaagataatagaaaaa 26053
>gb|AC165944.3| Mus musculus chromosome 3, clone RP24-134A8, complete sequence Length = 175118 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1502 accttccagaccatgaacatg 1522 ||||||||||||||||||||| Sbjct: 156950 accttccagaccatgaacatg 156930
>gb|AC100511.12| Mus musculus chromosome 3, clone RP23-144N19, complete sequence Length = 200790 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1502 accttccagaccatgaacatg 1522 ||||||||||||||||||||| Sbjct: 1182 accttccagaccatgaacatg 1162
>gb|AC159263.3| Mus musculus BAC clone RP24-66K21 from chromosome 13, complete sequence Length = 223738 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 695 taaacgatggtccaggatgtt 715 ||||||||||||||||||||| Sbjct: 114124 taaacgatggtccaggatgtt 114104
>gb|AY341853.1| Oryza sativa (japonica cultivar-group) WRKY12 mRNA, complete cds Length = 1470 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 gcgaggcggcggcggcgatgg 205 ||||||||||||||||||||| Sbjct: 212 gcgaggcggcggcggcgatgg 232
>ref|XM_804710.1| Trypanosoma cruzi strain CL Brener ABC transporter (Tc00.1047053506817.20) partial mRNA Length = 3000 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 450 agaagcatgcgcccttcttcgcagt 474 |||||||||||||||||||| |||| Sbjct: 1337 agaagcatgcgcccttcttcacagt 1313
>gb|L43052.1|ERVPOLY Equine rhinovirus 1 polyprotein gene, complete cds Length = 7636 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 436 tcaatttcaaaatcagaagca 456 ||||||||||||||||||||| Sbjct: 7182 tcaatttcaaaatcagaagca 7162
>gb|AC026583.10| Homo sapiens chromosome 15, clone RP11-20C17, complete sequence Length = 175472 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1550 aaggtgaagcagaatctggtt 1570 ||||||||||||||||||||| Sbjct: 174093 aaggtgaagcagaatctggtt 174113
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 gtgcgcgaggcggcggcggcg 201 ||||||||||||||||||||| Sbjct: 2402284 gtgcgcgaggcggcggcggcg 2402264 Score = 42.1 bits (21), Expect = 9.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 700 gatggtccaggatgtttgatgttgagatgtcctgatccatc 740 |||||||||||||||||| ||| |||| ||||||||||| Sbjct: 27042874 gatggtccaggatgtttgtcattgcgatgccctgatccatc 27042914 Score = 42.1 bits (21), Expect = 9.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1180 ggggagaggacaggtggtttttatgcttgtaatcgttatga 1220 |||||||| || ||||| ||||| ||||||||||| ||||| Sbjct: 27044436 ggggagagaactggtggattttacgcttgtaatcgctatga 27044476
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 185 gcgaggcggcggcggcgatgg 205 ||||||||||||||||||||| Sbjct: 4354890 gcgaggcggcggcggcgatgg 4354870 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 gcgaggcggcggcggcgatgg 205 ||||||||||||||||||||| Sbjct: 15979867 gcgaggcggcggcggcgatgg 15979887
>emb|CR352340.10| Zebrafish DNA sequence from clone CH211-191L23 in linkage group 17, complete sequence Length = 145947 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1632 atctaaagatttcaatgactt 1652 ||||||||||||||||||||| Sbjct: 129526 atctaaagatttcaatgactt 129506
>emb|AL731573.8| Human DNA sequence from clone RP11-215C13 on chromosome 10, complete sequence Length = 131465 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1130 catgtaaatttgaattctgct 1150 ||||||||||||||||||||| Sbjct: 33738 catgtaaatttgaattctgct 33718
>emb|AL445684.8| Human DNA sequence from clone RP11-45D15 on chromosome 9 Contains a CpG island, complete sequence Length = 140091 Score = 42.1 bits (21), Expect = 9.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 994 gtttccaaatggattctcaagaatagtgc 1022 |||||||||||| |||||||||| ||||| Sbjct: 9996 gtttccaaatggcttctcaagaacagtgc 9968
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 754 gttggacaagatatggttgat 774 ||||||||||||||||||||| Sbjct: 1350634 gttggacaagatatggttgat 1350654
>gb|AC154802.3| Mus musculus BAC clone RP24-502O7 from chromosome 12, complete sequence Length = 164001 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 836 aagataatagaaaaacaaaat 856 ||||||||||||||||||||| Sbjct: 118779 aagataatagaaaaacaaaat 118799
>dbj|AP002484.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0489A01 Length = 137174 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 185 gcgaggcggcggcggcgatgg 205 ||||||||||||||||||||| Sbjct: 14972 gcgaggcggcggcggcgatgg 14952
