| Clone Name | FLbaf149o14 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os05g33290:12005.t02924:unspliced-genomic expressed protein| Length = 4190 Score = 111 bits (237), Expect(6) = 2e-64 Identities = 40/46 (86%), Positives = 42/46 (91%) Frame = +1 / +3 Query: 964 IALHALHRYSTFVNWELWWPQFPILVYFKETQTKPEGQIHFFPVIF 1101 + + HRYSTFVNWELWWPQFPILVYFKETQTKPEGQIHFFPVIF Sbjct: 3684 LIIECTHRYSTFVNWELWWPQFPILVYFKETQTKPEGQIHFFPVIF 3821 Score = 59.3 bits (123), Expect(6) = 2e-64 Identities = 19/26 (73%), Positives = 21/26 (80%) Frame = +2 / +2 Query: 287 DIWCVCICRQSSCRCTCRPAGAASLV 364 D WC+CICRQSSC CTCRP G +S V Sbjct: 2681 DSWCICICRQSSCCCTCRPTGVSSFV 2758 Score = 57.0 bits (118), Expect(6) = 2e-64 Identities = 22/25 (88%), Positives = 25/25 (100%) Frame = +3 / +2 Query: 798 EVKVGNQLQESGENVFVGGKNRWK* 872 EVKVG+QL+ESGENVFVGGKNRW+* Sbjct: 3398 EVKVGDQLEESGENVFVGGKNRWR* 3472 Score = 51.0 bits (105), Expect(6) = 2e-64 Identities = 20/21 (95%), Positives = 20/21 (95%) Frame = +1 / +1 Query: 1102 NGRQLYDIMVERAGPSETSGP 1164 NGRQLYD MVERAGPSETSGP Sbjct: 3898 NGRQLYDAMVERAGPSETSGP 3960 Score = 41.8 bits (85), Expect(6) = 2e-64 Identities = 17/20 (85%), Positives = 18/20 (90%) Frame = +3 / +1 Query: 366 QTTRVRFVFDDDALVSALYL 425 QTTRVRFVFDD+ALV LYL Sbjct: 3118 QTTRVRFVFDDEALVCVLYL 3177 Score = 39.6 bits (80), Expect(6) = 2e-64 Identities = 14/17 (82%), Positives = 16/17 (94%) Frame = +3 / +2 Query: 237 ETVVPEPDYRLPIAILG 287 ET+VP+PDYRLPI ILG Sbjct: 2504 ETIVPDPDYRLPIVILG 2554 Score = 88.6 bits (187), Expect(6) = 4e-50 Identities = 36/39 (92%), Positives = 37/39 (94%) Frame = -1 / -2 Query: 1100 KITGKK*IWPSGFVWVSLK*TRIGNCGHHSSQFTKVEYL 984 KITGKK*I PSGFVWVSLK*T+IGNCGHHSSQFT VEYL Sbjct: 3820 KITGKK*ICPSGFVWVSLK*TKIGNCGHHSSQFTNVEYL 3704 Score = 54.7 bits (113), Expect(6) = 4e-50 Identities = 21/30 (70%), Positives = 24/30 (80%) Frame = -1 / -1 Query: 374 SSLKQEKQPQQAYRCSGKKIVCICKHTRYP 285 + L+Q+K PQ AYRCS KKIVCICK T YP Sbjct: 2768 ADLEQKKTPQ*AYRCSSKKIVCICKCTSYP 2679 Score = 53.3 bits (110), Expect(6) = 4e-50 Identities = 21/25 (84%), Positives = 22/25 (88%) Frame = -2 / -3 Query: 871 YFQRFLPPTNTFSPDSCS*LPTFTS 797 Y QRFLPPTNTFSPDS +* PTFTS Sbjct: 3471 YLQRFLPPTNTFSPDSSN*SPTFTS 3397 Score = 45.1 bits (92), Expect(6) = 4e-50 Identities = 18/27 (66%), Positives = 22/27 (81%) Frame = -1 / -1 Query: 1163 GPLVSDGPARSTIIS*SCRPLKITGKK 1083 GPLVS+GPARSTI S*SCRP + ++ Sbjct: 3959 GPLVSEGPARSTIAS*SCRPFCVATRQ 3879 Score = 36.3 bits (73), Expect(6) = 4e-50 