ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf142e17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AC140778.15| Mus musculus chromosome 1, clone RP24-446J17, co... 46 0.28
2ref|XR_020763.1| PREDICTED: Pan troglodytes ATP-binding cassette... 44 1.1
3ref|NM_080282.2| Homo sapiens ATP-binding cassette, sub-family A... 44 1.1
4gb|AE017308.1| Mycoplasma mobile 163K complete genome 44 1.1
5gb|AC131997.23| Mus musculus chromosome 15, clone RP23-381H9, co... 44 1.1
6gb|AC005050.3| Homo sapiens BAC clone CTB-30L5 from 7, complete ... 44 1.1
7gb|AY247072.1|AY247066S07 Homo sapiens ATP-binding cassette sub-... 44 1.1
8gb|AY247065.1| Homo sapiens ATP-binding cassette sub-family A me... 44 1.1
9gb|AY028900.1| Homo sapiens ATP-binding cassette A10 mRNA, compl... 44 1.1
10emb|AL139081.21| Human DNA sequence from clone RP11-179A7 on chr... 44 1.1
11gb|AC005495.2| Homo sapiens chromosome 17, clone RP11-293K20, co... 44 1.1
12gb|AC114591.15| Mus musculus chromosome 7, clone RP23-478G2, com... 44 1.1
13emb|AL845457.16| Mouse DNA sequence from clone RP23-34E24 on chr... 44 1.1
14gb|AC113245.12| Mus musculus chromosome 7, clone RP23-175D5, com... 44 1.1
15emb|Z81039.1|CEC25D7 Caenorhabditis elegans Cosmid C25D7, comple... 44 1.1
16ref|XM_001025551.1| Tetrahymena thermophila SB210 hypothetical p... 42 4.4
17ref|XM_001232671.1| PREDICTED: Gallus gallus similar to Ellis-va... 42 4.4
18gb|AC190296.5| Rhesus Macaque BAC CH250-120D8 () complete sequence 42 4.4
19gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete s... 42 4.4
20emb|CR385040.11| Zebrafish DNA sequence from clone DKEYP-101C8 i... 42 4.4
21emb|BX537123.15| Zebrafish DNA sequence from clone CH211-202M24 ... 42 4.4
22gb|AC185534.1| Drosophila melanogaster clone BACR39I04, complete... 42 4.4
23emb|BX936463.13| Zebrafish DNA sequence from clone DKEY-4G17 in ... 42 4.4
24gb|AC163354.3| Mus musculus BAC clone RP23-49E21 from chromosome... 42 4.4
25gb|AY581318.1| Gallus gallus Ellis-van Creveld syndrome 2-like p... 42 4.4
26gb|AC137839.19| Medicago truncatula clone mth2-34j11, complete s... 42 4.4
27gb|AC147483.13| Medicago truncatula clone mth2-22o7, complete se... 42 4.4
28gb|AC117600.9| Mus musculus chromosome 1, clone RP23-449C20, com... 42 4.4
29gb|AC079733.1| Arabidopsis thaliana chromosome 1 BAC T8L23 genom... 42 4.4
30gb|AC163436.3| Mus musculus chromosome 1, clone RP23-102H12, com... 42 4.4
31emb|CT009553.4| M.truncatula DNA sequence from clone MTH2-115C19... 42 4.4
32emb|BX936408.10| Zebrafish DNA sequence from clone CH211-195A15 ... 42 4.4
33dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 4.4
34emb|BX322784.3| Human DNA sequence from clone RP11-3D23 on chrom... 42 4.4
35emb|AL732586.6| Human DNA sequence from clone RP11-549H3 on chro... 42 4.4
36emb|AL589678.9| Human DNA sequence from clone RP11-74C3 on chrom... 42 4.4
37emb|AL355515.12| Human DNA sequence from clone RP4-640F2 on chro... 42 4.4
38emb|AL935262.1| Lactobacillus plantarum strain WCFS1 complete ge... 42 4.4
39emb|AL132909.1|ATT14K23 Arabidopsis thaliana DNA chromosome 3, B... 42 4.4
40gb|AC084277.3| Homo sapiens BAC clone RP11-68O1 from 4, complete... 42 4.4
41dbj|AP000616.2| Oryza sativa (japonica cultivar-group) genomic D... 42 4.4
42gb|AC109143.19| Mus musculus chromosome 1, clone RP23-105D15, co... 42 4.4
43gb|AC109197.9| Mus musculus chromosome 1, clone RP23-309A8, comp... 42 4.4
44gb|AF026294.1|RNPLII1 Rattus norvegicus placental lactogen II (r... 42 4.4

