| Clone Name | FLbaf147h03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001052228.1| Oryza sativa (japonica cultivar-group) Os02g0118200 (Os02g0118200) mRNA, complete cds Length = 1609 Score = 230 bits (116), Expect = 1e-56 Identities = 167/184 (90%) Strand = Plus / Plus Query: 704 gtcctccactatcatgggaactgaggctgaagattgccatcggcgcagctcgaggacttg 763 |||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||| Sbjct: 705 gtcctccactatcatgggaactgaggctgaagatagccattggtgcagctcgaggacttg 764 Query: 764 ccttcttgcatgcatcagagaagcaagccatgtaccgtgacttcaaggcttccaagattc 823 | ||| ||||||| ||||| || |||| ||| ||||||||||| ||||||||||| |||| Sbjct: 765 cgttcctgcatgcctcagaaaaacaagtcatctaccgtgactttaaggcttccaacattc 824 Query: 824 ttctagatgcacactataacgcaaagctctctgattttgggcttgctaagcttgggtcaa 883 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 825 ttctagatgctaactataatgcaaagctctctgattttgggcttgctaagcttggaccaa 884 Query: 884 ctgg 887 |||| Sbjct: 885 ctgg 888 Score = 79.8 bits (40), Expect = 3e-11 Identities = 148/184 (80%) Strand = Plus / Plus Query: 325 ggccaaatactggaggcaccgaacatccggaagttcacattccctgagattcggacagtt 384 ||||| || ||||||||||| ||| || ||| ||||||||| |||| | |||||| Sbjct: 335 ggccagatcctggaggcaccaaacctcaggacattcacattcattgagctcaggacagcc 394 Query: 385 accaggaacttcaagccagattatctccttggggtgggggcttttgggtcggtgtacaaa 444 |||| |||||||| ||| ||| | | ||||||| ||| | |||||| |||||||||| Sbjct: 395 accaagaacttcaggccggatagtgttcttggggagggaggctttgggagggtgtacaaa 454 Query: 445 gcatgggtcgatgagaagacgatgaacccgacaacgagtggcaccggcatggctgttgct 504 | |||||| ||||||||||||||||||||| | | | ||||||||||||| ||||||| Sbjct: 455 ggatgggtggatgagaagacgatgaacccggtgaagggcggcaccggcatggttgttgct 514 Query: 505 gtca 508 |||| Sbjct: 515 gtca 518 Score = 61.9 bits (31), Expect = 6e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 589 ccaaaccttgtcaagctactgggctactgctgggagggcaaggaactattccttgtgcac 648 |||||||| |||||||| |||||||||||| |||| ||||||||| || || ||| | Sbjct: 596 ccaaacctagtcaagctcttgggctactgctttgaggacaaggaacttttgctcgtgtat 655 Query: 649 gacttcatggcccaagggagctt 671 || ||||||||| |||||||||| Sbjct: 656 gaattcatggccaaagggagctt 678 Score = 56.0 bits (28), Expect = 4e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 973 agtgacgtttacggtttcgggattatgatgctggagatcctgtccggtaagcgagc 1028 ||||| |||||||||||||| || ||||||||||||| |||||||| ||||||| Sbjct: 977 agtgatgtttacggtttcggagttgtgatgctggagatgatgtccggtcagcgagc 1032 Score = 42.1 bits (21), Expect = 5.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1114 atggaccgccggctggagggccaatacaactccaaacaagc 1154 ||||||| |||| | |||||||| || |||||||||||||| Sbjct: 1121 atggacccccggtttgagggccagtataactccaaacaagc 1161
>dbj|AK111716.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022O07, full insert sequence Length = 1611 Score = 222 bits (112), Expect = 3e-54 Identities = 166/184 (90%) Strand = Plus / Plus Query: 704 gtcctccactatcatgggaactgaggctgaagattgccatcggcgcagctcgaggacttg 763 |||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||| Sbjct: 707 gtcctccactatcatgggaactgaggctgaagatagccattggtgcagctcgaggacttg 766 Query: 764 ccttcttgcatgcatcagagaagcaagccatgtaccgtgacttcaaggcttccaagattc 823 | ||| ||||||| ||||| || |||| ||| |||||||| || ||||||||||| |||| Sbjct: 767 cgttcctgcatgcctcagaaaaacaagtcatctaccgtgattttaaggcttccaacattc 826 Query: 824 ttctagatgcacactataacgcaaagctctctgattttgggcttgctaagcttgggtcaa 883 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 827 ttctagatgctaactataatgcaaagctctctgattttgggcttgctaagcttggaccaa 886 Query: 884 ctgg 887 |||| Sbjct: 887 ctgg 890 Score = 79.8 bits (40), Expect = 3e-11 Identities = 148/184 (80%) Strand = Plus / Plus Query: 325 ggccaaatactggaggcaccgaacatccggaagttcacattccctgagattcggacagtt 384 ||||| || ||||||||||| ||| || ||| ||||||||| |||| | |||||| Sbjct: 337 ggccagatcctggaggcaccaaacctcaggacattcacattcattgagctcaggacagcc 396 Query: 385 accaggaacttcaagccagattatctccttggggtgggggcttttgggtcggtgtacaaa 444 |||| |||||||| ||| ||| | | ||||||| ||| | |||||| |||||||||| Sbjct: 397 accaagaacttcaggccggatagtgttcttggggagggaggctttgggagggtgtacaaa 456 Query: 445 gcatgggtcgatgagaagacgatgaacccgacaacgagtggcaccggcatggctgttgct 504 | |||||| ||||||||||||||||||||| | | | ||||||||||||| ||||||| Sbjct: 457 ggatgggtggatgagaagacgatgaacccggtgaagggcggcaccggcatggttgttgct 516 Query: 505 gtca 508 |||| Sbjct: 517 gtca 520 Score = 67.9 bits (34), Expect = 1e-07 Identities = 91/110 (82%) Strand = Plus / Plus Query: 562 ataaaccttttgggaaagttctctcacccaaaccttgtcaagctactgggctactgctgg 621 |||||| || |||| | |||||| || |||||||| |||||||| |||||||||||| Sbjct: 571 ataaactttctgggtaggttctcgcatccaaacctagtcaagctcttgggctactgcttt 630 Query: 622 gagggcaaggaactattccttgtgcacgacttcatggcccaagggagctt 671 |||| ||||||||| || || ||| | || ||||||||| |||||||||| Sbjct: 631 gaggacaaggaacttttgctcgtgtatgaattcatggccaaagggagctt 680 Score = 56.0 bits (28), Expect = 4e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 973 agtgacgtttacggtttcgggattatgatgctggagatcctgtccggtaagcgagc 1028 ||||| |||||||||||||| || ||||||||||||| |||||||| ||||||| Sbjct: 979 agtgatgtttacggtttcggagttgtgatgctggagatgatgtccggtcagcgagc 1034 Score = 42.1 bits (21), Expect = 5.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1114 atggaccgccggctggagggccaatacaactccaaacaagc 1154 ||||||| |||| | |||||||| || |||||||||||||| Sbjct: 1123 atggacccccggtttgagggccagtataactccaaacaagc 1163
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 165 bits (83), Expect = 6e-37 Identities = 128/143 (89%) Strand = Plus / Plus Query: 691 ttttcaggaagacgtcctccactatcatgggaactgaggctgaagattgccatcggcgca 750 ||||||| | || |||||||||||||||||||||||||||||||||| ||||| || ||| Sbjct: 952949 ttttcagaaggatgtcctccactatcatgggaactgaggctgaagatagccattggtgca 953008 Query: 751 gctcgaggacttgccttcttgcatgcatcagagaagcaagccatgtaccgtgacttcaag 810 |||||||||||||| ||| ||||||| ||||| || |||| ||| ||||||||||| ||| Sbjct: 953009 gctcgaggacttgcgttcctgcatgcctcagaaaaacaagtcatctaccgtgactttaag 953068 Query: 811 gcttccaagattcttctagatgc 833 |||||||| |||||||||||||| Sbjct: 953069 gcttccaacattcttctagatgc 953091 Score = 79.8 bits (40), Expect = 3e-11 Identities = 148/184 (80%) Strand = Plus / Plus Query: 325 ggccaaatactggaggcaccgaacatccggaagttcacattccctgagattcggacagtt 384 ||||| || ||||||||||| ||| || ||| ||||||||| |||| | |||||| Sbjct: 951697 ggccagatcctggaggcaccaaacctcaggacattcacattcattgagctcaggacagcc 951756 Query: 385 accaggaacttcaagccagattatctccttggggtgggggcttttgggtcggtgtacaaa 444 |||| |||||||| ||| ||| | | ||||||| ||| | |||||| |||||||||| Sbjct: 951757 accaagaacttcaggccggatagtgttcttggggagggaggctttgggagggtgtacaaa 951816 Query: 445 gcatgggtcgatgagaagacgatgaacccgacaacgagtggcaccggcatggctgttgct 504 | |||||| ||||||||||||||||||||| | | | ||||||||||||| ||||||| Sbjct: 951817 ggatgggtggatgagaagacgatgaacccggtgaagggcggcaccggcatggttgttgct 951876 Query: 505 gtca 508 |||| Sbjct: 951877 gtca 951880 Score = 79.8 bits (40), Expect = 3e-11 Identities = 49/52 (94%) Strand = Plus / Plus Query: 836 actataacgcaaagctctctgattttgggcttgctaagcttgggtcaactgg 887 ||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 953169 actataatgcaaagctctctgattttgggcttgctaagcttggaccaactgg 953220 Score = 73.8 bits (37), Expect = 2e-09 Identities = 61/69 (88%) Strand = Plus / Minus Query: 603 gctactgggctactgctgggagggcaaggaactattccttgtgcacgacttcatggccca 662 ||||||||||||||||||||||| |||||| ||| | |||||| |||| | ||||||||| Sbjct: 27235106 gctactgggctactgctgggaggacaaggagctactgcttgtgtacgagtacatggccca 27235047 Query: 663 agggagctt 671 ||| ||||| Sbjct: 27235046 aggcagctt 27235038 Score = 61.9 bits (31), Expect = 6e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 589 ccaaaccttgtcaagctactgggctactgctgggagggcaaggaactattccttgtgcac 648 |||||||| |||||||| |||||||||||| |||| ||||||||| || || ||| | Sbjct: 952586 ccaaacctagtcaagctcttgggctactgctttgaggacaaggaacttttgctcgtgtat 952645 Query: 649 gacttcatggcccaagggagctt 671 || ||||||||| |||||||||| Sbjct: 952646 gaattcatggccaaagggagctt 952668 Score = 56.0 bits (28), Expect = 4e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 973 agtgacgtttacggtttcgggattatgatgctggagatcctgtccggtaagcgagc 1028 ||||| |||||||||||||| || ||||||||||||| |||||||| ||||||| Sbjct: 954058 agtgatgtttacggtttcggagttgtgatgctggagatgatgtccggtcagcgagc 954113 Score = 42.1 bits (21), Expect = 5.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1114 atggaccgccggctggagggccaatacaactccaaacaagc 1154 ||||||| |||| | |||||||| || |||||||||||||| Sbjct: 954202 atggacccccggtttgagggccagtataactccaaacaagc 954242
>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1442_E05 Length = 162407 Score = 165 bits (83), Expect = 6e-37 Identities = 128/143 (89%) Strand = Plus / Plus Query: 691 ttttcaggaagacgtcctccactatcatgggaactgaggctgaagattgccatcggcgca 750 ||||||| | || |||||||||||||||||||||||||||||||||| ||||| || ||| Sbjct: 162157 ttttcagaaggatgtcctccactatcatgggaactgaggctgaagatagccattggtgca 162216 Query: 751 gctcgaggacttgccttcttgcatgcatcagagaagcaagccatgtaccgtgacttcaag 810 |||||||||||||| ||| ||||||| ||||| || |||| ||| ||||||||||| ||| Sbjct: 162217 gctcgaggacttgcgttcctgcatgcctcagaaaaacaagtcatctaccgtgactttaag 162276 Query: 811 gcttccaagattcttctagatgc 833 |||||||| |||||||||||||| Sbjct: 162277 gcttccaacattcttctagatgc 162299 Score = 79.8 bits (40), Expect = 3e-11 Identities = 148/184 (80%) Strand = Plus / Plus Query: 325 ggccaaatactggaggcaccgaacatccggaagttcacattccctgagattcggacagtt 384 ||||| || ||||||||||| ||| || ||| ||||||||| |||| | |||||| Sbjct: 160905 ggccagatcctggaggcaccaaacctcaggacattcacattcattgagctcaggacagcc 160964 Query: 385 accaggaacttcaagccagattatctccttggggtgggggcttttgggtcggtgtacaaa 444 |||| |||||||| ||| ||| | | ||||||| ||| | |||||| |||||||||| Sbjct: 160965 accaagaacttcaggccggatagtgttcttggggagggaggctttgggagggtgtacaaa 161024 Query: 445 gcatgggtcgatgagaagacgatgaacccgacaacgagtggcaccggcatggctgttgct 504 | |||||| ||||||||||||||||||||| | | | ||||||||||||| ||||||| Sbjct: 161025 ggatgggtggatgagaagacgatgaacccggtgaagggcggcaccggcatggttgttgct 161084 Query: 505 gtca 508 |||| Sbjct: 161085 gtca 161088 Score = 61.9 bits (31), Expect = 6e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 589 ccaaaccttgtcaagctactgggctactgctgggagggcaaggaactattccttgtgcac 648 |||||||| |||||||| |||||||||||| |||| ||||||||| || || ||| | Sbjct: 161794 ccaaacctagtcaagctcttgggctactgctttgaggacaaggaacttttgctcgtgtat 161853 Query: 649 gacttcatggcccaagggagctt 671 || ||||||||| |||||||||| Sbjct: 161854 gaattcatggccaaagggagctt 161876 Score = 54.0 bits (27), Expect = 0.002 Identities = 30/31 (96%) Strand = Plus / Plus Query: 836 actataacgcaaagctctctgattttgggct 866 ||||||| ||||||||||||||||||||||| Sbjct: 162377 actataatgcaaagctctctgattttgggct 162407