Identities = 15/17 (88%), Positives = 15/17 (88%) Frame = -2 / -2 Query: 100 LALGGAARKRGEDNERV 50 L LGGAARK GEDNERV Sbjct: 1465 LPLGGAARKSGEDNERV 1415 Score = 32.7 bits (65), Expect(6) = 4e-50 Identities = 17/26 (65%), Positives = 18/26 (69%) Frame = -2 / -1 Query: 445 THLVYAGR*SALTRASSSKTNLTLVV 368 T + Y R* TRASSSKTN TLVV Sbjct: 3197 T*VFYLRR*RTQTRASSSKTNRTLVV 3120 Score = 81.7 bits (172), Expect(5) = 4e-39 Identities = 30/40 (75%), Positives = 35/40 (87%) Frame = -3 / -1 Query: 1101 ENHWEEMNLAFGFCLGLFEVNKDRKLWPP*FPVHKG*VPM 982 +NH EEMNL FGFCLGL E+N+DRKLWPP FP+HK *VP+ Sbjct: 3821 KNHREEMNLPFGFCLGLLEINQDRKLWPPQFPIHKC*VPV 3702 Score = 51.9 bits (107), Expect(5) = 4e-39 Identities = 19/26 (73%), Positives = 22/26 (84%) Frame = -3 / -3 Query: 363 TREAAPAGLQVQRQEDCLHMQTHQIS 286 T+E P GLQVQ+QEDCLHMQ HQ+S Sbjct: 2757 TKEDTPVGLQVQQQEDCLHMQMHQLS 2680 Score = 49.2 bits (101), Expect(5) = 4e-39 Identities = 19/27 (70%), Positives = 21/27 (77%) Frame = -3 / -1 Query: 876 MLTSNGSCHQQIRSHLTPAADCPLSLP 796 +LTSN SCH+QI HLTP D PLSLP Sbjct: 3476 LLTSNDSCHRQIHFHLTPLTDRPLSLP 3396 Score = 38.2 bits (77), Expect(5) = 4e-39 Identities = 15/21 (71%), Positives = 18/21 (85%) Frame = -3 / -3 Query: 1164 RPTCFRRSSTLHHNIIELSAI 1102 R FRRSSTLHH+II+LSA+ Sbjct: 3960 RTASFRRSSTLHHSIIKLSAV 3898 Score = 32.2 bits (64), Expect(5) = 4e-39 Identities = 13/21 (61%), Positives = 18/21 (85%) Frame = -1 / -3 Query: 425 KVECTNQGIIIKDEPNSSSLK 363 K+E TNQG+II+D+ SSSL+ Sbjct: 3177 KIENTNQGLIIEDKSYSSSLQ 3115 Score = 69.8 bits (146), Expect(5) = 5e-32 Identities = 29/38 (76%), Positives = 32/38 (84%) Frame = +3 / +2 Query: 987 VLNLCELGTMVATISYPCLLQRDPNKTRRPDSFLPSDF 1100 VLN+CELGT+VATISY L Q DPNKTRR +SFLP DF Sbjct: 3707 VLNICELGTVVATISYLGLFQGDPNKTRRANSFLPCDF 3820 Score = 46.9 bits (96), Expect(5) = 5e-32 Identities = 21/28 (75%), Positives = 21/28 (75%) Frame = +1 / +1 Query: 286 GYLVCLHMQTIFLPLHL*ACWGCFSCFR 369 G LV LHMQTIFL LHL*A WG F C R Sbjct: 2680 G*LVHLHMQTIFLLLHL*AYWGVFFCSR 2763 Score = 44.1 bits (90), Expect(5) = 5e-32 Identities = 20/26 (76%), Positives = 21/26 (80%) Frame = +1 / +3 Query: 796 RK*KWAISCRSQVRTYLLVARTVGSK 873 RK*KWAIS RSQV+ YL VAR VG K Sbjct: 3396 RK*KWAIS*RSQVKMYLSVARIVGGK 3473 Score = 36.8 bits (74), Expect(5) = 5e-32 Identities = 13/16 (81%), Positives = 13/16 (81%) Frame = +3 / +3 Query: 1107 PTTL*YYGGACWTVGN 1154 PT L* YGGACWT GN Sbjct: 3903 PTAL*CYGGACWTFGN 3950 Score = 30.9 bits (61), Expect(5) = 5e-32 