>gb|AC140778.15| Mus musculus chromosome 1, clone RP24-446J17, complete sequence
          Length = 160859
 Score = 46.1 bits (23), Expect = 0.28
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 466   aatgggagtcactgttggttctg 488
             |||||||||||||||||||||||
Sbjct: 41884 aatgggagtcactgttggttctg 41862



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>ref|XR_020763.1| PREDICTED: Pan troglodytes ATP-binding cassette, sub-family A,
           member 10 (ABCA10), mRNA
          Length = 5443

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 723 aaatgttgcaaaagaaagaggaaaatttaa 752
           |||||||||||  |||||||||||||||||
Sbjct: 432 aaatgttgcaagggaaagaggaaaatttaa 461



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>ref|NM_080282.2| Homo sapiens ATP-binding cassette, sub-family A (ABC1), member 10
            (ABCA10), mRNA
          Length = 6348

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 723  aaatgttgcaaaagaaagaggaaaatttaa 752
            |||||||||||  |||||||||||||||||
Sbjct: 1338 aaatgttgcaagggaaagaggaaaatttaa 1367



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>gb|AE017308.1| Mycoplasma mobile 163K complete genome
          Length = 777079

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 783    attttaatacagaagaaattga 804
              ||||||||||||||||||||||
Sbjct: 263939 attttaatacagaagaaattga 263918



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>gb|AC131997.23| Mus musculus chromosome 15, clone RP23-381H9, complete sequence
          Length = 194206

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 209    gtactgaaaacatgaccaaaga 230
              ||||||||||||||||||||||
Sbjct: 151816 gtactgaaaacatgaccaaaga 151837



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>gb|AC005050.3| Homo sapiens BAC clone CTB-30L5 from 7, complete sequence
          Length = 188374

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 814   ccttgtaaatgaatttaaaaatacaataaacact 847
             ||||| ||||||| | ||||||||||||||||||
Sbjct: 87104 ccttggaaatgaaataaaaaatacaataaacact 87071



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>gb|AY247072.1|AY247066S07 Homo sapiens ATP-binding cassette sub-family A member 10 (ABCA10)
           gene, exon 7
          Length = 247

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 723 aaatgttgcaaaagaaagaggaaaatttaa 752
           |||||||||||  |||||||||||||||||
Sbjct: 166 aaatgttgcaagggaaagaggaaaatttaa 195



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>gb|AY247065.1| Homo sapiens ATP-binding cassette sub-family A member 10 (ABCA10)
            mRNA, complete cds
          Length = 6333

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 723  aaatgttgcaaaagaaagaggaaaatttaa 752
            |||||||||||  |||||||||||||||||
Sbjct: 1369 aaatgttgcaagggaaagaggaaaatttaa 1398



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>gb|AY028900.1| Homo sapiens ATP-binding cassette A10 mRNA, complete cds
          Length = 6181

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 723  aaatgttgcaaaagaaagaggaaaatttaa 752
            |||||||||||  |||||||||||||||||
Sbjct: 1338 aaatgttgcaagggaaagaggaaaatttaa 1367



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>emb|AL139081.21| Human DNA sequence from clone RP11-179A7 on chromosome 13 Contains parts
              of 2 novel genes and the RFC3 gene for replication factor C
              (activator 1) 3, 38kDa, complete sequence
          Length = 185602

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 840    taaacactgtttcttattctga 861
              ||||||||||||||||||||||
Sbjct: 153793 taaacactgtttcttattctga 153772



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>gb|AC005495.2| Homo sapiens chromosome 17, clone RP11-293K20, complete sequence
          Length = 185252

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 723    aaatgttgcaaaagaaagaggaaaatttaa 752
              |||||||||||  |||||||||||||||||
Sbjct: 139571 aaatgttgcaagggaaagaggaaaatttaa 139542



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>gb|AC114591.15| Mus musculus chromosome 7, clone RP23-478G2, complete sequence
          Length = 212299

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 826    atttaaaaatacaataaacactgtttctta 855
              ||||| |||||||||||||||| |||||||
Sbjct: 189878 atttataaatacaataaacactttttctta 189907



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>emb|AL845457.16| Mouse DNA sequence from clone RP23-34E24 on chromosome 2, complete
              sequence
          Length = 221009

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 818    gtaaatgaatttaaaaatacaa 839
              ||||||||||||||||||||||
Sbjct: 211471 gtaaatgaatttaaaaatacaa 211450



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>gb|AC113245.12| Mus musculus chromosome 7, clone RP23-175D5, complete sequence
          Length = 213428

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 826   atttaaaaatacaataaacactgtttctta 855
             ||||| |||||||||||||||| |||||||
Sbjct: 45360 atttataaatacaataaacactttttctta 45389



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>emb|Z81039.1|CEC25D7 Caenorhabditis elegans Cosmid C25D7, complete sequence
          Length = 42361