>dbj|AP004084.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1217_F02 Length = 118822 Score = 165 bits (83), Expect = 6e-37 Identities = 128/143 (89%) Strand = Plus / Plus Query: 691 ttttcaggaagacgtcctccactatcatgggaactgaggctgaagattgccatcggcgca 750 ||||||| | || |||||||||||||||||||||||||||||||||| ||||| || ||| Sbjct: 24368 ttttcagaaggatgtcctccactatcatgggaactgaggctgaagatagccattggtgca 24427 Query: 751 gctcgaggacttgccttcttgcatgcatcagagaagcaagccatgtaccgtgacttcaag 810 |||||||||||||| ||| ||||||| ||||| || |||| ||| ||||||||||| ||| Sbjct: 24428 gctcgaggacttgcgttcctgcatgcctcagaaaaacaagtcatctaccgtgactttaag 24487 Query: 811 gcttccaagattcttctagatgc 833 |||||||| |||||||||||||| Sbjct: 24488 gcttccaacattcttctagatgc 24510 Score = 79.8 bits (40), Expect = 3e-11 Identities = 148/184 (80%) Strand = Plus / Plus Query: 325 ggccaaatactggaggcaccgaacatccggaagttcacattccctgagattcggacagtt 384 ||||| || ||||||||||| ||| || ||| ||||||||| |||| | |||||| Sbjct: 23116 ggccagatcctggaggcaccaaacctcaggacattcacattcattgagctcaggacagcc 23175 Query: 385 accaggaacttcaagccagattatctccttggggtgggggcttttgggtcggtgtacaaa 444 |||| |||||||| ||| ||| | | ||||||| ||| | |||||| |||||||||| Sbjct: 23176 accaagaacttcaggccggatagtgttcttggggagggaggctttgggagggtgtacaaa 23235 Query: 445 gcatgggtcgatgagaagacgatgaacccgacaacgagtggcaccggcatggctgttgct 504 | |||||| ||||||||||||||||||||| | | | ||||||||||||| ||||||| Sbjct: 23236 ggatgggtggatgagaagacgatgaacccggtgaagggcggcaccggcatggttgttgct 23295 Query: 505 gtca 508 |||| Sbjct: 23296 gtca 23299 Score = 79.8 bits (40), Expect = 3e-11 Identities = 49/52 (94%) Strand = Plus / Plus Query: 836 actataacgcaaagctctctgattttgggcttgctaagcttgggtcaactgg 887 ||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 24588 actataatgcaaagctctctgattttgggcttgctaagcttggaccaactgg 24639 Score = 61.9 bits (31), Expect = 6e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 589 ccaaaccttgtcaagctactgggctactgctgggagggcaaggaactattccttgtgcac 648 |||||||| |||||||| |||||||||||| |||| ||||||||| || || ||| | Sbjct: 24005 ccaaacctagtcaagctcttgggctactgctttgaggacaaggaacttttgctcgtgtat 24064 Query: 649 gacttcatggcccaagggagctt 671 || ||||||||| |||||||||| Sbjct: 24065 gaattcatggccaaagggagctt 24087 Score = 56.0 bits (28), Expect = 4e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 973 agtgacgtttacggtttcgggattatgatgctggagatcctgtccggtaagcgagc 1028 ||||| |||||||||||||| || ||||||||||||| |||||||| ||||||| Sbjct: 25477 agtgatgtttacggtttcggagttgtgatgctggagatgatgtccggtcagcgagc 25532 Score = 42.1 bits (21), Expect = 5.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1114 atggaccgccggctggagggccaatacaactccaaacaagc 1154 ||||||| |||| | |||||||| || |||||||||||||| Sbjct: 25621 atggacccccggtttgagggccagtataactccaaacaagc 25661
>ref|NM_001054229.1| Oryza sativa (japonica cultivar-group) Os02g0670100 (Os02g0670100) mRNA, complete cds Length = 1377 Score = 73.8 bits (37), Expect = 2e-09 Identities = 61/69 (88%) Strand = Plus / Plus Query: 603 gctactgggctactgctgggagggcaaggaactattccttgtgcacgacttcatggccca 662 ||||||||||||||||||||||| |||||| ||| | |||||| |||| | ||||||||| Sbjct: 534 gctactgggctactgctgggaggacaaggagctactgcttgtgtacgagtacatggccca 593 Query: 663 agggagctt 671 ||| ||||| Sbjct: 594 aggcagctt 602
>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1725_H08 Length = 155431 Score = 73.8 bits (37), Expect = 2e-09 Identities = 61/69 (88%) Strand = Plus / Minus Query: 603 gctactgggctactgctgggagggcaaggaactattccttgtgcacgacttcatggccca 662 ||||||||||||||||||||||| |||||| ||| | |||||| |||| | ||||||||| Sbjct: 131555 gctactgggctactgctgggaggacaaggagctactgcttgtgtacgagtacatggccca 131496 Query: 663 agggagctt 671 ||| ||||| Sbjct: 131495 aggcagctt 131487
>dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684A08 Length = 137841 Score = 73.8 bits (37), Expect = 2e-09 Identities = 61/69 (88%) Strand = Plus / Minus Query: 603 gctactgggctactgctgggagggcaaggaactattccttgtgcacgacttcatggccca 662 ||||||||||||||||||||||| |||||| ||| | |||||| |||| | ||||||||| Sbjct: 85777 gctactgggctactgctgggaggacaaggagctactgcttgtgtacgagtacatggccca 85718 Query: 663 agggagctt 671 ||| ||||| Sbjct: 85717 aggcagctt 85709
>gb|AY106572.1| Zea mays PCO116075 mRNA sequence Length = 1018 Score = 65.9 bits (33), Expect = 4e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 820 attcttctagatgcacactataacgcaaagctctctgattttgggcttgctaa 872 |||||| ||||||| ||||||||||||| |||||||||||||| |||||||| Sbjct: 826 attcttttagatgcggactataacgcaaaactctctgattttggacttgctaa 878
>gb|AC155348.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH097M21, complete sequence Length = 131063 Score = 61.9 bits (31), Expect = 6e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 838 tataacgcaaagctctctgattttgggcttgctaa 872 |||||||||||||||||||||||||| |||||||| Sbjct: 100726 tataacgcaaagctctctgattttggacttgctaa 100692
>dbj|AP006107.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT29P11, TM0193, complete sequence Length = 102354 Score = 58.0 bits (29), Expect = 1e-04 Identities = 50/57 (87%) Strand = Plus / Plus Query: 569 ttttgggaaagttctctcacccaaaccttgtcaagctactgggctactgctgggagg 625 ||||||| ||||||||||| |||||||| || || ||||| || ||||||||||||| Sbjct: 15291 ttttggggaagttctctcatccaaacctggttaaactactaggatactgctgggagg 15347 Score = 52.0 bits (26), Expect = 0.006 Identities = 26/26 (100%) Strand = Plus / Plus Query: 853 tctgattttgggcttgctaagcttgg 878 |||||||||||||||||||||||||| Sbjct: 8818 tctgattttgggcttgctaagcttgg 8843
>ref|NM_001035713.1| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase (AT3G28690) mRNA, complete cds Length = 1710 Score = 56.0 bits (28), Expect = 4e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 838 tataacgcaaagctctctgattttgggcttgc 869 ||||| |||||||||||||||||||||||||| Sbjct: 716 tataatgcaaagctctctgattttgggcttgc 747
>ref|NM_113789.3| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase (AT3G28690) mRNA, complete cds Length = 2468 Score = 56.0 bits (28), Expect = 4e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 838 tataacgcaaagctctctgattttgggcttgc 869 ||||| |||||||||||||||||||||||||| Sbjct: 1474 tataatgcaaagctctctgattttgggcttgc 1505
>dbj|AP000420.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MZN14 Length = 82890 Score = 56.0 bits (28), Expect = 4e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 838 tataacgcaaagctctctgattttgggcttgc 869 ||||| |||||||||||||||||||||||||| Sbjct: 59357 tataatgcaaagctctctgattttgggcttgc 59388
>emb|BX824214.1|CNS0A7D1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH30ZC07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2419 Score = 56.0 bits (28), Expect = 4e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 838 tataacgcaaagctctctgattttgggcttgc 869 ||||| |||||||||||||||||||||||||| Sbjct: 1472 tataatgcaaagctctctgattttgggcttgc 1503
>emb|BX824669.1|CNS0A5QX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH63ZD06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1497 Score = 56.0 bits (28), Expect = 4e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 838 tataacgcaaagctctctgattttgggcttgc 869 ||||| |||||||||||||||||||||||||| Sbjct: 589 tataatgcaaagctctctgattttgggcttgc 620
>emb|CT009572.21| Mouse DNA sequence from clone RP23-135A16 on chromosome 17, complete sequence Length = 210579 Score = 54.0 bits (27), Expect = 0.002 Identities = 27/27 (100%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctctccc 73 ||||||||||||||||||||||||||| Sbjct: 76214 tctccctcttcttcctcttcctctccc 76188 Score = 48.1 bits (24), Expect = 0.095 Identities = 24/24 (100%) Strand = Plus / Minus Query: 50 ccctcttcttcctcttcctctccc 73 |||||||||||||||||||||||| Sbjct: 76052 ccctcttcttcctcttcctctccc 76029 Score = 48.1 bits (24), Expect = 0.095 Identities = 24/24 (100%) Strand = Plus / Minus Query: 50 ccctcttcttcctcttcctctccc 73 |||||||||||||||||||||||| Sbjct: 76154 ccctcttcttcctcttcctctccc 76131 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 ccctcttcttcctcttcctct 70 ||||||||||||||||||||| Sbjct: 75897 ccctcttcttcctcttcctct 75877 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 ccctcttcttcctcttcctct 70 ||||||||||||||||||||| Sbjct: 75955 ccctcttcttcctcttcctct 75935 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 ccctcttcttcctcttcctct 70 ||||||||||||||||||||| Sbjct: 76013 ccctcttcttcctcttcctct 75993 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 ccctcttcttcctcttcctct 70 ||||||||||||||||||||| Sbjct: 76115 ccctcttcttcctcttcctct 76095
>gb|AC151275.3| Mus musculus BAC clone RP24-201F8 from chromosome 17, complete sequence Length = 190772 Score = 54.0 bits (27), Expect = 0.002 Identities = 27/27 (100%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctctccc 73 ||||||||||||||||||||||||||| Sbjct: 180442 tctccctcttcttcctcttcctctccc 180416 Score = 48.1 bits (24), Expect = 0.095 Identities = 24/24 (100%) Strand = Plus / Minus Query: 50 ccctcttcttcctcttcctctccc 73 |||||||||||||||||||||||| Sbjct: 180313 ccctcttcttcctcttcctctccc 180290 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 ccctcttcttcctcttcctct 70 ||||||||||||||||||||| Sbjct: 180158 ccctcttcttcctcttcctct 180138 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 ccctcttcttcctcttcctct 70 ||||||||||||||||||||| Sbjct: 180216 ccctcttcttcctcttcctct 180196 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 ccctcttcttcctcttcctct 70 ||||||||||||||||||||| Sbjct: 180274 ccctcttcttcctcttcctct 180254
>gb|AC129537.8| Mus musculus chromosome 15, clone RP23-238H13, complete sequence Length = 215416 Score = 52.0 bits (26), Expect = 0.006 Identities = 29/30 (96%) Strand = Plus / Plus Query: 48 ctccctcttcttcctcttcctctcccctcc 77 ||||| |||||||||||||||||||||||| Sbjct: 179921 ctcccccttcttcctcttcctctcccctcc 179950
>gb|AC118227.12| Mus musculus chromosome 15, clone RP23-379H6, complete sequence Length = 200663 Score = 50.1 bits (25), Expect = 0.024 Identities = 25/25 (100%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctctc 71 ||||||||||||||||||||||||| Sbjct: 148727 tctccctcttcttcctcttcctctc 148703 Score = 48.1 bits (24), Expect = 0.095 Identities = 24/24 (100%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctct 70 |||||||||||||||||||||||| Sbjct: 148793 tctccctcttcttcctcttcctct 148770
>emb|AL445463.8| Human DNA sequence from clone RP11-264H19 on chromosome 10 Contains part of the BTRC gene for beta-transducin repeat containing, complete sequence Length = 143078 Score = 50.1 bits (25), Expect = 0.024 Identities = 25/25 (100%) Strand = Plus / Plus Query: 53 tcttcttcctcttcctctcccctcc 77 ||||||||||||||||||||||||| Sbjct: 40217 tcttcttcctcttcctctcccctcc 40241