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = +1 / +2 Query: 367 RLLELGSSLMMMPWLVHSTFQRKL 438 RLLE S MM PW V S F K+ Sbjct: 3119 RLLEYDLSSMMRPWFVFSIFSSKI 3190 Score = 56.1 bits (116), Expect(5) = 2e-29 Identities = 28/38 (73%), Positives = 30/38 (78%) Frame = -2 / -3 Query: 1099 KSLGRNESGLRVLFGSL*SKQG*EIVATIVPSSQRLST 986 KS GRNE LRVLFGS *+K *EIVAT VP+SQ LST Sbjct: 3819 KSQGRNEFALRVLFGSP*NKPR*EIVATTVPNSQMLST 3706 Score = 51.5 bits (106), Expect(5) = 2e-29 Identities = 21/24 (87%), Positives = 21/24 (87%) Frame = -2 / -2 Query: 364 NKRSSPSRPTGAAARRLSAYANTP 293 NKR PSRPTGAAARRLSAYAN P Sbjct: 2758 NKRRHPSRPTGAAARRLSAYANAP 2687 Score = 48.3 bits (99), Expect(5) = 2e-29 Identities = 20/26 (76%), Positives = 23/26 (88%) Frame = -1 / -2 Query: 872 LLPTVLATNKYVLT*LLQLIAHFHFL 795 L PT+LAT+KY+ T*LL LIAHFHFL Sbjct: 3472 LPPTILATDKYIFT*LL*LIAHFHFL 3395 Score = 35.0 bits (70), Expect(5) = 2e-29 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = -2 / -2 Query: 1153 FPTVQHAPP*YHRVVG 1106 FP VQHAPP*+H+ VG Sbjct: 3949 FPKVQHAPP*HHKAVG 3902 Score = 29.0 bits (57), Expect(5) = 2e-29 Identities = 14/23 (60%), Positives = 16/23 (69%) Frame = -3 / -2 Query: 435 FTLEGRVH*PGHHHQRRT*L**S 367 FT E R H PG HH+R+ L**S Sbjct: 3187 FT*EDREHKPGPHHRRQIVL**S 3119 Score = 68.0 bits (142), Expect(5) = 3e-22 Identities = 29/38 (76%), Positives = 31/38 (81%) Frame = +2 / +1 Query: 986 GTQPL*TGNYGGHNFLSLFTSKRPKQNPKARFISSQ*F 1099 GTQ L* GN GGHNFLS F S+RPKQNPK +FISS *F Sbjct: 3706 GTQHL*IGNCGGHNFLSWFISRRPKQNPKGKFISSL*F 3819 Score = 44.1 bits (90), Expect(5) = 3e-22 Identities = 19/26 (73%), Positives = 21/26 (80%) Frame = +2 / +1 Query: 797 GSESGQSAAGVR*ERICWWQEPLEVS 874 GSESG+S GVR*+ IC WQE LEVS Sbjct: 3397 GSESGRSVRGVR*KCICRWQESLEVS 3474 Score = 33.6 bits (67), Expect(5) = 3e-22 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = +2 / +2 Query: 1106 ADNSMILWWSVLDRRK 1153 AD+ M+LWWSVLD RK Sbjct: 3902 ADSFMMLWWSVLDLRK 3949 Score = 25.8 bits (50), Expect(5) = 3e-22 Identities = 9/11 (81%), Positives = 10/11 (90%) Frame = +3 / +3 Query: 285 GISGVFAYADN 317 GI+G FAYADN Sbjct: 2679 GIAGAFAYADN 2711 Score = 23.1 bits (44), Expect(5) = 3e-22 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = +2 / +3 Query: 365 SDY*S*VRL***CPG*CTLPSSV 433 +DY*S + L ** PG C+L S V Sbjct: 3117 ADY*STICLR**GPGLCSLSSQV 3185