>emb|AL137080.2|ATF28O9 Arabidopsis thaliana DNA chromosome 3, BAC clone F28O9 Length = 85710 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 566 aaatgccaaacgaaagagaac 586 ||||||||||||||||||||| Sbjct: 2272 aaatgccaaacgaaagagaac 2292
>emb|AL138655.1|ATF24I3 Arabidopsis thaliana DNA chromosome 3, BAC clone F24I3 Length = 91303 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 566 aaatgccaaacgaaagagaac 586 ||||||||||||||||||||| Sbjct: 90826 aaatgccaaacgaaagagaac 90846
>emb|AJ544860.2|TSP544860 Thermotoga sp. RQ2 ORF1, ntpC gene, atpI gene, atpE gene, ntpG gene, ntpE gene, ntpA gene, ntpB gene, ntpD gene, ORF2, ORF3 and ORF4 (partial) Length = 11736 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 423 ttcaactgttctttcaatttc 443 ||||||||||||||||||||| Sbjct: 10329 ttcaactgttctttcaatttc 10309
>dbj|AP004592.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0666G10 Length = 150761 Score = 42.1 bits (21), Expect = 9.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 700 gatggtccaggatgtttgatgttgagatgtcctgatccatc 740 |||||||||||||||||| ||| |||| ||||||||||| Sbjct: 144274 gatggtccaggatgtttgtcattgcgatgccctgatccatc 144314 Score = 42.1 bits (21), Expect = 9.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1180 ggggagaggacaggtggtttttatgcttgtaatcgttatga 1220 |||||||| || ||||| ||||| ||||||||||| ||||| Sbjct: 145836 ggggagagaactggtggattttacgcttgtaatcgctatga 145876
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 gcgcgaggcggcggcggcgat 203 ||||||||||||||||||||| Sbjct: 1968356 gcgcgaggcggcggcggcgat 1968376
>dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0666G04 Length = 141983 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 185 gcgaggcggcggcggcgatgg 205 ||||||||||||||||||||| Sbjct: 134660 gcgaggcggcggcggcgatgg 134640
>dbj|AP003853.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0091E23 Length = 155939 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 gcgaggcggcggcggcgatgg 205 ||||||||||||||||||||| Sbjct: 71452 gcgaggcggcggcggcgatgg 71472
>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481E08 Length = 171965 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 ggcggcggcggcgatggattc 209 ||||||||||||||||||||| Sbjct: 60859 ggcggcggcggcgatggattc 60879
>dbj|AP005760.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1047G05 Length = 145431 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 ggcggcggcggcgatggattc 209 ||||||||||||||||||||| Sbjct: 61479 ggcggcggcggcgatggattc 61499
>dbj|AP004803.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0677B10 Length = 134423 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 ggcggcggcggcgatggattc 209 ||||||||||||||||||||| Sbjct: 120446 ggcggcggcggcgatggattc 120466
>dbj|AP004381.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0025F03 Length = 138042 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 gtgcgcgaggcggcggcggcg 201 ||||||||||||||||||||| Sbjct: 78254 gtgcgcgaggcggcggcggcg 78234
>gb|AC009301.3| Homo sapiens BAC clone RP11-62F14 from 2, complete sequence Length = 129625 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1250 attctgaaaggagaagagaaa 1270 ||||||||||||||||||||| Sbjct: 36458 attctgaaaggagaagagaaa 36438
>dbj|AP003948.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1211_G06 Length = 96421 Score = 42.1 bits (21), Expect = 9.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 700 gatggtccaggatgtttgatgttgagatgtcctgatccatc 740 |||||||||||||||||| ||| |||| ||||||||||| Sbjct: 13961 gatggtccaggatgtttgtcattgcgatgccctgatccatc 14001 Score = 42.1 bits (21), Expect = 9.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1180 ggggagaggacaggtggtttttatgcttgtaatcgttatga 1220 |||||||| || ||||| ||||| ||||||||||| ||||| Sbjct: 15523 ggggagagaactggtggattttacgcttgtaatcgctatga 15563
>ref|XM_953497.1| Neurospora crassa OR74A hypothetical protein (NCU09438.1) partial mRNA Length = 4335 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 921 ttcttgtggctgttcttacgg 941 ||||||||||||||||||||| Sbjct: 2816 ttcttgtggctgttcttacgg 2796