>gb|AC156021.2| Mus musculus BAC clone RP23-256A5 from chromosome 5, complete sequence Length = 217987 Score = 50.1 bits (25), Expect = 0.024 Identities = 28/29 (96%) Strand = Plus / Plus Query: 49 tccctcttcttcctcttcctctcccctcc 77 ||||||| ||||||||||||||||||||| Sbjct: 49280 tccctctccttcctcttcctctcccctcc 49308
>ref|XM_001221641.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_05547) mRNA, complete cds Length = 4530 Score = 48.1 bits (24), Expect = 0.095 Identities = 24/24 (100%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctct 70 |||||||||||||||||||||||| Sbjct: 4421 tctccctcttcttcctcttcctct 4398
>ref|XM_001187050.1| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC576056 (LOC576056), mRNA Length = 315 Score = 48.1 bits (24), Expect = 0.095 Identities = 24/24 (100%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctct 70 |||||||||||||||||||||||| Sbjct: 110 tctccctcttcttcctcttcctct 87
>ref|XM_776402.2| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC576056 (LOC576056), mRNA Length = 315 Score = 48.1 bits (24), Expect = 0.095 Identities = 24/24 (100%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctct 70 |||||||||||||||||||||||| Sbjct: 110 tctccctcttcttcctcttcctct 87
>ref|XM_001053229.1| PREDICTED: Rattus norvegicus hypothetical protein LOC678744 (LOC678744), mRNA Length = 390 Score = 48.1 bits (24), Expect = 0.095 Identities = 24/24 (100%) Strand = Plus / Minus Query: 50 ccctcttcttcctcttcctctccc 73 |||||||||||||||||||||||| Sbjct: 208 ccctcttcttcctcttcctctccc 185
>gb|AC129306.5| Mus musculus BAC clone RP24-178A16 from chromosome 16, complete sequence Length = 167601 Score = 48.1 bits (24), Expect = 0.095 Identities = 24/24 (100%) Strand = Plus / Plus Query: 47 tctccctcttcttcctcttcctct 70 |||||||||||||||||||||||| Sbjct: 119436 tctccctcttcttcctcttcctct 119459
>gb|AC115937.14| Mus musculus chromosome 5, clone RP24-547J21, complete sequence Length = 215400 Score = 48.1 bits (24), Expect = 0.095 Identities = 24/24 (100%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctct 70 |||||||||||||||||||||||| Sbjct: 131160 tctccctcttcttcctcttcctct 131137
>gb|AC113987.11| Mus musculus chromosome 9, clone RP24-106M14, complete sequence Length = 170828 Score = 48.1 bits (24), Expect = 0.095 Identities = 24/24 (100%) Strand = Plus / Plus Query: 47 tctccctcttcttcctcttcctct 70 |||||||||||||||||||||||| Sbjct: 99387 tctccctcttcttcctcttcctct 99410
>gb|AC151834.7| Mus musculus BAC clone RP23-382M10 from chromosome 8, complete sequence Length = 208404 Score = 48.1 bits (24), Expect = 0.095 Identities = 24/24 (100%) Strand = Plus / Plus Query: 47 tctccctcttcttcctcttcctct 70 |||||||||||||||||||||||| Sbjct: 34637 tctccctcttcttcctcttcctct 34660
>gb|AC121820.2| Mus musculus BAC clone RP23-460N4 from 6, complete sequence Length = 178653 Score = 48.1 bits (24), Expect = 0.095 Identities = 24/24 (100%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctct 70 |||||||||||||||||||||||| Sbjct: 35411 tctccctcttcttcctcttcctct 35388
>gb|AC098613.2| Homo sapiens chromosome 3 clone RP11-24F11, complete sequence Length = 185437 Score = 48.1 bits (24), Expect = 0.095 Identities = 27/28 (96%) Strand = Plus / Plus Query: 50 ccctcttcttcctcttcctctcccctcc 77 ||||||||||||||||||||| |||||| Sbjct: 126467 ccctcttcttcctcttcctcttccctcc 126494
>gb|AC104304.2| Homo sapiens chromosome 3 clone RP11-509I21, complete sequence Length = 202933 Score = 48.1 bits (24), Expect = 0.095 Identities = 27/28 (96%) Strand = Plus / Plus Query: 50 ccctcttcttcctcttcctctcccctcc 77 ||||||||||||||||||||| |||||| Sbjct: 2324 ccctcttcttcctcttcctcttccctcc 2351
>gb|AF508798.1| Homo sapiens lactoferrin gene, exons 1 through 6 and partial cds Length = 19899 Score = 48.1 bits (24), Expect = 0.095 Identities = 27/28 (96%) Strand = Plus / Minus Query: 50 ccctcttcttcctcttcctctcccctcc 77 ||||||||||||||||||||| |||||| Sbjct: 4263 ccctcttcttcctcttcctcttccctcc 4236
>gb|AC105327.13| Mus musculus chromosome 8, clone RP24-323I19, complete sequence Length = 215363 Score = 48.1 bits (24), Expect = 0.095 Identities = 24/24 (100%) Strand = Plus / Plus Query: 47 tctccctcttcttcctcttcctct 70 |||||||||||||||||||||||| Sbjct: 120557 tctccctcttcttcctcttcctct 120580
>emb|CT025520.10| Mouse DNA sequence from clone RP23-393E22 on chromosome 16, complete sequence Length = 220149 Score = 48.1 bits (24), Expect = 0.095 Identities = 24/24 (100%) Strand = Plus / Plus Query: 47 tctccctcttcttcctcttcctct 70 |||||||||||||||||||||||| Sbjct: 94305 tctccctcttcttcctcttcctct 94328
>emb|AL591946.14| Mouse DNA sequence from clone RP23-290M7 on chromosome 15, complete sequence Length = 188892 Score = 48.1 bits (24), Expect = 0.095 Identities = 24/24 (100%) Strand = Plus / Plus Query: 51 cctcttcttcctcttcctctcccc 74 |||||||||||||||||||||||| Sbjct: 131917 cctcttcttcctcttcctctcccc 131940
>ref|NM_033090.2| Homo sapiens GREB1 protein (GREB1), transcript variant b, mRNA Length = 2347 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctc 69 ||||||||||||||||||||||| Sbjct: 451 tctccctcttcttcctcttcctc 429
>ref|NM_148903.2| Homo sapiens GREB1 protein (GREB1), transcript variant c, mRNA Length = 2334 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctc 69 ||||||||||||||||||||||| Sbjct: 516 tctccctcttcttcctcttcctc 494
>ref|NM_014668.3| Homo sapiens GREB1 protein (GREB1), transcript variant a, mRNA Length = 8482 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctc 69 ||||||||||||||||||||||| Sbjct: 500 tctccctcttcttcctcttcctc 478
>ref|NM_001067118.1| Oryza sativa (japonica cultivar-group) Os07g0668900 (Os07g0668900) mRNA, complete cds Length = 2191 Score = 46.1 bits (23), Expect = 0.38 Identities = 38/43 (88%) Strand = Plus / Plus Query: 836 actataacgcaaagctctctgattttgggcttgctaagcttgg 878 ||||| || ||||||| ||||||||||||||||| || ||||| Sbjct: 886 actattacccaaagctatctgattttgggcttgcaaaacttgg 928
>ref|NM_001060979.1| Oryza sativa (japonica cultivar-group) Os05g0110900 (Os05g0110900) mRNA, complete cds Length = 2036 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Plus Query: 844 gcaaagctctctgattttgggct 866 ||||||||||||||||||||||| Sbjct: 1206 gcaaagctctctgattttgggct 1228
>ref|XM_515304.2| PREDICTED: Pan troglodytes GREB1 protein, transcript variant 3 (LOC459034), mRNA Length = 8464 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctc 69 ||||||||||||||||||||||| Sbjct: 486 tctccctcttcttcctcttcctc 464
>ref|XM_001159621.1| PREDICTED: Pan troglodytes GREB1 protein, transcript variant 2 (LOC459034), mRNA Length = 8500 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctc 69 ||||||||||||||||||||||| Sbjct: 522 tctccctcttcttcctcttcctc 500
>dbj|AB239392.1| Morella rubra DNA, microsatellite, myrica0186F Length = 276 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 101 gacagggagaggagagggagatg 123 ||||||||||||||||||||||| Sbjct: 229 gacagggagaggagagggagatg 207
>ref|XM_001075987.1| PREDICTED: Rattus norvegicus hypothetical protein LOC686845 (LOC686845), mRNA Length = 966 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 51 cctcttcttcctcttcctctccc 73 ||||||||||||||||||||||| Sbjct: 934 cctcttcttcctcttcctctccc 912
>ref|XM_001078475.1| PREDICTED: Rattus norvegicus hypothetical protein LOC691479 (LOC691479), mRNA Length = 600 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 51 cctcttcttcctcttcctctccc 73 ||||||||||||||||||||||| Sbjct: 568 cctcttcttcctcttcctctccc 546
>ref|XM_001089485.1| PREDICTED: Macaca mulatta similar to GREB1 protein isoform a, transcript variant 3 (LOC697434), mRNA Length = 8453 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctc 69 ||||||||||||||||||||||| Sbjct: 484 tctccctcttcttcctcttcctc 462
>ref|XM_001089374.1| PREDICTED: Macaca mulatta similar to GREB1 protein isoform a, transcript variant 2 (LOC697434), mRNA Length = 8469 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctc 69 ||||||||||||||||||||||| Sbjct: 500 tctccctcttcttcctcttcctc 478
>ref|XM_001089256.1| PREDICTED: Macaca mulatta similar to GREB1 protein isoform a, transcript variant 1 (LOC697434), mRNA Length = 8493 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctc 69 ||||||||||||||||||||||| Sbjct: 524 tctccctcttcttcctcttcctc 502
>gb|AC153607.15| Mus musculus 6 BAC RP23-100I21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222828 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Plus Query: 47 tctccctcttcttcctcttcctc 69 ||||||||||||||||||||||| Sbjct: 43139 tctccctcttcttcctcttcctc 43161
>gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0016H04, complete sequence Length = 176678 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 844 gcaaagctctctgattttgggct 866 ||||||||||||||||||||||| Sbjct: 64268 gcaaagctctctgattttgggct 64246
>gb|AC115933.7| Mus musculus chromosome 3, clone RP24-539I8, complete sequence Length = 187920 Score = 46.1 bits (23), Expect = 0.38 Identities = 26/27 (96%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctctccc 73 |||||||| |||||||||||||||||| Sbjct: 88284 tctccctcctcttcctcttcctctccc 88258
>gb|AC110224.7| Mus musculus chromosome 18, clone RP24-286H12, complete sequence Length = 167379 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Plus Query: 47 tctccctcttcttcctcttcctc 69 ||||||||||||||||||||||| Sbjct: 88362 tctccctcttcttcctcttcctc 88384
>gb|BC071853.1| Homo sapiens cDNA clone IMAGE:6729261, partial cds Length = 1332 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctc 69 ||||||||||||||||||||||| Sbjct: 181 tctccctcttcttcctcttcctc 159
>gb|AC131743.3| Mus musculus BAC clone RP23-68K21 from chromosome 13, complete sequence Length = 235930 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 51 cctcttcttcctcttcctctccc 73 ||||||||||||||||||||||| Sbjct: 135834 cctcttcttcctcttcctctccc 135812
>gb|AC132307.5| Mus musculus BAC clone RP24-291H9 from chromosome 18, complete sequence Length = 179465 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 51 cctcttcttcctcttcctctccc 73 ||||||||||||||||||||||| Sbjct: 10262 cctcttcttcctcttcctctccc 10240
>gb|AC134526.4| Mus musculus BAC clone RP24-500L4 from chromosome 16, complete sequence Length = 124048 Score = 46.1 bits (23), Expect = 0.38 Identities = 26/27 (96%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctctccc 73 ||||||||||||| ||||||||||||| Sbjct: 103245 tctccctcttctttctcttcctctccc 103219