>LOC_Os01g21820:12001.t01919:unspliced-genomic preprotein translocase secA subunit, chloroplast precursor, putative,| expressed Length = 12952 Score = 38.2 bits (77), Expect = 0.14 Identities = 17/40 (42%), Positives = 22/40 (55%) Frame = +3 / -1 Query: 1149 GNKWAWSLRQTASCAKFQEPKSMVSSLSVLTALGNLHALF 1268 G++WA L+ TA C F K SLS+L + NL A F Sbjct: 11977 GSRWA*PLKPTACCTNFNACKCSFQSLSMLLRIRNLSASF 11858
>LOC_Os03g16860:12003.t01467:unspliced-genomic heat shock cognate 70 kDa protein 2, putative, expressed| Length = 2917 Score = 37.3 bits (75), Expect = 0.26 Identities = 17/42 (40%), Positives = 21/42 (50%) Frame = +2 / -3 Query: 965 LHCTHCIGTQPL*TGNYGGHNFLSLFTSKRPKQNPKARFISS 1090 L+CT IG P GH+F SL T K+ P RF S+ Sbjct: 1106 LYCTPIIGLSPGPGSTLNGHSFASLCTDVSEKRRPMRRFASA 981
>LOC_Os05g32440:12005.t02840:unspliced-genomic expressed protein| Length = 1444 Score = 29.5 bits (58), Expect(2) = 1.4 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = +2 / +3 Query: 302 CICRQSSCRCTCRPA 346 C R SSCRC+CR A Sbjct: 285 CSTRASSCRCSCRRA 329 Score = 22.6 bits (43), Expect(2) = 1.4 Identities = 9/18 (50%), Positives = 13/18 (72%) Frame = +3 / +3 Query: 132 STANLPCMRRRSRKQQRS 185 S++ C RRRSR ++RS Sbjct: 213 SSSRSRCRRRRSRGRRRS 266
>LOC_Os03g05350:12003.t00407:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4386 Score = 32.7 bits (65), Expect(2) = 1.6 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +1 / -1 Query: 943 VLRYFLTIALHALHRYSTFVN 1005 VLR FL + LHA+H+ TF N Sbjct: 963 VLRRFLVLVLHAVHKEQTFAN 901 Score = 24.9 bits (48), Expect(2) = 1.6 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = +3 / -2 Query: 114 SAGPSWSTANLPCMRRRSRKQQRSTPIVS 200 +AGPSW A M R SR R+ + S Sbjct: 1415 TAGPSWFGAPCQQMVRPSRSNVRARVVTS 1329
>LOC_Os02g53470:12002.t04926:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4386 Score = 32.7 bits (65), Expect(2) = 1.6 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +1 / -1 Query: 943 VLRYFLTIALHALHRYSTFVN 1005 VLR FL + LHA+H+ TF N Sbjct: 963 VLRRFLVLVLHAVHKEQTFAN 901 Score = 24.9 bits (48), Expect(2) = 1.6 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = +3 / -2 Query: 114 SAGPSWSTANLPCMRRRSRKQQRSTPIVS 200 +AGPSW A M R SR R+ + S Sbjct: 1415 TAGPSWFGAPCQQMVRPSRSNVRARVVTS 1329
>LOC_Os04g56980:12004.t05166:unspliced-genomic SWIB/MDM2 domain containing protein, expressed| Length = 3931 Score = 34.5 bits (69), Expect = 1.7 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +2 / -2 Query: 296 CVCICRQSSCRCTCRPAGAAS 358 C CIC +C CTC AGA + Sbjct: 423 CCCICCNCACTCTCGMAGAGA 361