 Score = 44.1 bits (22), Expect = 1.1
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 941   gattttcgtgccgaaatagagaaatt 966
             ||||||||||| ||||||||||||||
Sbjct: 25222 gattttcgtgctgaaatagagaaatt 25247



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>ref|XM_001025551.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_01020740)
            mRNA, complete cds
          Length = 3948

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 829  taaaaatacaataaacactgt 849
            |||||||||||||||||||||
Sbjct: 2037 taaaaatacaataaacactgt 2017



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>ref|XM_001232671.1| PREDICTED: Gallus gallus similar to Ellis-van Creveld syndrome 2-like
            protein (LOC770095), mRNA
          Length = 3936

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 722  aaaatgttgcaaaagaaagag 742
            |||||||||||||||||||||
Sbjct: 2035 aaaatgttgcaaaagaaagag 2055



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>gb|AC190296.5| Rhesus Macaque  BAC CH250-120D8 () complete sequence
          Length = 169365

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 825   aatttaaaaatacaataaaca 845
             |||||||||||||||||||||
Sbjct: 20798 aatttaaaaatacaataaaca 20778



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>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence
          Length = 23011544

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 716      atagcaaaaatgttgcaaaag 736
                |||||||||||||||||||||
Sbjct: 22646932 atagcaaaaatgttgcaaaag 22646952



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>emb|CR385040.11| Zebrafish DNA sequence from clone DKEYP-101C8 in linkage group 12,
             complete sequence
          Length = 170728

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 823   tgaatttaaaaatacaataaa 843
             |||||||||||||||||||||
Sbjct: 98791 tgaatttaaaaatacaataaa 98811



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>emb|BX537123.15| Zebrafish DNA sequence from clone CH211-202M24 in linkage group 13,
              complete sequence
          Length = 202967

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 828    ttaaaaatacaataaacactgtttc 852
              ||||||||||| |||||||||||||
Sbjct: 165062 ttaaaaatacagtaaacactgtttc 165038



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>gb|AC185534.1| Drosophila melanogaster clone BACR39I04, complete sequence
          Length = 119461

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 716   atagcaaaaatgttgcaaaag 736
             |||||||||||||||||||||
Sbjct: 68130 atagcaaaaatgttgcaaaag 68150



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>emb|BX936463.13| Zebrafish DNA sequence from clone DKEY-4G17 in linkage group 17,
             complete sequence
          Length = 232846

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 745   aaatttaattgaacaagtcattgaaatttcgttgaaa 781
             ||||||||||||| |  ||||||||||||| ||||||
Sbjct: 47301 aaatttaattgaaaacttcattgaaatttcattgaaa 47265



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>gb|AC163354.3| Mus musculus BAC clone RP23-49E21 from chromosome 12, complete sequence
          Length = 248060

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 729    tgcaaaagaaagaggaaaatt 749
              |||||||||||||||||||||
Sbjct: 172749 tgcaaaagaaagaggaaaatt 172729



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>gb|AY581318.1| Gallus gallus Ellis-van Creveld syndrome 2-like protein mRNA,
            complete cds
          Length = 3955

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 722  aaaatgttgcaaaagaaagag 742
            |||||||||||||||||||||
Sbjct: 2050 aaaatgttgcaaaagaaagag 2070



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>gb|AC137839.19| Medicago truncatula clone mth2-34j11, complete sequence
          Length = 145073

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 728    ttgcaaaagaaagaggaaaat 748
              |||||||||||||||||||||
Sbjct: 106904 ttgcaaaagaaagaggaaaat 106884



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>gb|AC147483.13| Medicago truncatula clone mth2-22o7, complete sequence
          Length = 142205

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 728   ttgcaaaagaaagaggaaaat 748
             |||||||||||||||||||||
Sbjct: 35306 ttgcaaaagaaagaggaaaat 35326



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>gb|AC117600.9| Mus musculus chromosome 1, clone RP23-449C20, complete sequence
          Length = 195848

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1064   aatgacttgttggagaaagaa 1084
              |||||||||||||||||||||
Sbjct: 164442 aatgacttgttggagaaagaa 164462



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>gb|AC079733.1| Arabidopsis thaliana chromosome 1 BAC T8L23 genomic sequence, complete
             sequence
          Length = 90448

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 865   aaaacttgatgaacaaggaaa 885
             |||||||||||||||||||||
Sbjct: 58950 aaaacttgatgaacaaggaaa 58930



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>gb|AC163436.3| Mus musculus chromosome 1, clone RP23-102H12, complete sequence
          Length = 198253

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1016  ttgcttggatgtaagcttggc 1036
             |||||||||||||||||||||
Sbjct: 20807 ttgcttggatgtaagcttggc 20787



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>emb|CT009553.4| M.truncatula DNA sequence from clone MTH2-115C19 on chromosome 3,
             complete sequence
          Length = 125987