>gb|AC164300.3| Mus musculus BAC clone RP23-310J6 from chromosome 8, complete sequence Length = 200605 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Plus Query: 51 cctcttcttcctcttcctctccc 73 ||||||||||||||||||||||| Sbjct: 84738 cctcttcttcctcttcctctccc 84760
>gb|AC163903.4| Mus musculus BAC clone RP24-314J18 from chromosome 17, complete sequence Length = 197522 Score = 46.1 bits (23), Expect = 0.38 Identities = 26/27 (96%) Strand = Plus / Minus Query: 48 ctccctcttcttcctcttcctctcccc 74 |||| |||||||||||||||||||||| Sbjct: 196510 ctccttcttcttcctcttcctctcccc 196484 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 tcttcttcctcttcctctccc 73 ||||||||||||||||||||| Sbjct: 196429 tcttcttcctcttcctctccc 196409 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 tcttcttcctcttcctctccc 73 ||||||||||||||||||||| Sbjct: 196585 tcttcttcctcttcctctccc 196565
>gb|AC162890.4| Mus musculus chromosome 3, clone RP23-362E13, complete sequence Length = 113095 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctc 69 ||||||||||||||||||||||| Sbjct: 23448 tctccctcttcttcctcttcctc 23426
>gb|AC132427.4| Mus musculus BAC clone RP23-326N11 from chromosome 18, complete sequence Length = 192806 Score = 46.1 bits (23), Expect = 0.38 Identities = 26/27 (96%) Strand = Plus / Minus Query: 51 cctcttcttcctcttcctctcccctcc 77 ||||||||||||||||| ||||||||| Sbjct: 154757 cctcttcttcctcttcccctcccctcc 154731
>gb|AC125349.3| Mus musculus BAC clone RP23-394P9 from chromosome 3, complete sequence Length = 194060 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Plus Query: 47 tctccctcttcttcctcttcctc 69 ||||||||||||||||||||||| Sbjct: 56313 tctccctcttcttcctcttcctc 56335
>gb|AC123842.4| Mus musculus BAC clone RP23-400N18 from chromosome 10, complete sequence Length = 200997 Score = 46.1 bits (23), Expect = 0.38 Identities = 32/35 (91%) Strand = Plus / Plus Query: 42 tccagtctccctcttcttcctcttcctctcccctc 76 |||||||||| ||||||||||||||||| ||||| Sbjct: 158995 tccagtctcctccttcttcctcttcctcttccctc 159029
>gb|AC109364.6| Mus musculus BAC clone RP23-127N24 from chromosome 17, complete sequence Length = 198838 Score = 46.1 bits (23), Expect = 0.38 Identities = 26/27 (96%) Strand = Plus / Plus Query: 48 ctccctcttcttcctcttcctctcccc 74 |||| |||||||||||||||||||||| Sbjct: 124123 ctccttcttcttcctcttcctctcccc 124149 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 tcttcttcctcttcctctccc 73 ||||||||||||||||||||| Sbjct: 124048 tcttcttcctcttcctctccc 124068 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 tcttcttcctcttcctctccc 73 ||||||||||||||||||||| Sbjct: 124204 tcttcttcctcttcctctccc 124224
>gb|AC121956.3| Mus musculus BAC clone RP24-225I19 from chromosome 7, complete sequence Length = 191330 Score = 46.1 bits (23), Expect = 0.38 Identities = 29/31 (93%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctctcccctcc 77 |||||||| ||||||||||||||| |||||| Sbjct: 75542 tctccctcctcttcctcttcctcttccctcc 75512
>gb|AC126032.4| Mus musculus BAC clone RP24-94B12 from chromosome 1, complete sequence Length = 207475 Score = 46.1 bits (23), Expect = 0.38 Identities = 26/27 (96%) Strand = Plus / Plus Query: 51 cctcttcttcctcttcctctcccctcc 77 ||||||||||||||||||| ||||||| Sbjct: 175762 cctcttcttcctcttcctcccccctcc 175788
>gb|AC116138.21| Mus musculus chromosome 10, clone RP23-123D17, complete sequence Length = 219004 Score = 46.1 bits (23), Expect = 0.38 Identities = 26/27 (96%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctctccc 73 ||||||||||||||||| ||||||||| Sbjct: 96467 tctccctcttcttcctcctcctctccc 96441 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctctc 71 ||||||||||||||||| ||||||| Sbjct: 96428 tctccctcttcttcctcctcctctc 96404
>gb|AC116128.15| Mus musculus chromosome 19, clone RP23-95H3, complete sequence Length = 228363 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ctccctcttcttcctcttcctct 70 ||||||||||||||||||||||| Sbjct: 156103 ctccctcttcttcctcttcctct 156081
>gb|AC151904.6| Mus musculus BAC clone RP23-233K6 from chromosome 10, complete sequence Length = 186667 Score = 46.1 bits (23), Expect = 0.38 Identities = 32/35 (91%) Strand = Plus / Plus Query: 42 tccagtctccctcttcttcctcttcctctcccctc 76 |||||||||| ||||||||||||||||| ||||| Sbjct: 60126 tccagtctcctccttcttcctcttcctcttccctc 60160
>gb|AC111145.7| Mus musculus chromosome 1, clone RP23-373L1, complete sequence Length = 165789 Score = 46.1 bits (23), Expect = 0.38 Identities = 26/27 (96%) Strand = Plus / Minus Query: 51 cctcttcttcctcttcctctcccctcc 77 ||||||||||||| ||||||||||||| Sbjct: 126194 cctcttcttcctcctcctctcccctcc 126168
>gb|AC164078.4| Mus musculus chromosome 3, clone RP23-123C15, complete sequence Length = 188095 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 52 ctcttcttcctcttcctctcccc 74 ||||||||||||||||||||||| Sbjct: 97440 ctcttcttcctcttcctctcccc 97418
>gb|AC158910.3| Mus musculus chromosome 1, clone RP23-181P16, complete sequence Length = 195115 Score = 46.1 bits (23), Expect = 0.38 Identities = 26/27 (96%) Strand = Plus / Plus Query: 47 tctccctcttcttcctcttcctctccc 73 ||||||||||||| ||||||||||||| Sbjct: 82368 tctccctcttctttctcttcctctccc 82394
>gb|AC165271.2| Mus musculus BAC clone RP24-424G16 from chromosome 16, complete sequence Length = 165496 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 51 cctcttcttcctcttcctctccc 73 ||||||||||||||||||||||| Sbjct: 143450 cctcttcttcctcttcctctccc 143428
>gb|AC160936.2| Mus musculus BAC clone RP23-300E17 from chromosome 12, complete sequence Length = 198897 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Plus Query: 47 tctccctcttcttcctcttcctc 69 ||||||||||||||||||||||| Sbjct: 174100 tctccctcttcttcctcttcctc 174122
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 46.1 bits (23), Expect = 0.38 Identities = 38/43 (88%) Strand = Plus / Minus Query: 836 actataacgcaaagctctctgattttgggcttgctaagcttgg 878 ||||| || ||||||| ||||||||||||||||| || ||||| Sbjct: 28197908 actattacccaaagctatctgattttgggcttgcaaaacttgg 28197866
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 844 gcaaagctctctgattttgggct 866 ||||||||||||||||||||||| Sbjct: 546869 gcaaagctctctgattttgggct 546847
>emb|BX005040.12| Human DNA sequence from clone RP11-101E5 on chromosome 9 Contains two novel genes, a novel protein similar to chromosome 9 open reading frame 36 (C9orf36), a 6-pyruvoyltetrahydropterin synthase (PTS) pseudogene, the 5' end of a pseudogene similar to part of contactin associated protein-like family, a novel pseudogene and a CpG island, complete sequence Length = 171762 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Plus Query: 53 tcttcttcctcttcctctcccct 75 ||||||||||||||||||||||| Sbjct: 112956 tcttcttcctcttcctctcccct 112978
>emb|BX088645.7| Human DNA sequence from clone RP11-74L19 on chromosome 9 Contains a pseudogene similar to part of contactin associated protein family, a novel pseudogene and a CpG island, complete sequence Length = 152623 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 53 tcttcttcctcttcctctcccct 75 ||||||||||||||||||||||| Sbjct: 100048 tcttcttcctcttcctctcccct 100026
>emb|AL590491.13| Human DNA sequence from clone RP11-144A16 on chromosome 9 Contains a pseudogene similar to part of contactin associated protein family, a novel pseudogene, the gene for a novel protein similar to chromosome 9 open reading frame 36 (C9orf36), two novel genes, a 6-pyruvoyltetrahydropterin synthase (PTS) pseudogene and a CpG island, complete sequence Length = 174366 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 53 tcttcttcctcttcctctcccct 75 ||||||||||||||||||||||| Sbjct: 13933 tcttcttcctcttcctctcccct 13911
>emb|AL392043.21| Human DNA sequence from clone RP11-288G11 on chromosome 10 Contains the 3' end of the INPP5A gene for inositol polyphosphate-5-phosphatase 40kDa, a novel gene, the NKX6-2 gene for NK6 transcription factor related locus 2, a novel gene (DKFZp434A1721), the 3' end of a novel gene and ten CpG islands, complete sequence Length = 208064 Score = 46.1 bits (23), Expect = 0.38 Identities = 26/27 (96%) Strand = Plus / Minus Query: 48 ctccctcttcttcctcttcctctcccc 74 |||||||||||||||||| |||||||| Sbjct: 31988 ctccctcttcttcctctttctctcccc 31962
>emb|AL162501.11| Human DNA sequence from clone RP11-138L21 on chromosome 9 Contains the 5' end of the CNTNAP3 gene for a contactin associated protein-like 3 and two CpG islands, complete sequence Length = 118564 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Plus Query: 53 tcttcttcctcttcctctcccct 75 ||||||||||||||||||||||| Sbjct: 19723 tcttcttcctcttcctctcccct 19745
>emb|AL162233.14| Human DNA sequence from clone RP11-292B8 on chromosome 9 Contains a pseudogene similar to part of contactin associated protein-like 3 (CNTNAP3), an RNA binding motif protein 17 (RBM17) pseudogene and a CpG island, complete sequence Length = 179833 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Plus Query: 53 tcttcttcctcttcctctcccct 75 ||||||||||||||||||||||| Sbjct: 24856 tcttcttcctcttcctctcccct 24878
>emb|Z98056.2|SPAC5D6 S.pombe chromosome I cosmid c5D6 Length = 21852 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Plus Query: 53 tcttcttcctcttcctctcccct 75 ||||||||||||||||||||||| Sbjct: 4987 tcttcttcctcttcctctcccct 5009
>gb|AC079022.2|AC079022 Oryza sativa chromosome 5 clone P0574H01, complete sequence Length = 151589 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 844 gcaaagctctctgattttgggct 866 ||||||||||||||||||||||| Sbjct: 146667 gcaaagctctctgattttgggct 146645
>gb|AC119867.11| Mus musculus chromosome 1, clone RP23-411L6, complete sequence Length = 215781 Score = 46.1 bits (23), Expect = 0.38 Identities = 26/27 (96%) Strand = Plus / Plus Query: 47 tctccctcttcttcctcttcctctccc 73 ||||||||||||| ||||||||||||| Sbjct: 192246 tctccctcttctttctcttcctctccc 192272
>gb|AF245390.1|AF245390 Homo sapiens GREB1c (GREB1) mRNA, complete cds, alternatively spliced Length = 2337 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctc 69 ||||||||||||||||||||||| Sbjct: 516 tctccctcttcttcctcttcctc 494
>gb|AF245389.1|AF245389 Homo sapiens GREB1b (GREB1) mRNA, complete cds, alternatively spliced Length = 2347 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctc 69 ||||||||||||||||||||||| Sbjct: 451 tctccctcttcttcctcttcctc 429
>gb|AF245388.1|AF245388 Homo sapiens GREB1a (GREB1) mRNA, partial cds, alternatively spliced Length = 3305 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctc 69 ||||||||||||||||||||||| Sbjct: 500 tctccctcttcttcctcttcctc 478