>LOC_Os04g33280:12004.t03003:unspliced-genomic expressed protein| Length = 6628 Score = 34.1 bits (68), Expect = 2.4 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = +1 / +3 Query: 922 IYLMMVKVLRYFLTIALHALHRYSTFV 1002 ++L K+++YFL +ALH LH Y F+ Sbjct: 1329 LHLHFKKMIQYFLALALHGLHCYYDFL 1409
>LOC_Os03g02080:12003.t00100:unspliced-genomic expressed protein| Length = 2968 Score = 34.1 bits (68), Expect = 2.4 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = +1 / -3 Query: 676 FFLNGASSFHNMRISFFHYSVIADDTMH 759 +FL GA SFH+MR +FFH++ +H Sbjct: 2567 YFLWGA*SFHHMRSNFFHHNAPLAKNIH 2484
>LOC_Os02g43670:12002.t03951:unspliced-genomic transferase family protein, expressed| Length = 4830 Score = 34.1 bits (68), Expect = 2.4 Identities = 14/26 (53%), Positives = 17/26 (65%) Frame = +3 / -3 Query: 123 PSWSTANLPCMRRRSRKQQRSTPIVS 200 P+ STA LP RRR R+ R+TP S Sbjct: 3262 PARSTAPLPARRRRRRRHHRATPCTS 3185
>LOC_Os09g14450:12009.t01234:unspliced-genomic pollen signalling protein with adenylyl cyclase activity, putative,| expressed Length = 5016 Score = 33.6 bits (67), Expect = 3.3 Identities = 11/29 (37%), Positives = 20/29 (68%) Frame = +1 / -3 Query: 922 IYLMMVKVLRYFLTIALHALHRYSTFVNW 1008 IYL + ++ + + +HALH+YST +N+ Sbjct: 571 IYLSLWLLMTWIFEVFMHALHKYSTLMNF 485
>LOC_Os02g45540:12002.t04141:unspliced-genomic dTDP-4-dehydrorhamnose reductase, putative, expressed| Length = 4095 Score = 33.6 bits (67), Expect = 3.3 Identities = 17/48 (35%), Positives = 21/48 (43%) Frame = -2 / +3 Query: 1258 WRFPRAVNTLNEDTIDFGSWNLAQLAVCLKDQAHLFPTVQHAPP*YHR 1115 W F R + T I GSW + A A P+VQH PP + R Sbjct: 108 WHFSRKIATRMHRRIGDGSWWITPGAAGPHHTAAASPSVQHTPPRHPR 251
>LOC_Os10g35130:12010.t02808:unspliced-genomic expressed protein| Length = 3022 Score = 33.1 bits (66), Expect = 4.5 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = +1 / +2 Query: 1252 ISMHYLKKLLQLVGCPCVATDKKNQMNQIIV 1344 +S+ L L+ L CPCVATD N N I+V Sbjct: 1286 LSVTNLVLLISLAKCPCVATDY*NSKN*ILV 1378
>LOC_Os09g39430:12009.t03408:unspliced-genomic carboxylic ester hydrolase/ hydrolase, acting on ester bonds,| putative, expressed Length = 4018 Score = 33.1 bits (66), Expect = 4.5 Identities = 9/21 (42%), Positives = 11/21 (52%) Frame = +2 / -1 Query: 275 RYTWDIWCVCICRQSSCRCTC 337 R W +W C C CRC+C Sbjct: 3127 RSRWPVWLYCNCSLRLCRCSC 3065
>LOC_Os04g21590:12004.t01891:unspliced-genomic PB1 domain containing protein, expressed| Length = 1458 Score = 33.1 bits (66), Expect = 4.5 Identities = 15/32 (46%), Positives = 18/32 (56%) Frame = +2 / +2 Query: 263 SATDRYTWDIWCVCICRQSSCRCTCRPAGAAS 358 SAT R T C C ++ RC CRP+ AAS Sbjct: 287 SATWRTTATCGASCRCSSTTRRCPCRPSPAAS 382