>gb|AC011648.12| Homo sapiens chromosome 15, clone RP11-15F13, complete sequence Length = 107336 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1550 aaggtgaagcagaatctggtt 1570 ||||||||||||||||||||| Sbjct: 82405 aaggtgaagcagaatctggtt 82385
>dbj|AK108755.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-F11, full insert sequence Length = 1204 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 gcgaggcggcggcggcgatgg 205 ||||||||||||||||||||| Sbjct: 477 gcgaggcggcggcggcgatgg 497
>dbj|AK102724.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105L03, full insert sequence Length = 1684 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 189 ggcggcggcggcgatggattc 209 ||||||||||||||||||||| Sbjct: 103 ggcggcggcggcgatggattc 83
>dbj|AK059304.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-F11, full insert sequence Length = 1631 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 189 ggcggcggcggcgatggattc 209 ||||||||||||||||||||| Sbjct: 57 ggcggcggcggcgatggattc 37
>gb|U19797.2|PAU19797 Pseudomonas aeruginosa D-alanine:D-alanine ligase B (ddlB), FtsQ (ftsQ), FtsA (ftsA), FtsZ (ftsZ), UDP-3-0-acyl N-acetylglucosamine deacetylase (lpxC), hypothetical protein, and preprotein translocase (secA) genes, complete cds Length = 10387 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 249 cagcggcggcgaggcgggcctcgcc 273 ||||||||||||||| ||||||||| Sbjct: 10213 cagcggcggcgaggccggcctcgcc 10189
>ref|NM_212060.1| Eremothecium gossypii AGR332Cp (AGR332C), mRNA Length = 2253 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 754 gttggacaagatatggttgat 774 ||||||||||||||||||||| Sbjct: 1869 gttggacaagatatggttgat 1849
>gb|AC159269.3| Mus musculus BAC clone RP23-426N14 from chromosome 12, complete sequence Length = 184137 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 836 aagataatagaaaaacaaaat 856 ||||||||||||||||||||| Sbjct: 7464 aagataatagaaaaacaaaat 7484
>gb|AC159642.2| Mus musculus BAC clone RP23-415N22 from chromosome 12, complete sequence Length = 197100 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1880 atggcaacatctgggcctgtg 1900 ||||||||||||||||||||| Sbjct: 77598 atggcaacatctgggcctgtg 77618
>gb|AC171003.2| Mus musculus BAC clone RP23-207H9 from chromosome 13, complete sequence Length = 218821 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 695 taaacgatggtccaggatgtt 715 ||||||||||||||||||||| Sbjct: 213985 taaacgatggtccaggatgtt 214005
>gb|DQ272127.1| Equine rhinitis A virus strain Plowright, complete genome Length = 7442 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 436 tcaatttcaaaatcagaagca 456 ||||||||||||||||||||| Sbjct: 6972 tcaatttcaaaatcagaagca 6952
>gb|DQ272128.1| Equine rhinitis A virus strain U188, complete genome Length = 7444 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 436 tcaatttcaaaatcagaagca 456 ||||||||||||||||||||| Sbjct: 6974 tcaatttcaaaatcagaagca 6954
>gb|DQ268580.1| Equine rhinitis A virus strain T3, complete genome Length = 7778 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 436 tcaatttcaaaatcagaagca 456 ||||||||||||||||||||| Sbjct: 7309 tcaatttcaaaatcagaagca 7289
>gb|DQ272577.1| Equine rhinitis A virus strain T10, complete genome Length = 7442 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 436 tcaatttcaaaatcagaagca 456 ||||||||||||||||||||| Sbjct: 6972 tcaatttcaaaatcagaagca 6952
>gb|AC115043.10| Mus musculus chromosome 3, clone RP24-294N3, complete sequence Length = 150336 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 830 acattgaagataatagaaaaa 850 ||||||||||||||||||||| Sbjct: 3547 acattgaagataatagaaaaa 3527 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 395,388,357 Number of extensions: 21639034 Number of successful extensions: 128601 Number of sequences better than 10.0: 149 Number of HSP's gapped: 128586 Number of HSP's successfully gapped: 327 Length of query: 2345 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2322 Effective length of database: 18,503,978,556 Effective search space: 42966238207032 Effective search space used: 42966238207032 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