>dbj|AP004570.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0625E02 Length = 153921 Score = 46.1 bits (23), Expect = 0.38 Identities = 38/43 (88%) Strand = Plus / Minus Query: 836 actataacgcaaagctctctgattttgggcttgctaagcttgg 878 ||||| || ||||||| ||||||||||||||||| || ||||| Sbjct: 53453 actattacccaaagctatctgattttgggcttgcaaaacttgg 53411
>gb|AC011994.10| Homo sapiens BAC clone RP11-50E1 from 2, complete sequence Length = 176933 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Plus Query: 47 tctccctcttcttcctcttcctc 69 ||||||||||||||||||||||| Sbjct: 80941 tctccctcttcttcctcttcctc 80963
>dbj|AK119572.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-A11, full insert sequence Length = 1965 Score = 46.1 bits (23), Expect = 0.38 Identities = 38/43 (88%) Strand = Plus / Plus Query: 836 actataacgcaaagctctctgattttgggcttgctaagcttgg 878 ||||| || ||||||| ||||||||||||||||| || ||||| Sbjct: 861 actattacccaaagctatctgattttgggcttgcaaaacttgg 903
>dbj|AK073169.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033020B11, full insert sequence Length = 2039 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Plus Query: 844 gcaaagctctctgattttgggct 866 ||||||||||||||||||||||| Sbjct: 1207 gcaaagctctctgattttgggct 1229
>dbj|AK067054.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092F03, full insert sequence Length = 2192 Score = 46.1 bits (23), Expect = 0.38 Identities = 38/43 (88%) Strand = Plus / Plus Query: 836 actataacgcaaagctctctgattttgggcttgctaagcttgg 878 ||||| || ||||||| ||||||||||||||||| || ||||| Sbjct: 887 actattacccaaagctatctgattttgggcttgcaaaacttgg 929
>gb|AC165322.12| Mus musculus chromosome 1, clone RP23-127J15, complete sequence Length = 185278 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Plus Query: 51 cctcttcttcctcttcctctccc 73 ||||||||||||||||||||||| Sbjct: 69303 cctcttcttcctcttcctctccc 69325
>gb|AC103353.7| Mus musculus chromosome 12, clone RP23-450G14, complete sequence Length = 191903 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctc 69 ||||||||||||||||||||||| Sbjct: 113171 tctccctcttcttcctcttcctc 113149
>dbj|AP003154.2| Mus musculus genomic DN, chromosome 16 clone:RP21-564B5, complete sequence Length = 111402 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Plus Query: 51 cctcttcttcctcttcctctccc 73 ||||||||||||||||||||||| Sbjct: 67995 cctcttcttcctcttcctctccc 68017
>dbj|AP003153.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-485C23, complete sequences Length = 156444 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Plus Query: 51 cctcttcttcctcttcctctccc 73 ||||||||||||||||||||||| Sbjct: 4023 cctcttcttcctcttcctctccc 4045
>gb|AY106357.1| Zea mays PCO078250 mRNA sequence Length = 2030 Score = 46.1 bits (23), Expect = 0.38 Identities = 59/71 (83%) Strand = Plus / Plus Query: 796 taccgtgacttcaaggcttccaagattcttctagatgcacactataacgcaaagctctct 855 ||||||||||||||| | || || | ||||||||||| ||| || |||||||||||| Sbjct: 1126 taccgtgacttcaagacatctaatgtccttctagatgcgaacttcaatgcaaagctctct 1185 Query: 856 gattttgggct 866 ||||| ||||| Sbjct: 1186 gatttcgggct 1196
>gb|AC117831.6| Mus musculus chromosome 15, clone RP24-106E17, complete sequence Length = 173772 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 51 cctcttcttcctcttcctctccc 73 ||||||||||||||||||||||| Sbjct: 51352 cctcttcttcctcttcctctccc 51330
>emb|AL772280.10| Mouse DNA sequence from clone RP23-97P11 on chromosome 4, complete sequence Length = 152145 Score = 46.1 bits (23), Expect = 0.38 Identities = 29/31 (93%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctctcccctcc 77 |||||||||||| ||||| |||||||||||| Sbjct: 129324 tctccctcttctacctctccctctcccctcc 129294
>emb|BX005192.7| Human DNA sequence from clone RP11-211N15 on chromosome 9, complete sequence Length = 163795 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 53 tcttcttcctcttcctctcccct 75 ||||||||||||||||||||||| Sbjct: 3446 tcttcttcctcttcctctcccct 3424
>emb|CT030190.9| Mouse DNA sequence from clone RP23-115D20 on chromosome 16, complete sequence Length = 228196 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Plus Query: 51 cctcttcttcctcttcctctccc 73 ||||||||||||||||||||||| Sbjct: 190538 cctcttcttcctcttcctctccc 190560
>gb|AC132449.4| Mus musculus BAC clone RP23-183J18 from 8, complete sequence Length = 206312 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 51 cctcttcttcctcttcctctccc 73 ||||||||||||||||||||||| Sbjct: 45077 cctcttcttcctcttcctctccc 45055
>emb|BX005035.9| Human DNA sequence from clone RP11-133G22 on chromosome 9, complete sequence Length = 146143 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Plus Query: 53 tcttcttcctcttcctctcccct 75 ||||||||||||||||||||||| Sbjct: 28373 tcttcttcctcttcctctcccct 28395
>emb|AL731670.13| Mouse DNA sequence from clone RP23-463E7 on chromosome 11, complete sequence Length = 198411 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Plus Query: 47 tctccctcttcttcctcttcctc 69 ||||||||||||||||||||||| Sbjct: 142240 tctccctcttcttcctcttcctc 142262
>emb|AL662895.7| Mouse DNA sequence from clone RP23-340L19 on chromosome 11, complete sequence Length = 214811 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 51 cctcttcttcctcttcctctccc 73 ||||||||||||||||||||||| Sbjct: 138894 cctcttcttcctcttcctctccc 138872
>emb|AL627130.13| Mouse DNA sequence from clone RP23-442A20 on chromosome 4, complete sequence Length = 185761 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 51 cctcttcttcctcttcctctccc 73 ||||||||||||||||||||||| Sbjct: 36409 cctcttcttcctcttcctctccc 36387
>emb|AL807400.9| Mouse DNA sequence from clone RP23-196A4 on chromosome 2, complete sequence Length = 220579 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctc 69 ||||||||||||||||||||||| Sbjct: 214966 tctccctcttcttcctcttcctc 214944
>emb|AL645563.12| Mouse DNA sequence from clone RP23-132L14 on chromosome 4, complete sequence Length = 214456 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctc 69 ||||||||||||||||||||||| Sbjct: 147969 tctccctcttcttcctcttcctc 147947
>emb|AL513351.26| Mouse DNA sequence from clone RP23-122P5 on chromosome 1, complete sequence Length = 224628 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Plus Query: 51 cctcttcttcctcttcctctccc 73 ||||||||||||||||||||||| Sbjct: 215583 cctcttcttcctcttcctctccc 215605
>ref|XR_026185.1| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC586079 (LOC586079), mRNA Length = 1668 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 1495 cctcttcttcctcttcctctcc 1474
>ref|XM_001191890.1| PREDICTED: Strongylocentrotus purpuratus similar to Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) (LOC580362), partial mRNA Length = 1621 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 1448 cctcttcttcctcttcctctcc 1427
>ref|XR_025844.1| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC586079 (LOC586079), mRNA Length = 1668 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 1495 cctcttcttcctcttcctctcc 1474
>ref|XM_780425.2| PREDICTED: Strongylocentrotus purpuratus similar to Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) (LOC580362), partial mRNA Length = 1621 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 1448 cctcttcttcctcttcctctcc 1427
>gb|AC189270.1| Brassica rapa subsp. pekinensis clone KBrB023F24, complete sequence Length = 160087 Score = 44.1 bits (22), Expect = 1.5 Identities = 52/62 (83%) Strand = Plus / Plus Query: 802 gacttcaaggcttccaagattcttctagatgcacactataacgcaaagctctctgatttt 861 |||||||| ||||||| |||||||| |||| ||| ||||||||||||||||| ||| Sbjct: 88031 gacttcaaatcttccaatattcttcttgatgagaactggaacgcaaagctctctgacttt 88090 Query: 862 gg 863 || Sbjct: 88091 gg 88092
>gb|BC113195.1| Mus musculus RIKEN cDNA 6230416A05 gene, mRNA (cDNA clone MGC:132994 IMAGE:40062490), complete cds Length = 2083 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 47 tctccctcttcttcctcttcct 68 |||||||||||||||||||||| Sbjct: 1569 tctccctcttcttcctcttcct 1590
>emb|CT984274.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 884 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 844 gcaaagctctctgattttgggcttgc 869 ||||||||||| |||||||||||||| Sbjct: 602 gcaaagctctcagattttgggcttgc 577
>emb|CT573087.13| Mouse DNA sequence from clone RP24-177E24 on chromosome 9, complete sequence Length = 124393 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 56 tcttcctcttcctctcccctcc 77 |||||||||||||||||||||| Sbjct: 73256 tcttcctcttcctctcccctcc 73235
>ref|NM_112345.2| Arabidopsis thaliana ATP binding / protein binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase (AT3G14840) mRNA, complete cds Length = 3134 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 856 gattttgggcttgctaagcttg 877 |||||||||||||||||||||| Sbjct: 2350 gattttgggcttgctaagcttg 2371
>gb|AC167243.3| Mus musculus BAC clone RP24-144E2 from chromosome 9, complete sequence Length = 193364 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Minus Query: 41 ctccagtctccctcttcttcctcttcctct 70 |||||||||||||| || |||||||||||| Sbjct: 19839 ctccagtctccctcctcctcctcttcctct 19810
>gb|AC167970.4| Mus musculus BAC clone RP24-471H15 from chromosome 7, complete sequence Length = 238950 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 97387 cctcttcttcctcttcctctcc 97408
>gb|AC164883.5| Mus musculus BAC clone RP23-88A20 from chromosome 15, complete sequence Length = 260402 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 47 tctccctcttcttcctcttcctctcc 72 ||||| |||||||||||||||||||| Sbjct: 52229 tctccttcttcttcctcttcctctcc 52254
>gb|AC168054.4| Mus musculus BAC clone RP24-571H12 from chromosome 9, complete sequence Length = 136974 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 128093 cctcttcttcctcttcctctcc 128114
>gb|AC131995.14| Mus musculus chromosome 1, clone RP24-338G10, complete sequence Length = 153731 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 tccctcttcttcctcttcctct 70 |||||||||||||||||||||| Sbjct: 7358 tccctcttcttcctcttcctct 7337
>gb|AC169503.1| Mus musculus BAC clone RP24-281B5 from chromosome 12, complete sequence Length = 163008 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 56 tcttcctcttcctctcccctcc 77 |||||||||||||||||||||| Sbjct: 145905 tcttcctcttcctctcccctcc 145926
>gb|AC137848.31| Mus musculus chromosome 9, clone RP24-118I23, complete sequence Length = 190317 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 41 ctccagtctccctcttcttcctcttcctct 70 |||||||||||||| || |||||||||||| Sbjct: 150716 ctccagtctccctcctcctcctcttcctct 150745
>gb|AC149635.1| Genomic sequence for broccoli [Brassica oleracea L. (Italica group)] BAC clone B19N3, complete sequence Length = 96718 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 52345 cctcttcttcctcttcctctcc 52366