>LOC_Os02g15020:12002.t01295:unspliced-genomic RING-H2 finger protein ATL5H precursor, putative| Length = 570 Score = 32.7 bits (65), Expect = 6.2 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = -3 / -3 Query: 1203 PGT*HNSPSVSRTRPTCFRR 1144 PG +PS +RT PTCFRR Sbjct: 358 PGRPPGTPSTARTSPTCFRR 299
>LOC_Os01g55090:12001.t04922:unspliced-genomic transposon protein, putative, Mutator sub-class, expressed| Length = 4162 Score = 32.7 bits (65), Expect = 6.2 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = -2 / +2 Query: 1258 WRFPRAVNTLNEDTIDFGSWNLAQLAVCL 1172 W +P A + +T D +W + QLAVC+ Sbjct: 2360 WMYPMAFGFFDAETTDNWTWFMEQLAVCI 2446
>LOC_Os01g19020:12001.t01692:unspliced-genomic peroxidase 1 precursor, putative, expressed| Length = 1631 Score = 32.7 bits (65), Expect = 6.2 Identities = 14/33 (42%), Positives = 21/33 (63%) Frame = -2 / +3 Query: 418 SALTRASSSKTNLTLVV*NKRSSPSRPTGAAAR 320 +A R+++S T T + RSSPS PTG+ +R Sbjct: 1083 AASARSATSSTTPTTTTTSPRSSPSTPTGSCSR 1181
>LOC_Os06g04820:12006.t00371:unspliced-genomic leucine carboxyl methyltransferase 1, putative, expressed| Length = 5341 Score = 30.9 bits (61), Expect(2) = 6.2 Identities = 13/43 (30%), Positives = 24/43 (55%) Frame = +1 / +2 Query: 892 HQGLYCLVQLIYLMMVKVLRYFLTIALHALHRYSTFVNWELWW 1020 H +YCL+ +IY++ + + F+TI +Y+ +N L W Sbjct: 1445 HYQIYCLI*IIYIIFI*LCMPFVTIN*LNRFQYALHLNHILLW 1573 Score = 24.9 bits (48), Expect(2) = 6.2 Identities = 5/17 (29%), Positives = 9/17 (52%) Frame = +2 / +2 Query: 275 RYTWDIWCVCICRQSSC 325 +Y W +WC+ + C Sbjct: 953 QYAWKVWCIAYTYRCHC 1003
>LOC_Os02g38780:12002.t03516:unspliced-genomic protein phosphatase 2C containing protein, expressed| Length = 10174 Score = 26.7 bits (52), Expect(2) = 7.0 Identities = 13/45 (28%), Positives = 19/45 (42%) Frame = +2 / -3 Query: 206 WEKDREEDHQRNGCPRARLSATDRYTWDIWCVCICRQSSCRCTCR 340 W+ R H+ C + R D+ W C R+ C+C CR Sbjct: 9599 WQWRRP*PHRWCCCHQTRHWQWDQPRWRGRCCRHHRRCGCQCQCR 9465 Score = 22.6 bits (43), Expect(2) = 7.0 Identities = 6/8 (75%), Positives = 7/8 (87%) Frame = +2 / -3 Query: 323 CRCTCRPA 346 C+C CRPA Sbjct: 9476 CQCRCRPA 9453
>LOC_Os09g13100:12009.t01100:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3667 Score = 29.5 bits (58), Expect(2) = 8.1 Identities = 14/47 (29%), Positives = 20/47 (42%) Frame = -3 / -1 Query: 1209 LAPGT*HNSPSVSRTRPTCFRRSSTLHHNIIELSAIENHWEEMNLAF 1069 LA G H+ + P RS T+HH ++ + HW L F Sbjct: 2680 LA*GIGHHMTVLHEHAPQSLARSVTIHHEVLASIRQD*HWRGNQLFF 2540 Score = 25.4 bits (49), Expect(2) = 8.1 Identities = 10/35 (28%), Positives = 18/35 (51%) Frame = -1 / -1 Query: 1031 GNCGHHSSQFTKVEYLCNACSAIVRKYRKTFTIIR 927 G CG + FT + + + + +YR TF +I+ Sbjct: 2041 GECGLRNIFFTDAQLVISGTKINLGEYRGTFKLIK 1937
