ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf149o14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os05g0401200:Os05g0401200 132 6e-40
2AK105672:Os09g0127800 29 6.8
3AK103786:Os09g0127800 29 6.8
4AK058402:Os09g0127800 29 6.8

>Os05g0401200:Os05g0401200 |
          Length = 187
 Score =  132 bits (332), Expect(2) = 6e-40
 Identities = 59/60 (98%), Positives = 59/60 (98%)
 Frame = +1

Query: 985  RYSTFVNWELWWPQFPILVYFKETQTKPEGQIHFFPVIFNGRQLYDIMVERAGPSETSGP 1164
            RYSTFVNWELWWPQFPILVYFKETQTKPEGQIHFFPVIFNGRQLYD MVERAGPSETSGP
Sbjct: 127  RYSTFVNWELWWPQFPILVYFKETQTKPEGQIHFFPVIFNGRQLYDAMVERAGPSETSGP 186



 Score = 51.2 bits (121), Expect(2) = 6e-40
 Identities = 22/29 (75%), Positives = 27/29 (93%)
 Frame = +3

Query: 798 EVKVGNQLQESGENVFVGGKNRWK*AYFI 884
           EVKVG+QL+ESGENVFVGGKNRW+ + F+
Sbjct: 104 EVKVGDQLEESGENVFVGGKNRWRYSTFV 132



 Score = 74.7 bits (182), Expect = 1e-13
 Identities = 36/57 (63%), Positives = 40/57 (70%)
 Frame = +3

Query: 237 ETVVPEPDYRLPIAILGISGVFAYADNXXXXXXXXXXXXXXXFQTTRVRFVFDDDAL 407
           ET+VP+PDYRLPI ILGI+G FAYADN               FQTTRVRFVFDD+AL
Sbjct: 47  ETIVPDPDYRLPIVILGIAGAFAYADNLLAAAPVGLLGCLLLFQTTRVRFVFDDEAL 103



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>AK105672:Os09g0127800 |
          Length = 859

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -1

Query: 401 IIIKDEPNSSSLKQEKQPQQAYRCSGKKIVC 309
           +++++ PN S  K+ +Q QQ  +CSGKK  C
Sbjct: 763 MLLENNPNESQAKRARQVQQ--QCSGKKDSC 791



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>AK103786:Os09g0127800 |
          Length = 1218

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -1

Query: 401  IIIKDEPNSSSLKQEKQPQQAYRCSGKKIVC 309
            +++++ PN S  K+ +Q QQ  +CSGKK  C
Sbjct: 1122 MLLENNPNESQAKRARQVQQ--QCSGKKDSC 1150



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>AK058402:Os09g0127800 |
          Length = 503

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -1

Query: 401 IIIKDEPNSSSLKQEKQPQQAYRCSGKKIVC 309
           +++++ PN S  K+ +Q QQ  +CSGKK  C
Sbjct: 407 MLLENNPNESQAKRARQVQQ--QCSGKKDSC 435


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 36,617,672
Number of extensions: 806629
Number of successful extensions: 1907
Number of sequences better than 10.0: 4
Number of HSP's gapped: 1907
Number of HSP's successfully gapped: 6
Length of query: 455
Length of database: 15,399,855
Length adjustment: 104
Effective length of query: 351
Effective length of database: 11,235,591
Effective search space: 3943692441
Effective search space used: 3943692441
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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