>gb|AC133871.13| Mus musculus chromosome 1, clone RP24-414I11, complete sequence Length = 203423 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 48 ctccctcttcttcctcttcctctccc 73 |||| ||||||||||||||||||||| Sbjct: 75726 ctccttcttcttcctcttcctctccc 75751
>gb|AC123708.17| Mus musculus chromosome 9, clone RP23-366E1, complete sequence Length = 195563 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Minus Query: 41 ctccagtctccctcttcttcctcttcctct 70 |||||||||||||| || |||||||||||| Sbjct: 184950 ctccagtctccctcctcctcctcttcctct 184921
>gb|AC114619.9| Mus musculus chromosome 5, clone RP24-86I23, complete sequence Length = 204468 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 56 tcttcctcttcctctcccctcc 77 |||||||||||||||||||||| Sbjct: 38286 tcttcctcttcctctcccctcc 38265
>gb|AC121827.3| Mus musculus BAC clone RP23-476B3 from chromosome 7, complete sequence Length = 183470 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctctcccctc 76 ||||| ||||||||||||||||||| |||| Sbjct: 69485 tctccatcttcttcctcttcctctctcctc 69456
>gb|BC065166.1| Mus musculus sorting nexin 26, mRNA (cDNA clone MGC:90030 IMAGE:6836510), complete cds Length = 4425 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 3716 cctcttcttcctcttcctctcc 3737
>ref|NM_178252.2| Mus musculus sorting nexin 26 (Snx26), mRNA gb|BC065086.1| Mus musculus sorting nexin 26, mRNA (cDNA clone MGC:86107 IMAGE:6850475), complete cds Length = 4415 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 3718 cctcttcttcctcttcctctcc 3739
>gb|AC116412.19| Mus musculus chromosome 5, clone RP24-82A20, complete sequence Length = 191823 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 48 ctccctcttcttcctcttcctctccc 73 ||||| |||||||||||||||||||| Sbjct: 18520 ctcccccttcttcctcttcctctccc 18495
>gb|AC124749.5| Mus musculus BAC clone RP23-262G23 from chromosome 5, complete sequence Length = 209986 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 tccctcttcttcctcttcctct 70 |||||||||||||||||||||| Sbjct: 101595 tccctcttcttcctcttcctct 101574
>gb|AC130719.3| Mus musculus BAC clone RP24-107M5 from chromosome 7, complete sequence Length = 143584 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 47 tctccctcttcttcctcttcctctcccctc 76 ||||| ||||||||||||||||||| |||| Sbjct: 21286 tctccatcttcttcctcttcctctctcctc 21315
>gb|AC140232.2| Mus musculus BAC clone RP24-498F17 from chromosome 5, complete sequence Length = 183612 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 259 cctcttcttcctcttcctctcc 280
>gb|AC163690.4| Mus musculus BAC clone RP23-470F9 from chromosome 1, complete sequence Length = 210131 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 tccctcttcttcctcttcctct 70 |||||||||||||||||||||| Sbjct: 105237 tccctcttcttcctcttcctct 105216
>gb|AC023175.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-69B14, complete sequence Length = 195667 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 tcttcttcctcttcctctcccc 74 |||||||||||||||||||||| Sbjct: 130405 tcttcttcctcttcctctcccc 130426
>gb|AC112956.12| Mus musculus chromosome 9, clone RP23-412P4, complete sequence Length = 197841 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 52 ctcttcttcctcttcctctccc 73 |||||||||||||||||||||| Sbjct: 42824 ctcttcttcctcttcctctccc 42803
>gb|BC066047.1| Mus musculus sorting nexin 26, mRNA (cDNA clone MGC:90125 IMAGE:6822191), complete cds Length = 4432 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 3694 cctcttcttcctcttcctctcc 3715
>gb|AC142453.3| Mus musculus BAC clone RP23-398A2 from chromosome 7, complete sequence Length = 188249 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 47 tctccctcttcttcctcttcctctcccctc 76 ||||| ||||||||||||||||||| |||| Sbjct: 33051 tctccatcttcttcctcttcctctctcctc 33080
>gb|AC140433.3| Mus musculus BAC clone RP23-96L16 from chromosome 16, complete sequence Length = 231593 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 53 tcttcttcctcttcctctcccc 74 |||||||||||||||||||||| Sbjct: 192957 tcttcttcctcttcctctcccc 192936
>gb|AC095326.9| Rattus norvegicus 1 BAC CH230-89E14 (Children's Hospital Oakland Research Institute) complete sequence Length = 219914 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ctccctcttcttcctcttcctc 69 |||||||||||||||||||||| Sbjct: 86525 ctccctcttcttcctcttcctc 86546
>gb|AC125163.5| Mus musculus BAC clone RP24-421J9 from chromosome 1, complete sequence Length = 184034 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 53409 cctcttcttcctcttcctctcc 53388 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 53432 cctcttcttcctcttcctctcc 53411
>gb|AC124171.3| Mus musculus BAC clone RP23-167E23 from chromosome 13, complete sequence Length = 198242 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcct 68 |||||||||||||||||||||| Sbjct: 81351 tctccctcttcttcctcttcct 81330
>gb|BC061471.1| Mus musculus sorting nexin 26, mRNA (cDNA clone MGC:67222 IMAGE:5698780), complete cds Length = 3646 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 2946 cctcttcttcctcttcctctcc 2967
>gb|AC121818.3| Mus musculus BAC clone RP23-459J16 from chromosome 16, complete sequence Length = 199539 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 53 tcttcttcctcttcctctcccc 74 |||||||||||||||||||||| Sbjct: 99390 tcttcttcctcttcctctcccc 99369
>gb|AC122914.4| Mus musculus BAC clone RP23-26F9 from 15, complete sequence Length = 207417 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 78569 cctcttcttcctcttcctctcc 78548
>gb|AC126273.3| Mus musculus BAC clone RP23-99P15 from 7, complete sequence Length = 182698 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctctcccctc 76 ||||| ||||||||||||||||||| |||| Sbjct: 150835 tctccatcttcttcctcttcctctctcctc 150806
>gb|AC124545.4| Mus musculus BAC clone RP23-272D9 from 7, complete sequence Length = 169442 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctctcccctc 76 ||||| ||||||||||||||||||| |||| Sbjct: 7027 tctccatcttcttcctcttcctctctcctc 6998 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctctcccctc 76 ||||| ||||||||||||||||||| |||| Sbjct: 81002 tctccatcttcttcctcttcctctctcctc 80973 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctctcccctc 76 ||||| ||||||||||||||||||| |||| Sbjct: 125927 tctccatcttcttcctcttcctctctcctc 125898
>gb|AC122296.4| Mus musculus BAC clone RP23-265P8 from 6, complete sequence Length = 211697 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 47 tctccctcttcttcctcttcctctcc 72 ||||||||||||||||| |||||||| Sbjct: 143397 tctccctcttcttcctcctcctctcc 143422
>gb|AC087329.10| Mus Musculus Strain C57BL6/J chromosome 5 BAC, RP23-383N15, Complete Sequence, complete sequence Length = 219559 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 177484 cctcttcttcctcttcctctcc 177505
>gb|AC116582.3| Mus musculus BAC clone RP23-340C13 from 9, complete sequence Length = 214625 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 70241 cctcttcttcctcttcctctcc 70220
>gb|AC165355.3| Mus musculus BAC clone RP23-129P10 from chromosome 6, complete sequence Length = 199100 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctctcc 72 ||||||||||||||||| |||||||| Sbjct: 198771 tctccctcttcttcctcctcctctcc 198746
>gb|AC148981.7| Mus musculus BAC clone RP23-201L15 from chromosome 7, complete sequence Length = 223522 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 49 tccctcttcttcctcttcctct 70 |||||||||||||||||||||| Sbjct: 199357 tccctcttcttcctcttcctct 199378
>gb|AC158948.3| Mus musculus chromosome 1, clone RP24-263I3, complete sequence Length = 201046 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 48 ctccctcttcttcctcttcctctccc 73 |||| ||||||||||||||||||||| Sbjct: 86274 ctccttcttcttcctcttcctctccc 86249
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 Length = 2661830 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 56 tcttcctcttcctctcccctcc 77 |||||||||||||||||||||| Sbjct: 2602951 tcttcctcttcctctcccctcc 2602972
>gb|AY217764.1| Mus musculus TC10/CDC42 GTPase-activating protein mRNA, complete cds; alternatively spliced Length = 3918 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 3602 cctcttcttcctcttcctctcc 3623
>gb|AC162287.4| Mus musculus chromosome 7, clone RP24-243J4, complete sequence Length = 152934 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 95374 cctcttcttcctcttcctctcc 95395
>gb|AC164558.2| Mus musculus BAC clone RP23-238F5 from chromosome 16, complete sequence Length = 186421 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 71544 cctcttcttcctcttcctctcc 71523
>gb|AC163619.2| Mus musculus BAC clone RP24-164P4 from chromosome 9, complete sequence Length = 161793 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 56 tcttcctcttcctctcccctcc 77 |||||||||||||||||||||| Sbjct: 153391 tcttcctcttcctctcccctcc 153370
>dbj|AK134270.1| Mus musculus 13 days embryo forelimb cDNA, RIKEN full-length enriched library, clone:5930424O07 product:unclassifiable, full insert sequence Length = 3818 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctctcc 72 ||||| |||||||||||||||||||| Sbjct: 2208 tctccttcttcttcctcttcctctcc 2183
>dbj|AK142180.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330006E09 product:sorting nexin 26, full insert sequence Length = 4338 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 3660 cctcttcttcctcttcctctcc 3681
>gb|AC044792.6| Homo sapiens chromosome 19 clone CTC-258N23, complete sequence Length = 201939 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 91075 cctcttcttcctcttcctctcc 91096
>gb|AC011490.7| Homo sapiens chromosome 19 clone CTB-179L3, complete sequence Length = 115289 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 47 tctccctcttcttcctcttcctctcc 72 ||||| |||||||||||||||||||| Sbjct: 77371 tctccttcttcttcctcttcctctcc 77396
>gb|AC027250.8| Homo sapiens chromosome 8, clone RP11-793H4, complete sequence Length = 174466 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 95433 cctcttcttcctcttcctctcc 95412
>emb|CT009550.5| Mouse DNA sequence from clone RP23-38F20 on chromosome 14, complete sequence Length = 229049 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 50 ccctcttcttcctcttcctctc 71 |||||||||||||||||||||| Sbjct: 124658 ccctcttcttcctcttcctctc 124679
>gb|AC004553.1| Homo sapiens X GSHB-223P11 (Genome Systems Human BAC library) complete sequence Length = 80659 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 32188 cctcttcttcctcttcctctcc 32209