>LOC_Os12g33289:12012.t004179:unspliced-genomic expressed protein| Length = 3261 Score = 32.2 bits (64), Expect = 8.5 Identities = 13/39 (33%), Positives = 22/39 (56%) Frame = +2 / -3 Query: 1055 PKQNPKARFISSQ*FSMADNSMILWWSVLDRRKQVGLVL 1171 P K I S ADN ++LWW++ +R+++ L+L Sbjct: 1273 PPPQKKRALIICSKNSPADNMIVLWWAIQERQQRGQLLL 1157
>LOC_Os12g18630:12012.t01711:unspliced-genomic expressed protein| Length = 6220 Score = 32.2 bits (64), Expect = 8.5 Identities = 17/46 (36%), Positives = 22/46 (47%) Frame = +1 / +3 Query: 553 CWL*VWKMLTTKLSKSVMYKLPFYESLVGYRIGSY*LKH*YFFLNG 690 CW * W+ L+ S KL L+ R+ Y LK +FFL G Sbjct: 3012 CWQ*EWRFSYLDLNASQKAKLRCSPPLLEKRVHEYCLKKCFFFLFG 3149
>LOC_Os12g07750:12012.t00657:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4719 Score = 32.2 bits (64), Expect = 8.5 Identities = 14/33 (42%), Positives = 16/33 (48%) Frame = +2 / -2 Query: 206 WEKDREEDHQRNGCPRARLSATDRYTWDIWCVC 304 WE R E R GCP + L T R +WC C Sbjct: 197 WETVRCERLLRRGCPTSALRETVRCERLLWCDC 99
>LOC_Os10g41580:12010.t03392:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 2517 Score = 32.2 bits (64), Expect = 8.5 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = +3 / +2 Query: 117 AGPSWSTANLPCMRRRSRKQQRSTP 191 A PSW +A+ C RRR R ++R +P Sbjct: 1208 AAPSWRSASRGCGRRRRRGRRRRSP 1282
>LOC_Os09g20150:12009.t01749:unspliced-genomic C1-like domain containing protein| Length = 4283 Score = 32.2 bits (64), Expect = 8.5 Identities = 18/46 (39%), Positives = 23/46 (50%) Frame = -2 / -1 Query: 430 AGR*SALTRASSSKTNLTLVV*NKRSSPSRPTGAAARRLSAYANTP 293 AG A TRA S + T * R+ RP+ +ARR S A+ P Sbjct: 659 AGGTRAPTRARPSSSGTTRSA*RSRTRSGRPSSRSARRSSRSASAP 522
>LOC_Os05g48489:12005.t04283:unspliced-genomic hypothetical protein| Length = 1373 Score = 32.2 bits (64), Expect = 8.5 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = -2 / +3 Query: 202 RDTIGVLRCCFRLRLLMHGRFAVLHDGPAETTP 104 RD +G R C R RL M+G +A H+ ++P Sbjct: 252 RDGLGRRRACTRCRLPMYGSYAQAHEAGVFSSP 350
>LOC_Os05g48444:12005.t04279:unspliced-genomic hypothetical protein| Length = 1373 Score = 32.2 bits (64), Expect = 8.5 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = -2 / +3 Query: 202 RDTIGVLRCCFRLRLLMHGRFAVLHDGPAETTP 104 RD +G R C R RL M+G +A H+ ++P Sbjct: 252 RDGLGRRRACTRCRLPMYGSYAQAHEAGVFSSP 350