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 728   ttgcaaaagaaagaggaaaat 748
             |||||||||||||||||||||
Sbjct: 19506 ttgcaaaagaaagaggaaaat 19526



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>emb|BX936408.10| Zebrafish DNA sequence from clone CH211-195A15 in linkage group 17,
              complete sequence
          Length = 198387

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                   
Query: 745    aaatttaattgaacaagtcattgaaatttcgttgaaa 781
              ||||||||||||| |  ||||||||||||| ||||||
Sbjct: 155587 aaatttaattgaaaacttcattgaaatttcattgaaa 155623



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 827    tttaaaaatacaataaacact 847
              |||||||||||||||||||||
Sbjct: 486819 tttaaaaatacaataaacact 486839



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>emb|BX322784.3| Human DNA sequence from clone RP11-3D23 on chromosome X Contains a
             Sjogren syndrome antigen B (autoantigen La) (SSB)
             pseudogene, complete sequence
          Length = 169147

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 287   atggccaccgtcaaaaatggt 307
             |||||||||||||||||||||
Sbjct: 89220 atggccaccgtcaaaaatggt 89240



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>emb|AL732586.6| Human DNA sequence from clone RP11-549H3 on chromosome X, complete
             sequence
          Length = 125933

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 823   tgaatttaaaaatacaataaa 843
             |||||||||||||||||||||
Sbjct: 62784 tgaatttaaaaatacaataaa 62764



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>emb|AL589678.9| Human DNA sequence from clone RP11-74C3 on chromosome 9 Contains the
            3' end of a novel gene, complete sequence
          Length = 134922

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 826  atttaaaaatacaataaacac 846
            |||||||||||||||||||||
Sbjct: 7909 atttaaaaatacaataaacac 7929



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>emb|AL355515.12| Human DNA sequence from clone RP4-640F2 on chromosome 1 Contains the 5'
             end of a novel gene (KIAA1573), complete sequence
          Length = 105208

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 782   cattttaatacagaagaaatt 802
             |||||||||||||||||||||
Sbjct: 62321 cattttaatacagaagaaatt 62341



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>emb|AL935262.1| Lactobacillus plantarum strain WCFS1 complete genome; segment 11/11
          Length = 304274

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 870    ttgatgaacaaggaaaaattg 890
              |||||||||||||||||||||
Sbjct: 274495 ttgatgaacaaggaaaaattg 274475



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>emb|AL132909.1|ATT14K23 Arabidopsis thaliana DNA chromosome 3, BAC clone T14K23
          Length = 101786

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 821   aatgaatttaaaaatacaataaaca 845
             |||||||||||||||| ||||||||
Sbjct: 16978 aatgaatttaaaaataaaataaaca 16954



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>gb|AC084277.3| Homo sapiens BAC clone RP11-68O1 from 4, complete sequence
          Length = 150705

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 509    ctcgaaaatcctcacaaagca 529
              |||||||||||||||||||||
Sbjct: 116340 ctcgaaaatcctcacaaagca 116320



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>dbj|AP000616.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
             clone:P0514G12
          Length = 138929

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 827   tttaaaaatacaataaacact 847
             |||||||||||||||||||||
Sbjct: 32327 tttaaaaatacaataaacact 32347



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>gb|AC109143.19| Mus musculus chromosome 1, clone RP23-105D15, complete sequence
          Length = 211924

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1064   aatgacttgttggagaaagaa 1084
              |||||||||||||||||||||
Sbjct: 186753 aatgacttgttggagaaagaa 186733



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>gb|AC109197.9| Mus musculus chromosome 1, clone RP23-309A8, complete sequence
          Length = 255342

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1016 ttgcttggatgtaagcttggc 1036
            |||||||||||||||||||||
Sbjct: 4819 ttgcttggatgtaagcttggc 4839



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>gb|AF026294.1|RNPLII1 Rattus norvegicus placental lactogen II (rPLII) gene, 5' flanking
            region and exon 1
          Length = 4053

 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 722  aaaatgttgcaaaagaaagag 742
            |||||||||||||||||||||
Sbjct: 2307 aaaatgttgcaaaagaaagag 2327



 Score = 42.1 bits (21), Expect = 4.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 722  aaaatgttgcaaaagaaagag 742
            |||||||||||||||||||||
Sbjct: 3072 aaaatgttgcaaaagaaagag 3092


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 237,020,398
Number of extensions: 14363692
Number of successful extensions: 306513
Number of sequences better than 10.0: 44
Number of HSP's gapped: 306513
Number of HSP's successfully gapped: 45
Length of query: 1162
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1139
Effective length of database: 18,503,978,556
Effective search space: 21076031575284
Effective search space used: 21076031575284
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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