>gb|AC027287.21| Homo sapiens 12 BAC RP11-616L12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 202703 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 49 tccctcttcttcctcttcctctcccc 74 ||||| |||||||||||||||||||| Sbjct: 105793 tcccttttcttcctcttcctctcccc 105768
>gb|AC093118.2| Homo sapiens chromosome 1 clone RP11-156K6, complete sequence Length = 142816 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 62878 cctcttcttcctcttcctctcc 62899
>ref|XM_689725.1| PREDICTED: Danio rerio similar to jagged2 (LOC566455), mRNA Length = 4419 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 46 gtctccctcttcttcctcttcctctc 71 |||||||||||| ||||||||||||| Sbjct: 4227 gtctccctcttcctcctcttcctctc 4202
>ref|XM_689113.1| PREDICTED: Danio rerio similar to nardilysin (N-arginine dibasic convertase) (LOC565850), mRNA Length = 3936 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 45 agtctccctcttcttcctcttcctct 70 |||||||||||||||||||| ||||| Sbjct: 322 agtctccctcttcttcctctccctct 297
>gb|AC158525.2| Mus musculus BAC clone RP23-367E3 from chromosome 14, complete sequence Length = 179650 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 24813 cctcttcttcctcttcctctcc 24792
>gb|AC026811.5| Homo sapiens chromosome 5 clone RP3_474K3, complete sequence Length = 159147 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctctcc 72 |||||||||||||| ||||||||||| Sbjct: 17755 tctccctcttcttcttcttcctctcc 17730
>gb|AC021078.5| Homo sapiens chromosome 5 clone CTB-89H12, complete sequence Length = 145050 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 18489 cctcttcttcctcttcctctcc 18468
>gb|AC158596.7| Mus musculus 10 BAC RP23-188F7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207673 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcct 68 |||||||||||||||||||||| Sbjct: 43097 tctccctcttcttcctcttcct 43076
>dbj|AP008227.1| Thermus thermophilus HB8 plasmid pTT27 DNA, complete sequence Length = 256992 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 44 cagtctccctcttcttcctcttcctc 69 ||||| |||||||||||||||||||| Sbjct: 238072 cagtccccctcttcttcctcttcctc 238047
>dbj|AP002061.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: T21E2 Length = 47466 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 856 gattttgggcttgctaagcttg 877 |||||||||||||||||||||| Sbjct: 36591 gattttgggcttgctaagcttg 36612
>gb|AC103591.3| Homo sapiens chromosome 1 clone RP11-386I14, complete sequence Length = 152117 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 20782 cctcttcttcctcttcctctcc 20761
>gb|AC090430.7| Mus Musculus Strain C57BL6/J chromosome 10 BAC, RP23-131G5, complete sequence Length = 185453 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 cctcttcttcctcttcctctcccctc 76 ||||||||||||||||| |||||||| Sbjct: 141792 cctcttcttcctcttcccctcccctc 141767
>gb|DQ271695.1| Mustela vison clone XI1B22 genomic sequence Length = 583 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 111 cctcttcttcctcttcctctcc 90
>gb|AC107815.11| Mus musculus chromosome 7, clone RP23-114A6, complete sequence Length = 228068 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 7823 cctcttcttcctcttcctctcc 7802
>gb|AC113458.10| Mus musculus chromosome 3, clone RP23-372O21, complete sequence Length = 232529 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 102597 cctcttcttcctcttcctctcc 102618
>emb|BX470229.4| Zebrafish DNA sequence from clone DKEY-193B15 in linkage group 2, complete sequence Length = 241018 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 45 agtctccctcttcttcctcttcctct 70 |||||||||||||||||||| ||||| Sbjct: 229873 agtctccctcttcttcctctccctct 229898
>emb|BX539312.7| Mouse DNA sequence from clone RP24-164C21 on chromosome 7, complete sequence Length = 123224 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 47 tctccctcttcttcctcttcctctcccctc 76 ||||| ||||||||||||||||||| |||| Sbjct: 57834 tctccatcttcttcctcttcctctctcctc 57863
>emb|BX005372.6| Zebrafish DNA sequence from clone DKEY-76K16, complete sequence Length = 199736 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 46 gtctccctcttcttcctcttcctctc 71 |||||||||||| ||||||||||||| Sbjct: 134271 gtctccctcttcctcctcttcctctc 134296
>emb|AL845357.6| Zebrafish DNA sequence from clone DKEY-202M22 in linkage group 20, complete sequence Length = 221012 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 67354 cctcttcttcctcttcctctcc 67375
>gb|AC127686.4| Mus musculus BAC clone RP24-188G23 from 3, complete sequence Length = 173474 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 69257 cctcttcttcctcttcctctcc 69278
>gb|BC072464.1| Rattus norvegicus NSFL1 (p97) cofactor (p47), mRNA (cDNA clone MGC:91611 IMAGE:7096463), complete cds Length = 1383 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 tccctcttcttcctcttcctct 70 |||||||||||||||||||||| Sbjct: 278 tccctcttcttcctcttcctct 257
>emb|Y10769.1|RNXY40 R.norvegicus XY40 mRNA Length = 1365 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 tccctcttcttcctcttcctct 70 |||||||||||||||||||||| Sbjct: 278 tccctcttcttcctcttcctct 257
>gb|AC161242.2| Mus musculus BAC clone RP24-200E4 from chromosome 12, complete sequence Length = 179665 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 56 tcttcctcttcctctcccctcc 77 |||||||||||||||||||||| Sbjct: 175513 tcttcctcttcctctcccctcc 175492
>gb|AC172890.2| Mus musculus BAC clone RP24-337A4 from chromosome 7, complete sequence Length = 182879 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctctcccctc 76 ||||| ||||||||||||||||||| |||| Sbjct: 12609 tctccatcttcttcctcttcctctctcctc 12580
>gb|AE017222.1| Thermus thermophilus HB27 plasmid pTT27, complete sequence Length = 232605 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 44 cagtctccctcttcttcctcttcctc 69 ||||| |||||||||||||||||||| Sbjct: 202188 cagtccccctcttcttcctcttcctc 202163
>emb|CT025657.12| Mouse DNA sequence from clone RP23-342N19 on chromosome 9, complete sequence Length = 202383 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ctccctcttcttcctcttcctc 69 |||||||||||||||||||||| Sbjct: 108282 ctccctcttcttcctcttcctc 108303
>emb|AL807807.11| Mouse DNA sequence from clone RP23-284L15 on chromosome 4, complete sequence Length = 171570 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 47 tctccctcttcttcctcttcctctcc 72 |||||||| ||||||||||||||||| Sbjct: 99329 tctccctcatcttcctcttcctctcc 99354
>gb|AC127238.5| Mus musculus BAC clone RP24-378P20 from 7, complete sequence Length = 224224 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctctcccctc 76 ||||| ||||||||||||||||||| |||| Sbjct: 72143 tctccatcttcttcctcttcctctctcctc 72114
>gb|AC150681.2| Mus musculus BAC clone RP24-490A22 from 7, complete sequence Length = 195652 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 tccctcttcttcctcttcctct 70 |||||||||||||||||||||| Sbjct: 187572 tccctcttcttcctcttcctct 187551
>gb|AC131802.4| Mus musculus BAC clone RP24-542I6 from 7, complete sequence Length = 174956 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 47 tctccctcttcttcctcttcctctcccctc 76 ||||| ||||||||||||||||||| |||| Sbjct: 99745 tctccatcttcttcctcttcctctctcctc 99774
>gb|AC004791.1|AC004791 Homo sapiens chromosome 19, cosmid R26420, complete sequence Length = 43772 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctctcc 72 |||||||||||||||||||| ||||| Sbjct: 10911 tctccctcttcttcctcttcttctcc 10886
>gb|AC173484.2| Mus musculus BAC clone RP23-250N1 from chromosome 7, complete sequence Length = 207692 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctctcccctc 76 ||||| ||||||||||||||||||| |||| Sbjct: 158744 tctccatcttcttcctcttcctctctcctc 158715
>emb|AL772271.11| Mouse DNA sequence from clone RP23-17P12 on chromosome 2, complete sequence Length = 204136 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 50 ccctcttcttcctcttcctctcccct 75 |||||| ||||||||||||||||||| Sbjct: 38210 ccctctccttcctcttcctctcccct 38185
>gb|AC150684.2| Mus musculus BAC clone RP23-268G6 from 7, complete sequence Length = 193525 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctctcccctc 76 ||||| ||||||||||||||||||| |||| Sbjct: 176093 tctccatcttcttcctcttcctctctcctc 176064
>gb|AC003051.1|AC003051 Homo sapiens chromosome 17, clone 289A8, complete sequence Length = 120387 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 44 cagtctccctcttcttcctcttcctc 69 |||||| ||||||||||||||||||| Sbjct: 24443 cagtcttcctcttcttcctcttcctc 24418
>gb|AC149609.5| Mus musculus BAC clone RP23-442K4 from 7, complete sequence Length = 196912 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 47578 cctcttcttcctcttcctctcc 47557
>gb|AC173478.1| Mus musculus BAC clone RP24-81N9 from chromosome 7, complete sequence Length = 208133 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Minus Query: 47 tctccctcttcttcctcttcctctcccctc 76 ||||| ||||||||||||||||||| |||| Sbjct: 207963 tctccatcttcttcctcttcctctctcctc 207934
>emb|AL845367.6| Zebrafish DNA sequence from clone DKEYP-33D4 in linkage group 20, complete sequence Length = 104646 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 42077 cctcttcttcctcttcctctcc 42056
>emb|AL627205.12| Mouse DNA sequence from clone RP23-41E14 on chromosome 11, complete sequence Length = 223794 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 60858 cctcttcttcctcttcctctcc 60879
>emb|AL645471.8| Mouse DNA sequence from clone RP23-456M3 on chromosome 11, complete sequence Length = 178361 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 47 tctccctcttcttcctcttcctctcc 72 |||||||||||| ||||||||||||| Sbjct: 114164 tctccctcttctccctcttcctctcc 114189
>gb|AC171001.2| Mus musculus BAC clone RP23-317I13 from chromosome 7, complete sequence Length = 183576 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 47 tctccctcttcttcctcttcctctcccctc 76 ||||| ||||||||||||||||||| |||| Sbjct: 13607 tctccatcttcttcctcttcctctctcctc 13636
>gb|AC153955.3| Mus musculus 10 BAC RP24-167A12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 154271 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 47 tctccctcttcttcctcttcct 68 |||||||||||||||||||||| Sbjct: 58603 tctccctcttcttcctcttcct 58624
>ref|NM_031981.1| Rattus norvegicus NSFL1 (p97) cofactor (p47) (Nsfl1c), mRNA dbj|AB002086.1| Rattus norvegicus mRNA for p47, complete cds Length = 1451 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 tccctcttcttcctcttcctct 70 |||||||||||||||||||||| Sbjct: 381 tccctcttcttcctcttcctct 360
>emb|AL645668.15| Mouse DNA sequence from clone RP23-32L21 on chromosome 4, complete sequence Length = 143213 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 cctcttcttcctcttcctctcc 72 |||||||||||||||||||||| Sbjct: 76709 cctcttcttcctcttcctctcc 76730