>LOC_Os03g64080:12003.t05622:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 15359 Score = 32.2 bits (64), Expect = 8.5 Identities = 14/38 (36%), Positives = 23/38 (60%) Frame = +1 / -3 Query: 733 SVIADDTMHVSHLKLHKFVLYRK*KWAISCRSQVRTYL 846 S + + T V++L+LH ++RK AISC Q + Y+ Sbjct: 5688 SNVIEFTCCVTNLRLHF*TIFRKVSHAISCNQQSKAYI 5575
>LOC_Os03g62700:12003.t05496:unspliced-genomic protein kinase Pti1, putative, expressed| Length = 5761 Score = 32.2 bits (64), Expect = 8.5 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +1 / -2 Query: 1249 EISMHYLKKLLQLVGCPCVATDKKN 1323 +IS K+ +LV CPCVATD+ N Sbjct: 4464 KISNQSKNKIRKLVTCPCVATDEYN 4390
>LOC_Os01g13020:12001.t01167:unspliced-genomic hypothetical protein| Length = 1237 Score = 32.2 bits (64), Expect = 8.5 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +2 / -1 Query: 290 IWCVCICRQSSCRCTCRPAGAASLV 364 I C+C+ R S C C C A A+SL+ Sbjct: 82 ICCLCLSRPSFCFCFCSVADASSLL 8
>LOC_Os09g10960:12009.t00886:unspliced-genomic SWP, putative, expressed| Length = 11395 Score = 26.7 bits (52), Expect(2) = 9.2 Identities = 10/28 (35%), Positives = 13/28 (46%) Frame = -3 / -2 Query: 1077 LAFGFCLGLFEVNKDRKLWPP*FPVHKG 994 LAF FC F + + W P +H G Sbjct: 1887 LAFNFCKARFSSSGESLFWLPISSIHNG 1804 Score = 22.1 bits (42), Expect(2) = 9.2 Identities = 6/28 (21%), Positives = 15/28 (53%) Frame = -1 / -2 Query: 974 CSAIVRKYRKTFTIIR*INWTRQYNPWC 891 C+ KY ++ ++ ++W + +P C Sbjct: 1731 CNPSCIKYSESAVCVKHVSWLERVDPSC 1648
>LOC_Os01g28750:12001.t02568:unspliced-genomic hypothetical protein| Length = 2322 Score = 29.5 bits (58), Expect(2) = 9.8 Identities = 11/17 (64%), Positives = 15/17 (88%) Frame = -1 / +1 Query: 599 DLLSFVVSIFQTYNQQF 549 D LS+VVSIFQ++ Q+F Sbjct: 196 DRLSYVVSIFQSFTQKF 246 Score = 24.4 bits (47), Expect(2) = 9.8 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = -1 / +2 Query: 509 CLNIIKQPVLEDIYISSLKYSYAFSL 432 CL + QP++ DI I + KY+ SL Sbjct: 614 CLFNMYQPIMNDIKIITNKYTSTQSL 691 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 549,130,676 Number of extensions: 9049916 Number of successful extensions: 37090 Number of sequences better than 10.0: 33 Length of query: 455 Length of database: 55,613,886 Length adjustment: 51 Effective length of query: 404 Effective length of database: 52,743,708 Effective search space: 21308458032 Effective search space used: 21308458032 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)