>gb|CP000471.1| Magnetococcus sp. MC-1, complete genome Length = 4719581 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 241 agcagcagtgccgccaccagc 261 ||||||||||||||||||||| Sbjct: 186969 agcagcagtgccgccaccagc 186949
>gb|AC187126.2| Pan troglodytes BAC clone CH251-422F11 from chromosome unknown, complete sequence Length = 192530 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 ctcttcttcctcttcctctcc 72 ||||||||||||||||||||| Sbjct: 146402 ctcttcttcctcttcctctcc 146422
>emb|CR855224.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0132E09-OSIGBa0108L24, complete sequence Length = 130140 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1298 tacatttgtaagcatgttgaa 1318 ||||||||||||||||||||| Sbjct: 113576 tacatttgtaagcatgttgaa 113556
>ref|XM_001193472.1| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC590218 (LOC590218), mRNA Length = 1068 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 51 cctcttcttcctcttcctctcccct 75 |||||||||||||||||||| |||| Sbjct: 43 cctcttcttcctcttcctcttccct 19
>ref|XM_001178779.1| PREDICTED: Strongylocentrotus purpuratus similar to fibrosurfin (LOC585896), mRNA Length = 2466 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 ccctcttcttcctcttcctct 70 ||||||||||||||||||||| Sbjct: 794 ccctcttcttcctcttcctct 774
>ref|XM_789830.2| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC590218 (LOC590218), mRNA Length = 1068 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 51 cctcttcttcctcttcctctcccct 75 |||||||||||||||||||| |||| Sbjct: 43 cctcttcttcctcttcctcttccct 19
>ref|XM_785701.2| PREDICTED: Strongylocentrotus purpuratus similar to fibrosurfin (LOC585896), mRNA Length = 2466 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 ccctcttcttcctcttcctct 70 ||||||||||||||||||||| Sbjct: 794 ccctcttcttcctcttcctct 774
>ref|NM_001065172.1| Oryza sativa (japonica cultivar-group) Os06g0727400 (Os06g0727400) mRNA, complete cds Length = 1762 Score = 42.1 bits (21), Expect = 5.9 Identities = 72/89 (80%) Strand = Plus / Plus Query: 730 ctgaagattgccatcggcgcagctcgaggacttgccttcttgcatgcatcagagaagcaa 789 ||||||||| ||| || |||||||| || ||||||||| | ||| ||||||||| || Sbjct: 831 ctgaagattctcattggtgcagctcgtggccttgccttccttcattcatcagagagacag 890 Query: 790 gccatgtaccgtgacttcaaggcttccaa 818 ||| ||| | ||||||||||||||||| Sbjct: 891 atcatctacagggacttcaaggcttccaa 919
>ref|NM_001060674.1| Oryza sativa (japonica cultivar-group) Os04g0659900 (Os04g0659900) mRNA, partial cds Length = 1691 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1298 tacatttgtaagcatgttgaa 1318 ||||||||||||||||||||| Sbjct: 1187 tacatttgtaagcatgttgaa 1167
>ref|NM_001058481.1| Oryza sativa (japonica cultivar-group) Os03g0856100 (Os03g0856100) mRNA, complete cds Length = 2392 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 cttcctcttcctctcccctcc 77 ||||||||||||||||||||| Sbjct: 81 cttcctcttcctctcccctcc 101
>gb|AC191934.1| Mus musculus BAC clone RP23-263F24 from chromosome 14, complete sequence Length = 215727 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 46 gtctccctcttcttcctcttcctct 70 |||| |||||||||||||||||||| Sbjct: 4794 gtcttcctcttcttcctcttcctct 4770
>ref|XM_001136517.1| PREDICTED: Pan troglodytes hypothetical protein LOC736548 (LOC736548), mRNA Length = 780 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 cctcttcttcctcttcctctc 71 ||||||||||||||||||||| Sbjct: 459 cctcttcttcctcttcctctc 479
>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence Length = 23011544 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1420 tatttcattttattttctctt 1440 ||||||||||||||||||||| Sbjct: 712952 tatttcattttattttctctt 712972
>gb|AC186440.3| Pan troglodytes BAC clone CH251-376N19 from chromosome unknown, complete sequence Length = 169978 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 ctcttcttcctcttcctctcc 72 ||||||||||||||||||||| Sbjct: 7788 ctcttcttcctcttcctctcc 7768
>gb|AC185975.3| Pan troglodytes BAC clone CH251-626K22 from chromosome unknown, complete sequence Length = 201158 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 ctcttcttcctcttcctctcc 72 ||||||||||||||||||||| Sbjct: 138169 ctcttcttcctcttcctctcc 138149
>gb|AC185346.3| Pan troglodytes BAC clone CH251-359P3 from chromosome unknown, complete sequence Length = 193019 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 ctcttcttcctcttcctctcc 72 ||||||||||||||||||||| Sbjct: 96262 ctcttcttcctcttcctctcc 96282
>ref|XR_006075.1| PREDICTED: Rattus norvegicus hypothetical protein LOC684987 (LOC684987), mRNA Length = 691 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 53 tcttcttcctcttcctctcccctcc 77 ||||||||||||||||| ||||||| Sbjct: 156 tcttcttcctcttcctcccccctcc 132
>ref|XM_001108464.1| PREDICTED: Macaca mulatta similar to hypoxia-inducible factor-3 alpha isoform a (LOC717188), mRNA Length = 6041 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 cctcttcttcctcttcctctc 71 ||||||||||||||||||||| Sbjct: 3073 cctcttcttcctcttcctctc 3093
>ref|XM_001089683.1| PREDICTED: Macaca mulatta hypothetical protein LOC701391 (LOC701391), mRNA Length = 171 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 ctcttcttcctcttcctctcc 72 ||||||||||||||||||||| Sbjct: 69 ctcttcttcctcttcctctcc 49
>emb|CT572985.12| Mouse DNA sequence from clone RP23-23I2 on chromosome 13, complete sequence Length = 249371 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 ctcttcttcctcttcctctcccctc 76 |||||||||||||||||| |||||| Sbjct: 76983 ctcttcttcctcttcctcacccctc 77007
>emb|CT986185.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 820 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 53 tcttcttcctcttcctctcccctcc 77 |||||||||||||||||| |||||| Sbjct: 16 tcttcttcctcttcctcttccctcc 40
>emb|CT984832.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 802 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 53 tcttcttcctcttcctctcccctcc 77 |||||||||||||||||| |||||| Sbjct: 16 tcttcttcctcttcctcttccctcc 40
>emb|CT981984.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 850 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 53 tcttcttcctcttcctctcccctcc 77 |||||||||||||||||| |||||| Sbjct: 16 tcttcttcctcttcctcttccctcc 40
>gb|AC182359.3| Spermophilus tridecemlineatus clone VMRC20-329J14, complete sequence Length = 154296 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 524 aatggcagaaatttctggttg 544 ||||||||||||||||||||| Sbjct: 82421 aatggcagaaatttctggttg 82401
>ref|NM_123946.2| Arabidopsis thaliana ATP binding / kinase/ protein serine/threonine kinase (AT5G45780) mRNA, complete cds Length = 1845 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 743 tcggcgcagctcgaggacttg 763 ||||||||||||||||||||| Sbjct: 1214 tcggcgcagctcgaggacttg 1234
>ref|NM_202049.1| Arabidopsis thaliana APK1A; kinase (APK1A) mRNA, complete cds Length = 1631 Score = 42.1 bits (21), Expect = 5.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 841 aacgcaaagctctctgattttgggcttgctaag 873 ||||||||||| |||||||||||| | |||||| Sbjct: 901 aacgcaaagctttctgattttgggttggctaag 933
>ref|NM_100631.3| Arabidopsis thaliana APK1A; kinase (APK1A) mRNA, complete cds Length = 1617 Score = 42.1 bits (21), Expect = 5.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 841 aacgcaaagctctctgattttgggcttgctaag 873 ||||||||||| |||||||||||| | |||||| Sbjct: 831 aacgcaaagctttctgattttgggttggctaag 863
>gb|AC109296.16| Mus musculus chromosome 1, clone RP24-240J15, complete sequence Length = 161257 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 tcttcttcctcttcctctccc 73 ||||||||||||||||||||| Sbjct: 61650 tcttcttcctcttcctctccc 61630
>gb|AC128647.8| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0062G19, complete sequence Length = 92392 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 cttcctcttcctctcccctcc 77 ||||||||||||||||||||| Sbjct: 57382 cttcctcttcctctcccctcc 57402
>gb|AC165357.4| Mus musculus BAC clone RP23-114G24 from chromosome 10, complete sequence Length = 216816 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 50 ccctcttcttcctcttcctctcccc 74 ||||| ||||||||||||||||||| Sbjct: 163771 ccctcctcttcctcttcctctcccc 163795 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 cctcttcttcctcttcctctc 71 ||||||||||||||||||||| Sbjct: 163862 cctcttcttcctcttcctctc 163882
>gb|AC158358.5| Mus musculus BAC clone RP23-429K3 from chromosome 14, complete sequence Length = 198706 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 46 gtctccctcttcttcctcttcctct 70 |||| |||||||||||||||||||| Sbjct: 113275 gtcttcctcttcttcctcttcctct 113251
>gb|AC165254.2| Mus musculus BAC clone RP23-285H4 from chromosome 13, complete sequence Length = 229672 Score = 42.1 bits (21), Expect = 5.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 53 tcttcttcctcttcctctcccctcc 77 ||||||||||| ||||||||||||| Sbjct: 173661 tcttcttcctcctcctctcccctcc 173637
>gb|AC117802.9| Mus musculus chromosome 15, clone RP24-560I8, complete sequence Length = 165241 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 tcttcttcctcttcctctccc 73 ||||||||||||||||||||| Sbjct: 124994 tcttcttcctcttcctctccc 125014
>ref|XM_585494.2| PREDICTED: Bos taurus similar to Collagen alpha 1(VII) chain precursor (Long-chain collagen) (LC collagen) (LOC508682), mRNA Length = 3840 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1184 gccttgccggggagcctggga 1204 ||||||||||||||||||||| Sbjct: 710 gccttgccggggagcctggga 730
>gb|AC118627.6| Mus musculus chromosome 15, clone RP24-91E8, complete sequence Length = 256158 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 tcttcttcctcttcctctccc 73 ||||||||||||||||||||| Sbjct: 195585 tcttcttcctcttcctctccc 195605
>gb|AC097832.7| Rattus norvegicus 11 BAC CH230-68C19 (Children's Hospital Oakland Research Institute) complete sequence Length = 262323 Score = 42.1 bits (21), Expect = 5.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 ccctcttcttcctcttcctct 70 ||||||||||||||||||||| Sbjct: 241390 ccctcttcttcctcttcctct 241370 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 268,747,287 Number of extensions: 15019871 Number of successful extensions: 423776 Number of sequences better than 10.0: 406 Number of HSP's gapped: 423765 Number of HSP's successfully gapped: 453 Length of query: 1544 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1521 Effective length of database: 18,503,978,556 Effective search space: 28144551383676 Effective search space used: 28144551383676 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)